Metagenome Family F097866

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097866
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	44 residues
Representative Sequence	MPSEVSTIGGDQSGEELRRELAEAREQQAATAEILAAVSNSPT
Number of Associated Samples	58
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	95.19 %
% of genes near scaffold ends (potentially truncated)	97.12 %
% of genes from short scaffolds (< 2000 bps)	89.42 %
Associated GOLD sequencing projects	54
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.885 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (29.808 % of family members)
Environment Ontology (ENVO)	Unclassified (50.962 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.077 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.70% β-sheet: 0.00% Coil/Unstructured: 49.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00589	Phage_integrase	2.88
PF04986	Y2_Tnp	1.92
PF01757	Acyl_transf_3	1.92
PF00561	Abhydrolase_1	1.92
PF13191	AAA_16	0.96
PF07729	FCD	0.96
PF04392	ABC_sub_bind	0.96
PF00078	RVT_1	0.96
PF12680	SnoaL_2	0.96
PF13482	RNase_H_2	0.96
PF05598	DUF772	0.96
PF04879	Molybdop_Fe4S4	0.96
PF00344	SecY	0.96
PF03050	DDE_Tnp_IS66	0.96
PF14319	Zn_Tnp_IS91	0.96
PF13701	DDE_Tnp_1_4	0.96
PF02371	Transposase_20	0.96
PF03446	NAD_binding_2	0.96
PF14317	YcxB	0.96
PF01695	IstB_IS21	0.96
PF13649	Methyltransf_25	0.96
PF07883	Cupin_2	0.96
PF05231	MASE1	0.96
PF00884	Sulfatase	0.96
PF13185	GAF_2	0.96
PF00817	IMS	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.96
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.96
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.96
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	0.96
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.96
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.96
COG0201	Preprotein translocase subunit SecY	Intracellular trafficking, secretion, and vesicular transport [U]	0.96
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	0.96
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.96
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.96
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.88 %
All Organisms	root	All Organisms	47.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.88 %
cellular organisms	root	All Organisms → cellular organisms	47.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.88 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.73 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.88 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.92 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.88 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17.31 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	2.88 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.92 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.88 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	4.81 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	2.88 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.92 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.96 %
Roseiarcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae	0.96 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.88 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2.88 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	2.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.92 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	1.92 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	1.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.96 %
Roseiarcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus	0.96 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.88 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	2.88 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2.88 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	1.92 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
Bradyrhizobium canariense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	0.96 %
unclassified Microvirga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga	0.96 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.96 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	0.96 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.88 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2.88 %
unclassified Rhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium	1.92 %
Sinorhizobium meliloti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	1.92 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
Microvirga sp. KLBC 81	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. KLBC 81	0.96 %
Bradyrhizobium canariense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	0.96 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.96 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	0.96 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.88 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2.88 %
Rhizobium sp. IBUN	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. IBUN	1.92 %
Sinorhizobium meliloti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	1.92 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
Microvirga sp. KLBC 81	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. KLBC 81	0.96 %
Bradyrhizobium canariense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	0.96 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.96 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	0.96 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0522483	Not Available	1116	Open in IMG/M
3300000789\|JGI1027J11758_11175980	Not Available	517	Open in IMG/M
3300000955\|JGI1027J12803_104360296	Not Available	539	Open in IMG/M
3300004633\|Ga0066395_10436141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	744	Open in IMG/M
3300004633\|Ga0066395_11025231	All Organisms → cellular organisms → Bacteria → Proteobacteria	504	Open in IMG/M
3300005332\|Ga0066388_100014044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6528	Open in IMG/M
3300005332\|Ga0066388_101165843	All Organisms → cellular organisms → Bacteria → Proteobacteria	1313	Open in IMG/M
3300005332\|Ga0066388_101720455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	1111	Open in IMG/M
3300005332\|Ga0066388_106098993	Not Available	609	Open in IMG/M
3300005332\|Ga0066388_108848001	Not Available	500	Open in IMG/M
3300005713\|Ga0066905_100092273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2028	Open in IMG/M
3300005713\|Ga0066905_100502173	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300005713\|Ga0066905_101858528	Not Available	556	Open in IMG/M
3300005713\|Ga0066905_102002268	Not Available	537	Open in IMG/M
3300005713\|Ga0066905_102179760	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300005713\|Ga0066905_102233793	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300005764\|Ga0066903_100426451	All Organisms → cellular organisms → Bacteria	2200	Open in IMG/M
3300005764\|Ga0066903_100438652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2174	Open in IMG/M
3300005764\|Ga0066903_100951150	Not Available	1563	Open in IMG/M
3300005764\|Ga0066903_100969985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1549	Open in IMG/M
3300005764\|Ga0066903_103259550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	877	Open in IMG/M
3300005764\|Ga0066903_103331969	Not Available	868	Open in IMG/M
3300005764\|Ga0066903_105208345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	688	Open in IMG/M
3300006173\|Ga0070716_101731935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	516	Open in IMG/M
3300006755\|Ga0079222_10813363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	766	Open in IMG/M
3300006796\|Ga0066665_10742937	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300006904\|Ga0075424_102195268	Not Available	581	Open in IMG/M
3300006904\|Ga0075424_102830982	Not Available	505	Open in IMG/M
3300009100\|Ga0075418_10359877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1554	Open in IMG/M
3300009156\|Ga0111538_10837455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1165	Open in IMG/M
3300009156\|Ga0111538_13907324	Not Available	515	Open in IMG/M
3300009156\|Ga0111538_14135519	Not Available	501	Open in IMG/M
3300009792\|Ga0126374_11060379	Not Available	640	Open in IMG/M
3300009792\|Ga0126374_11343989	Not Available	579	Open in IMG/M
3300009792\|Ga0126374_11810348	Not Available	511	Open in IMG/M
3300010046\|Ga0126384_10154183	All Organisms → cellular organisms → Bacteria	1772	Open in IMG/M
3300010046\|Ga0126384_10912758	Not Available	794	Open in IMG/M
3300010047\|Ga0126382_10066350	Not Available	2191	Open in IMG/M
3300010047\|Ga0126382_10110822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1797	Open in IMG/M
3300010047\|Ga0126382_10730208	Not Available	835	Open in IMG/M
3300010047\|Ga0126382_11698537	Not Available	589	Open in IMG/M
3300010047\|Ga0126382_12075289	Not Available	543	Open in IMG/M
3300010358\|Ga0126370_11674612	Not Available	611	Open in IMG/M
3300010359\|Ga0126376_12854079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	533	Open in IMG/M
3300010360\|Ga0126372_10208613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1635	Open in IMG/M
3300010360\|Ga0126372_12339498	Not Available	584	Open in IMG/M
3300010360\|Ga0126372_13245948	Not Available	506	Open in IMG/M
3300010361\|Ga0126378_11787867	All Organisms → cellular organisms → Bacteria → Proteobacteria	699	Open in IMG/M
3300010361\|Ga0126378_12774661	Not Available	559	Open in IMG/M
3300010362\|Ga0126377_11033400	Not Available	889	Open in IMG/M
3300010362\|Ga0126377_12498809	Not Available	592	Open in IMG/M
3300010362\|Ga0126377_13334989	Not Available	519	Open in IMG/M
3300010366\|Ga0126379_12795181	Not Available	584	Open in IMG/M
3300010366\|Ga0126379_12895438	Not Available	574	Open in IMG/M
3300010398\|Ga0126383_10095059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	2645	Open in IMG/M
3300010398\|Ga0126383_10473914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1306	Open in IMG/M
3300010398\|Ga0126383_11942130	Not Available	676	Open in IMG/M
3300010399\|Ga0134127_11658477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. IBUN	714	Open in IMG/M
3300012948\|Ga0126375_10024695	All Organisms → cellular organisms → Bacteria → Proteobacteria	2871	Open in IMG/M
3300012948\|Ga0126375_10279166	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300012948\|Ga0126375_10518071	Not Available	893	Open in IMG/M
3300012971\|Ga0126369_10891162	Not Available	975	Open in IMG/M
3300012971\|Ga0126369_12818054	Not Available	569	Open in IMG/M
3300013306\|Ga0163162_11662733	Not Available	729	Open in IMG/M
3300016294\|Ga0182041_12267655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. KLBC 81	508	Open in IMG/M
3300016319\|Ga0182033_11999886	Not Available	528	Open in IMG/M
3300016319\|Ga0182033_12181825	Not Available	505	Open in IMG/M
3300016357\|Ga0182032_11041468	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	700	Open in IMG/M
3300016371\|Ga0182034_11732283	Not Available	550	Open in IMG/M
3300016404\|Ga0182037_10033781	All Organisms → cellular organisms → Bacteria	3281	Open in IMG/M
3300016404\|Ga0182037_10685743	Not Available	876	Open in IMG/M
3300016404\|Ga0182037_10815381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	805	Open in IMG/M
3300016445\|Ga0182038_11972633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. IBUN	528	Open in IMG/M
3300017947\|Ga0187785_10404945	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300017970\|Ga0187783_11260368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	533	Open in IMG/M
3300018060\|Ga0187765_10302717	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300021478\|Ga0210402_10924580	Not Available	799	Open in IMG/M
3300021560\|Ga0126371_13152759	Not Available	558	Open in IMG/M
3300025929\|Ga0207664_11386389	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300031543\|Ga0318516_10360165	Not Available	839	Open in IMG/M
3300031668\|Ga0318542_10232626	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	935	Open in IMG/M
3300031679\|Ga0318561_10591680	Not Available	611	Open in IMG/M
3300031682\|Ga0318560_10324770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	830	Open in IMG/M
3300031724\|Ga0318500_10220268	Not Available	914	Open in IMG/M
3300031740\|Ga0307468_100586885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	906	Open in IMG/M
3300031744\|Ga0306918_10696966	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	795	Open in IMG/M
3300031744\|Ga0306918_11559393	Not Available	504	Open in IMG/M
3300031747\|Ga0318502_10863043	Not Available	550	Open in IMG/M
3300031833\|Ga0310917_10912759	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	591	Open in IMG/M
3300031845\|Ga0318511_10479105	Not Available	575	Open in IMG/M
3300031946\|Ga0310910_11480763	Not Available	521	Open in IMG/M
3300031947\|Ga0310909_10089367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2457	Open in IMG/M
3300031947\|Ga0310909_11465147	Not Available	545	Open in IMG/M
3300031954\|Ga0306926_12063571	Not Available	639	Open in IMG/M
3300032001\|Ga0306922_10618984	Not Available	1146	Open in IMG/M
3300032059\|Ga0318533_10053128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2700	Open in IMG/M
3300032059\|Ga0318533_10165241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1572	Open in IMG/M
3300032059\|Ga0318533_10974673	Not Available	622	Open in IMG/M
3300032059\|Ga0318533_11018240	Not Available	607	Open in IMG/M
3300032066\|Ga0318514_10708772	Not Available	535	Open in IMG/M
3300032076\|Ga0306924_10501032	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300032261\|Ga0306920_100283846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2468	Open in IMG/M
3300032261\|Ga0306920_103058716	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300033290\|Ga0318519_10864511	Not Available	558	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.31%
Host-Associated	Host-Associated	6.73%
Engineered	Engineered	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.31%
Plants	Host-Associated → Plants	6.73%
Solid Waste	Engineered → Solid Waste	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.96%
Grass	Engineered → Solid Waste → Grass	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.27%
Loam	Environmental → Terrestrial → Soil → Loam	21.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.96%
Composting	Engineered → Solid Waste → Grass → Composting	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.96%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.96%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	29.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	19.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_05224833	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MPSETSVVSGDPSIEELGCELAEAREQQAATARILAVISSSSSDPSRVLAEIAAS
JGI1027J11758_111759801	3300000789	Soil	MPSEPSTVGGNKSVEELRCELAEARRREGATAEILRV
JGI1027J12803_1043602962	3300000955	Soil	MPSEPSTVGGNKSVEELRCELAEARRREGATAEILRVISRSPTDL
Ga0066395_104361411	3300004633	Tropical Forest Soil	MPSEVSTASGGQSVEALRQELAEAREQQAATAEVLRVISSSPM
Ga0066395_110252312	3300004633	Tropical Forest Soil	MSSEVSTVTGEQSVEELRRELAERREQQAATAEILASISS
Ga0066388_1000140447	3300005332	Tropical Forest Soil	MSPEASTMGGDQSVEELRCELAEARRELAEAQEQQTATAGILAALSSSPADL
Ga0066388_1011658433	3300005332	Tropical Forest Soil	MPSEVSTIGGDQSLEELRRELTEAREQQAVTAAILTAISNSPIDSYRVFAE
Ga0066388_1017204552	3300005332	Tropical Forest Soil	MPSDLSTATGELSVEALRRELAEARERELATAEILRVISS
Ga0066388_1060989932	3300005332	Tropical Forest Soil	MD*VLPMTSDASTVTGDRSVEASRRELAEAREQQAATAEILATISSSVTDANQVFAKIAA
Ga0066388_1088480012	3300005332	Tropical Forest Soil	MSTEASTTGDDRSVEELRRELTEAREQQAATAEILAAISSS
Ga0066905_1000922733	3300005713	Tropical Forest Soil	MPSEASTVGGNHSAEELRRELTEAREQQAATAEILRVISSSSMDLQ
Ga0066905_1005021731	3300005713	Tropical Forest Soil	MPSEVSTVAGDQSLEALRRELAEVREQQAATAEILASISSSVTDANQVFAKIAAS
Ga0066905_1018585281	3300005713	Tropical Forest Soil	MPSQASVAGGDQSMEELKRELAEAREQQAATAGILAAISNSPADQSRVFAEIA
Ga0066905_1020022681	3300005713	Tropical Forest Soil	MSHEASTVRGDQSVDELRRELAEAREQQAATAEILWVI
Ga0066905_1021797601	3300005713	Tropical Forest Soil	MPSEVSTVGGDQSVEEVRRELAEAREQQAATAEILAAISNAPTDPSCV
Ga0066905_1022337932	3300005713	Tropical Forest Soil	MSSEVSTVADDQSVEALRRELAEARQQQAATAEILASISSSVTDA
Ga0066903_1004264511	3300005764	Tropical Forest Soil	MSSEVSTVTGEQSVEELRRELAELREQQAATAEILASISSSVTD
Ga0066903_1004386521	3300005764	Tropical Forest Soil	MSREASTVGSDQSVEELKRELAESRDQQAATAEILRVISSSP
Ga0066903_1009511501	3300005764	Tropical Forest Soil	MPSEVSTLGRGQSMEELRRELAEAREQLATTAGILAAISNSPTDAYRVFAE
Ga0066903_1009699851	3300005764	Tropical Forest Soil	MSPEASTVGSDQSVEELKRELAESRDQQAATAEILRVISSSP
Ga0066903_1032595503	3300005764	Tropical Forest Soil	MDWMETMPSKVSTVGGNQSVDELRRELAEAREQQAAT
Ga0066903_1033319691	3300005764	Tropical Forest Soil	MSPEASTFGGEQSVEELRRELAEARGREAATSEILALISRSPMELQG
Ga0066903_1052083451	3300005764	Tropical Forest Soil	MSPGASTIGGDQSVEDLRRELAEARAQQAATSEILRV
Ga0070716_1017319351	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPPDTSSVSADQSVEELRRELAAAREQQAAASAVLRAISASRGD
Ga0079222_108133632	3300006755	Agricultural Soil	MPSEVSTVTGEQSVEALRRELAEARVQQAATVEILASISSSVTDANQVF
Ga0066665_107429372	3300006796	Soil	MPSEVSTVSGDQLVEGLRRELAEAREQQAATAEILAAISNSPTD
Ga0075424_1021952683	3300006904	Populus Rhizosphere	MPSEVSTFRGDQSVEELRRELAEAWEQQTATADILRVIS
Ga0075424_1028309821	3300006904	Populus Rhizosphere	MAPELTTVGGDQSLQELRRELAEAREQQATTAEIL
Ga0075418_103598773	3300009100	Populus Rhizosphere	MPSAVATISGARSVEELKRELAEAREQQAATAEILRVISNSP
Ga0111538_108374552	3300009156	Populus Rhizosphere	MPPEASTVSGDQLMEDLRRELAEAREQLTATAGILAAISNSPTGADRVFTEIAA
Ga0111538_139073242	3300009156	Populus Rhizosphere	MAPEVSTVSGDQLVEELRRELADAPEQQAATAEILRVLSGSPMD
Ga0111538_141355191	3300009156	Populus Rhizosphere	MPTEISTDRSDQSVQELRRELAEAREQQAASAEILRVIS
Ga0126374_110603792	3300009792	Tropical Forest Soil	MPPELSTVHGDQSVEDLKRELAEAREQQAATAEILRVISSSP
Ga0126374_113439891	3300009792	Tropical Forest Soil	MPSETSTACAGQSVEELRRELAEVREQQAATAGILAAMSNSPTDPFRAFADIA
Ga0126374_118103482	3300009792	Tropical Forest Soil	MSPEASTIGGEQSVEELRRELAEARGREAATSEILALISRSPMELQGAFAEVAA
Ga0126384_101541832	3300010046	Tropical Forest Soil	MPSEVSAATGDQSAEELRRELAGAREQQAATAEILAAISS
Ga0126384_109127582	3300010046	Tropical Forest Soil	MPSETSTFCADQSVEELRHELAEARQQQAATAGILAAIPNSSGNPYRVLTDIAVSAASLCDSY
Ga0126382_100663501	3300010047	Tropical Forest Soil	MPSDVSTVMGDRSVEALRHELAEARELQAATRAVLGAISNSPTDSARV
Ga0126382_101108225	3300010047	Tropical Forest Soil	MPSETSVVSGDQSIEGLGRELAEAREQQAVTAEILAAISSSPSDPSRVFA
Ga0126382_107302081	3300010047	Tropical Forest Soil	MPSEVSAVGGDQWVEELRRELAEAREQQAATAEIL
Ga0126382_116985372	3300010047	Tropical Forest Soil	MPSEASVISGDQSIEELRRELAEAREQQAATAGIEFAH*
Ga0126382_120752891	3300010047	Tropical Forest Soil	MSPEVSTVGGEQSVQELRRELAEAREQLAATAGILAAISN
Ga0126370_116746121	3300010358	Tropical Forest Soil	MPSEVSTHSADQSVEELRRELADAREQQTATAEILRVISSL
Ga0126376_128540791	3300010359	Tropical Forest Soil	MPSQVPTAFDHQSVEQLRRELAEAREQQAATAEMLRVISSSPMDLQR
Ga0126372_102086131	3300010360	Tropical Forest Soil	MDWMETMPSKVSTVGGNQSVDELRRELAEAREQQAATTE
Ga0126372_123394981	3300010360	Tropical Forest Soil	MQPEAAVVSGDQSMEELRRELAEARDQQAATSEILKVISSSPTD
Ga0126372_132459481	3300010360	Tropical Forest Soil	MPSEVSTFSGDQSMEELVRELAEAREQQGATAEILRVI
Ga0126378_117878671	3300010361	Tropical Forest Soil	MLPEASTIGGDQSAEQLSRELAEAREQQTATAEILR
Ga0126378_127746611	3300010361	Tropical Forest Soil	MPSEVSTFSGDQSMEELVRELAEAREQQGATAEILRVISSSPMD
Ga0126377_110334002	3300010362	Tropical Forest Soil	MSPNVSTLDGNQSADEFKRELAEAREQQAATAEILRVIS
Ga0126377_124988092	3300010362	Tropical Forest Soil	MPSKVLTGAGDQSVEALRRELAEARAQQAATAEILASISSSVTDASQVF
Ga0126377_133349892	3300010362	Tropical Forest Soil	MPPEVSTVSGDQSVEELRRALAEAQEQQAATAGILAAMSSSPTDPHRVFTDIAAS
Ga0126379_127951811	3300010366	Tropical Forest Soil	MPSEGLIVSGDQSVEELRRDLADAREQQVATAEILRVIS
Ga0126379_128954382	3300010366	Tropical Forest Soil	MSPEPSIIGGDQSVEELRRELAEAREHQAATAEILRVIS
Ga0126383_100950594	3300010398	Tropical Forest Soil	MSPKASTLDGNQSADEFKRELAEAREQQAATAEILRVISNAP
Ga0126383_104739141	3300010398	Tropical Forest Soil	MPSEVSTFRGDQSVEELRLELAEAREQQAATAAILAAIPNSPIDSYRV
Ga0126383_119421301	3300010398	Tropical Forest Soil	MPSDTSTRCADQSVEELRRELAEAREQQTATAEILR
Ga0134127_116584771	3300010399	Terrestrial Soil	MSSEVPTLGGNQSVRELRRELAEAREQQAATAEILAAISRSPTDLQGIFS
Ga0126375_100246951	3300012948	Tropical Forest Soil	MPSKVSAVGGDHLVEELRRELAEAREQQAATAEILASISSSATD
Ga0126375_102791662	3300012948	Tropical Forest Soil	MPSDVATGSGVQSVEDLRRDLAEAREQQAATAGILAAIPNSPTNAYGVFSKIAACAAQL
Ga0126375_105180712	3300012948	Tropical Forest Soil	MPSETSTTSADQSVDELRRELAEAHEQQTATAEYNG
Ga0126369_108911621	3300012971	Tropical Forest Soil	MPSEVPTVGGEQSFEELRRELAESREQQAATADILRV
Ga0126369_128180541	3300012971	Tropical Forest Soil	MPSEVSTTSGAQLVEELRRELAEARERQAATAEILRVISS
Ga0163162_116627331	3300013306	Switchgrass Rhizosphere	MPSEASTIGGDQSAEELRRELAQARRREAATAEVLRVISRSKTD
Ga0182041_122676551	3300016294	Soil	MPSEVPTPSGDQSIEELRRELAEAREQQAATAGILAAISNSPTDPSRV
Ga0182033_119998861	3300016319	Soil	MPSEVSAATGDQSAEELRRELAEAREQQAATAGILEAISNSPADLRRVLAEIA
Ga0182033_121818251	3300016319	Soil	MPSAVSKVGDDQSVEKLERELAESRDQQVATAEILRVISSSSTDPERVFAE
Ga0182032_110414682	3300016357	Soil	MPSEVSTVRGDQSVEELRRELAQALEQQAATAAILAV
Ga0182034_117322831	3300016371	Soil	MSPGASTIGGDQSVEDLRRELAEAREQQAATSEILRVISSSP
Ga0182037_100337811	3300016404	Soil	MPSETKTACADQSVEELRRELVEAREQQAATAGILAAISNSPTDPY
Ga0182037_106857432	3300016404	Soil	MPSEVSTIGGDQSGEELRRELAEAREQQAATAEILAAVSNSPT
Ga0182037_108153812	3300016404	Soil	MPPEVLTVSGDQSVEELGRELAEAREQQAATAEILQVISSSPILQRVFAVVA
Ga0182038_119726331	3300016445	Soil	MPSEVSTIGGDQSVEEIRRELAEAREQQAATAEILAAISNSPTDPSRVFAQI
Ga0187785_104049452	3300017947	Tropical Peatland	MPSEVSTVGGDQSVEELRRELAEARKQQAATAAILATLSNSS
Ga0187783_112603682	3300017970	Tropical Peatland	MTGDQSVEELRRELTEAREQQAATAEILRVISSSRMDVERVF
Ga0187765_103027171	3300018060	Tropical Peatland	MDAMSPEASTISGDQSVEELRRGLAEAREQQAATAEILRVI
Ga0210402_109245802	3300021478	Soil	MPPEMSTVPGDRSVRDLECELTEAREQQAATHELLRVVGRA
Ga0126371_131527592	3300021560	Tropical Forest Soil	MPSEVSTMSGGQSVEELRRELVEAREQQAATAEILQVIS
Ga0207664_113863892	3300025929	Agricultural Soil	MPSETSTTSADQSVDELRRELAEAREQQTATAEIL
Ga0318516_103601651	3300031543	Soil	MSPELSSIGGDQLVDELRHGLAEAREQQAATAEILAAISSSRTNP
Ga0318542_102326261	3300031668	Soil	MPSETKTACADQSVEELRRELVEAREHQAATAGILAAISNSPTDPYRV
Ga0318561_105916802	3300031679	Soil	MSPELSSIGGDQLVDELRHGLAEAREQQAATAEILATISSSR
Ga0318560_103247701	3300031682	Soil	MPSEVSTIGGDQSGEKLRRELAEAREQQAATAEILAAISNSPTDPSRVFAEI
Ga0318500_102202682	3300031724	Soil	MPPEVSTVSGDQSVEELRRELVAAREQQAVTAEILR
Ga0307468_1005868851	3300031740	Hardwood Forest Soil	MPSEVSTGGGDQSAEELRRELAETRERQAATAGILAAISNSPTDAHRVFAEISASA
Ga0306918_106969661	3300031744	Soil	MPSETKTACADQSVEELRRELVEAREQQAATAGILAAISNSPTDPYRVF
Ga0306918_115593931	3300031744	Soil	LPPEMSTVSGDQSVEELRCELAEAREQQTATAEILRVISSSP
Ga0318502_108630431	3300031747	Soil	MSPELSSIGGDQLVDELRHGLAEAREQQAATAEILAAISSSRTNPSSVFTSI
Ga0310917_109127592	3300031833	Soil	MPSETKTACADQSVEELRRELVEAREQQAATAGILAAISNSPTD
Ga0318511_104791051	3300031845	Soil	MSPGASTIGGDQSVEDLRRELAEAREQQGATAEILRVISC
Ga0310910_114807631	3300031946	Soil	MLPEASTIGGDQSVEQLRRELAEAREQQAATAGILAAMSSS
Ga0310909_100893671	3300031947	Soil	MLPEASTIGGDQSLEELRRELAEAREQQAATSEILRVISSSPM
Ga0310909_114651471	3300031947	Soil	MSPELSSIGGDQLVDELRHGLAEAREQQAATAEILAAISSSRTNPSCVFTSIVASAA
Ga0306926_120635711	3300031954	Soil	MPSQVPAAFDHRSVEQLRRQLAEAREQQIATAEILAAIS
Ga0306922_106189841	3300032001	Soil	MPSEVSTVGDDQSVEVLRRELVAAREQQAATAEILRV
Ga0318533_100531281	3300032059	Soil	MLPEASTIGGDQSVEQLRRELAEAREQQAATAGILAAMSSSPTDP
Ga0318533_101652411	3300032059	Soil	MSSKASTLDGNQSTDEFKRELAAAREQQAATAEILR
Ga0318533_109746731	3300032059	Soil	MSTVRDDQLMEELRRELADAREQQAATAEILEGISSSPTGFQRV
Ga0318533_110182401	3300032059	Soil	MSPGASTIGGDQSVEDLRRELAEAREQQAATSEILRVISSSPKGSELV
Ga0318514_107087721	3300032066	Soil	MPSKVSIVSGDQSVEELRRELVAAREQQAATAEIL
Ga0306924_105010321	3300032076	Soil	MPSETRTACADQSVEELRRELVEAREQQAATAGILAAISNSPTDPY
Ga0306920_1002838461	3300032261	Soil	MPSEVSTIGGDQSGEELRRELAEAREQQAATAEILA
Ga0306920_1030587162	3300032261	Soil	MPSEVSTVRGDRSVEELERELAEAREQQAGILAAISNSPNDPHRVFADIAANAARLSDASNAGNFFR
Ga0318519_108645111	3300033290	Soil	MSRVISTDGGDHSVEELRRELAEARAQQAATAEILRVISSSPMDLRSVFV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097866

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences