Metagenome / Metatranscriptome Family F097886

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097886
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	135 residues
Representative Sequence	NTWLWAGYAPVAGGYKRITPADSDVLIDFDGIYVGDLPDIGRSGMAQAYSLELDNKDRGQSNMISDLTFYYIEDGRLMQQGTGALDRDDPEQESKFEYYFGPNRKISAPPKIESFTVPELVERGYRIPVWRSLKPSGS
Number of Associated Samples	81
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.92 %
% of genes near scaffold ends (potentially truncated)	98.08 %
% of genes from short scaffolds (< 2000 bps)	89.42 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (72.115 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.038 % of family members)
Environment Ontology (ENVO)	Unclassified (30.769 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.269 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.24% β-sheet: 33.13% Coil/Unstructured: 56.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF13439	Glyco_transf_4	10.58
PF02874	ATP-synt_ab_N	3.85
PF00534	Glycos_transf_1	2.88
PF00596	Aldolase_II	0.96
PF00083	Sugar_tr	0.96
PF09527	ATPase_gene1	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.12 %
All Organisms	root	All Organisms	27.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.12 %
cellular organisms	root	All Organisms → cellular organisms	27.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.12 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.12 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	5.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.12 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459006\|GBPF9FW01D5GOS	Not Available	529	Open in IMG/M
2170459010\|GIO7OMY01DY3NE	Not Available	525	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101634919	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2644	Open in IMG/M
3300001593\|JGI12635J15846_10131659	All Organisms → cellular organisms → Bacteria	1748	Open in IMG/M
3300001867\|JGI12627J18819_10140200	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300002245\|JGIcombinedJ26739_100075432	All Organisms → cellular organisms → Bacteria	3120	Open in IMG/M
3300002245\|JGIcombinedJ26739_100911700	Not Available	761	Open in IMG/M
3300002245\|JGIcombinedJ26739_101208594	Not Available	645	Open in IMG/M
3300004092\|Ga0062389_101198163	Not Available	945	Open in IMG/M
3300004152\|Ga0062386_100550106	Not Available	940	Open in IMG/M
3300004152\|Ga0062386_101405527	Not Available	581	Open in IMG/M
3300005436\|Ga0070713_101591307	Not Available	634	Open in IMG/M
3300005437\|Ga0070710_10399356	Not Available	921	Open in IMG/M
3300005439\|Ga0070711_100662314	Not Available	876	Open in IMG/M
3300005467\|Ga0070706_100708122	Not Available	934	Open in IMG/M
3300005467\|Ga0070706_101710193	Not Available	573	Open in IMG/M
3300006059\|Ga0075017_100575808	Not Available	859	Open in IMG/M
3300006059\|Ga0075017_101436855	Not Available	543	Open in IMG/M
3300006173\|Ga0070716_101099731	Not Available	634	Open in IMG/M
3300006176\|Ga0070765_100657606	Not Available	989	Open in IMG/M
3300006893\|Ga0073928_10506660	Not Available	865	Open in IMG/M
3300009826\|Ga0123355_11483416	Not Available	663	Open in IMG/M
3300010048\|Ga0126373_11125257	Not Available	851	Open in IMG/M
3300010360\|Ga0126372_12381013	Not Available	580	Open in IMG/M
3300010366\|Ga0126379_11846911	Not Available	708	Open in IMG/M
3300010366\|Ga0126379_13249981	Not Available	544	Open in IMG/M
3300010376\|Ga0126381_100055730	All Organisms → cellular organisms → Bacteria	4863	Open in IMG/M
3300010376\|Ga0126381_104819985	Not Available	519	Open in IMG/M
3300010398\|Ga0126383_10807172	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300010937\|Ga0137776_1413567	Not Available	748	Open in IMG/M
3300011120\|Ga0150983_15256107	Not Available	538	Open in IMG/M
3300011120\|Ga0150983_15728191	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300012177\|Ga0153943_1072730	Not Available	723	Open in IMG/M
3300012683\|Ga0137398_10453000	Not Available	878	Open in IMG/M
3300012971\|Ga0126369_10775782	Not Available	1040	Open in IMG/M
3300012989\|Ga0164305_11620059	Not Available	578	Open in IMG/M
3300016319\|Ga0182033_11935734	Not Available	536	Open in IMG/M
3300016341\|Ga0182035_11651875	Not Available	578	Open in IMG/M
3300016357\|Ga0182032_10086346	All Organisms → cellular organisms → Bacteria	2173	Open in IMG/M
3300016357\|Ga0182032_10214298	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300016371\|Ga0182034_10268591	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300016371\|Ga0182034_10780798	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300016387\|Ga0182040_10449807	Not Available	1020	Open in IMG/M
3300016404\|Ga0182037_10056810	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2645	Open in IMG/M
3300016404\|Ga0182037_11406703	Not Available	617	Open in IMG/M
3300020579\|Ga0210407_11051590	Not Available	619	Open in IMG/M
3300020582\|Ga0210395_10497749	Not Available	917	Open in IMG/M
3300021180\|Ga0210396_11160953	Not Available	648	Open in IMG/M
3300021361\|Ga0213872_10142862	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300021372\|Ga0213877_10063579	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300021401\|Ga0210393_10112957	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2168	Open in IMG/M
3300021401\|Ga0210393_11617402	Not Available	513	Open in IMG/M
3300021402\|Ga0210385_10111929	All Organisms → cellular organisms → Bacteria	1917	Open in IMG/M
3300021406\|Ga0210386_10024358	All Organisms → cellular organisms → Bacteria	4728	Open in IMG/M
3300021407\|Ga0210383_11440088	Not Available	572	Open in IMG/M
3300021420\|Ga0210394_10706144	Not Available	884	Open in IMG/M
3300021478\|Ga0210402_10254428	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300021479\|Ga0210410_10871367	Not Available	787	Open in IMG/M
3300021479\|Ga0210410_11575837	Not Available	550	Open in IMG/M
3300021560\|Ga0126371_10420023	All Organisms → cellular organisms → Bacteria	1481	Open in IMG/M
3300025898\|Ga0207692_10305948	Not Available	969	Open in IMG/M
3300025915\|Ga0207693_10731455	Not Available	765	Open in IMG/M
3300025915\|Ga0207693_11429407	Not Available	512	Open in IMG/M
3300025916\|Ga0207663_11116131	Not Available	634	Open in IMG/M
3300026990\|Ga0207824_1018386	Not Available	746	Open in IMG/M
3300026997\|Ga0207784_1027385	Not Available	586	Open in IMG/M
3300027042\|Ga0207766_1040259	Not Available	524	Open in IMG/M
3300027061\|Ga0209729_1039449	Not Available	595	Open in IMG/M
3300027063\|Ga0207762_1055523	Not Available	577	Open in IMG/M
3300027109\|Ga0208603_1055051	Not Available	602	Open in IMG/M
3300027173\|Ga0208097_1005120	All Organisms → cellular organisms → Bacteria	1349	Open in IMG/M
3300027548\|Ga0209523_1064143	Not Available	755	Open in IMG/M
3300027651\|Ga0209217_1190908	Not Available	554	Open in IMG/M
3300027884\|Ga0209275_10384483	Not Available	790	Open in IMG/M
3300027908\|Ga0209006_10355910	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300027908\|Ga0209006_11205679	Not Available	591	Open in IMG/M
3300028795\|Ga0302227_10107814	Not Available	1143	Open in IMG/M
3300028863\|Ga0302218_10317142	Not Available	507	Open in IMG/M
3300028906\|Ga0308309_11583021	Not Available	558	Open in IMG/M
3300029636\|Ga0222749_10061126	All Organisms → cellular organisms → Bacteria	1689	Open in IMG/M
3300030058\|Ga0302179_10335571	Not Available	666	Open in IMG/M
3300031573\|Ga0310915_10309322	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300031573\|Ga0310915_10548105	Not Available	821	Open in IMG/M
3300031679\|Ga0318561_10335264	Not Available	829	Open in IMG/M
3300031719\|Ga0306917_10046691	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2891	Open in IMG/M
3300031719\|Ga0306917_10051266	Not Available	2779	Open in IMG/M
3300031719\|Ga0306917_10247251	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300031744\|Ga0306918_10159712	All Organisms → cellular organisms → Bacteria	1672	Open in IMG/M
3300031744\|Ga0306918_10425428	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300031744\|Ga0306918_11274749	Not Available	566	Open in IMG/M
3300031753\|Ga0307477_10330043	Not Available	1051	Open in IMG/M
3300031770\|Ga0318521_10685676	Not Available	622	Open in IMG/M
3300031833\|Ga0310917_10058435	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2388	Open in IMG/M
3300031833\|Ga0310917_11188314	Not Available	507	Open in IMG/M
3300031890\|Ga0306925_12270526	Not Available	502	Open in IMG/M
3300031945\|Ga0310913_10696039	Not Available	719	Open in IMG/M
3300032035\|Ga0310911_10506798	Not Available	700	Open in IMG/M
3300032035\|Ga0310911_10847277	Not Available	528	Open in IMG/M
3300032059\|Ga0318533_10515969	Not Available	876	Open in IMG/M
3300032076\|Ga0306924_10145357	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2713	Open in IMG/M
3300032261\|Ga0306920_103808261	Not Available	551	Open in IMG/M
3300032261\|Ga0306920_103918293	Not Available	542	Open in IMG/M
3300033289\|Ga0310914_10952547	Not Available	758	Open in IMG/M
3300033290\|Ga0318519_11059225	Not Available	505	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.12%
Host-Associated	Host-Associated	2.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.38%
Aquatic	Environmental → Aquatic	6.73%
Arthropoda	Host-Associated → Arthropoda	0.96%
Plants	Host-Associated → Plants	0.96%
Fungi	Host-Associated → Fungi	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.50%
Freshwater	Environmental → Aquatic → Freshwater	2.88%
Peat	Environmental → Terrestrial → Peat	2.88%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.92%
Sediment	Environmental → Aquatic → Sediment	1.92%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.96%
Mycelium	Host-Associated → Fungi → Mycelium	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.69%
Loam	Environmental → Terrestrial → Soil → Loam	29.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.88%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.92%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.96%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	43.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.92%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.96%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.96%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.85%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.88%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.92%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.92%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.96%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.96%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.96%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459006	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cm	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012177	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ027 MetaG	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026990	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 73 (SPAdes)	Environmental	Open in IMG/M
3300026997	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 66 (SPAdes)	Environmental	Open in IMG/M
3300027042	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 68 (SPAdes)	Environmental	Open in IMG/M
3300027061	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027063	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
L01_02969180	2170459006	Grass Soil	VLIDFDGIYVGDLPDIGRHGMAQAYSLELNNKDRDQSNMISDLTFYYIEDGRLTQTGTGALDRDDPDQEAKFEYYFGPERKLSGMPTIQSLTVLELAQRGYRIPIWRPSPASGTK
F62_06251200	2170459010	Grass Soil	VIKKVAVDMEGNGKDDLFVGTWYRNSGPNTWLWAGYAPVAGGYKRITPADSDVLIDFDGVYLGDLPDIGRTGMAQAYSLELDNKERGQSNIISDLTFYYIEGGKLMQQGTGALDRDDPEQESKFEYYFGSNRRTSATPKIESYTVGELAKRGYRHSGLGIA
INPhiseqgaiiFebDRAFT_1016349191	3300000364	Soil	NDVFIGTWYRNSGPDTWLWAGYAPTTDGYERITPADSDVLIDFDGIYVGELPDIGRHGMAQAYSLELTNKDRDQSNMISDLTFYYIEDGRLAEQGTGALDRDDPDQKAKYEYYFGPDRKLSETPRIESLTVLDLAQRGYHIPVWRSSAXPGTK*
JGI12635J15846_101316593	3300001593	Forest Soil	GPETWLWAGYAPIAGGYSRITPADSDVLIDFDGIYIGDLPDIGRHGMAQAYSLELNNKDRDQSNMISDLTFYYIEDNRLTQTGTGALDRDDPDQEAKFEYYFGPGRKLSGTPRIESLTVLELAQRGYRIPIWRPAPHPGTN*
JGI12627J18819_101402002	3300001867	Forest Soil	KRITPAHSDILIDFDGIYVGDLPEIGRHGMAQAYSLELDNKDREQSNMISDVTFYYMEHGELLQKGTGALDRDDPEQEAKFEFFFGPNRTVSATPKIESFTVQELASKGYRIPGAVSPR*
JGIcombinedJ26739_1000754325	3300002245	Forest Soil	NTWLWAGYAPVAGGYKRITPADSDVLIDFDGIYVGDLPDIGRSGMAQAYSLELDNKDRGQSNMISDLTFYYIEDGRLMQQGTGALDRDDPEQESKFEYYFGPNRKISAPPKIESFTVPELVERGYRIPVWRSLKPSGS*
JGIcombinedJ26739_1009117002	3300002245	Forest Soil	QNDVFVGTWYRNSGPDTWLWAAYAPIAGGYQRITPPDSDVLIDFDGIYVGDLPEIGRHGMAQAYSLELNNKDRDQSNMISDLAFYYIENGKLTQTGTGALDRDDPDQEAKFEYYFGPERKLSGTPKIESFSVLELAQRGYRIPLWRPSAPAGTQ*
JGIcombinedJ26739_1012085941	3300002245	Forest Soil	DLEGNGKNDVFIGTWYRNSGPDTWLWAGYAPTTDGYERITPADSDVLIDFDGIYVGEIPDIGRRGMAQAYSLELTNKDRDQSNMISDLTFYYIEDGRLAQQGTGALDRDDPDQEAKFEYYFGPDRKMSGTLRVESLTVLDLAQRGYRIPLWRPSTVPGTK*
Ga0062389_1011981631	3300004092	Bog Forest Soil	RITPADSDVLIDFDGIYVGYLPDIGRNGMAQAYSLELNNKDRDKSNIISDLTFYYIDEGQLMQTGTGALDRDEPEQEAKFEYYFGPERKSPGAPRIESLTVLELAQRGYRIPLWRPAPPSGTR*
Ga0062386_1005501062	3300004152	Bog Forest Soil	VFVGTWYRNSGPDTWLWAGYAPVAGGYQRITPADSDVLIDFDGIYVGYLPDVGRNGMAQAYSLELNNKDRDKSNIISDLTFYYIEKGQLMQTGTGALDRDDPEQEAKFEYYFGPERKSPRAPRIESLTVLELAHRGYRIPLWRPSAPLRTQ*
Ga0062386_1014055272	3300004152	Bog Forest Soil	IDFDGIYVGDLPDVGRPGMAQAYSLELDNKDRGQSNMISDLTFYYIEEGRLMQQGTGALDRDDPEQESKFEFYFGPKRKISATPKIESFTVPELVERGYHVPIWR*
Ga0070713_1015913071	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	NSGPDTWLWAGYAPIAGGYQRITPADSDVLIDFDGIYVGYLPDIGRNGMAQAYSLELNNKDRDKSNIISDLTFYYIHEGQLMQTGTGALDRDEPEQEAKFDYYFGPERKSSGAPRIESLTVLELAQRGYRIPLWRPAPPSGTR*
Ga0070710_103993562	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	PDTWLWAGYAPTTAGYERITPRDSDVLIDFDGIYVGDLPDVGRHGMAQAYSLELTNKDRDQSNMISDLTFYYIEDGRLAEQGTGALDRDDPDQKAKYEYYFGPDRKLSETPRIESLTVLDLAQRGYHIPVWRSSAAPGTK*
Ga0070711_1006623141	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RLLVIKKVTIDMEGNGKGDIFVGTWYRNSGPNTWLWAGYTPVAGGYRRITPADSDVLIDFDGIYVGNLPEIGRQGMAQAYSLELDNKDRSQSNMISDLTLYYVEEGKLVEQGSGALDRDDPEEESKFEFYFGPNRKVSATPKIESFTVPELVERGYRIPVWRSPKPSGIQ*
Ga0070706_1007081221	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LIDFDGIYVGDLPEIGRHGMAQAYSLELDNKDREESNMISDVTFYYIEQGELVQKGTGALDRDDPGQEAEYEFYFGPNRKVSATPKIESFTVQELASKGYRIPN*
Ga0070706_1017101932	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	KRITPAHSDVLIDFDGIYVGDLPQIGRHGMAQAYSLELDNQDREQSNMISDVTFYYIEQGELAQKGTGAIDRDDPEQEAEYEFYFGPNRKVSATPKIESFTVQELASKGYRIPN*
Ga0075017_1005758081	3300006059	Watersheds	GTWYRNSGPNTWLWAGYAPVAGGYKRITPADSDVLIDFDGIYVGDLPDIGRPGMAQAYSLELDNKDRGQSNMISDLTFYYIEDGKLIQQGTGALDRDDPEQESKFEYYFGPNRKISAPPRIESFTVPELVERGYHIPVWRSLKPPGS*
Ga0075017_1014368551	3300006059	Watersheds	GPNTWLWAGYAPVTGGYKRITPADSDVLIDFDGIYVGDLPDIGRPGMAQAYSLELDNKDRDQSNMISDVTFYYIEDGRLMQQGTGALDRDDPEQESKFEYYFGPNRKISAPPKIESFTVPELVERGYHIPVWRSLKPSEL*
Ga0070716_1010997312	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	TWYRNSGPDTWLWAGYAPTTDGYERITPADSDVLIDFDGIYVGELPDIGRHGMAQAYSLELTNKDRDQSNMISDLTFYYIEDGRLAEQGTGALDRDDPDQKAKYEYYFGPDRKLSVTPRIESLTVLDLAQRGYHIPVWRSSAAPGTK*
Ga0070765_1006576062	3300006176	Soil	RNSGPDTWLWTGYAPTTGGYHRITPADSDVLIDFDGIYVGDLPDIGRHGMAQAYSLELNNKDRDQSNMISDLTFYYIEDGRLMQTGTGALDRDDPDQEAKFEYYFGPERKLSGIPTIQSLTVLELVQRGYRIPIWRPSTPSGTK*
Ga0073928_105066601	3300006893	Iron-Sulfur Acid Spring	AGGYKRITPADSDVLIDFDGIYVGDLPDIGRSGMAQAYSLELDNKDRGQSNMISDLTFYYIEDGKLMQQGTGALDRDDPEQESKFEYYFGPNRKISAPPKIESFTVPELVERGYRIPVWRSLKPSGS*
Ga0123355_114834161	3300009826	Termite Gut	LWVGYMPEANGYRRITPAGSDVLIDFDGIYVGPLPDLHRQGMAQAYSLELDNKDREQSNLISDLTFYYIENGKLVEQSSGTLDRDDPEQKAKFDFYFGPNRKVRESPTIQSFSVAELAQRGYKIPNWRK*
Ga0126373_111252571	3300010048	Tropical Forest Soil	IAGGYKRITPAHADVLIDFDGIYVGDLPEMGRHGMAQAYSLELDNKDRDQSNMISDVTFYYIEQGELVQEGTGALDRDDPEQEARYEFYFGPNRKVSATPKIESFTVQELASKGYRIPN*
Ga0126372_123810131	3300010360	Tropical Forest Soil	IKRVEVDLEGTGKSEIFLGTWYRHSGPNTWLWAGYTPIAGGYKRITPAHSDVLIDFDGIYVGDLPEIGRHGMAQAYSLELDNKDRDQSNMISDVTFYYIEQGELVQEGTGALDRDDPEQEAKYEFYFGPNRKVSATPKIESLTVQELASKGYRIP*
Ga0126379_118469112	3300010366	Tropical Forest Soil	VGTWYRNSGPNTWLWTGYAPIAGGYKRITPAHSDILIDFDGIYVGDLPEIGRHGMAQAYSLELDNKDREQSNMISDVTFYYMEQGELLQKGTGALDRDDPEQEAKYEFFFGANRTVSAVPRIESFTVQELASKGYRIPGVVSPK*
Ga0126379_132499811	3300010366	Tropical Forest Soil	GPNTWLWAGYLPDGNGYRRITPARSDVLIDFDDIYVGPLPDLHRQGLAQAYSLELDNKDREQSNMISDLTFYYIENGKLVEEGSGILDRDDPEQEAKFDFYFGPNRKMRETPRIESFSVQELAQRGYKIPNWRK*
Ga0126381_1000557306	3300010376	Tropical Forest Soil	LIDFDGIYVGDLPDIGRHGMAQAYSLELDNRDREQSNMISDVTFYYIENGKLMQQGTGALDRDDPDQESKFQYYFGANRKISATPKIESFTVPELVQRGYRIPVWKSTKPLGIQ*
Ga0126381_1048199852	3300010376	Tropical Forest Soil	VLIDFDGIYVGDLPDIGRHGMAQAYSLELDNRDREQSNMISDVTFYYIENGRLMQQGTGALDRDDPDQESKFQYYFGRNRKISATPKIESFTVPELAQRGYRIPVWKSTKPPGVQ*
Ga0126383_108071721	3300010398	Tropical Forest Soil	DFDDIYVGPLPDLHRQGLAQAYSLELDNKDREQSNMISDLTFYYIENGKLVEEGSGILDRDDPEQEAKFDFYFGPNRKMRETPRIESFSVQELAQRGYKIPNWRK*
Ga0137776_14135671	3300010937	Sediment	DVLIDFDGIYVGYLPDAARPGMAQAYSLELTNKDRDQSNMISDLTFYYVENGTLVQQGTGALDRDDPDQEAKFEYYFGPNRQVSMTPKIESFTVFDLAQRGYRIPTWHSSPPKGAQ*
Ga0150983_152561071	3300011120	Forest Soil	RNSGPNTWLWAGYAPVAGGYKRITPADSDVLIDFDGIYVGDLPDIGRHGMPQAYSLELDNKDRDQSNMISDVTFYYIEDGRLMQQGTGALDRDDPEQESKFEYYFGPNRKISAPPRIESFTVPELVERGYHIPVWRSLKPSEL*
Ga0150983_157281913	3300011120	Forest Soil	GTWYRNSGPDTWLWAGYAPIAGGYQRITPADSDVLIDFDGIYVGYLPDIGRNGMAQAYSLELNNKDRDKSNIISDLTFYYIDDGQLMQTGTGALDRDEPEQEAKFEYYFGPERKSQGAPRIESLTVLELAQRGYRIPLWRPAPPSGAR*
Ga0153943_10727301	3300012177	Attine Ant Fungus Gardens	YRNSGPDTWLWAGYAPIAGGFKRITPADSDVLIDFDGIYVGYLPDAARQGMAQAYSLELTNKDRDQSNMISDLTFYYVENGTLVQQGTGALDRDDPDQEAKFEYYFGPNRQVSMTPKIESFTVFDLAQRGYRIPTWHSSPPKGAQ*
Ga0137398_104530001	3300012683	Vadose Zone Soil	TWLWAGYAPTAGGYNRITPADSDVLIDFDGIYVGYLPDVDRHGMAQAYSLELNNKDREQSNMISDLTFYYIENGQLTQKGTGALDRDDPDQEAIFEYYFGPERKSSGTPRIESLTVLELAQRGYRIPLWRLTSPPGTK*
Ga0126369_107757822	3300012971	Tropical Forest Soil	EVDLEGNGKSEIFLGTWYRHSGPNTWLWAGYTPIAGGYKRITPAHADVLIDFDGIYVGDLPEMGRHGMAQAYSLELDNKDRDQSNMISDVTFYYIEQGELVQEGTGALDRDDPEQEARYEFYFGPNRKVSATPKIESFTVQELASKGYRIPN*
Ga0164305_116200591	3300012989	Soil	ETWLWAGYAPVAGGYHRITPADSDVLIDFDGIYVGNLPEVGQRGMAQAYSLELHNKDRDQSNMISDLTFYYIQDGQLRQAGTGALDREDPDQEAKFEYYFGPKRQSSESPKVESFTVMELAQRGYRIPLWRPALPTATK*
Ga0182033_119357342	3300016319	Soil	YLPDGNGYRRITPAGSDVLIDFDGIYVGPLPDLHRQGLAQAYSLELDNKDREQSNMISDLTFYYIENGKLVEEGSGILDRDDPEQEAKFDFYFGPNRKIRETPRIESFSVQELAQRGYKIPSWRK
Ga0182035_116518751	3300016341	Soil	VGTWYRKSGPNTWLWAGYAPIAGGYKRITPAHSDVLIDFEGIYVGDIPEIGRHGMAQAYSLELDNKDRDQSNMISDVTFYYVDQGELLQKGTGALDRDDPEQEAKFEFFFGPNRRVSATPRIES
Ga0182032_100863463	3300016357	Soil	GIYVGDIPEIGRHGMAQAYSLELDNKDRAQSNMISDVTFYYMEHGELLQKGTGALDRDDPEQEAKFEFFFGPNRTVSATPKIESFTVQELASKGYRIPGAVSPK
Ga0182032_102142983	3300016357	Soil	WYRNSGPNTWLWAGYVPDGNGYRRITPAGSDVLIDFDGIYVGPLPDLHRQGLAQAYSLELDNKDREQSNMISDLTFYYVENGKLVEEGSGTLDRDDPEQEAKFDFYFGPNRKIRETPRIESFSVQELAQRGYKIPSWRK
Ga0182034_102685911	3300016371	Soil	PNTWLWAGYAPTAGGYKRITPAHSDILIDFDGIYVGDIPEIGRHGMAQAYSLELDNKDRDQSNMISDVTFYYMENGELLEKGTGALDRDDPEQEAKFEFFFGPNRTVSATPRVESFTVQELASKGYRIPGAVSSK
Ga0182034_107807983	3300016371	Soil	YVGPLPDLHRQGLAQAYSLELDNKDREQSNMISDLTFYYVENGKLVEEGSGTLDRDDPEQEAKFDFYFGPNRKIRETPRVESFSVQELAQRGYRIPNWRK
Ga0182040_104498072	3300016387	Soil	DGIYVGDLPEIGRHGMAQAYSLELDNKDREQSNIISDVTFYYIEQGELVQKGTGALDRDDPEQEAEYEFYFGPNRKVSATPKIESFTVQELASKGYRIP
Ga0182037_100568101	3300016404	Soil	EGNGKKEIFVGTWYRNSGPNTWLWAGYAPIAGGYKRITPAHSDILIDFDGIYVGDIPEIGRHGMAQAYSLELDNKDREQSNMISDVTFYYMDNGELLEKGTGALDRDDPEQEAKFEFFFGPNRTVSATPRVESFTVQELASKGYRIPGAASSK
Ga0182037_114067031	3300016404	Soil	ITPAHSDILIDFNGIYVGDIPEIGRHGMAQAYSLELDNKDREQSNIISDLTFYYMEHEELLQKGTGALDRDDPEQEAKFEFFFGPNRTVSATPRIESFTVQELASKGYRIPGAVFPK
Ga0210407_110515901	3300020579	Soil	RNSGPDTWLWTGYAPTAGGYNRITSADSDVLIDFDGIYVGDLPDIGRHGMAQAYSLELNNKDRDQSNMISDLTFYYIEDGRLTQTGTGALDRDDPGQEAKFEYYFGPERKLSGIPTIQSLTVLELVQRGYRIPIWRPSTPSGTK
Ga0210395_104977492	3300020582	Soil	WLWAGYAPVTGGYERITPADSDVLIDFDRIYVGDLPDIGRHGMAQAYSLELDNKDRDQSNMISDVTFYYIEDGRLMQQGTGALDRDDPEQESKFEYYFGPNRKISAPPKIESFTVPELVERGYHIPVWRSLKPSEL
Ga0210396_111609531	3300021180	Soil	KRITPADSDVLIDFDRIYVGDLPDIGRHGMAQAYSLELDNKDRDQSNMISDVTFYYIEDGRLMQQGTGALDRDDPEQESKFEYYFGPNRKISAPPRIESFTVPELVERGYHIPVWRSLKPSEL
Ga0213872_101428621	3300021361	Rhizosphere	IDLEGNGKNDVFVGTWYRNSGPNTWLWAGYAPIAGGYERITPADSDVLIDFDAIYVGYLPDIGRRGMAQAYSLELDNRDRDQSNMISDLSFYYVENGKLMQQGTGALDRDDPEQESKFQYYFGPNRKISATPKIESFTVPELVQRGYRIPIWKSTKPPGVQ
Ga0213877_100635793	3300021372	Bulk Soil	DGIYVGELPDIGRHGMAQAYSLELDNRDREQSNMISDVTFYYIENGRLMQQGTGALDRDDPDQESKFQYYFGPNRKISATPKIESFTVPELAQRGYRIPAWKSTKPPGVQ
Ga0210393_101129571	3300021401	Soil	PDTWLWTGYAPTAGGYNRITSADSDVLIDFDGIYVGDLPDIGRHGMAQAYSLELNNKDRDQSNMISDLTFYYIEDGRLTQTGTGALDRDDPGQEAKFEYYFGPERKLSGIPTIQSLTVLELAQRGYRIPIWHPSPASGTK
Ga0210393_116174021	3300021401	Soil	WTGYAPTAGGYNRITSADSDVLIDFDGIYVGDLPDIGRHGMAQAYSLELNNKDRDQSNMISDLTFYYIEDGRLMQTGTGALDRDDPDQEAKFEYYFGPERKLSGIPTIQSLTVLELVQRGYRIPIWRPSTPSGTK
Ga0210385_101119291	3300021402	Soil	GYNRITSADSDVLIDFDGIYVGDLPDIGRHGMAQAYSLELNNKDRDQSNMISDLTFYYIEDGRLMQTGTGALDRDDPDQEAKFEYYFGPERKLSGIPTIQSLTVLELVQRGYRIPIWRPSTPSGTK
Ga0210386_100243581	3300021406	Soil	LLVIKKVEIDLEGTGKDDVFVGTWYRNSGPDTWLWTGYAPMAGGYQRITPADSDVLIDFDGIYVGYLPEIGRNGMAQAYSLELTNKDRDKSNIISDLTFYYIQDGQLMQTGTGVLDRDEPEQEAKFEYYFGPERKSTVAPRIESLTVLELAHQGYRIPLWRPAPPPVSQ
Ga0210383_114400881	3300021407	Soil	VAIDMEGNGKDDLFVGTWYRNSGPNTWLWAGYAPVTGGYERITPADSDVLIDFDRIYVGDLPDIGRHGMAQAYSLELDNKDRDQSNMISDVTFYYIEDGRLMQQGTGALDRDDPEQESKFEYYFGPNRKISAPPKIESFTVPELVERGYHIPVWRSLKPSEL
Ga0210394_107061441	3300021420	Soil	VLIDFDGIYVGDLPDVGRHGMAQAYSLELPNKDRDQSNMISDLTFYYVEEGRLAQQGTGALDRDDPDQKAKFEYYFGPDRKLSGTPRIESLTVLDLAQRGYRIPVWHSSSAPGTK
Ga0210402_102544281	3300021478	Soil	RLLVIKEVAIDMEGNGKDDLFVGTWYRNSGPNTWLWAGYAPVTGGYERITPADSDVLIDFDRIYVGDLPDIGRHGMAQAYSLELDNKDRDQSNMISDVTFYYIEDGRLMQQGTGALDRDDPEQESKFEYYFGPNRKISAPPKIESFTVPELVERGYHIPVWRSLKPSEL
Ga0210410_108713671	3300021479	Soil	LWAGYAPTTGGYERITPADSDILIDFDGIYVGDLPDIGRHGMAQAYSLELPNKDRDQSNMISDLTFYYVEEGRLAQQGTGALDRDDPDQKAKFEYYFGPDRKLSGTPRIESLTVLDLAQRGYRIPVWHSSSAPGTK
Ga0210410_115758371	3300021479	Soil	KNDVFIGTWYRNSGPDTWLWAGYAPTTDGYERITPADSDVLIDFDGIYVGELPDIGRRGMAQAYSLELTNKDRDQSNMISDLTFYYIEDGHLAQQGTGALDRDDPDQEAKFEYYFGPDRKMSGTPRVESLTVLDLAQRGYRIPRWHPSTVPGTK
Ga0126371_104200233	3300021560	Tropical Forest Soil	PNTWLWAGYTPIAGGYKRITPAHADVLIDFDGIYVGDLPEMGRHGMAQAYSLELDNKDRDQSNMISDVTFYYIEQGELVQEGTGALDRDDPEQEARYEFYFGPNRKVSATPKIESFTMQELASKGYRIPN
Ga0207692_103059481	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	TTAGYERITPRDSDVLIDFDGIYVGDLPDVGRHGMAQAYSLELTNKDRDQSNMISDLTFYYTEDGRLAEQGTGALDRDDPDQKAKYEYYFGPDRKLSETPRIESLTVLDLAQRGYHIPVWRSSAAPGTK
Ga0207693_107314552	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VLIDFDGIYVGDLPDVGRHGMAQAYSLELTNKDRDQSNMISDLTFYYIEDGHLAQQGTGALDRDDPDQEAKFEYYFGPDRKMSGTPRVESLTVLDLAQRGYRIPRWHPSTVPGTK
Ga0207693_114294071	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LLVIKEVAVDMEGNGKDDLFVGTWYRNSGPNTWLWAGYAPVPGGYKRITPADSDVLIDFDGIYVGDLPDIGRPGMAQAYSLELDNKDRSQSNMISDLTFYFIEDGKLRQQGTGALDRDDPEQESKFEYYFGPNRKMSAPPKIESFTIPELAERGYHIPVWRSLKPSGL
Ga0207663_111161311	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	GRLLVIKKVTIDMEGNGKGDIFVGTWYRNSGPNTWLWAGYTPVAGGYRRITPADSDVLIDFDGIYVGNLPEIGRQGMAQAYSLELDNKDRSQSNMISDLTLYYVEEGKLVEQGSGALDRDDPEEESKFEFYFGPNRKVSATPKIESFTVPELVERGYRIPVWRSPKPSGIQ
Ga0207824_10183861	3300026990	Tropical Forest Soil	NVGRLLVIKEVAIDMEGNGKDDLFVGTWYRNSGPNTWLWAGYAPVAGGYKRITPADSDVLIDFDGIYVGDLPDIGRPGMAQAYSLELDNKDRGQSNMISDLTFYYIEDGKLMQQGTGALDRDDLEQESKFEYYFGPNRKISAPPKIESFTVPELVERGYHIPVWRSLKPPGS
Ga0207784_10273852	3300026997	Tropical Forest Soil	VLIDFDGIYVGDLPDIGRPGMAQAYSLELDNKDRGQSNMISDLTFYYIEDGKLMQQGTGALDRDDLEQESKFEYYFGPNRKISAPPKIESFTVPELVERGYHIPVWRSLKPPGS
Ga0207766_10402591	3300027042	Tropical Forest Soil	VAGGYKRITPADSDVLIDFDGIYVGDLPDIGRPGMAQAYSLELDNKDRGQSNMISDLTFYYIEDGKLMQQGTGALDRDDLEQESKFEYYFGPNRKISAPPKIESFTVPELVERGYHIPVWRSLKPPGS
Ga0209729_10394491	3300027061	Forest Soil	PAHSDILIDFDGIYVGDLPEIGRHGMAQAYSLELDNKDREQSNMISDVTFYYMEHGELLQRGTGALDRDDPEQEAKFEFFFGPNRTVSATPKIQSFTVQELASKGYRIPGAVSPK
Ga0207762_10555231	3300027063	Tropical Forest Soil	LPDIGRPGMAQAYSLELDNKDRGQSNMISDLTFYYIEDGKLMQQGTGALDRDDLEQESKFEYYFGPNRKISAPPKIESFTVPELVERGYHIPVWRSLKPPGS
Ga0208603_10550511	3300027109	Forest Soil	DDLFVGTWYRNSGPNTWLWAGYAPVTGGYKRITPADSDVLIDFDRIYVGDLPDIGRHGMAQAYSLELDNKDRDQSNMISDVTFYYIEDGRLMQQGTGALDRDDPEQESKFEYYFGPNRKISAPPKIESFTVPELVERGYHIPVWRSLKPSEL
Ga0208097_10051203	3300027173	Forest Soil	IYVGDLPDIGRHGMAQAYSLELDNKDRDQSNMISDVTFYYIEDGRLMQQGTGALDRDDPEQESKFEYYFGPNRKISAPPRIESFTVPELVERGYHIPVWRSLKPSEL
Ga0209523_10641431	3300027548	Forest Soil	EGNGKNDVFVGTWYRNSGPNTWLWAGYAPVAGGYERITPADSDVLIDFDGIYVGYLPDIGRRGMAQAYSLELDNRDREQSNMISDLTFYYIENGRLMQQGTGALDRDDPDQESKFQYYFGPNRKTSATPKIESFTVPELAQRGYRIPVWKSAKPPVIPPKELVQIDGPGV
Ga0209217_11909081	3300027651	Forest Soil	DVLIDFDGIYVGYLPDIGKYGMAQAYSLELNNKDRDQSNMISDLDFYYIEDGRLAQRGTGALDRDDPDQEAKFEYYFGPGRKSSETPKIESMTVLELLQRGYHVPVWRRSAPAGTD
Ga0209275_103844831	3300027884	Soil	TWYRNSGPDTWLWTGYAPTAGGYNRITSADSDVLIDFDGIYVGDLPDIGRHGMAQAYSLELNNKDRDQSNMISDLTFYYIEDGRLMQTGTGALDRDDPDQEAKFEYYFGPERKLSGIPTIQSLTVLELVQRGYRIPIWRPSTPSGTK
Ga0209006_103559101	3300027908	Forest Soil	DSDVLIDFDGIYVGDLPEIGRHGMAQAYSLELNNKDRDQSNMISDLTFYYIEDGRLAQAGTGALDRDDPDQEAEFEYYFGPARKLSESPRIESITVVELAQRGYRIPLWRAAAPPGTK
Ga0209006_112056791	3300027908	Forest Soil	YQRITPPDSDVLIDFDGIYVGDLPEIGRHGMAQAYSLELNNKDRDQSNMISDLAFYYIENGKLTQTGTGALDRDDPDQEAKFEYYFGPERKLSGTPKIESFSVLELAQRGYRIPLWRPSAPAGTQ
Ga0302227_101078141	3300028795	Palsa	PTAGGYERITPADSDVLIDFDGIYVGDLPDIGRHGMAQAYSLELTNKDRDQSNMISDLTFYYIENSRLTQTGTGALDRDDPDQEAKFEYYFGPNRKLSGTPRIESMTVLDLVQRGYRIPLWRPPGAPGTK
Ga0302218_103171421	3300028863	Palsa	DTWLWAGYAPTAGGYERITPADSDVLIDFDGIYVGDLPDIGRHGMAQAYSLELTNKDRDQSNMISDLTFYYIENSRLTQTGTGALDRDDPDQEAKFEYYFGPNRKLSGTPRIESMTVLDLVQRGYRIPLWRPPGAPGTK
Ga0308309_115830211	3300028906	Soil	LPEIDRHGMAQAYSLELNNKDRDQSNMISDLTFYYIEDGELAQSGTGALDREDPEQEAKFEYYFGPERKLTGTPRIVSMTVLELAQKGYRIPIWRPSAPPGSK
Ga0222749_100611261	3300029636	Soil	GYAPVTGGYERITPADSDVLIDFDRIYVGDLPDIGRHGMAQAYSLELDNKDRDQSNMISDVTFYYIEDGRLMQQGTGALDRDDPEQESKFEYYFGPNRKISAPPKIESFTVPELVERGYHIPVWRSLKPSEL
Ga0302179_103355711	3300030058	Palsa	FVGTWYRNSGPDTWLWTGYAPTADGYERITPADSDVLIDFDGIYVGDLPDVGRHGMAQAYSLELTNKDRDQSNMISDLTFYYIVDGRLAQQGTGALDRSEPDQEAKFQYYFGPDRKLSGTPRIESFTVMDLAKRGYRIPNWRPLAVPGTK
Ga0310915_103093221	3300031573	Soil	RSDVLIDFDGIYVGDIPELGRHGMAQAYSLELDNKEREQSNMISDVTFYYLEDGELLQKGTGALDRDDPEQEAKFEFFFGQNRKVSATPRIESFTVQELASKGYRIPGVASPK
Ga0310915_105481051	3300031573	Soil	IFLGTWYRHSGPNTWLWAGYTPIAGGYKRITPAHSDVLIDFEGIYVGDLPEIGRHGMAQAYSLELDNKDREQSNMISDVTFYYIEQGELVQKGTGALDRDDPEQEAEYEFYFGPNRKVSATPKIEAFTVQELASKGYRIP
Ga0318561_103352641	3300031679	Soil	RVEVDLEGNGKNEIFVGTWYRNSGPNTWLWAGYAPIAGGYKRITPARSDVLIDFDGIYVGDIPELGRHGMAKAYSLELDNKEREQSNMISDVTFYYLEDGELLQKGTGALDRDDPEQEAKFEFFFGQNRKVSATPRIESFTVQELASKGYRIPGVASPK
Ga0306917_100466911	3300031719	Soil	HLLIIKRVEVDLEGNGKNEIFVGTWYRNSGPNTWLWAGYAPIAGGYKRITPARSDVLIDFDGIYVGDIPELGRHGMAQAYSLELDNKEREQSNMISDVTFYYLEDGELLQKGTGALDRDDPEQEAKFEFFFGQNRKVSATPRIESFTVQELASKGYRIPGVASPK
Ga0306917_100512661	3300031719	Soil	EIFLGTWYRHSGPNTWLWAGYTPIAGGYKRITPAHSDVLIDFDGIYVGDLPEIGRHGMAQAYSLELDNKDREQSNMISDVTFYYIEQGELVQKGTGALDRDDPEQEAEYEFYFGPNRKVSATPKIESFTVQELASKGYRIP
Ga0306917_102472513	3300031719	Soil	KSGPNTWLWAGYAPTAGGYKRITPAHSDILIDFDGIYVGDIPEIGRHGMAQAYSLELDNKDRDQSNMISDVTFYYIENGELLEKGTGALDRDDPEQEAKFEFFFGPNRTVSATPRVESFTVQELASKGYRIPGAVSSK
Ga0306918_101597121	3300031744	Soil	LEGNGKNEIFVGTWYRNSGPNTWLWAGYAPIAGGYKRITPARSDVLIDFDGIYVGDIPELGRHGMAQAYSLELDNKEREQSNMISDVTFYYLEDGELLQKGTGALDRDDPEQEAKFEFFFGQNRKVSATPRIESFTVQELASKGYRIPSVASPK
Ga0306918_104254281	3300031744	Soil	HSGPNTWLWAGYAPIAGGYKRITPAHSDILIDFDGIYVGDIPEIGRHGMAQAYSLELDNKDRAQSNMISDVTFYYMEHGELLQKGTGALDRDDPEQEAKFEFFFGPNRTVSATPKIESFTVQELASKGYRIPGAVSPK
Ga0306918_112747491	3300031744	Soil	DLEGNGKNEIFVGTWYRKSGPNTWLWAGYAPIAGGYKRITPAHSDILIDFDGIYVGDIPEIGRHGMAQAYSLELDNKDREQSNMISDVTFYYMDNGELLEKGTGALDRDDPEQEAKFEFFFGPNRAVSATPRIESFTVQELASKGYRIPGAVFPK
Ga0307477_103300432	3300031753	Hardwood Forest Soil	MIVPDRVTNVGRLLVIKKVTVDMEGNGKNEVFVGTWYRNSGPNTWLWAGYSPVAGGYVRITPPDSDILIDFDGIYVGYLPDLGRTGMAQAYSLELDNKDRGQSNMISDLTFYYIEDEKLIQQGTGALDRDDPEQESKYEYYFGPNRKISAT
Ga0318521_106856762	3300031770	Soil	KRITPAHADVLIDFDGIYVGDLPEIGRHGMAQAYSLELDNKDREQSNMISDVTFYYIEQGELVQKGTGALDRDDPEQEAEYEFYFGPNRKVSATPKIESFTVQELASKGYRIP
Ga0310917_100584351	3300031833	Soil	YAPIAGGYKRITPARSDVLIDFDGIYVGDIPELGRHGMAQAYSLELDNKEREQSNMISDVTFYYLEDGELLQKGTGALDRDDPEQEAKFEFFFGQNRKVSATPRIESFTVQELASKGYRIPGVASPK
Ga0310917_111883141	3300031833	Soil	VFVGTWYRNSGPNTWLWAGYLPDGNGYRRITPAGSDVLIDFDSIYVGPLPDLHRQGLAQAYSLELDNKDREQSNMISDLTFYYVENGKLVEEGSGTLDRDDPEQEAKFDFYFGPNRKIRETPRIESFSVQELAQRGYKIPSWRK
Ga0306925_122705261	3300031890	Soil	YLPDGNGYRRITPAGSDVLIDFDGIYVGPLPDLHRQGLAQAYSLELDNKDREQSNMISDLTFYYIENGKLVEEGSGILDRDDPEQEAKFDFYFGPNRKIRETPRVESFSVQELAQRGYRIPNWRK
Ga0310913_106960392	3300031945	Soil	KKVEVDLNGDGKQEVFVGTWYRNSGPNTWLWAGYVPDGNGYRRITPAGSDVLIDFDGIYVGPLPDLHRQGLAQAYSLELDNKDREQSNMISDLTFYYIENGKLVEEGSGILDRDDPEQKAKFDFYFGPDRKMRETPRIESFSVQELAQRGYKIPNWRK
Ga0310911_105067982	3300032035	Soil	YKRITPAHSDILIDFDGIYVGDIPEIGRHGMAQAYSLELDNKDRAQSNMISDVTFYYMEHGELLQKGTGALDRDDPEQEAKFEFFFGPNRTVSATPKIESFTVQELASKGYRIPGAVSPK
Ga0310911_108472771	3300032035	Soil	ITPAGSDVLIDFDGIYVGPLPDLHRQGLAQAYSLELDNKDREQSNMISDLTFYYIENGKLVEEGSGILDRDDPEQKAKFDFYFGPDRKMRETPRIESFSVQELAQRGYKIPNWRK
Ga0318533_105159692	3300032059	Soil	LIIKRVDVDLEGTGKSEIFLGTWYRHSGPNTWLWAGYTPIAGGYKRITPAHSDVLIDFDGIYVGDLPEIGRHGMAQAYSLELDNKDREQSNMISDVTFYYIEQGELVQKGTGALDRDDPEQEAEYEFYFGPNRKVSATPKIEAFTVQELASKGYRIP
Ga0306924_101453571	3300032076	Soil	LIIKKVEVDLEGNGKNEIFVGTWYRHSGPNTWLWAGYAPIAGGYKRITPAHSDILIDFDGVYVGDIPEIGRHGMAQAYSLELDNKDRAQSNMISDVTFYYMEHGELLQKGTGALDRDDPEQEAKFEFFFGPNRTVSATPKIESFTVQELASKGYRIPGAVSPK
Ga0306920_1038082611	3300032261	Soil	RITPAHSDILIDFDGIYVGDIPEIGRHGMAQAYSLELDNKDRDQSNMISDVTFYYMENGELLEKGTGALDREDPEQEGKFEFFFGPNRTVSATPRVESFTVQELASKGYRIPGAVSSK
Ga0306920_1039182931	3300032261	Soil	LIIKRVEVDLEGNGKNEIFVGTWYRNSGPNTWLWAGYAPIAGGYQRITPAHSDILIDFDGIYVGEIPEIGRHGMAQAYSLELDNKNREQSNMISDVTFYYMEHGELLQKGTGALDRDDPEGEAKFEFFFGPNRAVSATPKIESFTVQELASKGYRIPSAVSPK
Ga0310914_109525471	3300033289	Soil	IFLGTWYRHSGPNTWLWAGYTPIAGGYKRITPAHSDVLIDFDGIYVGDLPEIGRHGMAQAYSLELDNKDREQSNMISDVTFYYIEQGELVQKGTGALDRDDPEQEAEYEFYFGPNRKVSATPKIESFTVQELASQGYRIP
Ga0318519_110592252	3300033290	Soil	GSDVLIDFDSIYVGPLPDLHRQGLAQAYSLELDNKDREQSNMISDLTFYYVENGKLVEEGSGTLDRDDPEQEAKFDFYFGPNRKIRETPRIESFSVQELAQRGYKIPSWRK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097886

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences