NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F097923

Metagenome / Metatranscriptome Family F097923

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F097923
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 85 residues
Representative Sequence MHRNIRTAAVAFVLFIGGSGFCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKD
Number of Associated Samples 77
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 72.12 %
% of genes near scaffold ends (potentially truncated) 35.58 %
% of genes from short scaffolds (< 2000 bps) 95.19 %
Associated GOLD sequencing projects 63
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (50.962 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere
(14.423 % of family members)
Environment Ontology (ENVO) Unclassified
(60.577 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(91.346 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: Yes Secondary Structure distribution: α-helix: 13.79%    β-sheet: 0.00%    Coil/Unstructured: 86.21%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF09361Phasin_2 2.88
PF02586SRAP 1.92
PF04909Amidohydro_2 0.96
PF04545Sigma70_r4 0.96
PF13628DUF4142 0.96
PF13490zf-HC2 0.96
PF16881LIAS_N 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG2135ssDNA abasic site-binding protein YedK/HMCES, SRAP familyReplication, recombination and repair [L] 1.92

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms50.96 %
UnclassifiedrootN/A49.04 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_100574031All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales655Open in IMG/M
3300004157|Ga0062590_102919046All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira → Leptospira interrogans512Open in IMG/M
3300005093|Ga0062594_100472925All Organisms → cellular organisms → Bacteria1047Open in IMG/M
3300005328|Ga0070676_10147167All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1505Open in IMG/M
3300005329|Ga0070683_101987058Not Available559Open in IMG/M
3300005331|Ga0070670_100296058Not Available1415Open in IMG/M
3300005331|Ga0070670_101606617All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira → Leptospira interrogans598Open in IMG/M
3300005335|Ga0070666_10989383All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300005339|Ga0070660_100403943All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1130Open in IMG/M
3300005340|Ga0070689_101643263Not Available584Open in IMG/M
3300005340|Ga0070689_101977807All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum → Thermobaculum terrenum533Open in IMG/M
3300005354|Ga0070675_101759140Not Available572Open in IMG/M
3300005355|Ga0070671_100156911All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1922Open in IMG/M
3300005355|Ga0070671_100161686All Organisms → cellular organisms → Bacteria1893Open in IMG/M
3300005364|Ga0070673_100516776All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1082Open in IMG/M
3300005365|Ga0070688_100259044Not Available1241Open in IMG/M
3300005366|Ga0070659_100697047Not Available878Open in IMG/M
3300005366|Ga0070659_101263741Not Available654Open in IMG/M
3300005367|Ga0070667_100477792All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1141Open in IMG/M
3300005435|Ga0070714_100956751All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales832Open in IMG/M
3300005435|Ga0070714_102211241Not Available536Open in IMG/M
3300005436|Ga0070713_100928355Not Available838Open in IMG/M
3300005436|Ga0070713_101569958All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales639Open in IMG/M
3300005439|Ga0070711_101675998All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira → Leptospira interrogans557Open in IMG/M
3300005441|Ga0070700_100585800Not Available872Open in IMG/M
3300005529|Ga0070741_10645705All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales939Open in IMG/M
3300005544|Ga0070686_100666102All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium827Open in IMG/M
3300005544|Ga0070686_100732993Not Available791Open in IMG/M
3300005564|Ga0070664_100377834All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1293Open in IMG/M
3300005564|Ga0070664_101199466Not Available716Open in IMG/M
3300005615|Ga0070702_101056383Not Available646Open in IMG/M
3300006028|Ga0070717_10104557All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2408Open in IMG/M
3300006028|Ga0070717_11897555Not Available538Open in IMG/M
3300006173|Ga0070716_100345756Not Available1051Open in IMG/M
3300006175|Ga0070712_100132054All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1893Open in IMG/M
3300006175|Ga0070712_101238267Not Available649Open in IMG/M
3300006800|Ga0066660_10428313All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1100Open in IMG/M
3300006854|Ga0075425_100589387All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1279Open in IMG/M
3300006854|Ga0075425_100806310Not Available1076Open in IMG/M
3300009098|Ga0105245_10906037Not Available924Open in IMG/M
3300009098|Ga0105245_13217861Not Available506Open in IMG/M
3300009174|Ga0105241_11109492All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales745Open in IMG/M
3300009174|Ga0105241_11536356Not Available642Open in IMG/M
3300009176|Ga0105242_11340083Not Available741Open in IMG/M
3300009177|Ga0105248_13261484Not Available516Open in IMG/M
3300009545|Ga0105237_11658790Not Available646Open in IMG/M
3300009553|Ga0105249_10869435All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales968Open in IMG/M
3300010373|Ga0134128_12020101Not Available635Open in IMG/M
3300010375|Ga0105239_10406437All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1541Open in IMG/M
3300010399|Ga0134127_10494017All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1234Open in IMG/M
3300010399|Ga0134127_12040849Not Available652Open in IMG/M
3300011119|Ga0105246_10069302All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga2477Open in IMG/M
3300011119|Ga0105246_10459649All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1072Open in IMG/M
3300012212|Ga0150985_119179276Not Available560Open in IMG/M
3300012898|Ga0157293_10329170Not Available515Open in IMG/M
3300013296|Ga0157374_12011536Not Available604Open in IMG/M
3300013297|Ga0157378_11589139All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales700Open in IMG/M
3300013306|Ga0163162_11285923All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales831Open in IMG/M
3300014745|Ga0157377_10913208Not Available657Open in IMG/M
3300014969|Ga0157376_12165911All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales595Open in IMG/M
3300015371|Ga0132258_11629150Not Available1629Open in IMG/M
3300015371|Ga0132258_12819279All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1210Open in IMG/M
3300015371|Ga0132258_12917488Not Available1188Open in IMG/M
3300015373|Ga0132257_103089546All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales606Open in IMG/M
3300015374|Ga0132255_100994518Not Available1258Open in IMG/M
3300020069|Ga0197907_10174253All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales712Open in IMG/M
3300020070|Ga0206356_10441783All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales728Open in IMG/M
3300020080|Ga0206350_10143303All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales822Open in IMG/M
3300020080|Ga0206350_10392151All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales618Open in IMG/M
3300020080|Ga0206350_11194873Not Available544Open in IMG/M
3300020081|Ga0206354_10108575Not Available528Open in IMG/M
3300020081|Ga0206354_11465440All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales787Open in IMG/M
3300022467|Ga0224712_10338584All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales709Open in IMG/M
3300022467|Ga0224712_10470282Not Available605Open in IMG/M
3300022467|Ga0224712_10536898Not Available567Open in IMG/M
3300025893|Ga0207682_10187012All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales948Open in IMG/M
3300025901|Ga0207688_10807170All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales594Open in IMG/M
3300025905|Ga0207685_10203176Not Available932Open in IMG/M
3300025911|Ga0207654_11069982Not Available587Open in IMG/M
3300025915|Ga0207693_10881160Not Available687Open in IMG/M
3300025919|Ga0207657_10416784All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1056Open in IMG/M
3300025920|Ga0207649_10766207Not Available752Open in IMG/M
3300025923|Ga0207681_10410119All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1096Open in IMG/M
3300025925|Ga0207650_10031932All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3807Open in IMG/M
3300025925|Ga0207650_10426478All Organisms → cellular organisms → Bacteria1101Open in IMG/M
3300025925|Ga0207650_10896139All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales753Open in IMG/M
3300025926|Ga0207659_11105414Not Available682Open in IMG/M
3300025927|Ga0207687_11104717Not Available681Open in IMG/M
3300025928|Ga0207700_11018181Not Available741Open in IMG/M
3300025929|Ga0207664_11815369Not Available532Open in IMG/M
3300025929|Ga0207664_12002930Not Available502Open in IMG/M
3300025931|Ga0207644_10108050All Organisms → cellular organisms → Bacteria2100Open in IMG/M
3300025931|Ga0207644_10541051All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales963Open in IMG/M
3300025932|Ga0207690_10690582Not Available838Open in IMG/M
3300025933|Ga0207706_10517061All Organisms → cellular organisms → Bacteria → Proteobacteria1029Open in IMG/M
3300025934|Ga0207686_10552071Not Available901Open in IMG/M
3300025939|Ga0207665_10315925All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1171Open in IMG/M
3300025940|Ga0207691_10218781All Organisms → cellular organisms → Bacteria1652Open in IMG/M
3300025940|Ga0207691_11358996Not Available585Open in IMG/M
3300025960|Ga0207651_10078283All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2371Open in IMG/M
3300025972|Ga0207668_10551296All Organisms → cellular organisms → Bacteria999Open in IMG/M
3300026067|Ga0207678_11345451Not Available632Open in IMG/M
3300026078|Ga0207702_11551976Not Available655Open in IMG/M
3300026116|Ga0207674_11600746Not Available620Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere14.42%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere13.46%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere9.62%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere9.62%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere6.73%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere5.77%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere4.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere4.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere4.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil3.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.85%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.92%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.92%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.96%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.96%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.96%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.96%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.96%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012898Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1EnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300020069Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020080Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022467Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10057403123300000364SoilAAVAFVLFIGGSGFCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRXXXETMGXDXSTHNPTGKKE*
Ga0062590_10291904613300004157SoilMHRNIRTAAVAFVLLIGGSGVCLAADTAASSTTGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE*
Ga0062594_10047292523300005093SoilMHRNIRTAAVVFVLFIGASGLSLAAETAAPSTQGVGGSPTEEGIGSTSSTHNPNPNPAAKDTGMVRRGTEVGTDSSTHNPTGKKD*
Ga0070676_1014716723300005328Miscanthus RhizosphereMHRNIRTAAVAFVLFIGGSGFCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE*
Ga0070683_10198705813300005329Corn RhizosphereMHRNIGTAAVAFILFIGASGLSLAAETAAPSTKGVGGDPTAPGIGNTSSTHNPNPNPAAKDTGMERRGADVGTDSSTHNPTGKKD*
Ga0070670_10029605813300005331Switchgrass RhizosphereIGASGLALAAETAAPSTQGVGGDPTAQGIGNTSSTHNPNPNPGSRQTGMENRGTEMGTDSSTHNPTRKKD*
Ga0070670_10160661713300005331Switchgrass RhizosphereMHRNIRTAAVAFVLLIGGSGVCLAADTAASSTTGVGGDHTAEGIGNTSSTHNPGPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE*
Ga0070666_1098938313300005335Switchgrass RhizosphereVASPKASCFEILAEESLMHRNIRTAAVAFVLLIGGSGVCLAADTAASSTTGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE*
Ga0070660_10040394313300005339Corn RhizosphereLFIGASGLALAAETAAPSTQGVGGDPTAEGIGNTSSTHNPNPNPASRQTGMEKRGTEMGNDSSTHNPTGKKE*
Ga0070689_10164326313300005340Switchgrass RhizosphereMHRNIRTAAVAFILFIGASGLALAAETAAPSTQGVGGDPTAQGIGNTSSTHNPNPNPGSRQTGMENRGTEMGTDSSTHNPTGKK
Ga0070689_10197780713300005340Switchgrass RhizosphereMHRNIRTAAVVFVLFIGASGLSLAAETAAPSTQGVGGSPTEEGIGSTSSTHNPNPNPAAKDTGMVRRGTEVGTDSSTHNPTGKK
Ga0070675_10175914013300005354Miscanthus RhizosphereMHRNIRTAAVAFILFIGASGLALAAETAAPSTQGVGGDPTAEGIGNTSSTHNPNPNPASRQTGMENRGTEMGTDSSTHNPTRKKD*
Ga0070671_10015691153300005355Switchgrass RhizosphereMHRNIRTAAVAFVLLIGGSGVCLAADTAASSTTGVGGDHTAEGIGNTSSTHNPGRNPASKQTGMENRGSAETMGTDTSTHNPTGKKE*
Ga0070671_10016168643300005355Switchgrass RhizosphereMHRNIRTAAVAFVLLIGASGLALAAETAAPSTQGVGGDPTAQGIGNTSSTHNPNPNPGSRQTGMENRGTEMGTDSSTHNPTRKKD*
Ga0070673_10051677613300005364Switchgrass RhizosphereMHRNIRTAAVAFVLLIGGSGVCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE*
Ga0070688_10025904413300005365Switchgrass RhizosphereRNIGTAAVAFVLFIGASGLSLAAETAAPSTKGVGGDPTAPGIGNTSSTHNPNPNPAAKETGMERRGADVGTDSSTHNPTGKKD*
Ga0070659_10069704713300005366Corn RhizosphereMHRNIRTAAVAFVLLIGASGLALAAETAAPSTQGVGGDPTAEGIGNTSSTHNPNPNPASRQTGMENRGTEMGTDSSTHNPTRKKD*
Ga0070659_10126374113300005366Corn RhizosphereMHRNIGTAAVALVLFIGASGLSLAAETKAPSTKGVGGNPTAPGIGNTSSTHNPNPNPAAKETGMERRGADVGTDSSTHNPTGKKD*
Ga0070667_10047779213300005367Switchgrass RhizosphereMHRNIRTAAVAFILFIGASGLALAAETAAPSTQGVGGDPTAEGIGNTSSTHNPNPNPASRQTGMENRGTEIGTDSSTHNPTGKRD*
Ga0070714_10095675113300005435Agricultural SoilMHRNIRTATVALVLFIGGSGLCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE*
Ga0070714_10221124113300005435Agricultural SoilMHRNIGTAAVAFILFIGASGLSLAAETAAPSTQGVGGDPTAEGIGNTSSTHNPNPNPASRQTGMENRGTEIGTDSGKKD*
Ga0070713_10092835523300005436Corn, Switchgrass And Miscanthus RhizosphereMHRNIGTAAVAFILFIGASGLSLAAETAAPSTKGVQGTPATGNTGSTHNPNPNAAAKETGMEPRGTEVGTDSTHNPTGKKD*
Ga0070713_10156995813300005436Corn, Switchgrass And Miscanthus RhizosphereIGASGLSLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASRQTGMENRGTEMGTDSSTHNPTGKKD*
Ga0070711_10167599813300005439Corn, Switchgrass And Miscanthus RhizosphereMHRNIRTAAVAFVLLIGGSGVCLAADTAASSTTGVGGDHTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE*
Ga0070700_10058580013300005441Corn, Switchgrass And Miscanthus RhizosphereMLRNIGTAAVAFVLFIGASGLSLAAETAAPSTKGVGGDPTAPGIGNTSSTHNPNPNPAAKETGMERRGADVGTDTSTHNPTGKKD*
Ga0070741_1064570523300005529Surface SoilMRRNIGRAVVAFLFIGGSGLCLAGETAPPPAKGVGGDPAAEGVGNTSSTHNPNPVSRQTGMENRSSEMGNDSSTHNPTGKQE*
Ga0070686_10066610213300005544Switchgrass RhizosphereMHRNIRTAAVALVLFIGGSGLCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPASKQTGMENRGSAETMGTDTSTHNP
Ga0070686_10073299313300005544Switchgrass RhizosphereMLRNIGTAAVAFVLFIGASGLSLAAETAAPSTKGVGGDPTAPGIGNTSSTHNPNPNPAAKETGMERRGADVGTDSSTHNPTGKKD*
Ga0070664_10037783413300005564Corn RhizosphereMHRNIRTAAVAFVLFIGASGLSLAAETATPSTKGVGGDPTAPGIGNTSSTHNPNPNPASRQTGMEKRGTEMGNDSSTHNPTGKKE*
Ga0070664_10119946623300005564Corn RhizosphereMHRNIRTAAVAFVLFIGGSGFCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKD*
Ga0070702_10105638313300005615Corn, Switchgrass And Miscanthus RhizosphereMHRNIRTAAVAFVLLIGGSGVCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNSNPASRQTGMENRGTEIGTDSSTHNPTGKRD*
Ga0070717_1010455743300006028Corn, Switchgrass And Miscanthus RhizosphereVHRNIRTAAVAFVLLIGGSGVCLANDTAASSTTGVGGDHTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE*
Ga0070717_1189755513300006028Corn, Switchgrass And Miscanthus RhizosphereMHRNIRTAAMALVLFIGGSGLCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTST
Ga0070716_10034575613300006173Corn, Switchgrass And Miscanthus RhizosphereVHRNIRTAAVAFVLLIGGSGVCLANDTAASSTTGVGGDHTAEGIGNTSSTHNPGPNPASKQTGMENRGSAETM
Ga0070712_10013205443300006175Corn, Switchgrass And Miscanthus RhizosphereHRNIRTAAVAFVLFIGGSGFCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE*
Ga0070712_10123826723300006175Corn, Switchgrass And Miscanthus RhizosphereVHRNIRTAAVAFVLLIGGSGVCLANDTAASSTTGVGGDHTAEGIGNTSSTHNPGPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE*
Ga0066660_1042831323300006800SoilMHRNIRTAAVAFILFIGASGLSLAADTAAPSTQGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE*
Ga0075425_10058938713300006854Populus RhizosphereMHRNIRTAAVAFVLFIGVSGLCLAAETAAPSTKGVGGDPTAEGIGNTNSTHNPSPNPASKQTGMENRGSAETMGNDTSTHNPAGKKE*
Ga0075425_10080631013300006854Populus RhizosphereMHRNIRTAAMALVLFIGGSGLCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE*
Ga0105245_1090603723300009098Miscanthus RhizosphereASEKAKLAFPKSFKKESVMHRNIRTAAVVFVLFIGASGLSLAAETAAPSTQGVGGSPTEEGIGSTSSTHNPNPNPAAKDTGMVRRGTEVGTDSSTHNPTGKKD*
Ga0105245_1321786123300009098Miscanthus RhizosphereIGASGLALAAETAAPSTQGVGGDPTAEGIGNTSSTHNPNPNPASRQTGMENRGTEIGTDSSTHNPTGKRD*
Ga0105241_1110949223300009174Corn RhizosphereMHRNIRTAAVAFVLLIGGSGVCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKD*
Ga0105241_1153635613300009174Corn RhizosphereMHRNIRTAAVAFVLFIGGSGLCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPSPNPASKQTGMENRGSAETMG
Ga0105242_1134008323300009176Miscanthus RhizosphereMHRNIRTAAVAFVLLIGASGLALAAETAAPSTQGVGGDPTAQGIGNTSSTHNPNPNPGSRQTGMENRGTEMGTDSSTHNPTGKKD*
Ga0105248_1326148423300009177Switchgrass RhizosphereGASGLALAAETAAPSTQGVGGDPTAEGIGNTSSTHNPNPNPASRQTGMENRGTEIGTDSSTHNPTGKRD*
Ga0105237_1165879013300009545Corn RhizosphereMHRNIGTAAVAFILFIGASGLSLAAETAAPSTKGVGGDPTAPGIGNTSSTHNPNPNSAAKETGMEPRGTEVGTGSSTHNPTGKKD*
Ga0105249_1086943523300009553Switchgrass RhizosphereMHRNIRTAAVAFILFIGASGLALAAETAAPSTQGVGGDPTAEGIGNTSSTHNPNPNPASRQTGMERRGTEMGNDSSTHNPTGKKE*
Ga0134128_1202010123300010373Terrestrial SoilMLRNIGTAAVAFVLFIGASGLSLAAETAAPSTKGGGGDPTAPGICNTSSTHNPNPNPAAKETGMERRGADVGTDS
Ga0105239_1040643713300010375Corn RhizosphereVRCFSKGETAFFEILSEESVMLRNIRTAAVAFVLFIGASGLSLAAETTPSTKGVGGDPTAPGIGNTSSTHNPNPNPASRQTGMEKRGTEMGNDSSTHNPTGKKE*
Ga0134127_1049401713300010399Terrestrial SoilGGSGFCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE*
Ga0134127_1204084923300010399Terrestrial SoilMHRNIRTAAVAFILFIGASGLALAAETAAPSTQGVGGDPTAEGIGNTSSTHNPNPNPASRQTGMENRGTEIGT
Ga0105246_1006930223300011119Miscanthus RhizosphereMHRNIRTAAVALVLFIGGSGLCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKD*
Ga0105246_1045964923300011119Miscanthus RhizosphereAFVLFIGGSGFCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNAASKETGMENRGSAETMGTDTSTHNPTGKKE*
Ga0150985_11917927613300012212Avena Fatua RhizosphereQNHPQESVMHRNIGKAAVAFVLFIGASGLSFAAETAAPSTNGVGGDPTAPGIGNTSSTHNPNPNPASRQTGMENRGSAETMGTDTSTHNPTGKKD*
Ga0157293_1032917013300012898SoilKASCLFEILSEETVMHRNIRTAAVALVLFIGGSGLCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE*
Ga0157374_1201153613300013296Miscanthus RhizosphereMHRNVRTAVVAFALFIGASGSALAAETVAPSKDGVGGSPTAEGIGNTSSTHNPNPNPASRQTGMENRGTEMGTDSSTHNPTGKKD*
Ga0157378_1158913923300013297Miscanthus RhizosphereQKESVMHRNVRTAVVAFALFIGASGSALAAETVAPSKDGVGGSPTAEGIGNTSSTHNPNPNPASRQTGMENRGTEMGTDSSTHNPTGKKD*
Ga0163162_1128592323300013306Switchgrass RhizosphereMHRNIRTATLALVLFISGRGFSLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKD*
Ga0157377_1091320813300014745Miscanthus RhizosphereMHRNIRTAAVAFVLLIGGSGVCLAADTAAPSTKGVGGDHTAEGIGNTSSTHNPGRNPASKQTGMENRGSAETMGTDTSTHNPTGKRD*
Ga0157376_1216591123300014969Miscanthus RhizosphereFVLLIGGSGVCLTADTAASSTTGVGGDHTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE*
Ga0132258_1162915023300015371Arabidopsis RhizosphereMHRTIGTAALAVAIFIGASGLALAAETAAPSTNGVGGDATAPGIGNNSSTHNPNPNPASRTGMENRGSAETMGTDTSTHNPTGKKE*
Ga0132258_1281927923300015371Arabidopsis RhizosphereMHRNIGTAAVAFVLLIGASGLALAAETAAPSTQGVGGDPTAPGIGNTSSTHNPNPTSDPASRQTGMENRGTEMGTDSSTHNPTGKKD*
Ga0132258_1291748813300015371Arabidopsis RhizosphereMHRNIGTAAVAFILFIGASGLSLAAETVAPSTKGVQGTPATGNTGSTHNPNPNAAAKETGMEPRGTEVGTDSSTHNPTGKKD*
Ga0132257_10308954613300015373Arabidopsis RhizosphereATVALVLFISGSGLCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE*
Ga0132255_10099451823300015374Arabidopsis RhizosphereMHRNIRTAAVALVLFIGGSGLCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE*
Ga0197907_1017425323300020069Corn, Switchgrass And Miscanthus RhizosphereFEILSEESVMHRNIRTAAVAFVLFIGASGLSLAAETATPSTKGVGGDPTAPGIGNTSSTHNPNPNPASRQTGMEKRGTEMGNDSSTHNPTGKKE
Ga0206356_1044178323300020070Corn, Switchgrass And Miscanthus RhizosphereLMHRNIRTAAVAFVLLIGGSGVCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKD
Ga0206350_1014330323300020080Corn, Switchgrass And Miscanthus RhizosphereCLFEILAEESVMHRNIRTATVALVLFISGSGLCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKD
Ga0206350_1039215123300020080Corn, Switchgrass And Miscanthus RhizosphereLFEILAEESLMHRNIRTAAVAFVLLIGGSGVCLAADTAASSTTGVGGDHTAEGIGNTSSTHNPGPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE
Ga0206350_1119487313300020080Corn, Switchgrass And Miscanthus RhizosphereAFFEILSEESVMHRNIRTAAVAFVLFIGASGLSLAAETTPSTKGVGGDPTAPGIGNTSSTHNPNPNPASRQTGMEKRGTEMGNDSSTHNPTGKKE
Ga0206354_1010857513300020081Corn, Switchgrass And Miscanthus RhizosphereAFFEILSEESVMHRNIRTAAVAFVLFIGASGLSLAAETAAPSTKGVGGDPTAPGIGNTSSTHNPNPNPASRQTGMEKRGTEMGNDSSTHNPTGKKD
Ga0206354_1146544013300020081Corn, Switchgrass And Miscanthus RhizosphereSGFSLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE
Ga0224712_1033858423300022467Corn, Switchgrass And Miscanthus RhizosphereCLFEILSEETVMHRNIRTAAVALVLFIGGSGLCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE
Ga0224712_1047028213300022467Corn, Switchgrass And Miscanthus RhizosphereMLRNIGTAAVAFVLFIGASGLSLAAETAAPSTKGVGGDPTAPGIGNTSSTHNPNPNPAAKETGMERRGADVGTDSSTHNPTGKKD
Ga0224712_1053689823300022467Corn, Switchgrass And Miscanthus RhizosphereMHRKIEIAAAALVLCISSTGLSLGAETAAPSTQGVGGDPTAPGIGNTSSTHNPNPNAAAKDTGMEPRGTEVGSDSSTHNPTGKKD
Ga0207682_1018701223300025893Miscanthus RhizosphereMHRNIRTAAVAFVLLIGASGLALAAETAAPSTQGVGGDPTAQGIGNTSSTHNPNPNPGARQTGMENRGTEMGTDSSTHNPTGKKD
Ga0207688_1080717013300025901Corn, Switchgrass And Miscanthus RhizosphereMHRNIRTAAVAFVLLIGGSGVCLAADTAAPSTKGVGGDHTAEGIGNTSSTHNPGRNPASKQTGMENRGSAETMGTDTSTHNPTGKKE
Ga0207685_1020317613300025905Corn, Switchgrass And Miscanthus RhizosphereMHRNIRTAAVAFVLLIGGSGVCLAADTAASSTTGVGGDHTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE
Ga0207654_1106998213300025911Corn RhizosphereMHRNIRTAAVVFVLFIGASGLSLAAETAAPSTQGVGGSPTEEGIGSTSSTHNPNPNPAAKDTGMVRRGTEVGTDSSTHNPTGKKD
Ga0207693_1088116023300025915Corn, Switchgrass And Miscanthus RhizosphereVHRNIRTAAVAFVLLIGGSGVCLANDTAASSTTGVGGDHTAEGIGNTSSTHNPGPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE
Ga0207657_1041678413300025919Corn RhizosphereMHRNIGTAAVALALFIGASGLCLAAETAAPSTKGVGGDPTAPGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE
Ga0207649_1076620713300025920Corn RhizosphereMHRNIRTAAVVFVLFIGASGLSLAAETAAPSTQGVGGSPTEEGIGSTSSTHNPNPNPAAKDTGMVRRGTEVGTDSSTHNPTGK
Ga0207681_1041011913300025923Switchgrass RhizosphereMHRNIRTAAVALVLFIGGSGFCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE
Ga0207650_1003193233300025925Switchgrass RhizosphereMHRNIRTAAVAFILFIGASGLALAAETAAPSTQGVGGDPTAQGIGNTSSTHNPNPNPGSRQTGMENRGTEMGTDSSTHNPTRKKD
Ga0207650_1042647813300025925Switchgrass RhizosphereASGLALAAETAAPSTQGVGGDPTAEGIGNTSSTHNPNPNPASRQTGMENRGTEIGTDSSTHNPTGKRD
Ga0207650_1089613923300025925Switchgrass RhizosphereMHRNIRTAAVAFVLLIGGSGVCLAADTAASSTTGVGGDHTAEGIGNTSSTHNPGPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE
Ga0207659_1110541413300025926Miscanthus RhizosphereMHRNIRTAAVAFILFIGASGLALAAETAAPSTQGVGGDPTAEGIGNTSSTHNPNPNPASRQTGMENRGTEIGTDSSTHNPTGKRD
Ga0207687_1110471713300025927Miscanthus RhizosphereMHRNIRTAAVAFVLLIGASGLALAAETAAPSTQGVGGDPTAEGIGNTSSTHNPNPNPAAKDTGMVRRGTEVGTDSSTHNPTGKKD
Ga0207700_1101818113300025928Corn, Switchgrass And Miscanthus RhizosphereMHRNIGTAAVAFILFIGASGLSLAAETAAPSTKGVQGTPATGNTGSTHNPNPNAAAKETGMEPRGTEVGTDSSTHNPTGKKD
Ga0207664_1181536913300025929Agricultural SoilMHRNIGTAAVAFILFIGASGLSVAAETAAPSTKGVQGTPATGNTGSTHNPNPNAAAKETGMEPRGTEVGTDSTHNPTGKKD
Ga0207664_1200293013300025929Agricultural SoilLAEESVMHRNIRTAALAFVLFIGASGLSLAAETAAPSTQGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE
Ga0207644_1010805033300025931Switchgrass RhizosphereMHRNIRTAAVAFVLLIGASGLALAAETAAPSTQGVGGDPTAQGIGNTSSTHNPNPNPGSRQTGMENRGTEMGTDSSTHNPTRKKD
Ga0207644_1054105123300025931Switchgrass RhizosphereMHRNIRTAAVAFVLLIGGSGVCLAADTAASSTTGVGGDHTAEGIGNTSSTHNPGRNPASKQTGMENRGSAETMGTDTSTHNPTGKKE
Ga0207690_1069058223300025932Corn RhizosphereMHRNIGTAAVALVLFIGASGLSLAAETKAPSTKGVGGNPTAPGIGNTSSTHNPNPNPAAKETGMERRGADVGTDSSTHNPTGKKD
Ga0207706_1051706113300025933Corn RhizosphereRNIRTAAVAFVLFIGGSGFCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE
Ga0207686_1055207113300025934Miscanthus RhizosphereMHRNIRTAAVVFVLFIGASGLSLAAETAAPSTQGVGGDPTAQGIGNTSSTHNPNPNPGSRQTGMENRGTEMGTDSSTHNPTGKKD
Ga0207665_1031592523300025939Corn, Switchgrass And Miscanthus RhizosphereMHRNIRTAAVAFVLLIGGSGVCLANDTAASSTTGVGGDHTAEGIGNTSSTHNPGPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE
Ga0207691_1021878113300025940Miscanthus RhizosphereMHRNIRTAAVAFVLLIGGSGVCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE
Ga0207691_1135899623300025940Miscanthus RhizosphereMHRNIGTAAVAFILFIGASGLAIAAETAAPSTQGVGGDPTAQGIGNTSSTHNPNPNPGSRQTGMENRGTEMGTDSSTHNPTRKKD
Ga0207651_1007828343300025960Switchgrass RhizosphereMHRNIRTAAVAFILFIGASGLALAAETAAPSTQGVGGDPTAEGIGNTSSTHNPNPNPASRQTGMENRGTEMGTDSSTHNPTGKKD
Ga0207668_1055129613300025972Switchgrass RhizosphereMHRNIGTAAVAFVLFIGGSGFCLAAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE
Ga0207678_1134545113300026067Corn RhizosphereMHRNIRTAAVAFVLLIGGSGLCLPAETAAPSTKGVGGDPTAEGIGNTSSTHNPNPNPASKQTGMENRGSAETMGTDTSTHNPTGKKE
Ga0207702_1155197613300026078Corn RhizosphereMHRNIRTAAVAFVLFIGASGLSLAAETATPSTKGVGGDPTAPGIGNTSSTHNPNPNPASRQTGMENRGTEIGTDSSTHNPTGKKD
Ga0207674_1160074623300026116Corn RhizosphereMHRNIGTAAVALALFIGASGLCLAAETAAPSTKGVGGDPTAPGIGNTSSTHNPNPNPAAKETGMERRGADVGTDSSTHNPTGKKD

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.