Metagenome / Metatranscriptome Family F097974

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097974
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	57 residues
Representative Sequence	MIDTLVTAIQSLCGAGLVLGIALSIYYGARPSKESKRFNFAKANDFETGHRRWARGR
Number of Associated Samples	66
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.47 %
% of genes near scaffold ends (potentially truncated)	16.35 %
% of genes from short scaffolds (< 2000 bps)	75.00 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.885 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (19.231 % of family members)
Environment Ontology (ENVO)	Unclassified (45.192 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.846 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.71% β-sheet: 0.00% Coil/Unstructured: 55.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01636	APH	28.85
PF13180	PDZ_2	27.88
PF13365	Trypsin_2	11.54
PF07690	MFS_1	2.88
PF02771	Acyl-CoA_dh_N	1.92
PF01717	Meth_synt_2	1.92
PF03401	TctC	0.96
PF01712	dNK	0.96
PF04773	FecR	0.96
PF09350	DJC28_CD	0.96
PF05977	MFS_3	0.96
PF03061	4HBT	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	1.92
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	1.92
COG1428	Deoxyadenosine/deoxycytidine kinase	Nucleotide transport and metabolism [F]	0.96
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.96
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.88 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.88 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.88 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	76.92 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.12 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	20.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.12 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FIHLEPW02QR639	Not Available	516	Open in IMG/M
3300004062\|Ga0055500_10015549	All Organisms → cellular organisms → Bacteria → Proteobacteria	1302	Open in IMG/M
3300004633\|Ga0066395_10201479	Not Available	1042	Open in IMG/M
3300004633\|Ga0066395_10696689	All Organisms → cellular organisms → Bacteria → Proteobacteria	603	Open in IMG/M
3300004633\|Ga0066395_10843070	All Organisms → cellular organisms → Bacteria → Proteobacteria	552	Open in IMG/M
3300005332\|Ga0066388_102430096	All Organisms → cellular organisms → Bacteria → Proteobacteria	951	Open in IMG/M
3300005332\|Ga0066388_103270557	Not Available	828	Open in IMG/M
3300005332\|Ga0066388_103808959	All Organisms → cellular organisms → Bacteria → Proteobacteria	770	Open in IMG/M
3300005332\|Ga0066388_105513608	All Organisms → cellular organisms → Bacteria → Proteobacteria	641	Open in IMG/M
3300005332\|Ga0066388_106947720	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300005332\|Ga0066388_108571376	All Organisms → cellular organisms → Bacteria → Proteobacteria	509	Open in IMG/M
3300005434\|Ga0070709_10141256	All Organisms → cellular organisms → Bacteria → Proteobacteria	1655	Open in IMG/M
3300005526\|Ga0073909_10009440	All Organisms → cellular organisms → Bacteria → Proteobacteria	2937	Open in IMG/M
3300005555\|Ga0066692_10862039	All Organisms → cellular organisms → Bacteria → Proteobacteria	556	Open in IMG/M
3300005713\|Ga0066905_101488785	All Organisms → cellular organisms → Bacteria → Proteobacteria	616	Open in IMG/M
3300005764\|Ga0066903_101952100	All Organisms → cellular organisms → Bacteria → Proteobacteria	1126	Open in IMG/M
3300005764\|Ga0066903_103099274	Not Available	900	Open in IMG/M
3300005764\|Ga0066903_103187200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	887	Open in IMG/M
3300005764\|Ga0066903_103347671	Not Available	866	Open in IMG/M
3300005764\|Ga0066903_103974442	All Organisms → cellular organisms → Bacteria → Proteobacteria	793	Open in IMG/M
3300005829\|Ga0074479_10019461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	9024	Open in IMG/M
3300005829\|Ga0074479_10807518	All Organisms → cellular organisms → Bacteria → Proteobacteria	2048	Open in IMG/M
3300006050\|Ga0075028_100481237	All Organisms → cellular organisms → Bacteria → Proteobacteria	722	Open in IMG/M
3300006172\|Ga0075018_10442050	All Organisms → cellular organisms → Bacteria → Proteobacteria	668	Open in IMG/M
3300006574\|Ga0074056_10999249	All Organisms → cellular organisms → Bacteria → Proteobacteria	592	Open in IMG/M
3300007255\|Ga0099791_10255820	Not Available	831	Open in IMG/M
3300010043\|Ga0126380_11121540	All Organisms → cellular organisms → Bacteria → Proteobacteria	672	Open in IMG/M
3300010358\|Ga0126370_10775838	Not Available	852	Open in IMG/M
3300010358\|Ga0126370_11331460	All Organisms → cellular organisms → Bacteria → Proteobacteria	675	Open in IMG/M
3300010359\|Ga0126376_11694371	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
3300010360\|Ga0126372_10552903	Not Available	1094	Open in IMG/M
3300010361\|Ga0126378_10129057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2545	Open in IMG/M
3300010362\|Ga0126377_10239449	All Organisms → cellular organisms → Bacteria → Proteobacteria	1761	Open in IMG/M
3300010362\|Ga0126377_10699379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1066	Open in IMG/M
3300010362\|Ga0126377_10965337	All Organisms → cellular organisms → Bacteria → Proteobacteria	917	Open in IMG/M
3300010362\|Ga0126377_13031125	Not Available	542	Open in IMG/M
3300010376\|Ga0126381_100972753	Not Available	1224	Open in IMG/M
3300010398\|Ga0126383_10054547	All Organisms → cellular organisms → Bacteria → Proteobacteria	3350	Open in IMG/M
3300010398\|Ga0126383_11811796	All Organisms → cellular organisms → Bacteria → Proteobacteria	699	Open in IMG/M
3300011442\|Ga0137437_1027706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1945	Open in IMG/M
3300012203\|Ga0137399_10791385	Not Available	798	Open in IMG/M
3300012685\|Ga0137397_10027054	All Organisms → cellular organisms → Bacteria → Proteobacteria	4065	Open in IMG/M
3300012929\|Ga0137404_10004806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	9056	Open in IMG/M
3300012930\|Ga0137407_10059537	All Organisms → cellular organisms → Bacteria → Proteobacteria	3136	Open in IMG/M
3300012944\|Ga0137410_10000057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	73791	Open in IMG/M
3300012944\|Ga0137410_10015906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5126	Open in IMG/M
3300012944\|Ga0137410_10034899	All Organisms → cellular organisms → Bacteria → Proteobacteria	3533	Open in IMG/M
3300012944\|Ga0137410_10039689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3322	Open in IMG/M
3300012944\|Ga0137410_10160994	All Organisms → cellular organisms → Bacteria → Proteobacteria	1717	Open in IMG/M
3300012944\|Ga0137410_10336328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1203	Open in IMG/M
3300012971\|Ga0126369_10962844	All Organisms → cellular organisms → Bacteria → Proteobacteria	940	Open in IMG/M
3300012971\|Ga0126369_11423626	Not Available	783	Open in IMG/M
3300012971\|Ga0126369_11895417	All Organisms → cellular organisms → Bacteria → Proteobacteria	684	Open in IMG/M
3300012971\|Ga0126369_13456121	All Organisms → cellular organisms → Bacteria → Proteobacteria	517	Open in IMG/M
3300015052\|Ga0137411_1170291	Not Available	1163	Open in IMG/M
3300015052\|Ga0137411_1207173	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300015245\|Ga0137409_10090223	All Organisms → cellular organisms → Bacteria → Proteobacteria	2852	Open in IMG/M
3300015245\|Ga0137409_10129461	All Organisms → cellular organisms → Bacteria → Proteobacteria	2320	Open in IMG/M
3300016294\|Ga0182041_10756530	All Organisms → cellular organisms → Bacteria → Proteobacteria	865	Open in IMG/M
3300017927\|Ga0187824_10074503	All Organisms → cellular organisms → Bacteria → Proteobacteria	1069	Open in IMG/M
3300017930\|Ga0187825_10426870	Not Available	512	Open in IMG/M
3300017939\|Ga0187775_10000206	All Organisms → cellular organisms → Bacteria → Proteobacteria	14194	Open in IMG/M
3300017939\|Ga0187775_10291621	All Organisms → cellular organisms → Bacteria → Proteobacteria	640	Open in IMG/M
3300017944\|Ga0187786_10539066	All Organisms → cellular organisms → Bacteria → Proteobacteria	537	Open in IMG/M
3300017947\|Ga0187785_10579715	All Organisms → cellular organisms → Bacteria → Proteobacteria	572	Open in IMG/M
3300017959\|Ga0187779_10088820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1849	Open in IMG/M
3300017961\|Ga0187778_10413323	Not Available	886	Open in IMG/M
3300017974\|Ga0187777_10239912	All Organisms → cellular organisms → Bacteria → Proteobacteria	1228	Open in IMG/M
3300017974\|Ga0187777_10307855	Not Available	1084	Open in IMG/M
3300018032\|Ga0187788_10078024	Not Available	1167	Open in IMG/M
3300018060\|Ga0187765_10760240	All Organisms → cellular organisms → Bacteria → Proteobacteria	642	Open in IMG/M
3300018083\|Ga0184628_10454911	Not Available	666	Open in IMG/M
3300020170\|Ga0179594_10011021	All Organisms → cellular organisms → Bacteria → Proteobacteria	2520	Open in IMG/M
3300021333\|Ga0210324_1172844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1716	Open in IMG/M
3300021333\|Ga0210324_1389752	All Organisms → cellular organisms → Bacteria → Proteobacteria	796	Open in IMG/M
3300021560\|Ga0126371_11930103	All Organisms → cellular organisms → Bacteria → Proteobacteria	709	Open in IMG/M
3300021560\|Ga0126371_12480967	All Organisms → cellular organisms → Bacteria → Proteobacteria	627	Open in IMG/M
3300025965\|Ga0210090_1059885	All Organisms → cellular organisms → Bacteria → Proteobacteria	517	Open in IMG/M
3300026452\|Ga0256821_1026870	All Organisms → cellular organisms → Bacteria → Proteobacteria	629	Open in IMG/M
3300027703\|Ga0207862_1079629	All Organisms → cellular organisms → Bacteria → Proteobacteria	986	Open in IMG/M
3300027821\|Ga0209811_10000725	All Organisms → cellular organisms → Bacteria → Proteobacteria	12502	Open in IMG/M
3300027874\|Ga0209465_10133441	Not Available	1228	Open in IMG/M
3300027874\|Ga0209465_10523650	All Organisms → cellular organisms → Bacteria → Proteobacteria	591	Open in IMG/M
3300027910\|Ga0209583_10021795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2038	Open in IMG/M
3300028802\|Ga0307503_10024857	All Organisms → cellular organisms → Bacteria → Proteobacteria	2028	Open in IMG/M
3300031226\|Ga0307497_10009618	All Organisms → cellular organisms → Bacteria → Proteobacteria	2707	Open in IMG/M
3300031720\|Ga0307469_10067986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2344	Open in IMG/M
3300031720\|Ga0307469_10169660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1662	Open in IMG/M
3300031720\|Ga0307469_10269590	Not Available	1383	Open in IMG/M
3300031795\|Ga0318557_10068516	All Organisms → cellular organisms → Bacteria → Proteobacteria	1528	Open in IMG/M
3300031820\|Ga0307473_10960919	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300031820\|Ga0307473_11556090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	503	Open in IMG/M
3300032180\|Ga0307471_100428564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1457	Open in IMG/M
3300032205\|Ga0307472_100319306	Not Available	1259	Open in IMG/M
3300032205\|Ga0307472_100434295	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300032261\|Ga0306920_100869434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1320	Open in IMG/M
3300032770\|Ga0335085_10034111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	7049	Open in IMG/M
3300033004\|Ga0335084_10009571	All Organisms → cellular organisms → Bacteria → Proteobacteria	9677	Open in IMG/M
3300033432\|Ga0326729_1059721	All Organisms → cellular organisms → Bacteria → Proteobacteria	584	Open in IMG/M
3300033433\|Ga0326726_10003315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	14769	Open in IMG/M
3300033433\|Ga0326726_10010850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	8048	Open in IMG/M
3300033502\|Ga0326731_1042766	Not Available	1070	Open in IMG/M
3300033803\|Ga0314862_0043180	All Organisms → cellular organisms → Bacteria → Proteobacteria	957	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.54%
Aquatic	Environmental → Aquatic	13.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.69%
Sediment	Environmental → Aquatic → Sediment	6.73%
Marine	Environmental → Aquatic → Marine	3.85%
Peat	Environmental → Terrestrial → Peat	3.85%
Freshwater	Environmental → Aquatic → Freshwater	2.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.92%
Loam	Environmental → Terrestrial → Soil → Loam	18.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.88%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.92%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.88%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.92%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.96%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.96%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	19.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	17.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.38%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	9.62%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.69%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	3.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.92%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.92%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.92%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.96%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.96%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.96%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021333	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.191 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025965	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026452	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PU4	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033432	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fraction	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033502	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF9FY SIP fraction	Environmental	Open in IMG/M
3300033803	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_04952070	2070309004	Green-Waste Compost	MMDMLVTTIQSLCGAGLILGIALSVYSGARPTKETKRFDFATANDFETGHRRWGRRR
Ga0055500_100155492	3300004062	Natural And Restored Wetlands	MMDTLVTAIQSMCAAGLVLGIVLSLYQGARPRSESKGFDYATANDFETGHRRWGRGRR*
Ga0066395_102014791	3300004633	Tropical Forest Soil	MIETLIVAIQSLCGAGLVFGIALSIYSGARPAAKETKRFDFATANDFETGHRRW
Ga0066395_106966891	3300004633	Tropical Forest Soil	MIDTLVTAIQSFCGAGLVIGIALSIYYGARPNKQSKRFNFAIANDFEPGHRRWARGR*
Ga0066395_108430702	3300004633	Tropical Forest Soil	MIDMLVTAVQSLCGAGLVLGIALSVYCGARPTKETKRFDFATANDFETGHRRWKRRR*
Ga0066388_1024300962	3300005332	Tropical Forest Soil	TKTMIETLIVAIQSLCGAGLVFGIALSIYSGARPAAKETKRFDFATANDFETGHRRWVRGR*
Ga0066388_1032705571	3300005332	Tropical Forest Soil	MIDTLVTAIQSLCGAGLVLGIALSIYTGARPTKDSKRFNFAVANDFETGHRRWSRGR*
Ga0066388_1038089592	3300005332	Tropical Forest Soil	MLETLITAMQSLCGLGLVLGIALSLFQAARPSRESKRFNFAVANDFETGHRRWARSR*
Ga0066388_1055136081	3300005332	Tropical Forest Soil	MIDTIVTAIQSLCGAGLVLGIALSIYQGARPRSESRGLDYATANDFETGHRRWIKKGR*
Ga0066388_1069477201	3300005332	Tropical Forest Soil	MIDTLVTAIQSFCGAGLVIGIALSIYYGARPSKESKRFNFAVANDFEPGHRRWSRGR*
Ga0066388_1085713762	3300005332	Tropical Forest Soil	MIDTVVTAMQSLCGVGLILGIALSVYAGARPTKEAKRFTFATANDFETGHRRWARRRR*
Ga0070709_101412562	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MMNTLITAIQSLCGAGLVLGISLCLYHAARPRNQAERFDYATANDFETGHRRWSRRR*
Ga0073909_100094403	3300005526	Surface Soil	MVETLITAMQSLCGAGLVLGIALSLYQGARPSKESKPFAFSTANDFETGHRRWARTR*
Ga0066692_108620391	3300005555	Soil	MVETLITAVQSLCGAGLVLGIALSLYQGARPSKESKRFSFSTANDFETGHRRWARSR*
Ga0066905_1014887852	3300005713	Tropical Forest Soil	MIETLIVAIQSLCGAGLVFGIALSIYSGARPAAKETKRFDFATANDFETGHRRWVRGR*
Ga0066903_1019521002	3300005764	Tropical Forest Soil	MMDMVVTTIQSLCGAGLVLGIALSVYCGARPSKETKRFDFATANDFETGHRRWARGR*
Ga0066903_1030992741	3300005764	Tropical Forest Soil	MIETLIVAIQSLCGAGLVFGIALSIYSGARPSQDNKRFDLATAHDFETGHRRWTRGR*
Ga0066903_1031872002	3300005764	Tropical Forest Soil	GKTMIDTLVTAIQSLCGAGLVLGIALSIYTGARPSKDSKRFNFAVANDFEPGHRRWSRGR
Ga0066903_1033476712	3300005764	Tropical Forest Soil	MIDTLITAVQSFCGAGLVIGIALSIYYGARPNKQSKRFNFAIANDFEPGHRRWSRGR*
Ga0066903_1039744422	3300005764	Tropical Forest Soil	MMDTLITAVQSLCGAGLVLGIALSVYCGARPTRETKRFDYATANDFETGHRRWSRRR*
Ga0074479_100194616	3300005829	Sediment (Intertidal)	MIEVLVTAIQSMCGAGLVLGIALSLYQGARPRNESRGFDYATANEFETGNRRWGRGRR*
Ga0074479_108075183	3300005829	Sediment (Intertidal)	MIEVLVTAIQSLCGAGLVLGIALSLYQGARPRSESRGFDYATANDFETGHRRWSRGRR*
Ga0075028_1004812371	3300006050	Watersheds	ETLVTAIQSLCGAGLVLGVALSLYQGARPREESKGFDYATANDFETGHRRWGRGR*
Ga0075018_104420501	3300006172	Watersheds	MIETLVTAIQSLCGAGLVLGVALSLYQGARPREESKGFDYATANDFETGHRRWGRGR*
Ga0074056_109992491	3300006574	Soil	AGLVLGIVLSLYQGARPRSESKGFDYATATDLETGHRRWARRARR*
Ga0099791_102558202	3300007255	Vadose Zone Soil	MVETLITAMQSLCGVGLVLGIALSLYQGARPSKESKRFTFATANDFETGHRRWSRTR*
Ga0126380_111215401	3300010043	Tropical Forest Soil	MIDTLVTALQSLCGAGLVIGIALSIYHGARPSKQSKRFNFAVANDFEPGHRRWSRGR*
Ga0126370_107758382	3300010358	Tropical Forest Soil	MIETIVTAIQSLCGAGLVLGIALSIYQGARPRSESRGLDYATANDFETGHRRWIKKGR*
Ga0126370_113314602	3300010358	Tropical Forest Soil	MIDTLVTAVQSFCGAGLVIGIALSIYYGARPNKQSKRFNFAIANDFEPGHRRWSRGR*
Ga0126376_116943712	3300010359	Tropical Forest Soil	MIDTIVTAIQSLCGAGLVLGIVLSIYQGARPRSESRGLDYATANDFETGHRRWIKKGR*
Ga0126372_105529032	3300010360	Tropical Forest Soil	MIDTLVTAVQSLCGAGLVIGIALSIYHGARPSKESKRFSFAIANDFEPGHRRWSRGR*
Ga0126378_101290573	3300010361	Tropical Forest Soil	MIDTLVTAIQSLCGAGLVLGIALSIYHGARPSKDSRRFKFAVANDFETGHRRWSRRR*
Ga0126378_132253881	3300010361	Tropical Forest Soil	NRNPEHSGSEEATNMIDTLVTAIQSFCGAGLVIGIALSIYHGARPSKQSKRFNFAVANDFEPGHRRWSRGR*
Ga0126377_102394494	3300010362	Tropical Forest Soil	VTAIQSLCGAGLVLGIALSIYTGARPSKESKRFNFAVANDFETGHRRWSRGR*
Ga0126377_106993792	3300010362	Tropical Forest Soil	MDTMIDTLVTAVQSLCGVGLILGIALSVYAGARPTKEAKRFTFATANDFETGHRRWGRRR
Ga0126377_109653372	3300010362	Tropical Forest Soil	MIDTIVTAIQSLCGAGLVLGIALAIYQGARPRSETRGLDYATANDFEPGHRRWIRKRR*
Ga0126377_130311252	3300010362	Tropical Forest Soil	MIDTLVTAIQSLCGAGLVIGIALSMYHGARPSKDSKRFNFAKANDFETGHR
Ga0126381_1009727531	3300010376	Tropical Forest Soil	MIDTLVTAIQSLCGAGLVLGIALSIYHGARPTKDSKRFKFAVANDFETGHRRWSRRR*
Ga0126383_100545474	3300010398	Tropical Forest Soil	MIDTLVTAVQSLCGAGLVIGIAFSIYHGARPSKQSKRFNFAIANDFEPGHRRWARGR*
Ga0126383_118117962	3300010398	Tropical Forest Soil	CGAGLVIGIALSIYHGARPSKQSKRFNFAVANDFEPGHRRWSRGR*
Ga0137437_10277061	3300011442	Soil	MMETLVTAIQSLCGAGLVLGVALSLYQGARPREESKGFDYATANDFETGHRRWGRGR*
Ga0137399_107913851	3300012203	Vadose Zone Soil	MVETLITAMQSLCGAGLVLGIALSLYQGARPSKESKRFGFATANDFETGHRRWTRTR*
Ga0137397_100270543	3300012685	Vadose Zone Soil	MIQTLITALQSLCGVGLVLGISLCLYNAARPSNEQKRFTFASSNDFETGHRRWGR*
Ga0137404_100048064	3300012929	Vadose Zone Soil	MVETLITAMQSLCGAGLVLGIALSLYQGARPSKESKRFGFTTANDFETGHRRWTRTR*
Ga0137407_100595373	3300012930	Vadose Zone Soil	MVETLITAMQSLCGAGLVLGIALSLYQGARPSKESKRFGFATANDLETGHRRWTRTR*
Ga0137410_1000005721	3300012944	Vadose Zone Soil	MIDTLVTAIQSLCGAGLVLGIALSIYYGARPSKESKRFNFAKANDFETGHRRWARGR*
Ga0137410_100159063	3300012944	Vadose Zone Soil	MMETLITAIQSLCGAGLVLGVALSLYQGARPREESKGFDYATANDFETGHRRWGRGR*
Ga0137410_100348992	3300012944	Vadose Zone Soil	MVETLITAMQSLCGAGLVLGIALSLYQGARPSKDSKPFAFSTANDFETGHRRWARTR*
Ga0137410_100396893	3300012944	Vadose Zone Soil	MQSLCGVGLVLGIALSVYCGARPTKENKRFNFATANDFETGHRRWGRGR*
Ga0137410_101609942	3300012944	Vadose Zone Soil	MMEALVTAIQSLCGAGLVLGIALSLYQGVRPREESKGFDYATTNDFETGHRRWGRGR*
Ga0137410_103363282	3300012944	Vadose Zone Soil	MVETLITAIQSLCGAGLVLGIALSLYQGARPSKESKRFSFSAANDFETGHRRWARSR*
Ga0126369_109628442	3300012971	Tropical Forest Soil	MMDMLVTAIQSLCGAGLILGIALSVYSGARPTKETKRFDFATANDFETGHRRWGRRR*
Ga0126369_114236261	3300012971	Tropical Forest Soil	MLDTLVTAIQSLCGAGLVIGIALSIYYGARPTKENKRFNFATANDFETGHRRWGRGR*
Ga0126369_118954172	3300012971	Tropical Forest Soil	VTAIQSLCGAGLVLGIALSIYYGARPSKENKRFNFATANDFETGHRRWGRGR*
Ga0126369_134561212	3300012971	Tropical Forest Soil	LGNEEGKTMIDTLITAIQSLCGAGLVLGIALSIYTGARPSKDSKRFKFAVANDFEPGHRRWSRGR*
Ga0137411_11702912	3300015052	Vadose Zone Soil	GIALSVYCGARPTKENKRFNFATANDFETGHRRWGRGR*
Ga0137411_12071732	3300015052	Vadose Zone Soil	FGRAEEKSTMIDTLVTAIQSLCGAGLVLGIALSIYYGARPSKESKRFNFAKANDFETGHRRWARGR*
Ga0137409_100902231	3300015245	Vadose Zone Soil	MVETLITAMQSLCGAGLVLGIALSLYQGARPSKESKPFAFSTANDFETG
Ga0137409_101294611	3300015245	Vadose Zone Soil	SLCGVGLVLGIALSLYQGARPSKESKRFTFATANDFETGHRRWARTR*
Ga0182041_107565302	3300016294	Soil	MIDTLVTAIQSLCGAGLVLGIALSIYTGARPSKDFKRFNFAVANDFEPGHRRWSRGR
Ga0187824_100745032	3300017927	Freshwater Sediment	MMEALVTAIQSLCGIGLVLGIVLSLYQGARPRVGAKGFDYATANDFETGHRRWGRRR
Ga0187825_104268702	3300017930	Freshwater Sediment	TAVQSLCGVGLVLGIALSLYQGARPRDGAKGFDYATANDFETGHRRWGRRR
Ga0187775_100002063	3300017939	Tropical Peatland	MMDMLVTAIQSLCGAGLILGIVLSVYSGARPTKETRRFDYATANDFETGHRRWGRRR
Ga0187775_102916212	3300017939	Tropical Peatland	MMDILVTAIQSLCGAGLVLGIVLCLYQSARPRSETRGLDYATANDFETGHRRWVRKRR
Ga0187786_105390662	3300017944	Tropical Peatland	MMDMLVTAVQSLCGAGLVLGIALSVYCGARPTKESKRFDYATANDFETGHRRWGRRR
Ga0187785_105797151	3300017947	Tropical Peatland	MMDMLVTAVQSLCGAGLVLGIALSVYCGARPSKESKRFDYATANDFETGHRRWGRRR
Ga0187779_100888202	3300017959	Tropical Peatland	MMDMLVTAVQSLCGAGLVLGIALSVYCGARPTKEAKRFDYATANDFETGHRRWGRRR
Ga0187778_104133231	3300017961	Tropical Peatland	MMDMLVTTVQSLCGAGLVLGIALSVYCGARPTKETKRFDYATANDFETGHRRWARKRR
Ga0187777_102399122	3300017974	Tropical Peatland	MMDMLVTAVQSLCGAGLVLGIALSVYCGARPTKETKRFDYATANDFETGHRRWGRRR
Ga0187777_103078551	3300017974	Tropical Peatland	MMEALVTAIQSMCGAGLVLGIALSLYQGARPRDKSKGFDYATANDFETGHRRWGRRR
Ga0187788_100780242	3300018032	Tropical Peatland	MMDILVTAIQSLCGAGLVLGIVLCLYQSARPRSETRGLDYATANDFETGHRRWGRRR
Ga0187765_107602401	3300018060	Tropical Peatland	MMEALVTGIQSLCGIGLVLGIALSLYQGARPRDAGAKGFDYATANDFETGHRRWGRRR
Ga0184628_104549112	3300018083	Groundwater Sediment	MMDTLVTAVQSLCAAGLVLGIALSLYQGARPRSESRGFDYSTANDFETGHRRWGRGRR
Ga0179594_100110213	3300020170	Vadose Zone Soil	MVETLITAMQSLCGAGLVLGIALSLYQGARPSKESKRFGFATANDFETGHRRWTRTR
Ga0210324_11728441	3300021333	Estuarine	MIEVLVTAIQSMCGAGLVLGIALSLYQGARPRNESRGFDYATANEFETGNRRWGRGRR
Ga0210324_13897522	3300021333	Estuarine	MIEVLVTAIQSLCGAGLVLGIALSLYQGARPRSESRGFDYATANDFETGNRRWGRGRR
Ga0126371_119301032	3300021560	Tropical Forest Soil	MIDTLVTAIQSLCGAGLVLGIALSIYTGARPTKDSKRFNFAVANDFETGHRRWSRGR
Ga0126371_124809672	3300021560	Tropical Forest Soil	MIDTLVTAIQSFCGAGLVIGLALFIYHGARPSKQSKRFNFAIANDFEPGHRRWSRGR
Ga0210090_10598851	3300025965	Natural And Restored Wetlands	MMDTLVTAIQSMCAAGLVLGIVLSLYQGARPRSESKGFDYATANDFETGHRRWGRGRR
Ga0256821_10268702	3300026452	Sediment	MMDTLVTAIQSLCGAGLVLGVALSLYQGARPREDSKGFDYSTANDFETGHRRWGRKR
Ga0207862_10796292	3300027703	Tropical Forest Soil	MLDMLVTAIQSLCGAGLILGIALSVYSGARPTKEAKRFDYATANDFETGHRRWGRRR
Ga0209811_100007252	3300027821	Surface Soil	MVETLITAMQSLCGAGLVLGIALSLYQGARPSKESKPFAFSTANDFETGHRRWARTR
Ga0209465_101334412	3300027874	Tropical Forest Soil	MIETLIVAIQSLCGAGLVFGIALSIYSGARPAAKETKRFDFATANDFETGHRRWSRGR
Ga0209465_105236502	3300027874	Tropical Forest Soil	MIDTLVTAIQSFCGAGLVIGIALSIYHGARPSKQSKRFNFAVANDFEPGHRRWSRGR
Ga0209583_100217952	3300027910	Watersheds	MIETLVTAIQSLCGAGLVLGIALSLYQGARPRAESRGFDYATANDFEPGHRRWGRSR
Ga0307503_100248573	3300028802	Soil	MMETLITAIQSLCGAGLVLGIALSLYQGARPRDEAKGFDYATANDFETGHRRWGRSRYSR
Ga0307497_100096182	3300031226	Soil	MIDTLVTAIQSLCGAGLVFGIALSIYHGARPSKERKRFNFATANDFETGHRRWARGR
Ga0307469_100679863	3300031720	Hardwood Forest Soil	MIDTLVTAMQSLCGVGLVLGIVLSVYCGARPTKETKRFNFATANDFETGHRRWSRGR
Ga0307469_101696601	3300031720	Hardwood Forest Soil	MIDTLVTAMQSLCGVGLVLGIALSVYCGARPTKESKRFNFATANDFETGHRRWGRGR
Ga0307469_102695902	3300031720	Hardwood Forest Soil	MIQTLITAIQSLCGVGLVLGISLCLYNAARPRDEAKRFDYATANDFETGHRRWSRGR
Ga0318557_100685161	3300031795	Soil	MIDTLVTAIQSLCGAGLVLGIALSIYTGTRPSKDFKRFNFAVANDFEPGHRRWSRGR
Ga0307473_109609192	3300031820	Hardwood Forest Soil	MIDTLVTAMQSLCGVGLVLGIALSVYCGARPTKESKRFNFATANDFETGH
Ga0307473_115560902	3300031820	Hardwood Forest Soil	MVETLITAAQSLCGVGLVLGIALSLYQGARPSKESKRFTFATANDFETGHRRWTRTR
Ga0307471_1004285642	3300032180	Hardwood Forest Soil	MMETLVTAIQSMCGAGLVLGIALSLYQGARPRDKSKDFDYATANDFETGHRRWGRRR
Ga0307472_1003193061	3300032205	Hardwood Forest Soil	MIDTLVTAMQSLCGVGLILGIALSVYCGARPTKESKRFNFATANDFETGHRRWGRGR
Ga0307472_1004342952	3300032205	Hardwood Forest Soil	MVETLITAMQSLCGVGLVLGIALSLYQGARPSKESKRFTFATANDFETGHRRWSRTR
Ga0306920_1008694342	3300032261	Soil	MIDTLVTAIQSLCGAGLVLGIALSIYTGARPSKDSKRFNFAVANDFEPGHRRWSRGR
Ga0335085_100341112	3300032770	Soil	MMDMLVTAIQSLCGAGLILGIVLSVYSGARPTRETKRFDYATANDFETGHRRWGRRR
Ga0335084_100095715	3300033004	Soil	MIETLVTAIQSLCGAGLVLGVALSLYQGARPSEESKGFDYATANDFETGHRRWGRSR
Ga0326729_10597211	3300033432	Peat Soil	MMDALVTAIQSLCGAGLVLGVALSLYQGARPRKESEGFGFDYATANDLETGHRRRGRKR
Ga0326726_1000331510	3300033433	Peat Soil	MMDTLVTAIQSLCGAGLVLGLALSLYQGARPREENKGLDYTAANDFETGRRWVRGR
Ga0326726_100108507	3300033433	Peat Soil	MMDILVTAIQSLCGVGLVLGIVLSLYQGARPPTETRGFDYATANDFETGHRRWMRSRR
Ga0326731_10427661	3300033502	Peat Soil	SLCGAGLVLGVALSLYQGARPRKESEGFGFDYATANDLETGHRRRGRKR
Ga0314862_0043180_760_933	3300033803	Peatland	METLITAMQSLCAVGLIAGIALSLYQAARPCAKTRAFDYAIANDFETGHRRWARKRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097974

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences