Metagenome / Metatranscriptome Family F097986

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F097986
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	137 residues
Representative Sequence	MSEQSIASGQEFGSRDSDPADPIVANLQQSANLANENCDRAVALAQTLSAQLREAQDRINQLEREADGNFDNLLAEAKAAIQEVQFNADARVNRTIREADERIARLKAEAQNQIGRLQNELAQATRGID
Number of Associated Samples	85
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.88 %
% of genes near scaffold ends (potentially truncated)	88.46 %
% of genes from short scaffolds (< 2000 bps)	94.23 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (99.038 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.923 % of family members)
Environment Ontology (ENVO)	Unclassified (31.731 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.269 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 66.88% β-sheet: 0.00% Coil/Unstructured: 33.12%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01225	Mur_ligase	1.92
PF07813	LTXXQ	0.96
PF04972	BON	0.96
PF01797	Y1_Tnp	0.96
PF02735	Ku	0.96
PF00005	ABC_tran	0.96
PF02518	HATPase_c	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	3.85
COG0769	UDP-N-acetylmuramyl tripeptide synthase	Cell wall/membrane/envelope biogenesis [M]	1.92
COG0770	UDP-N-acetylmuramyl pentapeptide synthase	Cell wall/membrane/envelope biogenesis [M]	1.92
COG0773	UDP-N-acetylmuramate-alanine ligase MurC and related ligases, MurC/Mpl family	Cell wall/membrane/envelope biogenesis [M]	1.92
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.96
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.04 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.04 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.04 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	95.19 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	94.23 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.96 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	92.31 %
Betaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis	0.96 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	92.31 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	0.96 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	92.31 %
Candidatus Accumulibacter aalborgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter aalborgensis	0.96 %
Unclassified	root	N/A	0.96 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig23899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1152	Open in IMG/M
3300000955\|JGI1027J12803_108680613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1445	Open in IMG/M
3300001545\|JGI12630J15595_10002452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4042	Open in IMG/M
3300001661\|JGI12053J15887_10033725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2878	Open in IMG/M
3300002245\|JGIcombinedJ26739_100475326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1127	Open in IMG/M
3300003505\|JGIcombinedJ51221_10311672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	640	Open in IMG/M
3300005165\|Ga0066869_10092535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
3300005332\|Ga0066388_101521958	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300005602\|Ga0070762_10341449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	953	Open in IMG/M
3300005610\|Ga0070763_10454767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	727	Open in IMG/M
3300005764\|Ga0066903_101060061	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300005764\|Ga0066903_103631066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	831	Open in IMG/M
3300006046\|Ga0066652_101036921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	778	Open in IMG/M
3300006172\|Ga0075018_10153556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1064	Open in IMG/M
3300006176\|Ga0070765_100777808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	904	Open in IMG/M
3300006176\|Ga0070765_101963141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	548	Open in IMG/M
3300007258\|Ga0099793_10672759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300009143\|Ga0099792_10204141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1126	Open in IMG/M
3300009678\|Ga0105252_10607844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300010366\|Ga0126379_11934791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	693	Open in IMG/M
3300011106\|Ga0151489_1495454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	765	Open in IMG/M
3300012208\|Ga0137376_11762963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300012359\|Ga0137385_10812289	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300012924\|Ga0137413_10622709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	810	Open in IMG/M
3300012927\|Ga0137416_10441650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter aalborgensis	1110	Open in IMG/M
3300012951\|Ga0164300_10250770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	899	Open in IMG/M
3300012957\|Ga0164303_10695911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	684	Open in IMG/M
3300012961\|Ga0164302_11398061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	571	Open in IMG/M
3300012961\|Ga0164302_11747548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300012984\|Ga0164309_11432314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300012986\|Ga0164304_11175234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	618	Open in IMG/M
3300012989\|Ga0164305_11741633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300016294\|Ga0182041_10433256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1126	Open in IMG/M
3300016294\|Ga0182041_11761923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300016294\|Ga0182041_11842489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300016319\|Ga0182033_11338498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	644	Open in IMG/M
3300016319\|Ga0182033_11742506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	565	Open in IMG/M
3300016357\|Ga0182032_10356655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1171	Open in IMG/M
3300016357\|Ga0182032_11065059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	692	Open in IMG/M
3300016371\|Ga0182034_11269818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	642	Open in IMG/M
3300016387\|Ga0182040_11861742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300016404\|Ga0182037_10798963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	813	Open in IMG/M
3300016404\|Ga0182037_10837137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	795	Open in IMG/M
3300018433\|Ga0066667_11275814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641	Open in IMG/M
3300018468\|Ga0066662_11281336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	749	Open in IMG/M
3300020580\|Ga0210403_10631831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	863	Open in IMG/M
3300021168\|Ga0210406_10065017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3152	Open in IMG/M
3300021168\|Ga0210406_11202513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300021170\|Ga0210400_10591816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	915	Open in IMG/M
3300021171\|Ga0210405_11281926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300021178\|Ga0210408_10930274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M
3300021401\|Ga0210393_10371416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1165	Open in IMG/M
3300021401\|Ga0210393_11417071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300021404\|Ga0210389_11480976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300021405\|Ga0210387_10428219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1174	Open in IMG/M
3300021405\|Ga0210387_10599063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	979	Open in IMG/M
3300021405\|Ga0210387_11307541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	626	Open in IMG/M
3300021406\|Ga0210386_10253076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1503	Open in IMG/M
3300021479\|Ga0210410_10551189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1027	Open in IMG/M
3300021559\|Ga0210409_11307628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300025898\|Ga0207692_10752103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	635	Open in IMG/M
3300025929\|Ga0207664_11225804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	669	Open in IMG/M
3300025939\|Ga0207665_11668882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300027174\|Ga0207948_1007154	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300027635\|Ga0209625_1126247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300027645\|Ga0209117_1095470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	818	Open in IMG/M
3300027681\|Ga0208991_1092174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	910	Open in IMG/M
3300027855\|Ga0209693_10560415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300027903\|Ga0209488_10274137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1262	Open in IMG/M
3300028047\|Ga0209526_10101428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2025	Open in IMG/M
3300028047\|Ga0209526_10700066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300028047\|Ga0209526_10719087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300028828\|Ga0307312_11085426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300028906\|Ga0308309_10268830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1433	Open in IMG/M
3300030991\|Ga0073994_12235484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	710	Open in IMG/M
3300031231\|Ga0170824_121682988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	739	Open in IMG/M
3300031231\|Ga0170824_126508551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	827	Open in IMG/M
3300031446\|Ga0170820_11018153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	669	Open in IMG/M
3300031446\|Ga0170820_12895529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300031474\|Ga0170818_106559529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	748	Open in IMG/M
3300031561\|Ga0318528_10451884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	690	Open in IMG/M
3300031573\|Ga0310915_10012276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5012	Open in IMG/M
3300031668\|Ga0318542_10728976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300031719\|Ga0306917_10608407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	859	Open in IMG/M
3300031744\|Ga0306918_10073815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2352	Open in IMG/M
3300031744\|Ga0306918_10210422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1470	Open in IMG/M
3300031770\|Ga0318521_11035135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300031771\|Ga0318546_10555201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	807	Open in IMG/M
3300031879\|Ga0306919_10227206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1397	Open in IMG/M
3300031890\|Ga0306925_12013553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300031910\|Ga0306923_10680943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1147	Open in IMG/M
3300031910\|Ga0306923_11015418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	900	Open in IMG/M
3300031941\|Ga0310912_10352123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1144	Open in IMG/M
3300031941\|Ga0310912_11380643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300031942\|Ga0310916_10529412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1003	Open in IMG/M
3300031946\|Ga0310910_10635895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	845	Open in IMG/M
3300031947\|Ga0310909_10614135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	908	Open in IMG/M
3300031954\|Ga0306926_10826248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1115	Open in IMG/M
3300032001\|Ga0306922_12227443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300032055\|Ga0318575_10600374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300032180\|Ga0307471_102671370	Not Available	633	Open in IMG/M
3300032261\|Ga0306920_101899165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	837	Open in IMG/M
3300033289\|Ga0310914_11321321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	624	Open in IMG/M
3300034113\|Ga0364937_011247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1366	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.04%
Engineered	Engineered	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.12%
Aquatic	Environmental → Aquatic	1.92%
Modeled	Engineered → Modeled	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.15%
Sediment	Environmental → Aquatic → Sediment	1.92%
Floodplain	Environmental → Terrestrial → Floodplain	0.96%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.04%
Loam	Environmental → Terrestrial → Soil → Loam	22.12%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.96%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.92%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.96%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.73%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.96%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.96%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034113	Sediment microbial communities from East River floodplain, Colorado, United States - 7_s17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0899.00001960	2166559005	Simulated	MSEQSVPLGQEFGSRNSVPADPIVANLQQSANLANENCDRAVALAQTLSAQLREAQDRINQLEREADWAWRAVAREARAIIQEVQSNADGRVKRTIREADERIDRLEAEAKNQISRLQNELAQATGGTDLVKAEAGKHIESIKMEADARVDAVETEARSVSTSSDAKTRIKSSVSRPTSRRPKIARTVPSSG
JGI1027J12803_1086806134	3300000955	Soil	MNFVLGKSASMSEQAAVSEQEFGSRHSDPADPAFIIANLQQSANLANENCDRAVALAHELSADLREARERINQLEREADSFFDQLSKAKAANQDVQSNADTRVTGTIREAEERIARLKTEAENQIGRLQNELAQATRETDQVKAEADKRIECVKMEADA
JGI12630J15595_100024528	3300001545	Forest Soil	MSEQSIASGQEFGSLDSDPADPAFVANLQQSANLANENCDRAVALAHKLSAQLQEAEDRINQLERERDGFFDQLLAEAKAAIQDVQSNADARLNRTIREADERIARLKAEAENQIGHLHNELAQATRGIDQIKAEADKRIECVEMETDARVAGVEAEAKKRIDLMQRENEHKV
JGI12053J15887_100337256	3300001661	Forest Soil	MSEQSIASGQEFGSRDSDPADPIVANLQQSAKLANENCDRAVALNQTLSAQLREAQDRINQLEREADELGEQLLVEARAIIQDVQSNADATINRTIREADERIARLKAEAENQIGCLQNKLAQATRGTDQVKGEADKRIECVK
JGIcombinedJ26739_1004753261	3300002245	Forest Soil	MSEQSIASXQEFGSRDSDPADPXVANLQQSAKLANENCDRAVTLNQTLSAQLREAQDRINQLERXADELGXQLLVEARAIIQDVQSNADATINRTIREADERIARLKAEAENQIGCLQNKLAQATRGTDQVKGEADKRIECVKMETDARVASVETD
JGIcombinedJ51221_103116721	3300003505	Forest Soil	MSEQSVXLGQEFGSRNSVPADPIVANXQQSANLXNENCDRAVALAQTLSXQLREAQDRINQLEREADGLGDKLXAEAKAIIQEVQSRADARVNRTAREADERMDRLKAEAQNQIGRLQNGLAQATQGIDQVKAEAGKRIESVKMEADARVDAVEA
Ga0066869_100925351	3300005165	Soil	MSEQSIDSGQEFGSRESDPADPIVANLQQSAKLANENCDRAIALNQTLSAQLREAQDRINQLEREADELGEQLLVEARAIIQDVQSNADATVNRTIREADERIARLKAEAENQIGRLQNELAQATRGTDQVKGEVDKRIECVKMETDARVASVETDAKKRID
Ga0066388_1015219583	3300005332	Tropical Forest Soil	MSEQSVPLGQEFGSGDPDPADPVVANLQQSTNLANENCDRVLALAQTLSAQLRKAQNRINQLEREAEGLGDQLLAEAKAIIEEVRSNADARVNRTIREADERIDRLKA
Ga0070762_103414492	3300005602	Soil	MSEQSIASGQKFGSRDSDPADPVVANLQQSAKLANENCDRAVALNQTMSAQLREAQDRINQLEREAAELGEQLLIEARAIIQEVQSNADARVNRTIRETDERIDRLKAEAQNQISRLQNELA*
Ga0070763_104547672	3300005610	Soil	MIEQSIASGQEFGGRDSDPADPIVANLQQSAKLANENCDRAIALNQTLSAQLREAQDRINQLEREADGLGEQLLVEARAIIQDVQSNADATVNRTIREADERIAG*
Ga0066903_1010600613	3300005764	Tropical Forest Soil	MSEHSVRLGHGFGSGASDPADPVVANLQQSANLANENCEQVVALAQMLSAQLREAQDRINQLEREAEGIGDQLLAEAKVIILEARSNADARVNRTIREADERIDRLKA
Ga0066903_1036310661	3300005764	Tropical Forest Soil	MSGYSADLKQEFGSRDSVPTDAMVANLQESANLANENCDRAVALAQTLSAQLREAQDRIDQLEREADGLGNQLLAEAKAIIQEVQSKADARVHRTI
Ga0066652_1010369212	3300006046	Soil	MSEHSVPLGQQFGSGDADPADPVVAKLQQSASLANENCDRAVALAQTLSAQLREAQDRINQLEREAEGVGDQLLAEAKAIIQEVRSDADARVNRTIRESEERIDRLKADAQNQIGRLQNELAQATRRIDHVKDEAGTRIESVKIEADARVDTAETEAKKRVDVIRRESEDKVLRLEANLTEAK
Ga0075018_101535562	3300006172	Watersheds	MSEQSIASGQEFGSRDSDPADPIVANLQQSAKLANENCDRAVALNQTLSAQLREAQDRINHLEREADELGEQLLVEARAIIQDVQSNAEATVNRTIREADERIARLKAEAENQIRRLQSELAQATGGTDQVQGEANKRIKCAKMEMDARVASVET
Ga0070765_1007778081	3300006176	Soil	MSEQSIDSRQEFGSRESDPADPIVANLQQSAKLANENCDRAIALNQTLSAQLREAQDRINQLEREADGLGEQLLVEARAIIQDVQSKADATVKRALWEADERIARLKAEAENQIGRLQNELAQATRGTDRVKCEADKRIECVKMETDARVASVETDAKKRIDLMRRENE
Ga0070765_1019631411	3300006176	Soil	GSRVPDPADPAFVANLQDSADLANENCDRAVALAHKLSAQLREAQDRINQLEREADGLCDQFLAEAKAVIQEVQSNADARVNRITREADGRIARQKAEAQIEIGRLQDEVVQATRGIEQVKAEADKYIERIKIEADARVAGVEAEAKKRIDLMQRENEHKVIRLEADLGEAKNRADRAEQWL
Ga0099793_106727591	3300007258	Vadose Zone Soil	MSEQSIASGQEFGSRDSDPADPIVANLQQSAKLANENCDRAVALNQTLSAQLREAQDRINQLEREADELGEQLLVEARAIIQDVQSNADATINRTIREADERIARLKAEAENQIGCLQNKLAQATRGTDQVKGEVDKRIECVKMETDAR
Ga0099792_102041412	3300009143	Vadose Zone Soil	MSEQSIASGQEFGSRDSDPADPIVANLQQSANLANENCDRAVALAQTLSAQLREAQDRINQLEREADGNFDNLLAEAKAAIQEVQFNADARVNRTIREADERIARLKAEAQNQIGRLQNELAQATRGID
Ga0105252_106078441	3300009678	Soil	MSEHSVPLGQEFGGGDSHEADPVVANLQQSANLANENCDRAVAVAQTLSAQLREAQDRINQLETEAEGLGDKLLAEAKAIIQEVRSNADARVNRIIREADERIDRLKAEAQNQIG
Ga0126379_119347911	3300010366	Tropical Forest Soil	MGCALGKAAAMSEHSVPLGQEFGSGDPDPADPVVANLQQSTNLANENCDRVLALAQTLSAQLRKAQNRINQLEREAEGLGDQLLAEAKAIIQGVRSNADARVNRTIREADERTDRLKADAQNQIGRLQNELAQATRGIDQVKNEASTRIESIKTEADARVDAV
Ga0151489_14954542	3300011106	Soil	MSEQSIASGQEFGSRDSDPADPVFANLQQSAKLANENCDRAVALNQTLSAQLREAQDRINQLEREAEGLGDRLLAEAKAIIQEVRSNADARVNRTIQEADERIDRL
Ga0137376_117629631	3300012208	Vadose Zone Soil	MSEQSIASGQEFGGRDSDPADPIVTNLQQSAKLANENCDRAVALNQTLSVQLREAQDRINQLERDADELGEQLLVEARAIIQEVQSNADARVKRTIREADERIDRL
Ga0137385_108122891	3300012359	Vadose Zone Soil	LQQSANLANEKCDRAVALAQTLSAQLREAQDRINQLEREAEGLGDQLLAEAKAIIQEVRSDADARVNRTIREADERIDRLKAEAQNQIGRLQNELAQATRGIDQVRDEAGTRIETIKMEADARVDAVETEAKKR
Ga0137413_106227092	3300012924	Vadose Zone Soil	MNEQSIASGQEFGSRDSDPADPVVANLQQSAKLANENCDRAVALNQTLSAQLREAQDRINQLEREADELGEQLLVEARAIIQDVQSNADATINRTIREADERIARLKAEAENQIGCLQNKLAQATRGTDQVKGEADKRIECVKMETDARVASVETDAKK
Ga0137416_104416501	3300012927	Vadose Zone Soil	MSEQSIASGRGFGSRDSDPADPIVANLQQSAKLANENCDRAVVLNQTLSAQLREAQDRINQLEREADELGEQLLVEARAIIQDVQSNADAT
Ga0164300_102507701	3300012951	Soil	MSEQSIASGQEFGSRDSDPADPAFVANLQQSAKLANENCDRAVALAHKLSAQLREAQDRINQLEREADGLCDQLLAEAKAVMQEVQSNADARVNRTTRETDERIGRLKAEAQNQIGRLQNELAQATRGIDSVKAEADKRIESVKMEADARVAAVETEAKNACSEWLEDTWKVSETMVFSK
Ga0164303_106959111	3300012957	Soil	MSFVLGKSAAMSEQSVASGQEFGTRDSDPADPAFDANLQQSANLANENCDRAVALNQTLSAQLREAQDRINQLEREADGLGDKLLEEAKAIIQEVQSNADGRVKRTIREADERIDRREAEAKNQISRLQNELAQATGEKPTRPSGA
Ga0164302_113980611	3300012961	Soil	MSFVLGKSAAMNEQSVASGQEFGSRDSDPADPAFVANLQQSANLANENCDRAVALAHKLSAQLREAQDRINQLEREADGLCDQLLAEAKAVMQEVQSNADA
Ga0164302_117475481	3300012961	Soil	MSEQSIASGQEFGGRDSDPADPIVANLQQSAKLANENCDRAVALNQTLSVQLREAQDRINQLEREADELGEQLLVEARAIIQDVQSNADATVKRAIREADERIA
Ga0164309_114323141	3300012984	Soil	MSEQSVPLGQEFGSRNSVPADPIVANLQQSANLANENCDRAVALAQTLSVQLREAQDRINQLEREADGLGDKLLAEAKAIIQEVQSRADARVNRTTREADERMHRLRAEAQNQIGRLQNELAQATQGIYQVKAKAGKR
Ga0164304_111752342	3300012986	Soil	MSEQSIASGQEFGGRDSDPADPIVANLQQSANLANENCDRAVALAQTLSAQLREAQDRINQLEREADGLGDKLLAEAKAIIQEVQSRADARVNRTTREADERMDRLKAEAQNQIGRLQNELA
Ga0164305_117416331	3300012989	Soil	MSEQSIASGQEFGSRDSDPADPIVANLQQSAKRANENCDRAVALNQTLSAQLREAQDRINQLEREADELGEQLLVEARAIIQDVQSNADATVKRAIREADERIALLKAG*
Ga0182041_104332562	3300016294	Soil	MSEHSVLLGQEFGSEDCDPADPVVANLQQSANLANENCDRVLALAQTLSAQLREAQDRINQLEREADGLGTQLFAEAKIIIEEVRSNADARVNRTIRQADERIDHVKADAQRQIDCLQDELAQATRAIDQVK
Ga0182041_117619231	3300016294	Soil	MSEQSVASGQEFGNRVPDPADPAFVANSQHSAELANENCDRAVALAHKLSVQLREAQDRINQLEREADGLCDQFLVEAKAVIREVQSNADVRVNRAIREGDERIARLRAEAQNQIGSLQRELAQATCGIDQVKAEADSRIEGIETEANARVAG
Ga0182041_118424891	3300016294	Soil	MSDHSVALGHEFGGGDSDRADPVVANFQQSANLANENCDRAVALAQTLSAQLREAQDRINQLESEAEGLGDQLFAEAKAIIQEVRFNADARVSRTIREADERI
Ga0182033_113384981	3300016319	Soil	MSEHSVPFRADPVVADLQQSANLANENCDRAVALAQILSAQLREAQDRINQLEHEAEGLGEQLLAEAKAIIQEVRSNADARVNRTIREADERMNGLKAEAQNEIGRLKNELAQATRGIDQVKDEAGTRIES
Ga0182033_117425061	3300016319	Soil	RTWKIGSMSEQSVASREEFGNRVPDPADPAFVANSQHSAELANENCDRAVALAHKLSVQLREAQDRINQLEREADGLCDQFLVEAKAVIREVQSNADVRVNRAIREGDERIARLRAEAQNQIGYLQRELAQATRGIDQVKAEADSRIERIEIETNARVAGMEAGAKNRIDLMRRENEEKVIRLEADLT
Ga0182032_103566551	3300016357	Soil	MSKQSAASGQEFGNRVPYPADPAFVANSQHSALAHKLSAELREAQERINQLEREADGLCDQFLAEAKAVIHEVQSNADARVNRTIREADERIARLRAEAHQIGRLQNELAQATSGINQVKAEADSRIERIEIEANARVAGVDADSS
Ga0182032_110650591	3300016357	Soil	ADPVVANLQQSANLANENCDRVLALAQTLSAHLREAQDWINQLEREAEGLGDQLLAEAKAMIEEVQSNADARVNRTIREADERIDRLKADARRLWL
Ga0182034_112698182	3300016371	Soil	MSEHSVLLGQEFGSEDCDPADPVVANLQQSANLANENCDRVLALAQTLSAQLREPQDRINQLEREAEGLGTQLLAEAKIIIEEVRSNADARVNRT
Ga0182040_118617421	3300016387	Soil	SGDSDPADPVVANLQQSANLANENCEQVVALAQMLSAQLREAQDRINQLEREAEGIGDQLLAEAKVIILEVRSNADARVNRTIREADERIDRLQAEAQSKISRLQNELARATREIDQVKDEAGTRIESVKMEADARVNAVEAEAKKRADVIRRQNEDKVLRLEDDLRAAKD
Ga0182037_107989632	3300016404	Soil	MSEQSVASGQEFGNRVPDPADPAFVANSQHSAELANENCDRAVTLAHKLSAELREAQDRINQLEREADGLCDQFLAEAKAVIHEVQSNADARVNRTIREADERIGRLRAEAQHQIGRLQNELAQATSGINQVKAEADSRIERIEIEANARVAGVEAEAKNRIDLVRREKEDKIIRLEVDLTTNAHQPLLGTVCAILRLREVCLETYDFFLVFSPHEI
Ga0182037_108371371	3300016404	Soil	MGSALGKTAAMSEHSVPLEQEFGSGDSDPADPVVANLQQSANLANENCDRVLALAQTLSAHLREAQDWINQLEREAEGLGDQLLAETKAIIEEVRSNADARVS
Ga0066667_112758141	3300018433	Grasslands Soil	MSEQSIASGQEFGRRDSDPADPIIANLQQAAKLANENCDRAVALNQTLSAQLRDAQDRINQLEREAHELSEQLLVEARAIIQEVQSNADGRVKRTIREADERIDRLEAEAKNQIS
Ga0066662_112813361	3300018468	Grasslands Soil	KLANENCDRALALNQTLSAQLREAQDRIKQLEREADELGEHLLVEARAIIQDVQSNADATVNRTTREADERIARLKAEAENQIRRLQSKLAQATGGTDQVQGEADKRIECAKMEMDARVASVETDAKKRIDVIRRETEDKVLRLEADLTQAKIARIMPSSG
Ga0210403_106318312	3300020580	Soil	MNEQSVASGQEFGSRDSDPADPAFVANLQQSANLANENCDRAVALAHKLSAQLREAQDRINQLEREADGLCDQLLAEAKAVMQEVQSNADARVNRTTRETDERIGRLKAEAQNQIGRLQNELAQATRGIDRV
Ga0210406_100650176	3300021168	Soil	MSEQSIDSGQEFGSRESDPADPIVANLQQSAKLANENCDRAVALNQTLSAQLREAQDRINHLEREADELGEQLLVEARAIIQDVQSNADATVNRTIREADERIAG
Ga0210406_112025131	3300021168	Soil	SRDSDPADPIVANLQQSAKLANENCDQAVELNQTLSAQLREAQDRINQLEREVDEVGEQLLVKARAIIQEVQSNADARVNQTIRETDERIDRLKAEAQNQISRLQNELA
Ga0210400_105918162	3300021170	Soil	MSEQSIASGQEFGSRDSDPADPIVANLQQSAKLANENCDRAVTLNQTLSVQLREAQDRINQLEREADELGEQLLVEARAIIQDVQSNADATVNRTIREADERIAG
Ga0210405_112819261	3300021171	Soil	FAFRGWRFELGKSASMSEQSIASEQEFGSRDSDPADPIVANLQQSAKLANENCDRAVALNQTLSAQLREAQDRINHLEREADELGEQLLVEARAIIQDVQSNADATVNRTIREADERIAG
Ga0210408_109302742	3300021178	Soil	MSEQSIASGQKFGSRDSDPADPVVANLQQSAKLANENCDRAVALNQTLSAQLREAQDRINQLEREAAELGEQLLIEARAIIQEVQSNADGRVKRTIREADERIDRREAEAKNQISRLQNELAQATGGTDLV
Ga0210393_103714161	3300021401	Soil	MIEQSIASGQEFGGRDSDPADPIVANLQQSAKLANENCDRAIALNQTLSAQLREAQDRINQLEREADGLGEQLLVEARAIIQDVQSKADATVKRALWEADERIARLKAEAENQIGRLQNELAQATRGTDRVKCEADKRIECVKMETDARVASVETDANKRIDIIRRENEDKILRLEADLMQAKNRADGAE
Ga0210393_114170711	3300021401	Soil	MSEQSIASGQKFGSRDSDPADPVVANLQQSAKLANENCDRAVALNQTLSAQLREAQDRINQLEREAAELGEQLLIEARAIIQEVQSNADGRVKRTIREADER
Ga0210389_114809762	3300021404	Soil	MSEQSIASGQEFGGRDSDPADPIVANLQQSAKLANENCDRAVALNQTLSAQLREAQDRINHLEREADELGEQLLVEARAIIQDVQSNADATVNRTIREADERIAG
Ga0210387_104282193	3300021405	Soil	MSEQSVHLGQEFGSRNSVPADPIVANLQQSANLANENCDRAVALAQTLSAQLREAQDRINQLEREADGLGDKLLAEAKAIIQEVQSRADARVNRTTREADERMDRLKAGAQNQIGRLQKELAQATQGIDQVKAEAGKGIESVKMEADARVYAVEAEAKKRVDIIRRENEDKILRLE
Ga0210387_105990631	3300021405	Soil	SEPSIASGQEFGGRDSDPADPIVANLQQSAKLANENCDRAVALNQTLSVQLREAQDRINQLEREADELGEQLLVEARAIIQDVQSNADATVNRTIREADERIAG
Ga0210387_113075411	3300021405	Soil	MSEQSIDSGQEFGSRESDPADPIVANLQQSAKLANENCDRAVALNQTLSAQLREAQDRINQLEREADELGEQLLVEARAIIQDVQSNADATINRTIREADERIARLKAEAENQIGCLQNKLAQATRGTDQVKG
Ga0210386_102530763	3300021406	Soil	MSEQSIASGQKFGSRDSDPADPVVANLQQSAKLANENCDRAVALNQTLSAQLREAQDRINQLEREAAELGEQLLIEARAIIQEVQSNADGRVKRTIREADERIDRREAEAKNQISRLQNELAQATGGTDLVKAEAGKQIESIKMEADARVDTVET
Ga0210410_105511892	3300021479	Soil	MSEQSVVSRQEFGSRNSVPADPIVANLQQSANLANENCDRAVALAQTLSAQLREAQDRINQLEREADGLGDKLFAEAKAIIQEVQSRADARVNRTAREADERMDRLKAEAQNQIGRLQNGLAQAAQGIDQVKAEAG
Ga0210409_113076281	3300021559	Soil	MSEQSVPLGQEFGSRNSVPADPIVANLQQSANLSNENCDRAVALAQTLSVQLREAQDRINQLEREADGLGDKLLAEAKAIIQEVQSRADARVNRTTREADERMDRLKAEAQNQIGRLQNGLAQ
Ga0207692_107521032	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSEQSIASGQEFGSRDSDPADPIVANLQQSAKLANENCDRAVALNQTLSAQLREAQDRINQLEREADELGEQLLVEARAIIQDVQSNADATVKRTIREADERIDRREAEAKNQISRLQNELAQATGGTDLVK
Ga0207664_112258042	3300025929	Agricultural Soil	MSEQSIASGQEFGSRDSDPADPIVANLQQSAKLANENCDRAVALAQTLSVQLREAQDRINQLEREADELGEQLLVEARAIIQDVQSNADATVKRAIREADERIARLKAEGENQIGRLQNELAQATRGT
Ga0207665_116688821	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	QQSAKRANENCDRAVALNQTLSAQLREAQDRINQLEREADELGEQLLVEARAIIQDVQSNADATVKRAIREADERIARLKAEGENQIGRLQNELAQATRGTDRVKGDADKRIECVKMETDARVASVETDAKKRIDIIRRENEDKILRLEADLTQAKNRADHAEQWVML
Ga0207948_10071541	3300027174	Forest Soil	MSEQSIASGQKFGSRDSDPADPVVANLQQSAKLANENCDRAVALNQTLSAQLREAQDRINQLEREADELGEQLLVEARAIIQDVQSNADATVNRTIREADERIARLKAEAENQIGRLQNELAQATRGTDRVKGDADKRIECVKMETDARVASVE
Ga0209625_11262471	3300027635	Forest Soil	MSEQSIASRQEFGSRDSDPADPVVANLQQSAKLANENCDRAVALAHKLSAQLREAQDRINQLEREADGLCDQFLAEAKAVIQEVQSNADGRVKRTIREADERIDRLEAEAKNQISRLQNELAQATGGTD
Ga0209117_10954703	3300027645	Forest Soil	MSEQSIASRQEFGSRDSDPADPIVANLQQSAKLANENCDRAVALNQTLSAQLREAQDRINQLEGEADELGEQLLVEARAIIQDVQSNADATVKRAIREADERNARLKAEAQNEIGHLQNELAQATRGIDQVKAEADKR
Ga0208991_10921742	3300027681	Forest Soil	MSEQSIASGQEFGSRDSDPADPIVANLQQSAKLANENCDRAVALNQTLSAQLREAQDRINQLEREADELGEQLLVEARAIIQDVQSNADATINRTIREADERIAR
Ga0209693_105604151	3300027855	Soil	MSEQSIASGQEFGGRDSDPADPIVANLQQSAKLANENCDRAIALNQTLSAQLREAQDRINQLEREADELGEQLLVEARAIIQDVQSNADATVNRTIREADERIAG
Ga0209488_102741371	3300027903	Vadose Zone Soil	MSEQSIASGQEFGSRDSDPADPIVANLQQSANLANENCDRAVALAQTLSAQLREAQDRINQLEREADGNFDNLLAEAKAAIQEVQFNADARVNRTIREADERIARLKAEAQNQIGRLQNELAQATRGIDQVKAEADKRIERVKMEADARVAGVDTSDDEGGRAFSCA
Ga0209526_101014281	3300028047	Forest Soil	MSEQSIASGQEFGSLDSDPADPAFVANLQQSANLANENCDRAVALAHKLSAQLQEAEDRINQLERERDGFFDQLLAEAKAAIQDVQSNADARLNRTIREADERIARLKAEAENQIGHLHNELAQATRGIDQIKAEADKRIECVEMETDARVAGVEAEAKKRIDLMQRENEHKVI
Ga0209526_107000661	3300028047	Forest Soil	SLQQSAKLANENCDRAVALNQTVSAQLREAQDRINQLEREADELGEQLLVEARAIIQDVQSNADATVNRTIREADERIARLKAEAENPIGRLQNDLAQATRGAEGPDPTQPFSLRC
Ga0209526_107190871	3300028047	Forest Soil	MSEQSIASGQEFGSRDSDPADPIVANLQQSAKLANENCDRAVALNQTLSAQLREAQDRINQLEREADELGDQLLVEARAIIQDVQSNADATINRTIREADERIARLKAEAEDQIGCLQNKLAQATRGTDQVKGEADKRIECVKMETDARVASVETDAKKRIDLMRRENEDKVLRLEADLTEAKNGADRA
Ga0307312_110854262	3300028828	Soil	MSEQSIASGQEFGSRDSDPADPIVANLQQSAKLANENCDRAVALNQTLSAQLREAQDRINQLEREADELGEQLLVEARAIIQEVQSNADGRVKRTIREADERIDRLGAEAK
Ga0308309_102688302	3300028906	Soil	MIEQSIASGQEFGGRDSDPADPIVANLQQSAKLANENCDRAIALNQTLSAQLREAQDRINQLEREADGLGEQLLVEARAIIQDVQSKADATVKRALWEADERIARLKAEAENQIGRLQNELAQATRGTDRVKCEADKRIECVKMETDARVASVETDANKRIDIIRRE
Ga0073994_122354841	3300030991	Soil	MSEQSVASGQEFGSRDSDPADPVVANLQQSAKLANENCDRAVTLNQTLSAQLREAQDRINQLEREADELGDQLLVEARAIIQDVQSNADATINRTIREADERIARLKAEAEDQIGCLQNKLAQATRGTDQVKGEADKRIERVKMEADARVAGVEIEAKKRIDLMRRENEDKVLRLEA
Ga0170824_1216829882	3300031231	Forest Soil	MSEQSIASGQKFGSRDSDPADPVVANLQQSAKLANENCDRAVALNQTLSAQLREAQDRINQLEREADELGEQLLVEARAIIQEAQSNADGRVKRTIREADERIDRLEAEAKNQISRLQNELAQATGGTDLVKAEA
Ga0170824_1265085511	3300031231	Forest Soil	MSEQSLPLGQEFGSRNSVPADPIVANLQQSANLANDNCDRAVALAQTLSAQLREAQDRINQLESEADGLGDKLLAEARAIIQEVQFRADARVNRTTREADERMDRLKAGAQNQIGRLQKELAQATQGIDQVKAEAGKGIESVKME
Ga0170820_110181532	3300031446	Forest Soil	MSEQSIASGQKFGSRDSDPADPVVANLQQSAKLANENCDRAVALNQTLSAQLREAQDRINQLEREAAELGEQLLIEARAIIQEVQSNADGRVKRTIREADERIDRLEAEAKNQISRLQNELAQATGGTDLVKAEA
Ga0170820_128955291	3300031446	Forest Soil	MSDRQLVPFGPDGIDTVDPDLVATLQQSANVANGNCDRAIALAHKLAGQLREAQDRINQLEQEADGLFDRSMEEANAAVEKVQSNADARVHRTIQEADERIARLEAAARNQIGRLQNELAHAARG
Ga0170818_1065595292	3300031474	Forest Soil	MSEQSLPLGQEFGSRNSVPADPIVANLQQSANLANDNCDRAVALAQTLSAQLREAQDRINQLESEADGLGDKLLAEARAIIQEVQFRADARVNRTTREADERMDRLKAGAQNQIGRLQ
Ga0318528_104518841	3300031561	Soil	MSEQSVASGQEFGNRVPDPADPAFVANSQHSAELANENCDRAVALAHKLSVQLREAQDRINQLEREADGLCDQFLVEAKAVIREVQSNADVRVNRAIREGDERIARLRAEAQNQIGSL
Ga0310915_100122761	3300031573	Soil	MSEHSVPLEHGFGSGDSDPADPVVANLQQSANLANENCEQVVALAQMLSAQLREAQDRINQLEREAEGIGDQLLAEAKVIILEVRSNADARVNRTIREADERVDRLKAEAQNKISRLQNELAQATRVIDQVKDEAGTRIER
Ga0318542_107289762	3300031668	Soil	MSGHSVRLRHGIGSGDSDPADPVVANLQQSANLANENCEQVVALAQMLSAQLREAQDRINQLEREAEGIGDQLLAEAKVIILEVRSNADARVNRTIREADERVDRLKAEAQNKISRLQNE
Ga0306917_106084072	3300031719	Soil	MSEQPVVLGQDLGSWVPDPANPAFVANSQHSADLANENCDRAVTLAHKLSAELREAQDRINQLEREADGLCDQFLAEAKAVIHEVQSNADARVNRTIREADERIGRLRAEAQHQIGRLQNELAQATSGINQVKAEADSRIER
Ga0306918_100738153	3300031744	Soil	LPLIYLFVLGKTAAMSEHSVPLEHGFGSGDSDPADPVVANLQQSANLANENCEQVVALAQMLSAQLREAQDRINQLEREAEGIGDQLLAEAKVIIVEVRSNADARVNR
Ga0306918_102104221	3300031744	Soil	MSEHSVLLGQEFGSEDCDPADPVVANLQQSANLANENCDRVLALAQTLSAQLREAQDRINQLEREAEGLGTQLLAEAKIIIEEVRSNADARVNRTIRQADERIDHVKADAQRQIDCLQDELAQATRAIDQVKYEAGARIESVKKAADARVDAVETEAKKRVDVIR
Ga0318521_110351351	3300031770	Soil	LFVLGKTAAMSEHSVPLEHGFGSGDSDPADPVVANLQQSANLANENCEQVVALAQMLSAQLREAQDRINQLEREAEGIGDQLLAEAKVIILEVRSNADARVNRTIREADERVDRLKAEAQNKISRLQNELAQATRVIDQVKDEAGTRIESVKMEADARVNAVQTEAK
Ga0318546_105552013	3300031771	Soil	MNEHSVRLGHGFGSGDSDPADPVVANLQQSANLANENCEQVVALAQMLSAQLREAQDRINQLEREAEGIGDQLLAEAKVIILEVRSNADARVNRTIREADERVDRLKAEAQNK
Ga0306919_102272062	3300031879	Soil	LPLIYLFVLGKTAAMSEHSVPLEHGFGSGDSDPADPVVANLQQSANLANENCEQVVALAQMLSAQLREAQDRINQLEREAEGIGDQLLAEAKVIILEVRSNADARVNRTIREADERVDRLKAEAQ
Ga0306925_120135531	3300031890	Soil	YPADPAFVANSQHSALAHKLSAELREAQERINQLEREADGLCDQFLAEAKSVIHEVQSNADARVNRTIREADERIARLRAEAHQIGRLQNELAQATSGINQVKAEADSRIERIEIEANARVAGVDADSS
Ga0306923_106809432	3300031910	Soil	MSEHSVPLEQEFGSGDSDPADPVVANLQQSANLANENCDRVLALAQTLSAHLREAQDWINQLEREAEGLGDQLLAEAKAMIEEVQSNADARVNRTIREADERIDRLKADARRLWL
Ga0306923_110154181	3300031910	Soil	MSEQSVASGQEFGNRVPDPADPAFVANSQHSAELANENCDRAVALAHKLSVQLREAQDRINQLEREADGLCDQFLVEAKAVIREVQSNADVRVNRAIREGDERIARLRAEAQNQIGSLQRELAQATCGIDQVKAEADSRIEGIETEANARVAGMEAEAKKRIDLVQREKEDKVIRLEADLTEAKNRADRAEEW
Ga0310912_103521231	3300031941	Soil	MSEQSVASGQEFGNRVPDPADPAFVANSQHSAELANENCDRAVALAHKLSVQLREAQDRINQLEREADGLCDQFLVEAKAVIREVQSNADVRVNRAIREGDERIARLRAEAQNQIGS
Ga0310912_113806431	3300031941	Soil	MSEQPVVLGQELGSWVPDPANPAFVANSQHSADLANENCDRAVTLAHKLSAELREAQDRINQLEREADGLCDQFLAEAKAVIHEVQSNADARVNRTIREADERIGRLRAEAQHQIGRLQNELAQATSGINQVKAEADSRIERIEIEANARVAG
Ga0310916_105294122	3300031942	Soil	MSEQPVVLGQDLGSWVPDPANPAFVANSQHSADLANENCDRAVTLAHKLSAELREAQDRINQLEREADGLCDQFLAEAKAVIHEVQSNADARVNRTIREADERIGRLRAEAQHQIGRLQNELAQATSGINQVKAEADSRIERIEIEANARVAGVEAEAKNRIDLVRRENEEKVIRL
Ga0310910_106358953	3300031946	Soil	MNEHSVRLGHGFGSGDSDPADPVVANLQQSANLANENCEQVVALAQMLSAQLREAQDRINQLEREAEGLGDQLLAEAKAIVLEVRSNADARVNRTIREADERIDRLKAEAQSRI
Ga0310909_106141353	3300031947	Soil	MSGHSVRLRHGIGSGDSDPADPVVANLQQSANLANENCEQVVALAQMLSAQLREAQDRINQLEREAEGIGDQLLAEAKVIILEVRSNADARVNRTIRE
Ga0306926_108262481	3300031954	Soil	MSEQPVVLGQDLGSWVPDPANPAFVANSQHSADLANENCDRAVTLAHKLSAELREAQDRINQLEREADGLCDQFLAEAKAVIHEVQSNADARVNRTIREADERIARLRAEAQNRIGSLQRELAQGTRGIDQVKAEADSRIERIEIEANARVAGV
Ga0306922_122274431	3300032001	Soil	MSEQSVASGQEFGNRVPYPADPAFVANSQHSALAHKLSAELREAQDRINQLEREADGLCDQFLAEAKAVIHEVQSNADARVNRTIREADERIARLRAEAHQIGRLQNELAQATSGINQVKAEADSRIE
Ga0318575_106003742	3300032055	Soil	MNEHSVRLGHGFGSGDSDPADPVVANLQQSANLANENCEQVVALAQMLSAQLREAQDRINQLEREAEGIGDQLLAEAKVIILEVRSNADARVNRTIREADERIDRLQAEAQSKISRLQNELARATREIDQVKDE
Ga0307471_1026713701	3300032180	Hardwood Forest Soil	MSEQSAASAQEFGGQHCDPADPAFVANLQQSANLANENCDRAVALAHELSADLREARERINQLEREADSFFDQLSKAKAANQDVQSNADTRVTGTIREAEERIARLKTEAENQIGRLQNELAQATRETDQVKAEADKR
Ga0306920_1018991651	3300032261	Soil	MSERSVPLAQEFGSGDSDPADPVVANLQQSTNLANENCDRVLALAQTLSAQLREAQDRINQLEREAEGLGDQLLAEAKAIIEEVRSNADARVNRTNREADECIDRLKADAQNQIARLQSEVAQATRGIDQVKDEAAKRIESVKIEADARVDVVETEAKKRIDVIRSENEDKVFRLETDLTEAKDRAD
Ga0310914_113213211	3300033289	Soil	MSEHSVLLGQEFGSEDCDPADPVVANLQQSANLANENCDRVLALAQTLSAQLREAQDRINQLEREAEGLGDQLLAEAKAIIEEVRSNADARVNQTIREADDRIDRLKADAQNQIVRLQNELAQATRGIDRVKDEAATRIESVKMEADARVDAVETEAKKRVDVIRRENED
Ga0364937_011247_1026_1364	3300034113	Sediment	MSEHSVPLGQEFGGGDSHEADPVVANLQQSANLANENCDRAVAVAQTLSAQLREAQDRINQLETEAEGLGDKLLAEAKAIIQEVRSNADARVNRTIREANERIDRLKAEAQNQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097986

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences