Metagenome Family F098011

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098011
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	74 residues
Representative Sequence	MTDDEFVVIYVDRKHGNAYYDRYRNNWIRCAVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE
Number of Associated Samples	60
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	29.81 %
% of genes near scaffold ends (potentially truncated)	24.04 %
% of genes from short scaffolds (< 2000 bps)	78.85 %
Associated GOLD sequencing projects	53
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (62.500 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (23.077 % of family members)
Environment Ontology (ENVO)	Unclassified (28.846 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.885 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 56.00% Coil/Unstructured: 44.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF13302	Acetyltransf_3	4.81
PF03596	Cad	1.92
PF00072	Response_reg	1.92
PF00932	LTD	1.92
PF14947	HTH_45	1.92
PF13847	Methyltransf_31	1.92
PF01261	AP_endonuc_2	1.92
PF12681	Glyoxalase_2	1.92
PF11213	DUF3006	1.92
PF00561	Abhydrolase_1	1.92
PF07883	Cupin_2	0.96
PF00291	PALP	0.96
PF07690	MFS_1	0.96
PF08734	GYD	0.96
PF00581	Rhodanese	0.96
PF14417	MEDS	0.96
PF00127	Copper-bind	0.96
PF03073	TspO_MBR	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG4300	Cadmium resistance protein CadD, predicted permease	Inorganic ion transport and metabolism [P]	1.92
COG3476	Tryptophan-rich sensory protein TspO/CrtK (mitochondrial benzodiazepine receptor homolog)	Signal transduction mechanisms [T]	0.96
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.35 %
Unclassified	root	N/A	33.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.42 %
Unclassified	root	N/A	33.65 %
Viruses	superkingdom	All Organisms → Viruses	1.92 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	62.50 %
Unclassified	root	N/A	33.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.65 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	22.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.65 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	22.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.65 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	22.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.65 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	22.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.65 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	22.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.65 %
Nitrososphaera	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	12.50 %
unclassified Nitrososphaeraceae	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae	6.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.65 %
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	6.73 %
Candidatus Nitrososphaera evergladensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	3.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.92 %
unclassified Nitrososphaera	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.65 %
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	6.73 %
Candidatus Nitrososphaera evergladensis SR1	isolate	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis → Candidatus Nitrososphaera evergladensis SR1	1.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.92 %
Nitrososphaera sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp.	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0481462	All Organisms → cellular organisms → Archaea	642	Open in IMG/M
3300000787\|JGI11643J11755_11767387	All Organisms → cellular organisms → Archaea	2102	Open in IMG/M
3300000787\|JGI11643J11755_11780238	All Organisms → cellular organisms → Archaea	774	Open in IMG/M
3300000858\|JGI10213J12805_10084559	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1211	Open in IMG/M
3300000858\|JGI10213J12805_11703229	All Organisms → cellular organisms → Archaea	623	Open in IMG/M
3300000953\|JGI11615J12901_10046789	Not Available	584	Open in IMG/M
3300003267\|soilL1_10098997	All Organisms → cellular organisms → Archaea	2584	Open in IMG/M
3300003324\|soilH2_10134504	Not Available	1468	Open in IMG/M
3300003373\|JGI25407J50210_10011790	All Organisms → cellular organisms → Bacteria	2237	Open in IMG/M
3300003373\|JGI25407J50210_10034465	All Organisms → cellular organisms → Archaea	1305	Open in IMG/M
3300003373\|JGI25407J50210_10113221	Not Available	669	Open in IMG/M
3300004463\|Ga0063356_100417039	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	1735	Open in IMG/M
3300004463\|Ga0063356_103215636	Not Available	704	Open in IMG/M
3300005562\|Ga0058697_10063835	Not Available	1445	Open in IMG/M
3300005562\|Ga0058697_10682799	Not Available	545	Open in IMG/M
3300005981\|Ga0081538_10004263	All Organisms → cellular organisms → Archaea	13251	Open in IMG/M
3300005981\|Ga0081538_10012844	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	6685	Open in IMG/M
3300005981\|Ga0081538_10082702	All Organisms → cellular organisms → Archaea	1701	Open in IMG/M
3300006049\|Ga0075417_10117788	All Organisms → cellular organisms → Archaea	1217	Open in IMG/M
3300006169\|Ga0082029_1046987	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300006169\|Ga0082029_1265015	Not Available	531	Open in IMG/M
3300006169\|Ga0082029_1658150	All Organisms → cellular organisms → Archaea	935	Open in IMG/M
3300006169\|Ga0082029_1728379	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	3837	Open in IMG/M
3300006844\|Ga0075428_100099644	All Organisms → cellular organisms → Archaea	3168	Open in IMG/M
3300006876\|Ga0079217_10082868	All Organisms → cellular organisms → Archaea	1393	Open in IMG/M
3300006876\|Ga0079217_10262987	Not Available	930	Open in IMG/M
3300006876\|Ga0079217_11312845	Not Available	559	Open in IMG/M
3300006880\|Ga0075429_101862267	Not Available	521	Open in IMG/M
3300006894\|Ga0079215_10058000	All Organisms → cellular organisms → Archaea	1536	Open in IMG/M
3300006894\|Ga0079215_10480146	All Organisms → cellular organisms → Archaea	767	Open in IMG/M
3300006894\|Ga0079215_11045561	All Organisms → cellular organisms → Archaea	605	Open in IMG/M
3300006918\|Ga0079216_10015496	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	2729	Open in IMG/M
3300006918\|Ga0079216_10282569	Not Available	970	Open in IMG/M
3300006918\|Ga0079216_11567699	Not Available	555	Open in IMG/M
3300007004\|Ga0079218_10343215	All Organisms → cellular organisms → Archaea	1239	Open in IMG/M
3300007004\|Ga0079218_10521799	All Organisms → Viruses → Predicted Viral	1058	Open in IMG/M
3300007790\|Ga0105679_10155465	All Organisms → Viruses → Predicted Viral	1175	Open in IMG/M
3300007790\|Ga0105679_10361578	All Organisms → cellular organisms → Archaea	1298	Open in IMG/M
3300007790\|Ga0105679_10428834	Not Available	1176	Open in IMG/M
3300007790\|Ga0105679_10588839	All Organisms → cellular organisms → Archaea	1914	Open in IMG/M
3300009146\|Ga0105091_10751822	Not Available	515	Open in IMG/M
3300009789\|Ga0126307_10247635	All Organisms → cellular organisms → Archaea	1432	Open in IMG/M
3300009789\|Ga0126307_10783837	All Organisms → cellular organisms → Archaea	769	Open in IMG/M
3300009789\|Ga0126307_11254649	All Organisms → cellular organisms → Archaea	600	Open in IMG/M
3300009840\|Ga0126313_10407731	All Organisms → cellular organisms → Archaea	1079	Open in IMG/M
3300009840\|Ga0126313_11858756	Not Available	504	Open in IMG/M
3300010036\|Ga0126305_10741731	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	665	Open in IMG/M
3300010037\|Ga0126304_10247876	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1172	Open in IMG/M
3300010038\|Ga0126315_10030379	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis → Candidatus Nitrososphaera evergladensis SR1	2807	Open in IMG/M
3300010038\|Ga0126315_10124429	All Organisms → cellular organisms → Archaea	1505	Open in IMG/M
3300010039\|Ga0126309_10312555	Not Available	912	Open in IMG/M
3300010039\|Ga0126309_10595128	All Organisms → cellular organisms → Archaea	695	Open in IMG/M
3300010040\|Ga0126308_10071995	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis → Candidatus Nitrososphaera evergladensis SR1	2061	Open in IMG/M
3300010041\|Ga0126312_10302329	All Organisms → cellular organisms → Archaea	1129	Open in IMG/M
3300010041\|Ga0126312_10821039	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	675	Open in IMG/M
3300010042\|Ga0126314_11163652	Not Available	576	Open in IMG/M
3300010044\|Ga0126310_10465452	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	916	Open in IMG/M
3300010045\|Ga0126311_10220696	All Organisms → cellular organisms → Archaea	1393	Open in IMG/M
3300010045\|Ga0126311_11454784	Not Available	573	Open in IMG/M
3300010047\|Ga0126382_10600969	Not Available	905	Open in IMG/M
3300010166\|Ga0126306_10021079	Not Available	4305	Open in IMG/M
3300010166\|Ga0126306_10060960	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	2639	Open in IMG/M
3300010166\|Ga0126306_10067752	All Organisms → cellular organisms → Archaea	2514	Open in IMG/M
3300010166\|Ga0126306_10356308	Not Available	1137	Open in IMG/M
3300010166\|Ga0126306_10455401	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	1007	Open in IMG/M
3300010166\|Ga0126306_11279637	All Organisms → cellular organisms → Archaea	604	Open in IMG/M
3300014487\|Ga0182000_10026193	All Organisms → cellular organisms → Archaea	1588	Open in IMG/M
3300014488\|Ga0182001_10047896	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	1141	Open in IMG/M
3300014488\|Ga0182001_10616852	Not Available	524	Open in IMG/M
3300018432\|Ga0190275_10090663	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	2682	Open in IMG/M
3300018432\|Ga0190275_10151720	All Organisms → cellular organisms → Archaea	2136	Open in IMG/M
3300018466\|Ga0190268_12094792	Not Available	524	Open in IMG/M
3300019132\|Ga0193604_1030490	All Organisms → cellular organisms → Archaea	808	Open in IMG/M
3300019767\|Ga0190267_10270123	All Organisms → cellular organisms → Archaea	857	Open in IMG/M
3300021184\|Ga0196959_10069393	All Organisms → cellular organisms → Archaea	764	Open in IMG/M
3300027639\|Ga0209387_1155163	All Organisms → cellular organisms → Archaea	602	Open in IMG/M
3300027873\|Ga0209814_10375547	Not Available	623	Open in IMG/M
3300027886\|Ga0209486_10031693	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	2551	Open in IMG/M
3300027909\|Ga0209382_11221128	Not Available	767	Open in IMG/M
3300030513\|Ga0268242_1020534	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	1111	Open in IMG/M
3300030619\|Ga0268386_10950303	Not Available	534	Open in IMG/M
3300031228\|Ga0299914_10018795	All Organisms → cellular organisms → Archaea	5549	Open in IMG/M
3300031229\|Ga0299913_11137875	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	742	Open in IMG/M
3300031548\|Ga0307408_100010312	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	6163	Open in IMG/M
3300031731\|Ga0307405_11033643	Not Available	703	Open in IMG/M
3300031731\|Ga0307405_11198320	Not Available	657	Open in IMG/M
3300031824\|Ga0307413_10067676	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	2234	Open in IMG/M
3300031852\|Ga0307410_10027821	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	3577	Open in IMG/M
3300031852\|Ga0307410_10475244	All Organisms → cellular organisms → Archaea	1024	Open in IMG/M
3300031901\|Ga0307406_10122800	All Organisms → cellular organisms → Archaea	1809	Open in IMG/M
3300031901\|Ga0307406_11370152	Not Available	619	Open in IMG/M
3300031911\|Ga0307412_10881157	All Organisms → cellular organisms → Archaea	783	Open in IMG/M
3300031911\|Ga0307412_11503111	Not Available	612	Open in IMG/M
3300031995\|Ga0307409_100055391	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	3061	Open in IMG/M
3300031995\|Ga0307409_101120676	All Organisms → cellular organisms → Archaea	808	Open in IMG/M
3300031995\|Ga0307409_102407393	Not Available	555	Open in IMG/M
3300032002\|Ga0307416_101000295	All Organisms → cellular organisms → Archaea	939	Open in IMG/M
3300032004\|Ga0307414_10804747	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp.	857	Open in IMG/M
3300032004\|Ga0307414_10903212	Not Available	810	Open in IMG/M
3300032004\|Ga0307414_11441999	All Organisms → cellular organisms → Archaea	640	Open in IMG/M
3300032126\|Ga0307415_102361872	Not Available	522	Open in IMG/M
3300032159\|Ga0268251_10091430	Not Available	1071	Open in IMG/M
3300034174\|Ga0334932_002868	All Organisms → cellular organisms → Archaea	2740	Open in IMG/M
3300034174\|Ga0334932_031686	Not Available	895	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.31%
Host-Associated	Host-Associated	32.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.35%
Plants	Host-Associated → Plants	32.69%
Aquatic	Environmental → Aquatic	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.12%
Roots	Host-Associated → Plants → Roots	5.77%
Phylloplane	Host-Associated → Plants → Phylloplane	2.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.92%
Freshwater	Environmental → Aquatic → Freshwater	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.12%
Sand	Environmental → Terrestrial → Soil → Sand	5.77%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	5.77%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	2.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.12%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	14.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.77%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	5.77%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	5.77%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	2.88%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	1.92%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	23.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	17.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	12.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.77%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.81%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	4.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.85%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	3.85%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	2.88%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.92%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.92%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019132	Soil crust microbial communities from Colorado Plateau, Utah, USA - early-mid stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300030513	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG (v2)	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034174	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 28HNS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_04814622	2228664021	Soil	MPDDEFVVIYVDRKHANAYYDRYRNNWIHCAVNHEEGRALHLDKRSGALVCYGYGHENNYIKGRRYNIVEIDVDE
JGI11643J11755_117673873	3300000787	Soil	MSDVEFVVIYVDRKHGNAYYDRYRNNWIHCAVNHEEGRALHLDKRSGALVCYGYGHENNYIKGRRYNIVEIDVDE*
JGI11643J11755_117802382	3300000787	Soil	MPDDEFVVIYVDRKHANAYYDRYRNNWIRCAVNHEEGRALHLDKRSGALVCYGYGHENNFIRGRRYKIVEIDVDE*
JGI10213J12805_100845593	3300000858	Soil	MEDDELLIIFVDRKHANAYYDRYRNSWIRCTIEHEVGRALHLDKKSGALVCYGYGHENNYVRGRKYKIVEIDV
JGI10213J12805_117032293	3300000858	Soil	MTDEFVVIYVDRKYGNAYYDRYRNNWIGCAVEEHERGRALHLDKKSGALVCYGYGHENNYIRGRKY
JGI11615J12901_100467892	3300000953	Soil	MYDNNHEMTDEFVVVYVDRRYGNAYHDRYRNNWIRCAIEHEEGGALHVDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE*
soilL1_100989972	3300003267	Sugarcane Root And Bulk Soil	MTEDDFMVIYIDRIHGNAYYDRYRNNWVECTIEHEEGRALHLDKKSGVLVCYGYGHENNDYIRGRRYKIVEIDVDE*
soilH2_101345041	3300003324	Sugarcane Root And Bulk Soil	RTWFSMISIMTEDEFMVIYIDRIHGNAYYDRYRNNWVECTIEHEEGRALHLDKKSGVLVCYGYGHENNDYIRGRRYKIVEIDVDE*
JGI25407J50210_100117904	3300003373	Tabebuia Heterophylla Rhizosphere	MTDEFVVIYVDRKYGNAYYDRYRNNWIGCAVEEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYRILEIDVDE*
JGI25407J50210_100344652	3300003373	Tabebuia Heterophylla Rhizosphere	MTDEFVVIYVDRKYGNAYYDRYRNNXIPCAVKHEXGRALHLDXKSGALVCYGYGHENNYIRGRRYKIVEIDVXE*
JGI25407J50210_101132211	3300003373	Tabebuia Heterophylla Rhizosphere	MTDEFVVIYVDRKYGNAYYDRYRNNWIGCAVEEHERGRALHLDKKSGALVCYGYGHENNYIRGRKYKIVEIDVDE*
Ga0063356_1004170391	3300004463	Arabidopsis Thaliana Rhizosphere	MRDDEFVVIYVDRKHGNAYYDRYRNNWIMCDVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE*
Ga0063356_1032156363	3300004463	Arabidopsis Thaliana Rhizosphere	YVDRKHGNAYYDRYRNNWIRCAVNHEEGRALHLDKRSGALVCYGYGHENNFIRGRRYKIVEIDVDE*
Ga0058697_100638352	3300005562	Agave	MTDKEFLVIYVDRKYGNAYYDRYRNNWIRCEVEEHEEGKALHIDKKTGALVCYGYRHENNYIRGRRYKIVEIDVDE*
Ga0058697_106827991	3300005562	Agave	VIYVDRKHGNAYYDRYRDNWIRCAVEHEEGRALHLDKKSGALVCYGYEHENNYISGRNYRILEIDVDE*
Ga0081538_100042634	3300005981	Tabebuia Heterophylla Rhizosphere	MTDEELVVIFVDRKHANAYYDRYRNNWIRCAVEHEEGRALHLDKKSGTLVCYGYGHENNYIRGRKYKIVEIDVDE*
Ga0081538_100128447	3300005981	Tabebuia Heterophylla Rhizosphere	MTDEFVVIYVDRKYGNAYYDRYRNNWIPCAVKHEGGRALHLDRKSGALVCYGYGHENNYIRGRRYKIVEIDVDE*
Ga0081538_100827022	3300005981	Tabebuia Heterophylla Rhizosphere	MTDEFVVIYVDRKYGNAYYDRYRNNLIPCAVKHERGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE*
Ga0075417_101177882	3300006049	Populus Rhizosphere	MRDDEFVVIYVDRKHGNAYYDRYRNNWIMCDVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRKYKIVEIDVDE*
Ga0082029_10469873	3300006169	Termite Nest	MTDDEFVVIYVDRKYGNAYYDRYRNNWIECEVGEHHEEGRALHVDKKSGALVCYGYGHENYYIKGRRYRIVEVDVDE*
Ga0082029_12650151	3300006169	Termite Nest	VVVYVDRKHGNAYYDRYRNNWIECAVEQHEEGRALHLDKKSGALVCYGYGHENNYIRGRKYKIVEIDVDE*
Ga0082029_16581502	3300006169	Termite Nest	MTEDEFVVVYVDRKHGNAYYDRYRNNWIECAVEHEEGRALHLDKKSGALVCYGFGHENNYIRGRRYKIVEIDVDE*
Ga0082029_17283794	3300006169	Termite Nest	MLSKEMTDEELVVIFVDRKHANAYYDRYRNNWIRCAVEHEEGRALHLDKKSGTLVCYGYGHENNYIRGRKYKIVEIDVDE*
Ga0075428_1000996447	3300006844	Populus Rhizosphere	MTDEELVVIFVDRMHANAYCDRYRNNWIRCAVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRKYKIVEIDVDE*
Ga0079217_100828681	3300006876	Agricultural Soil	HGNAYYDRYRNNWIMCAVEHEEGRALHLDKKSRALVCYGYGHENNYIRGRRYKIVEIDVDE*
Ga0079217_102629872	3300006876	Agricultural Soil	MIDDEFVVIYVDRKHGNAYYDRYRNNWIKCAVEHEEGRALHLDKKSGALVCYGYGHENNYIGGRTYRIVEIDVDD*
Ga0079217_113128452	3300006876	Agricultural Soil	MTDDEFLVIYIDRKYGNAYYDRYRNNWIPCSVEHHEEGRALHVDKMSGALVCYGYGHENNHIRGQKYRIVEIDVDE*
Ga0075429_1018622671	3300006880	Populus Rhizosphere	MRDDEFVVIYVDRKHGNAYYDRYRNNWIMCDVEHEEGRALHLDKKSGALVCYGYGHENNYIRGR
Ga0079215_100580004	3300006894	Agricultural Soil	MRDDEFVVIYVDRMHGNAYYDRYRNNWIMCAVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE*
Ga0079215_104801462	3300006894	Agricultural Soil	MTDDEFLVIYIDRKYGNAYYDRYRNNWIECTVGEHHEEGRALHLDKKSGALVCYGYGHENNYVRGRRYKIVEIDVDE*
Ga0079215_110455611	3300006894	Agricultural Soil	MSDEFAVIYVDRKYGNAYYDRYRNNWICCEVEHEEGKALHLDKKSGALICYGYGHENNYIRGRRYKIVEIDVDE*
Ga0079216_100154963	3300006918	Agricultural Soil	MRDDEFVVIYVDRKHGNAYYDRYRNNWIMCAVEHEEGRALHLDKKSGALVCYGHGHENNYIRGRRYKIVEIDVDE*
Ga0079216_102825691	3300006918	Agricultural Soil	MTDDEFLVIYIDRKYGNAYYDRYRNNWIPCSVEHHEEGRALHMDKMSGALVCYGYGHENNHIRGQKYRIVEIDVDE*
Ga0079216_115676991	3300006918	Agricultural Soil	MTDDEFVLIYVDRKHGNAYYDRYRNSWIRCAVEHEEGRALHLDRKSGALVCYGYGHENNYIGGRNYRIVEIDVDE*
Ga0079218_103432151	3300007004	Agricultural Soil	MRDDEFVVIYVDRKHGNAYYDRYRNNWIMCAVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE*
Ga0079218_105217992	3300007004	Agricultural Soil	MTDEIVVIYIDRKYGNAYYDRYRSNWIPCAVEHEEGRALHVDKKSGALVCYGYEHENNYIKGRRYRIVEIDVDE*
Ga0105679_101554651	3300007790	Soil	MIDDKFLVIYVDRKHGNAYYDRYRNNWVLCSVEHHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE*
Ga0105679_103615782	3300007790	Soil	MTADDEFLVIYVDRKYGNAYYDRYRNNWIPCSIEHHEEGRALHVDKMSGALVCYGYGHENNHIRGRRYRIVEIDVDEWGKKGKKRR*
Ga0105679_104288341	3300007790	Soil	IYVDRKYGNAYYDRYRNNWIRCVKEHEEGRALHVDKKSGALVCYGYGHENNYIMGKRYKIAEIDVDE*
Ga0105679_105888392	3300007790	Soil	MTDEFVVIYVDRKYGNAYYDRYRNNWIPCAVKHERGRALHLDKKSGALVCYGYGHENNYIRGRRYRILEIDVDE*
Ga0105091_107518222	3300009146	Freshwater Sediment	GNAYYDRYRNNWIMCDVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE
Ga0126307_102476351	3300009789	Serpentine Soil	MTDDEFVVIYVDRKHGNAYYDRYRNIWIRCSVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE*
Ga0126307_107838371	3300009789	Serpentine Soil	MIDEILVIYVDRKHGNAYYDRYRNNWIRCAVEHEEGRALHLDKMSGALVCYGYGHENNYIRGRRYKIVEIDVDE*
Ga0126307_112546491	3300009789	Serpentine Soil	MPDVEFVVVYVDRKHTNAYYDRYRNNWIRCAVNHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE*
Ga0126313_104077312	3300009840	Serpentine Soil	VDRKYGNAYYDRYRNNWIGCAIEHEEGRALHLDKKSGALVCYGYGHENNYIRGRKYRILEIDVDE*
Ga0126313_118587561	3300009840	Serpentine Soil	MTDDEFVVIYVDRKHGNAYYDRYRNNWIRCAVVHEEGRALHLDRKSGALVCYGYGHENNYIRGRRYKIVEIDVDE*
Ga0126305_107417311	3300010036	Serpentine Soil	TDDEFVVIYVDRKHGNAYYDRYRNIWIRCSVEHEEGRALHLDKKSGALVCYGHGHENNYIRGRRYKIVEIDVDE*
Ga0126304_102478764	3300010037	Serpentine Soil	DDEFVVIYVDRKHGNAYYDRYRNIWIRCSVEHEEGRALHLDKKSGALVCYGHGHENNYIRGRRYKIVEIDVDE*
Ga0126315_100303794	3300010038	Serpentine Soil	MIDIEGVVVIYVDRKHGNAYYDRYRNNWIGCAVEYEEGRALHLDKNSGALVCYGYGHENNYIRGRKYRILEIDVDE*
Ga0126315_101244292	3300010038	Serpentine Soil	MTDEEFVVIYVDRKHGNAYHDRYRNNWIRCAVEHEEGRALHLDRKSGALVCYGYGHENNYIRGRRYKIVEIDVDE*
Ga0126309_103125551	3300010039	Serpentine Soil	MTADDFMVIYVDRKHGNAYYDRYRNNWIPCSVEEHEEGRALHLDKKSGALVCYGYGHENNYIRGQRYKIVEIDVDE*
Ga0126309_105951281	3300010039	Serpentine Soil	MTDEIVVIYVDRKHGNAYYDRYRNNWIRCAVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE*
Ga0126308_100719952	3300010040	Serpentine Soil	MIDIEGVVVIYVDRKHGNAYYDRYRNNWIGCAVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRKYRILEIDVDE*
Ga0126312_103023291	3300010041	Serpentine Soil	MTDDEFMVIYVDRKHGNAYYDRYRNNWIECAVEHHEEGRALHLDRKSGALVCYGYGHENNYIRGRKYKIVEIDVDE*
Ga0126312_108210392	3300010041	Serpentine Soil	DDEFVVIYVDRKHGNAYYDRYRNIWIRCSVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE*
Ga0126314_111636522	3300010042	Serpentine Soil	MTDDEFVVIYVDRKHGNAYYDRYRNNWIRCAVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE*
Ga0126310_104654521	3300010044	Serpentine Soil	MTDDEFVVIYVDRKHGNAYYDRYRNIWIWCSVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE*
Ga0126311_102206962	3300010045	Serpentine Soil	MIDIEGVVVIYVDRKHGNAYYDRYRNNWIGCAVEHEEGRALHLDKNSGALVCYGYGHENNYIRGRKYRILEIDVDE*
Ga0126311_114547841	3300010045	Serpentine Soil	MYDNNHEMTDEFVVVYVDRRYGNAYYDRYRNNWIRCAIEHEEGGALHVDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE*
Ga0126382_106009691	3300010047	Tropical Forest Soil	VKAYSSARTKVFVIKQTMTDEDFMVIYVDRKYGNAYYDRYRNNWIPCAIEEHEEGRALHLDRKSGALVCYGYGHENNYIRGRRYKILEIDVDE*
Ga0126306_100210796	3300010166	Serpentine Soil	NEGLRRLKMIDTGGIVVIYVDRKYGNAYYDRYRNNWIRCAVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYRILEIDVDE*
Ga0126306_100609602	3300010166	Serpentine Soil	MTDDEFVVIYVDRKHGNAYYDRYRNIWIRCSVEHEEGRALHLDKKSGALVCYGHGHENNYIRGRRYKIVEIDVDE*
Ga0126306_100677521	3300010166	Serpentine Soil	MTDEILVIYVDRKHGNAYYDRYRNIWIRCAVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE*
Ga0126306_103563082	3300010166	Serpentine Soil	VIYIDRKHGNAYYDRYRNNWIPCAVEHHDEEGRALHLDKKSGALVCYGYGHENNYIRGRRYRIVEIDVDE*
Ga0126306_104554013	3300010166	Serpentine Soil	VIYVDRKYGNAYYDRYRNNWIRCAIEHEEGKALHLDKKSGALVCYGYGHENNNYIRGLRYKIVEIDVDE*
Ga0126306_112796371	3300010166	Serpentine Soil	MTDDEIVVIYIDRKHGNAYYDRYRNNWIPCAVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE*
Ga0182000_100261931	3300014487	Soil	MTDDKFVVVYVDRKHGNAYYDRYRNNWIECAVEQHEEGRALHLDKKSGALVCYGYGHENNYIRGRKYKIVEIDVDE*
Ga0182001_100478963	3300014488	Soil	MTNDEIVVVYIDRKYANAYYDRYRNNWIPCAVEHEEGRALHLDKMSGALVCYGYGHENDYIRGRKYKVVEIDVDE*
Ga0182001_106168523	3300014488	Soil	MRDDELVVIYVDRKHGNDYYDRYRNNWIMCDVEHEEGRALHLDKKSGALVCYGYEHENNYIKGLRYKIVEIDVDE*
Ga0190275_100906632	3300018432	Soil	MTADDFMVIYVDRKYGNAYYDRYRNNWIRCSVEEHEEGRALHVDKSSGALVCYGYGHENNYIRGRRYKIVEIDVDE
Ga0190275_101517205	3300018432	Soil	MRDDEFVVIYVDRMHGNAYYDRYRNNWIMCAVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE
Ga0190268_120947922	3300018466	Soil	MRDDEFVVIYVDRKHGNAYYDRYRNNWIMCAVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE
Ga0193604_10304901	3300019132	Soil	MTDEIVVIYIDRKYGNAYYDRYRSNWIPCAVEHEEGRALHVDKKSGALVCYGYEHENNYIKGRRYRIVEID
Ga0190267_102701232	3300019767	Soil	MTDEEFVVIYVDRKHGNAYYDRYRNNWIPCSVEEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE
Ga0196959_100693932	3300021184	Soil	MSDDFVVIYVDRKYGNAYYDRYRNNWICCKVEHEEGRALHLDKKSGALVCYGHGHENNYIRGQEYRVVEIDVDE
Ga0209387_11551632	3300027639	Agricultural Soil	MSDEFAVIYVDRKYGNAYYDRYRNNWICCEVEHEEGKALHLDKKSGALICYGYGHENNYIRGRRYKIVEIDVDE
Ga0209814_103755471	3300027873	Populus Rhizosphere	MRDDEFVVIYVDRKHGNAYYDRYRNNWIMCDVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRKYKIVEIDVDE
Ga0209486_100316933	3300027886	Agricultural Soil	MRDDEFVVIYVDRKHGNAYYDRYRNNWIMCAVEHEEGRALHLDKKSGALVCYGHGHENNYIRGRRYKIVEIDVDE
Ga0209382_112211281	3300027909	Populus Rhizosphere	MRDDEFVVIYVDRKHGNAYYDRYRNNWIMCDVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE
Ga0268242_10205341	3300030513	Soil	MTNDEIVVVYIDRKYANAYYDRYRNNWIPCAVEHEEGRALHLDKMSGALVCYGYGHENDYIRGRKYKVVEIDVDE
Ga0268386_109503031	3300030619	Soil	MRDDEFVVIYVDRMHGTAYYDRYRNNWIRCAVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVEE
Ga0299914_100187955	3300031228	Soil	MRDDEFVVIYVDRMHGTAYYDRYRNNWIRCAVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE
Ga0299913_111378751	3300031229	Soil	MRDDEFVVIYVDRMHGTAYYDRYRNNWIRCAVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVE
Ga0307408_1000103127	3300031548	Rhizosphere	MTNDEFVVIYIDRKHGNAYYDRYRNNWIACSVEEHQDGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE
Ga0307405_110336433	3300031731	Rhizosphere	EEFVVIYVDRKHGNAYYDRYRNNWIECTVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE
Ga0307405_111983201	3300031731	Rhizosphere	MTDEEFVVIYVDRKHGNAYHDRYRNNWIECAVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE
Ga0307413_100676764	3300031824	Rhizosphere	FRRLNKKMTDEEFVVIYVDRKHGNAYYDRYRNNWIECTVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE
Ga0307410_100278211	3300031852	Rhizosphere	NKKMTDEEFVVIYVDRKHGNAYYDRYRNNWIECTVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE
Ga0307410_104752441	3300031852	Rhizosphere	MTDDEFVVIYVDRKHGNAYHDRYRNNWIRCAVEHHEEGRALHLDRKSGALVCYGYGHENNYIRGRKYKIVEIDVDE
Ga0307406_101228004	3300031901	Rhizosphere	MTDEEFVVIYVDRKHGNAYYDRYRNNWIECTVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE
Ga0307406_113701521	3300031901	Rhizosphere	MTDDEFVVIYVDRKHGNAYYDRYRNIWIRCSVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE
Ga0307412_108811571	3300031911	Rhizosphere	MTDDEFVVIYVDRKHGNAYHDRYRNNWIRCAVEHHEEGRALHLDRKSGALVCYGYGYGHENNYIRGRK
Ga0307412_115031111	3300031911	Rhizosphere	VIYVDRKHGNAYHDRYRNNWIECAVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE
Ga0307409_1000553911	3300031995	Rhizosphere	VIYVDRKHGNAYHDRYRNNWIECTVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE
Ga0307409_1011206762	3300031995	Rhizosphere	MTDEEFVVIYVDRKHGNAYHDRYRNNWIECTVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE
Ga0307409_1024073931	3300031995	Rhizosphere	MTDDEFVVIYVDRKHGNAYHDRYRNNWIRCAVEHHEEGRALHLDRKSGALVCYGYGYGHENNYIRGRKYKIVEIDVDE
Ga0307416_1010002951	3300032002	Rhizosphere	MTDEIVVIYVDRKHGNAYYDRYRNNWIRCAVEHEEGRALHLDKMSGALVCYGYGHENNYIRGRRYKIVEIDVDE
Ga0307414_108047471	3300032004	Rhizosphere	MTDDEFVVIYVDRKHGNAYYDRYRNIWIGCSVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE
Ga0307414_109032122	3300032004	Rhizosphere	VIYVDRKHGNAYYDRYRNNWIRCAVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRRYKIVEIDVDE
Ga0307414_114419991	3300032004	Rhizosphere	MTNDEFVVIYIDRKHGNAYYDRYRNNWIACSVEEHQDGRALHLDKKSGALVCYGYGHENNYIR
Ga0307415_1023618721	3300032126	Rhizosphere	MTDDEFVVIYVDRKHGNAYYDRYRNNWIRCAVVHEEGRALHLDRKSGALVCYGYGHENNYIRGRRYKIVEIDVDE
Ga0268251_100914302	3300032159	Agave	MTDKEFLVIYVDRKYGNAYYDRYRNNWIRCEVEEHEEGKALHIDKKTGALVCYGYRHENNYIRGRRYKIVEIDVDE
Ga0334932_002868_1891_2109	3300034174	Sub-Biocrust Soil	MTDEFVVIYVDRKHGNAYNDRYRNNWIPCAVEHEEARALHLDRKSGALVCYGYGHENNYIKGRRYKIVEIDE
Ga0334932_031686_484_711	3300034174	Sub-Biocrust Soil	MTNDEFVVIHVDRKHGNAYYDRYRNNWIPCSVEHEEGRALHLDKKSGALVCYGYGHENNYIRGRKYRIVEIDVDE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098011

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences