Metagenome Family F098012

Basic Information
Family ID	F098012
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	48 residues
Representative Sequence	AGFSEGTIIKRIEDSPVDFDLSPAKLDELFKRRVTDAIIAAMRAAMGGK
Number of Associated Samples	85
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (13.462 % of family members)
Environment Ontology (ENVO)	Unclassified (55.769 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (75.962 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.66% β-sheet: 0.00% Coil/Unstructured: 62.34%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF04055	Radical_SAM	8.65
PF04116	FA_hydroxylase	5.77
PF13353	Fer4_12	2.88
PF00218	IGPS	0.96
PF01979	Amidohydro_1	0.96
PF01975	SurE	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	5.77
COG0134	Indole-3-glycerol phosphate synthase	Amino acid transport and metabolism [E]	0.96
COG0496	Broad specificity polyphosphatase and 5'/3'-nucleotidase SurE	Replication, recombination and repair [L]	0.96

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	65.38%
Environmental	Environmental	34.62%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	65.38%
Terrestrial	Environmental → Terrestrial	32.69%
Aquatic	Environmental → Aquatic	1.92%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	37.50%
Soil	Environmental → Terrestrial → Soil	32.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	25.96%
Marine	Environmental → Aquatic → Marine	1.92%
Roots	Host-Associated → Plants → Roots	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	28.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	24.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	21.15%
Loam	Environmental → Terrestrial → Soil → Loam	11.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.65%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	28.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	24.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.73%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.92%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.96%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	13.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	6.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.85%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.88%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.96%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013760	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C3.rep2	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025796	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027266	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055468_101882701	3300003993	Natural And Restored Wetlands	EAGFSEGTIIKRIEESPVEFDLSPTKLNELQKRRVTEPIIAAMTLAMGGDLKP*
Ga0062593_1009286482	3300004114	Soil	GFSEGTIIKRIEESPVEFDLSPARIADLQKRRVSEAIIAAMNAAMGVK*
Ga0062595_1018084571	3300004479	Soil	FSEGTIIKRIEESPVDFDLSPAKVVELQKRRVTEAVIAAMNAAMGK*
Ga0062595_1027052702	3300004479	Soil	EGTIIKRIEESPVDFDLSPPKLAELHKRRVTDAIIAAMTAAMGSESRPN*
Ga0062591_1024680451	3300004643	Soil	TNEGVIKLVEAGFSEGTIIKRIEESPVDFDLSPAKLDELFKRRVTDAIIAAMRAAMGK*
Ga0062594_1024247191	3300005093	Soil	SEGTIIKRIEDSPVDFDLSPAKLDELFKKRVTDAIIAAMRAAMGK*
Ga0065715_104911421	3300005293	Miscanthus Rhizosphere	IIKRIEESPVDFDLSPAKLAELHKRRVTDAIIVAMSAAMGSESRPN*
Ga0070676_113182291	3300005328	Miscanthus Rhizosphere	NEGVIRLVEAGFSEGTIIKRIEESPVEFDLSPAKLDELFKKRVTDAIIAAMRAAMGGK*
Ga0070690_1003767221	3300005330	Switchgrass Rhizosphere	IKLVEAGFSEGTIIKRIEDSPVDFDLSPAKLDELFKRRVTDAIIAAMRAAMGGK*
Ga0066388_1024470771	3300005332	Tropical Forest Soil	LVEAGFSEGTIIKRIEESPVDFDLSPGKIVELQKKRVSEAVIAAMTAAMGK*
Ga0070677_104274461	3300005333	Miscanthus Rhizosphere	EGTIIKRIEESPVEFDLSPAKLDELFKKRVTDAIIAAMRAAMGGK*
Ga0070692_110531051	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	EESPVEFDLSPAKVDELHKRRVTDAIIAAMSTAMGVDPKP*
Ga0070669_1008470231	3300005353	Switchgrass Rhizosphere	AGFSEGTIIKRIEESPVDFDFSPGKLDELYKKRVTDAIIAAMRTAMGDK*
Ga0070669_1018527071	3300005353	Switchgrass Rhizosphere	EGVIRLVEAGFSEGTIIKRIEESPVDFDLSPAKITDLQKRRVSEAIIAAMNAAMGDK*
Ga0070705_1009125001	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	KRIEESPVDFDFSPGKLDELYKKRVTDAIIAAMRTAMGDK*
Ga0070700_1011873402	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	TNEGVIKLVEAGFSEGTIIKRIEDSPVEFDLSPAKLDELFKRRVTDAIIAAMRAAMGGK*
Ga0070694_1019114972	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VIQLVDAGFSEGTIIKRIEESPVDFDLSPPKLAELHKRRVTDAIIAAMTAAMGSESRPN*
Ga0068867_1022676201	3300005459	Miscanthus Rhizosphere	FSEGTIIKRIEESPVEFDLSPARIADLQKRRVSEAIIAAMNAAMGVK*
Ga0070699_1016859161	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	EAGFSEGTIIKRIEDSPVEFDLSPAKLDELFKKRVTDAIIAAMRAAVGDK*
Ga0070679_1017164492	3300005530	Corn Rhizosphere	RLVEAGFSEGTIIKRIEDSPVEFDLSPAKLDELFKKRVTDAIIAAMRAAMGDK*
Ga0068853_1023895461	3300005539	Corn Rhizosphere	EAGFSEGTIIKRIEESPVDFDLSPAKITDLQKRRVSEAIIAAMNAAMGDK*
Ga0070672_1019710121	3300005543	Miscanthus Rhizosphere	SEGTIIKRIEESPVEFDLSPAKLDELFKKRVTDAIIAAMRTAMGGK*
Ga0070696_1002122172	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	FSEGTIIKRIEDSPVDFDLSPAKVVELQKRRVSEAIIAAMNAAMGK*
Ga0070704_1007282231	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	IIKRIEESPVDFDLSPPKLAELHKRRVTDAIIAAMTAAMGSESRPN*
Ga0070664_1008307311	3300005564	Corn Rhizosphere	AGFSEGTIIKRIEDSPVDFDLSPAKLDELFKRRVTDAIIAAMRAAMGGK*
Ga0068854_1016091552	3300005578	Corn Rhizosphere	GTIIKRIEESPVDFDLSPGKLDELYKKRVTDQIVAAMAAAMGKDR*
Ga0070702_1015171131	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	SEGTIIKRIEESPVDFDLSPAKITDLQKRRVSEAIIAAMNAAMGDK*
Ga0068852_1006678552	3300005616	Corn Rhizosphere	IIKRIEESPVDFDLSPGKLDDLFKKRVTDQIIAAMRAAMGK*
Ga0068859_1000114919	3300005617	Switchgrass Rhizosphere	ESPVDFDLSPGKLDELYKKRVTDQIVAAMAAAMGKDR*
Ga0068859_1025596111	3300005617	Switchgrass Rhizosphere	IIKRIEESPVEFDLSPAKLDELFKKRVTDAIIAAMRAAMGGK*
Ga0068864_1003182911	3300005618	Switchgrass Rhizosphere	EAGFSEGTIIKRIQESPVDFDLSPGKLDELYKKRVTDPIVAAMAAAMGKDR*
Ga0068863_1009155821	3300005841	Switchgrass Rhizosphere	TLTNEGVIKLVDAGFSEGTIIKRIEQSPVDFDFSPGKLDELYKRRVSDTIVAAMRAAMGNN*
Ga0068863_1022616142	3300005841	Switchgrass Rhizosphere	EESPVDFDLSPAKLDELFKKRVSDAIIAAMRTAMGGK*
Ga0068858_1006587022	3300005842	Switchgrass Rhizosphere	EESPVEFDLSPAKLDELFKKRVTDAIIAAMRTAMGGK*
Ga0068860_1005725262	3300005843	Switchgrass Rhizosphere	IRLVEAGFSEGTIIKRIEESPVDFDLSPAKVIELQKKRVSDTVIAAMNAAMGK*
Ga0068862_1004642922	3300005844	Switchgrass Rhizosphere	RIEESPVDFDLSPGKLDELYKKRVTDQIVAAMAAAMGKDR*
Ga0068862_1006897521	3300005844	Switchgrass Rhizosphere	EGTIIKRIEESPVDFDLSPAKLDELFKRRVTDAIIAAMRAAMGK*
Ga0082029_10225171	3300006169	Termite Nest	ESPVDFDLSPAKVVELQKRRVSEAVIAAMNAAMGK*
Ga0075421_1000739665	3300006845	Populus Rhizosphere	TIIKRIEESPVDFDLSPGKLDELYKKRVTDAIIAAMATAMGKDR*
Ga0079216_100524612	3300006918	Agricultural Soil	GVIQLVEAGFSEGTIIKRIESSPVEFDLSPAKLAELQKRRVSDAIIAAMSAAMGIESRPK
Ga0075419_101529662	3300006969	Populus Rhizosphere	IKRIEESPVDFDLSPGKLDELYKKRVTDAIIAAMATAMGKDR*
Ga0075419_113387801	3300006969	Populus Rhizosphere	EGTIIKRIEESPVDFDLSPGKLDELYKKRVTDAIIAAMSAAMGKDR*
Ga0075435_1010018442	3300007076	Populus Rhizosphere	IKRIEESPVDFDLSPAKIEELHKRRVTDAIITAMTAAMGR*
Ga0114129_121964391	3300009147	Populus Rhizosphere	IEDSPVDFDLSPGKLDELFKRRVTDAIIAAMRAAMGK*
Ga0111538_120366331	3300009156	Populus Rhizosphere	IKLVEAGFSEGTIIKRIESSPVEFDLSPSKLAELQKRRVTEPIIAAMTAAMSEGDPRPSN
Ga0075423_108347492	3300009162	Populus Rhizosphere	TIIKRIEESPVDFDLSPAKVVELQKRRVSEAIIAAMNAAMGK*
Ga0075423_126909922	3300009162	Populus Rhizosphere	FSEGTIIKRIEESPVEFDLSPAKLDELFKKRVTDAIIAAMRAAMGK*
Ga0105241_122958241	3300009174	Corn Rhizosphere	FSEGTIIKRIEDSPVDFDLSPVKLDELFKRRVSDAIIAAMKAAMGGK*
Ga0105248_101592972	3300009177	Switchgrass Rhizosphere	FSEGTIIKRIEGSPADFDLSPAKLDELHKRRVTEAIITAMTQAMTDKG*
Ga0105248_114621542	3300009177	Switchgrass Rhizosphere	VIKLVEAGFSEGTIIKRIEESPVDFDLSPAKLDELYKKRVTDAIIAAMSLAMGKDR*
Ga0105248_115952431	3300009177	Switchgrass Rhizosphere	TNEGVIRLVEAGFSEGTIIKRIEGSPVDFDLSPAKVVELQKRRVTEPIIAAMNAAMGK*
Ga0105249_114271942	3300009553	Switchgrass Rhizosphere	RIEQSPVDFDFSPGKLDELYKRRVSDAIVAAMRAAMGK*
Ga0105249_128397081	3300009553	Switchgrass Rhizosphere	VIKLVDAGFSEGTIIKRIEDSPVDFDLSPAKLDELFKRRVTDAIIAAMRAAMGGK*
Ga0126313_116733301	3300009840	Serpentine Soil	RIEESPVEFDLSPAKIVDLQKRRVSEAIIAAMNAAMGGK*
Ga0126305_106460031	3300010036	Serpentine Soil	KRIEESPVDFDLSPARVDELQKRRVTDPIIAAMRTAMGDK*
Ga0126314_103084362	3300010042	Serpentine Soil	LVEAGFSEGTIIKRIEGSPVNFDLSPAKIEELHKKRVTDSIIAAMTAAMGDKD*
Ga0105239_124587611	3300010375	Corn Rhizosphere	IIKRIEDSPVDFDLSPAKLDELFKRRVTDAIIAAMRAAMGGK*
Ga0134124_117372761	3300010397	Terrestrial Soil	QESPVDFDLSPGKLDELFKKRVTDAIIAAMREAMGDK*
Ga0134124_120297162	3300010397	Terrestrial Soil	KLVEAGFSEGTIIKRSEDSPVDFDLSPAKLDELFKRRVTDAIIAAMRTAMGGK*
Ga0134124_127345191	3300010397	Terrestrial Soil	EGVIKLVEAGFSEGTIIKRIEDSPVDFDLSPAKLDELFKRRVTDAIIAAMRAAMGGK*
Ga0134127_114823281	3300010399	Terrestrial Soil	IRLVEAGFSEGTIIKRIEESPVDFDLSPAKITDLQKRRVSEAIIAAMNAAMGDK*
Ga0134122_110088031	3300010400	Terrestrial Soil	GFSEGTIIKRIEESPVEFDLSPVKLDELFKKRVTDAIIAAMRTAMGGK*
Ga0134123_104975192	3300010403	Terrestrial Soil	FSEGTIIKRIEDSPVDFDLSPGKLDELFKKRVTDAIIAAMRAAMGGK*
Ga0105246_105450261	3300011119	Miscanthus Rhizosphere	EDSPVEFDLSPAKLDELFKKRVTDAIIAAMRAAMGDK*
Ga0105246_119101031	3300011119	Miscanthus Rhizosphere	EGVIRLVEAGFSEGTIIKRIEESPVEFDLSPAKLDELFKKRVTDAIIAAMRAAMGGK*
Ga0164303_106736602	3300012957	Soil	VEAGFSEGTIIKRIEESPVEFDLAPVKLDELFKKRVTDAIIAAMRAAMGDK*
Ga0157373_101947113	3300013100	Corn Rhizosphere	KRIEESPVDFDLSPGKLDELYKKRVTDQIVAAMAAAMGKDR*
Ga0157371_103762401	3300013102	Corn Rhizosphere	IIKRIEDSPVDFDLSPAKLDELFKRRVTDAIIAAMRAAMGK*
Ga0157371_107624471	3300013102	Corn Rhizosphere	DAGFSEGTIIKRIEQSPVDFDFSPGKLDELYKRRVSDTIVAAMRAAMGNN*
Ga0157374_110916121	3300013296	Miscanthus Rhizosphere	GTIIKRIEDSPVEFDLSPVKLDELFKRRVTDAIIAAMRAAMGGK*
Ga0157378_110040522	3300013297	Miscanthus Rhizosphere	GFSEGTIIKRIEDSPVDFDLSPAKVVELQKRRVSEAIIAAMNAAIGK*
Ga0163162_115234952	3300013306	Switchgrass Rhizosphere	AGFSEGTIIKRIEQSPVDFDFSPGKLDELYKRRVSDAIVAAMRAAMGGK*
Ga0157372_116551361	3300013307	Corn Rhizosphere	AGFSEGTIIKRIEQSPVDFDLSPGKIAELYKRRVTDAIIAAMTAAMGSESRPN*
Ga0157372_127130761	3300013307	Corn Rhizosphere	AGFSEGTIIKRIEGSPVDFDLSPAKIEELHKRRVTDPIIAAMTAAMGDK*
Ga0157375_137921021	3300013308	Miscanthus Rhizosphere	EASPVDFDLSPAKIAELQKRRVTDAIIAAMSAAMGLDPKP*
Ga0120188_10242771	3300013760	Terrestrial	VIRLVEAGFSEGTIIKRIEESPVDFDLSPGKLDELYKKRVTDAIVAAMRAAMGDQ*
Ga0163163_112974481	3300014325	Switchgrass Rhizosphere	GFSEGTIIKCIEDSPVEFDLSPAKLDELFKRRVSDAIITAMKAAMGSK*
Ga0163163_123892581	3300014325	Switchgrass Rhizosphere	AAVIRLVDAGFSEGTIIKRIEGSPADFDLSPTKLDELHKRRVTDAIITAMTQAMTDKG*
Ga0157380_126981411	3300014326	Switchgrass Rhizosphere	IIKRIEESPVEFDLSPGKLDELYKKRVTDQIIAAMAAAMGKDR*
Ga0157377_102322043	3300014745	Miscanthus Rhizosphere	ESPVDFDLSPGKLDELYKKRVTDQIIAAMSAAMGKDR*
Ga0132255_1027920221	3300015374	Arabidopsis Rhizosphere	GFSEGTIIKRIEDSPVDFDLSPGKLDELFKRRVSDAIVAAMRAAMGDK*
Ga0163161_110592411	3300017792	Switchgrass Rhizosphere	SPVDFDLSPGKLDELFKRRVSDAIIAAMRAAMGGK
Ga0247668_10906801	3300024331	Soil	EESPVDFDLSPAKLDELFKKRVTDAIIAAMRTAMGK
Ga0210113_10846221	3300025796	Natural And Restored Wetlands	EAGFSEGTIIKRIEESPVEFDLSPTKLNELQKRRVTEPIIAAMTLAMGGDLKP
Ga0207647_106789562	3300025904	Corn Rhizosphere	KTPTLNNDGVIRLVEAGFSEGTIIKRIEESPVDFDFSPGKLDELYKKRVTDAIIAAMRTAMGDK
Ga0207681_104800883	3300025923	Switchgrass Rhizosphere	GVIRLVEAGFSEGTIIKRIEESPVDFDFSPGKLDELYKKRVTDAIIAAMRTAMGDK
Ga0207650_101882841	3300025925	Switchgrass Rhizosphere	AGFSEGTIIKRIEESPVDFDFSPGKLDELYKKRVTDAIIAAMRTAMGDK
Ga0207701_103934022	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	KLVDAGFSEGTIIKRIEDSPVDFDLSPAKLDELFKRRVSDAIITAMKAAMGGK
Ga0207706_116828941	3300025933	Corn Rhizosphere	DGVIRLVEAGFSEGTIIKRIEESPVDFDLSPGKLDELYKKRVTDQIIAAMAAAMGKDR
Ga0207709_117670291	3300025935	Miscanthus Rhizosphere	VIKLVEAGFSEGTIIKRIEDSPVDFDLSPAKLDELFKRRVTDAIIAAMRAAMGGK
Ga0207711_110678022	3300025941	Switchgrass Rhizosphere	FSEGTIIKRIEESPVDFDLSPAKLDELYKKRVTDAIIAAMSLAMGKDR
Ga0207711_112798971	3300025941	Switchgrass Rhizosphere	SEGTIIKRIEGSPADFDLSPAKLDELHKRRVTEAIITAMTQAMTDKG
Ga0207689_102089673	3300025942	Miscanthus Rhizosphere	SEGTIIKRIEESPVDFDLSPGKLDELYKKRVTDQIIAAMAAAMGKDR
Ga0207640_111951161	3300025981	Corn Rhizosphere	VIRLVEAGFSEGTIIKRIEESPVDFDLSPGKLDELYKKRVTDQIVAAMAAAMGKDR
Ga0207703_103100391	3300026035	Switchgrass Rhizosphere	IIKRIEESPVDFDLSPGKLDELFKKRVTDQIIAAMRAAMGK
Ga0207703_121944441	3300026035	Switchgrass Rhizosphere	KLVEAGFSEGTIIKRIEDSPVDFDLSPAKLDELFKRRVTDAIIAAMRAAMGGK
Ga0207641_100626561	3300026088	Switchgrass Rhizosphere	GTIIKRIEQSPVDFDFSPGKLDELYKRRVSDTIVAAMRAAMGNN
Ga0207676_125405321	3300026095	Switchgrass Rhizosphere	VEAGFSEGTIIKRIEGSPVDFDLSPAKVVELQKRRVTEPIIAAMNAAMGK
Ga0207674_110629881	3300026116	Corn Rhizosphere	ESPVDFDLSPGKIEELYKKRVTDQIVAAMAAAMGKDQ
Ga0207674_110984361	3300026116	Corn Rhizosphere	IIKRIEESPVDFDLSPAKLDELFKRRVTDAIIAAMRAAMGK
Ga0207675_1001966012	3300026118	Switchgrass Rhizosphere	VIRLVEAGFSEGTIIKRIEESPVDFDLSPARIADLQKRRVSEAIIAAMNAAMGDK
Ga0209215_10017552	3300027266	Forest Soil	AGFSEGTIIKRIEESPVDFDLSPAKLDELHKHRVTDPIIVAMRAAMGSDPKP
Ga0209486_100175161	3300027886	Agricultural Soil	IIKRIESSPVEFDLSPAKLAELQKRRVSDAIIAAMSAAMGIESRPK
Ga0310888_101915732	3300031538	Soil	EAGFSEGTIIKRIEDSPVDFDLSPAKLDELFKRRVTDAIIAAMRAAMGGK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098012

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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