Metagenome / Metatranscriptome Family F098090

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098090
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	99 residues
Representative Sequence	MNQGHWLKTLIWGFIAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGV
Number of Associated Samples	86
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	9.00 %
% of genes near scaffold ends (potentially truncated)	95.19 %
% of genes from short scaffolds (< 2000 bps)	94.23 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.231 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (38.462 % of family members)
Environment Ontology (ENVO)	Unclassified (40.385 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.846 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.55% β-sheet: 0.00% Coil/Unstructured: 34.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF06742	DUF1214	15.38
PF00756	Esterase	7.69
PF06863	DUF1254	4.81
PF03200	Glyco_hydro_63	3.85
PF07681	DoxX	2.88
PF13535	ATP-grasp_4	1.92
PF00296	Bac_luciferase	1.92
PF00291	PALP	0.96
PF13561	adh_short_C2	0.96
PF03479	PCC	0.96
PF00140	Sigma70_r1_2	0.96
PF08281	Sigma70_r4_2	0.96
PF01965	DJ-1_PfpI	0.96
PF05742	TANGO2	0.96
PF01625	PMSR	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	20.19
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	15.38
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	2.88
COG4270	Uncharacterized membrane protein	Function unknown [S]	2.88
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.92
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.96
COG1661	Predicted DNA-binding protein with PD1-like DNA-binding motif, PPC/DUF296 domain	General function prediction only [R]	0.96
COG3332	Uncharacterized stress-responsive protein, TANGO2 (Transport and Golgi organisation 2) family, contains NRDE motif	General function prediction only [R]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.19 %
Unclassified	root	N/A	4.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.19 %
Unclassified	root	N/A	4.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.23 %
Unclassified	root	N/A	4.81 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	58.65 %
Unclassified	root	N/A	4.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.96 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.96 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	58.65 %
Unclassified	root	N/A	4.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.92 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.96 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.96 %

Name	Rank	Taxonomy	Distribution
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	53.85 %
Unclassified	root	N/A	4.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.92 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.96 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.96 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.96 %

Name	Rank	Taxonomy	Distribution
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	53.85 %
Unclassified	root	N/A	4.81 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.92 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.96 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	43.27 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	10.58 %
Unclassified	root	N/A	4.81 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	1.92 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	0.96 %
Deuterostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	43.27 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	10.58 %
Unclassified	root	N/A	4.81 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	1.92 %
Chordata	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata	0.96 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	43.27 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	10.58 %
Unclassified	root	N/A	4.81 %
Rhizobium sullae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium sullae	1.92 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	0.96 %
Cephalochordata	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Cephalochordata	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	43.27 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	10.58 %
Unclassified	root	N/A	4.81 %
Rhizobium sullae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium sullae	1.92 %
Leptocardii	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Cephalochordata → Leptocardii	0.96 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	43.27 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	10.58 %
Unclassified	root	N/A	4.81 %
Rhizobium sullae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium sullae	1.92 %
Amphioxiformes	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Cephalochordata → Leptocardii → Amphioxiformes	0.96 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	43.27 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	10.58 %
Unclassified	root	N/A	4.81 %
Rhizobium sullae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium sullae	1.92 %
Branchiostomidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Cephalochordata → Leptocardii → Amphioxiformes → Branchiostomidae	0.96 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	43.27 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	10.58 %
Unclassified	root	N/A	4.81 %
Rhizobium sullae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium sullae	1.92 %
Branchiostoma	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Cephalochordata → Leptocardii → Amphioxiformes → Branchiostomidae → Branchiostoma	0.96 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	43.27 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	10.58 %
Unclassified	root	N/A	4.81 %
Rhizobium sullae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium sullae	1.92 %
Branchiostoma lanceolatum	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Cephalochordata → Leptocardii → Amphioxiformes → Branchiostomidae → Branchiostoma → Branchiostoma lanceolatum	0.96 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q02G2BDV	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	510	Open in IMG/M
2170459023\|GZGNO2B01CJ0EN	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	508	Open in IMG/M
3300002911\|JGI25390J43892_10066148	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300004479\|Ga0062595_101425126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	633	Open in IMG/M
3300005166\|Ga0066674_10092556	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300005175\|Ga0066673_10890874	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005177\|Ga0066690_10361872	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300005437\|Ga0070710_10201968	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1256	Open in IMG/M
3300005437\|Ga0070710_10392864	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300005439\|Ga0070711_100527805	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300005445\|Ga0070708_101809813	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	567	Open in IMG/M
3300005468\|Ga0070707_100855694	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300005536\|Ga0070697_100847901	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300005536\|Ga0070697_101209192	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	673	Open in IMG/M
3300005536\|Ga0070697_102067343	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	510	Open in IMG/M
3300005552\|Ga0066701_10320951	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300005556\|Ga0066707_10336554	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300005586\|Ga0066691_10015390	All Organisms → cellular organisms → Bacteria	3687	Open in IMG/M
3300005598\|Ga0066706_10880409	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300006028\|Ga0070717_11811277	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	552	Open in IMG/M
3300006046\|Ga0066652_100280911	All Organisms → cellular organisms → Bacteria	1470	Open in IMG/M
3300006163\|Ga0070715_11024262	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	516	Open in IMG/M
3300006173\|Ga0070716_101642517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	529	Open in IMG/M
3300006175\|Ga0070712_101139537	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300009038\|Ga0099829_11012084	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	689	Open in IMG/M
3300009137\|Ga0066709_103373994	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Cephalochordata → Leptocardii → Amphioxiformes → Branchiostomidae → Branchiostoma → Branchiostoma lanceolatum	580	Open in IMG/M
3300009143\|Ga0099792_10529232	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	742	Open in IMG/M
3300010036\|Ga0126305_11064735	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	556	Open in IMG/M
3300010333\|Ga0134080_10058661	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300010337\|Ga0134062_10353470	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300012201\|Ga0137365_10045171	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3349	Open in IMG/M
3300012201\|Ga0137365_10831063	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	674	Open in IMG/M
3300012201\|Ga0137365_10873235	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	657	Open in IMG/M
3300012202\|Ga0137363_10398857	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1146	Open in IMG/M
3300012205\|Ga0137362_10427145	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1147	Open in IMG/M
3300012207\|Ga0137381_10867575	Not Available	781	Open in IMG/M
3300012209\|Ga0137379_10199393	All Organisms → cellular organisms → Bacteria	1914	Open in IMG/M
3300012209\|Ga0137379_10308580	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1493	Open in IMG/M
3300012209\|Ga0137379_10992947	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	744	Open in IMG/M
3300012210\|Ga0137378_10267931	All Organisms → cellular organisms → Bacteria	1589	Open in IMG/M
3300012211\|Ga0137377_11110322	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	721	Open in IMG/M
3300012285\|Ga0137370_10353662	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300012350\|Ga0137372_10821040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	666	Open in IMG/M
3300012356\|Ga0137371_10353191	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1142	Open in IMG/M
3300012361\|Ga0137360_10290983	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1354	Open in IMG/M
3300012361\|Ga0137360_10801475	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	811	Open in IMG/M
3300012361\|Ga0137360_11489731	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	581	Open in IMG/M
3300012362\|Ga0137361_10257671	All Organisms → cellular organisms → Bacteria	1590	Open in IMG/M
3300012362\|Ga0137361_11411503	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	619	Open in IMG/M
3300012582\|Ga0137358_10717627	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300012582\|Ga0137358_10955283	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	558	Open in IMG/M
3300012684\|Ga0136614_10935183	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	599	Open in IMG/M
3300012685\|Ga0137397_10544563	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	864	Open in IMG/M
3300012918\|Ga0137396_10488189	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	913	Open in IMG/M
3300012923\|Ga0137359_10444198	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300012924\|Ga0137413_11317374	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	580	Open in IMG/M
3300012925\|Ga0137419_11799110	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	524	Open in IMG/M
3300012930\|Ga0137407_12299282	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	515	Open in IMG/M
3300012951\|Ga0164300_11156995	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	510	Open in IMG/M
3300012985\|Ga0164308_10727586	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	858	Open in IMG/M
3300013297\|Ga0157378_13256725	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	504	Open in IMG/M
3300015053\|Ga0137405_1220897	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300015241\|Ga0137418_10745382	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	743	Open in IMG/M
3300015245\|Ga0137409_11159417	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	613	Open in IMG/M
3300017654\|Ga0134069_1274592	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	591	Open in IMG/M
3300018468\|Ga0066662_13023332	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300019789\|Ga0137408_1162856	All Organisms → cellular organisms → Bacteria	1854	Open in IMG/M
3300019789\|Ga0137408_1169384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium sullae	1177	Open in IMG/M
3300019789\|Ga0137408_1225831	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300020170\|Ga0179594_10150916	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	859	Open in IMG/M
3300021086\|Ga0179596_10298968	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	803	Open in IMG/M
3300021418\|Ga0193695_1053375	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300025905\|Ga0207685_10482600	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	649	Open in IMG/M
3300025916\|Ga0207663_10277027	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1245	Open in IMG/M
3300025929\|Ga0207664_11736910	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	546	Open in IMG/M
3300026304\|Ga0209240_1258584	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	533	Open in IMG/M
3300026475\|Ga0257147_1009127	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300026489\|Ga0257160_1075364	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	599	Open in IMG/M
3300026490\|Ga0257153_1085834	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	630	Open in IMG/M
3300026494\|Ga0257159_1063194	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	634	Open in IMG/M
3300026523\|Ga0209808_1209676	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	638	Open in IMG/M
3300026524\|Ga0209690_1137680	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	925	Open in IMG/M
3300026532\|Ga0209160_1240068	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300026540\|Ga0209376_1137293	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1189	Open in IMG/M
3300026540\|Ga0209376_1402427	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300026548\|Ga0209161_10198337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium sullae	1112	Open in IMG/M
3300026548\|Ga0209161_10423746	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	584	Open in IMG/M
3300026551\|Ga0209648_10608593	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	601	Open in IMG/M
3300028536\|Ga0137415_10610006	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	902	Open in IMG/M
3300028791\|Ga0307290_10165843	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300030842\|Ga0075404_11492330	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	510	Open in IMG/M
3300030847\|Ga0075405_11880799	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	610	Open in IMG/M
3300030916\|Ga0075386_12038567	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	534	Open in IMG/M
3300030974\|Ga0075371_11830477	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	764	Open in IMG/M
3300031122\|Ga0170822_13560476	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	987	Open in IMG/M
3300031231\|Ga0170824_112323139	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	742	Open in IMG/M
3300031446\|Ga0170820_15676041	All Organisms → cellular organisms → Bacteria	1870	Open in IMG/M
3300031469\|Ga0170819_11598098	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300031469\|Ga0170819_14335110	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1409	Open in IMG/M
3300032180\|Ga0307471_100921910	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.04%
Host-Associated	Host-Associated	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.08%
Aquatic	Environmental → Aquatic	0.96%
Plants	Host-Associated → Plants	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.08%
Freshwater	Environmental → Aquatic → Freshwater	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.69%
Loam	Environmental → Terrestrial → Soil → Loam	15.38%
Ice	Environmental → Aquatic → Freshwater → Ice	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	19.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.42%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	38.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.96%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.96%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459023	Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition)	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300030842	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030974	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_03628720	2170459005	Grass Soil	MLNASPRSTDHRHWLKTLIWGFFAGVLAGIAMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFRRFGGTTNCRGARRCALRVLS
FA3_01381780	2170459023	Grass Soil	RDMPNSSPRSTDRRHWLRTLIRGFIAGALAGLAMLLMMALLRLFLGWPTPTELIFDRLFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVLYALYLRAA
JGI25390J43892_100661481	3300002911	Grasslands Soil	MKQILWLKTLIWGFIAGVLAGLAMLLTMTLLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTAQVIVAGLGGVLYAFYLKHRDRRGGLRPVG
Ga0062595_1014251261	3300004479	Soil	MPNTLPRPKDRPHWLKTLTWGFCAGVLAGIAMLLTMALLRLFLGWPTPTELIFDRLFPLLTVEFFISSLVRAGGYTPLKLQGVFGA
Ga0066674_100925562	3300005166	Soil	MKQILWLKTLIWGFIAGVLAGLAMLLTMALLRLFFGWPTPTELIFDRVFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTA
Ga0066673_108908742	3300005175	Soil	MKQILWLKTLIWGFIAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRVFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTAQVIVAGLGGVLYAFYL
Ga0066690_103618721	3300005177	Soil	MKQILWLKTLIWGFIAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRIFPVLTVEFFIGSLVRAGGYTPLKLQGVFGALTAQVIVAGLGG
Ga0070710_102019682	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSESSRHSLGLQPWIKTLIVGSFAGVLAGIAMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTGQVVVAGLGGVLYAFYLRSRDRRGGLR
Ga0070710_103928642	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPNTLPRSTDRPHWLKALTWGFCAGVLAGLTMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVLY
Ga0070711_1005278052	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSESSRHSLGLQPWIKTLIVGSFAGVLAGIAMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTGQV
Ga0070708_1018098131	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSESSRHSLDPQPWIKTLIVGSFAGALAGIAMLLTMALLRLFLGWPTPTELIFDRIFPLLSVEFFIGSLVRAGGYTPLKLQGVFGALTGQ
Ga0070707_1008556941	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPNTLPGSTDRPHWLKTLTWGFCAGVMAGLTMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVLYAFYLRR
Ga0070697_1008479011	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MANSLAQSSADRHWVKTLIWGFLAGVLGSLAMLLAMALLRLLLGWPTPTELIFDRLFPLLTVEFFISSLVRAGGYTPLKLQGVYGALAGQIF
Ga0070697_1012091921	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSESSRHSLDPQPWIKTLIVGSFAGALAGIAMLLTMALLRLFLGWPTPTELIFDRIFPLLSVEFFIGSLVRAGGYTPLKLQGVFGALTGQVVVAGLGGVLYAFYLRSR
Ga0070697_1020673432	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MLRSSSLLSVKQWINTLIWGFGAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIV
Ga0066701_103209512	3300005552	Soil	MPNSSPGSTDRRHWLRTFILGFIAGTLAGLAMLLMMALLRLFLGWPTPTELIFDRLFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAG
Ga0066707_103365542	3300005556	Soil	LHNMSPSSSDHRPHWLKTLACGLIAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRLFPLLTVEFFISSLVRAGGYTPLKLQGVFGALAGQV
Ga0066691_100153901	3300005586	Soil	LPNTSPSSSDHRPHWLKTLACGLIAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRLFPLLTVEFFISSLVRAGGYTPLKLQGVFGALAGQVIVGGFGGVIYAFYLKRRDRRD
Ga0066706_108804091	3300005598	Soil	MPNSLPRSKDRRHWLRTLTWGFIAGVMAGLAMLLMMAILRLFLGWPTPTELIFDRLFPLLTVEFFISSLVRAGGYTPLKLQGVFGALAGQV
Ga0070717_118112771	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSESSRHSLGLQPWIKTLIVGSFAGVLAGIAMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGV
Ga0066652_1002809111	3300006046	Soil	MSNSSPHSKERSHWLRTLTWGFIAGVMAGLAMLLMMAILRLFLGWPTPTELIFDRLFPLLTVEFFISSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVIY
Ga0070715_110242621	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MANSLSRSSAERHWVKTLIWGFLAGVLASLAMLLAMALLRLLLGWPTPTELIFDRLFPLLTVEFFISSLVRAGGYTPLKLQGVYGA
Ga0070716_1016425171	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSESSRHSLGLQPWIKTLIVGSFAGVLAGIVMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVIYAFYL
Ga0070712_1011395371	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MDRPHWIKTLIWGFIAGVLAGIAMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTGQVVVAGLGGVLYA
Ga0099829_110120841	3300009038	Vadose Zone Soil	MPNTSPSSSDHRPHWLKTLACGLIAGVMAGLAMLLTMALLRLFLGWPTPTELIFDRLFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGFGGIIYAFYL
Ga0066709_1033739941	3300009137	Grasslands Soil	LPNTSPSSSNHRPHWLKTLACGLIAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRLFPLLTVEFFISSLVRAGGYTPLKLQGVFG
Ga0099792_105292321	3300009143	Vadose Zone Soil	MKQILWLKTLIWGFIAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTAQVIVAGLGGILNAFYLKHRDRRGGLRPI
Ga0126305_110647351	3300010036	Serpentine Soil	MNEAVPAKRRSWIGTLGSGFVAGLLAGLAMLLTMALLRLFLGWPTPTELIFDRLFPLLTVEFFISSLVKAGGYTPLKLQGVFGALAGQLAIAGLGGVVYAFYLRWRD
Ga0134080_100586613	3300010333	Grasslands Soil	MKQILWLKTLIWGFIAGVLAGLAMLLTMALLRLFFGWPTPTELIFDRVFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTAQVIVAGLGGVLYAFYLKH
Ga0134062_103534701	3300010337	Grasslands Soil	MKQILWLKTLIWGFIAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRVFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAAQVIVAGLGG
Ga0137365_100451711	3300012201	Vadose Zone Soil	LPNTSPSSYDHRPHWLKTLAYGLIAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRLFPLLTVEFFISSLVRAGGYTPLKLQGVFGALAGQVIVAGL
Ga0137365_108310631	3300012201	Vadose Zone Soil	MPNSSPRSKDLPHGLKTLTWGFSAGVLAGLAMLLTMALLRLLLGWPTPAELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGVGG
Ga0137365_108732352	3300012201	Vadose Zone Soil	MSNSSWLSSNLRDWLKTLTWGFCAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRLFPLLTVEFFISSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVIYAFYLKRRDQRDGA
Ga0137363_103988571	3300012202	Vadose Zone Soil	MPNTSPSSSDNRPHWVKTLAWGLIAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRLFPLLTVEFFISSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVIYALYLK
Ga0137362_104271452	3300012205	Vadose Zone Soil	MSNSSWLSSNLRDWLKTLTWGFCAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRLFPLLTVEFFISSLVSAGGYTPLKLQGVFGALAGQVIVAGLGGVIYAFYLKRR
Ga0137381_108675752	3300012207	Vadose Zone Soil	LPNTSPSSSDHRPHWLKTLACGLIAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRLFPLLTVEFFISSLVRAGGYTPLKLQGVFGALAGQVIVA
Ga0137379_101993934	3300012209	Vadose Zone Soil	MRNSSPRSTDRRHWLRTLIWGFIAGALAGLAMLLMMALLRLFLGWPTPTELVFDRLFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVIYAFYL
Ga0137379_103085801	3300012209	Vadose Zone Soil	LPNTSPSSSDHRPHWLKTLACGLIAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRLFPLLTVEFFISSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVIYAFYLKRRDQRDGA
Ga0137379_109929472	3300012209	Vadose Zone Soil	MPNSPRSKDRRHWLRTLTWGFIAGVIAGLAMLLMMALLRLFLGWPTPTDLIFDRLFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVIYAFYLK
Ga0137378_102679311	3300012210	Vadose Zone Soil	MKQILWLKTLIWGFIAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAAQVIVAGL
Ga0137377_111103221	3300012211	Vadose Zone Soil	MPNSPRSKDRRHWLRTLTWGFIAGVIAGLAMLLMMALLRLFLGWPTPTELIFDRLFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVIYAFYLKRRERRDVAQ
Ga0137370_103536622	3300012285	Vadose Zone Soil	MNQRHWLKTLIWGFIAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTAQVIVAG
Ga0137372_108210401	3300012350	Vadose Zone Soil	MPNSPRSKDRRHWLRTLTWGFIAGVMAGLAMLLMMALLRLFLGWPTPTELIFDRLFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVIYAFYLKRRERRDVAQTTGP
Ga0137371_103531911	3300012356	Vadose Zone Soil	MSNSSWLSSNLRDWLKTLTWGFCAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRLFPLLTVEFFISSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVIYAFYLKR
Ga0137360_102909833	3300012361	Vadose Zone Soil	MPIPSSLSSVKHWVKTLIWGFCAGVLAGLTMLLTMGLLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVLGALAGQVIVAGLG
Ga0137360_108014751	3300012361	Vadose Zone Soil	MKQILWLKTLIWGFIAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRVFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTAQMIVAGLGGVLYAFYLTHRDRRGGLGPVGN
Ga0137360_114897311	3300012361	Vadose Zone Soil	MPIPSSLSSVKHWVKTLIWGFCAGALAGLAMLLTMGLLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVMY
Ga0137361_102576711	3300012362	Vadose Zone Soil	MPIPSSLSSVKHWAKTLIWGFCAGVLAGLAMLLTMGLLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVI
Ga0137361_114115031	3300012362	Vadose Zone Soil	MPTPSSLSSVKHWVKTLIWGFCAGALAGLAMLLTMGLLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVMY
Ga0137358_101175871	3300012582	Vadose Zone Soil	MTNAPDSPPRRPFFSTLFLGLIAGVLAGLAMLLTMALLRSFLGWPTPTELIFDRLFPLLTVEFFIGSLVKAGGYTPLKLQGVFGALAGQVVVA
Ga0137358_107176271	3300012582	Vadose Zone Soil	MPTSSSRSTNHHHWLKTVIWGFIAGALAGLAMLLTMVLLRLFLGWPTPTELIFDRVFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTAQVI
Ga0137358_109552831	3300012582	Vadose Zone Soil	MPIPSSLSSVKHWVKTLIWGFCAGALAGLAMLLTMGLLRLFLGWPTPTELIFDRIFPQLTVEFFIGSLVRAGGYTPLKLQGVLGALAGQVI
Ga0136614_109351831	3300012684	Polar Desert Sand	MKDSATNGSERTPIFQALSWGLIAGILAGLAMLLTMALLRMFLGWPTPTELIFDRVFPLLTVEFFIASLARAGGYTPLKLQGVFGALAGQLI
Ga0137397_105445633	3300012685	Vadose Zone Soil	MPIPSSLSSVKHWVKTLIWGFCAGALAGLAMLLTMGLLRLFLGWPTPTELIFDRIFPQLTVEFFIGSLVRAGGYTPLKLQGVLGALAGQVIVAGLGG
Ga0137396_104881892	3300012918	Vadose Zone Soil	MKQILWLKTLIWGFISGVLAGLAMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTAQVIVAGLGGVLYAFYL
Ga0137394_107211232	3300012922	Vadose Zone Soil	MTNAPDSPPRRPFFSTLFWGLIAGVLAGLAMLLTMGLLRSFLGWPTPTELIFDRLFPLLTVEFFIGSLVKAGGYTPLKLQGVFGALAGQVVV
Ga0137359_104441983	3300012923	Vadose Zone Soil	MATSSSRSTNHHHWLKTVIWGFIAGALAGLAMLLTMALLRLFLGWPTPTELIFDRVFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALT
Ga0137413_113173741	3300012924	Vadose Zone Soil	MDRPHWIKTLIWGFIAGVLAGIAMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVIYAFYLRRRN
Ga0137419_117991102	3300012925	Vadose Zone Soil	MPTSSSRSTNHHHWLKTVIWGFIAGALAGLAMLLTMALLRLFLGWPTPTELIFDRVFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTAQVIVAGLGGVLYAFYLK
Ga0137407_122992822	3300012930	Vadose Zone Soil	MATSSSRSTNHHHWLKTVIWGFIAGALAGLAMLLTMALLRLFLGWPTPTELIFDRVFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTAQVIVAGLGGVLYAFYL
Ga0164300_111569951	3300012951	Soil	LIWSFFAGVLAGITMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQMIVAGLGGVIYA
Ga0164308_107275861	3300012985	Soil	LIWSFFAGVLAGITMLLTMALLRLFLGWPTPTELIFDRLFPKLTVEFFINSLVRAGGYTPLKLQGVFGALAGQLVVASLAGAAYAWYLARLDRRSAVVSNANRPVLDPR
Ga0164304_107127291	3300012986	Soil	LIWSFFAGVLAGITMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQMIVAGLGGVIYAFYLRRRGRRAA
Ga0157378_132567251	3300013297	Miscanthus Rhizosphere	MPNSSPRSADRRHWLRTLIWGFIAGALAGLAMLLMMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGL
Ga0137405_12208971	3300015053	Vadose Zone Soil	LPNTSPSSSDHRPHWLKTLACGLVAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRLFPLLTVEFFISSLVRAGGYTPLKLQGVFGVLAGQVIVAGLGGVIYA*
Ga0137418_107453822	3300015241	Vadose Zone Soil	MPIPSSLSSVKHWAKTLIWGFCAGVLAGLAMLLTMGLLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVLVAG
Ga0137409_111594171	3300015245	Vadose Zone Soil	MRSSLSFSSGQHWIKTLLWGFLTGVLAGIGMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVIYAFYQG
Ga0134069_12745922	3300017654	Grasslands Soil	MKQILWLKTLIWGFIAGVLAGLAMLLTMALLRLFFGWPTPTELIFDRVFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTAQVIVAGLGGVLYAFYLKHRDRRGGLRP
Ga0066662_130233322	3300018468	Grasslands Soil	MKQILWLKTLIWGFIAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGLFGALTAQVIVA
Ga0137408_11628561	3300019789	Vadose Zone Soil	MKQILWLKTLIWGFIAGVLAGLAMLLTMTLLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTAQVIVGDCRR
Ga0137408_11693841	3300019789	Vadose Zone Soil	MKQILWLKTLIWGFIAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTAQVIVAGL
Ga0137408_12258312	3300019789	Vadose Zone Soil	MKQILWLKTLIWGFIAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRVFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTAQVIVAGLGGVLYAFYLKH
Ga0179594_101509162	3300020170	Vadose Zone Soil	MKQILWLKTLIWGFIAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTAQVIVAGLGGILYAFYLKHRDRRGGLRPIGNLL
Ga0179596_102989681	3300021086	Vadose Zone Soil	MPNSSPPSKVRRHWLSTLICGFTAGVMAGLAMLLMMALLRVFLGWPTPTELIFDRLFPLLTVEFFISSLVRAGGYTPLKLQGVISALAGQVIVAGFGGVIYAFYLKRRDRRDVAQT
Ga0193695_10533751	3300021418	Soil	MSNVPDSSARRPLFSTLFWGLMAGLFAGLAMLLTMALLRILFGWPTPTELIFDRLFPLLTVEFFISSLVKAGGYTPLKLQGVFGALAGQI
Ga0207685_104826001	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MSESSRHSSGLQPWIKTLIVGSFAGALAGIAMLLTMALLRLFLGWPTPTELIFDRIFPLLSVEFFIGSLVRAGGYTPLKLQGVFA
Ga0207663_102770272	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSESSRHSLGLQPWIKTLIVGSFAGVLAGIAMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTGQVVVAGLGGVLYAFYLRSRDRR
Ga0207664_117369101	3300025929	Agricultural Soil	MPNTLPRSTDRPHWLKTLTWGFCAGVLAGLTMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVLYAFYLRRRVRRDRARS
Ga0209240_12585841	3300026304	Grasslands Soil	MKQILWLKTLIWGFISGVLAGLAMLLTMALLRLFLGWPTPTELIFDRVFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTAQVIVAGLGGVLYAFYLKHRDRRG
Ga0257147_10091273	3300026475	Soil	MPTSSSRSTNHHHWLKTVIWGFIAGALAGLAMLLTMALLRLFLGWPTPTELIFDRVFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTAQVI
Ga0257160_10753641	3300026489	Soil	MPDTLPRSTDRPHWLKTLTWGFCAGVMAGLIMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVLYAFYLRRRVGRDGARSAGTSLF
Ga0257153_10858341	3300026490	Soil	MPDTLPRSTDRSHWLKTLTWGFCAGVMAGLTMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGLG
Ga0257159_10631941	3300026494	Soil	MPIPSSLSSVKHWVKTLIWGFCAGALAGLAMLLTMGLLRLFLGWPTPTELIFDRIFPQLTVEFFIGSLVRAGGYTPLKLQGVLGALAGQVIVAGLGGVIYAFYLRRRDRRDG
Ga0209808_12096762	3300026523	Soil	MKQILWLKTLIWGFIAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTAQVIVAGLGGVLYAFYLKHRNRRVG
Ga0209690_11376802	3300026524	Soil	MPNSSPGSTDRRHWLRTFILGFIAGTLAGLAMLLMMALLRLFLGWPTPTELIFDRLFPLLTVEFFIGSLVRAGGYTPLKLQGVFAALAGQVIVA
Ga0209160_12400682	3300026532	Soil	MKQILWLKTLIWGFISGVLAGLAMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGVLTAQVIVAGL
Ga0209376_11372931	3300026540	Soil	MPDSSPHSKNWRHWLRTLTWGFTAGVMAGLAMLLMMAILRLFLGWPTPTELIFDRLFPLLTVEFFISSLVRAGGYTPLKLQGVFSALAGQVIVAGLGGVIYAFY
Ga0209376_14024271	3300026540	Soil	MKQILWLKTLIWGFIAGVLAGLAMLLTMALLRLFFGWPTPTELIFDRVFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTAQVIFAGLG
Ga0209161_101983371	3300026548	Soil	MKQILWLKTLIWGFIAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTAQVIVAGLGGVLYAFYL
Ga0209161_104237461	3300026548	Soil	MPNSSPRSTDRPHWLKTLTWGFCAGVLAGLTMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGAL
Ga0209648_106085931	3300026551	Grasslands Soil	MPNTLPRSTDRPHWLKTLTWGFCAGVLAGLTMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQLIVAGLGGVLYA
Ga0137415_106100061	3300028536	Vadose Zone Soil	MPIPSSLSSVKHWAKTLIWGFCAGVLAGLAMLLTMGLLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVMYAFYLRRRDRRDG
Ga0307290_101658432	3300028791	Soil	MPTSSSRSTNQHNWPKTVIWGFIAGALAGLAMLLTMALLRLFLAWPTPTELIFDRVFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALTGQMIVAGLGG
Ga0075404_114923301	3300030842	Soil	MPNTLPRSTDRPHWLKTLTWGFCAGVLAGLTMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVLYAFYL
Ga0075405_118807992	3300030847	Soil	MPNSSSRSKDLPHGLKTLTWGFSAGVLAGLTMLLTMALLRLFLGWPTPAELIFDRLFPLLTVEFFISSLVRAGGYTPLKLQGVFGALAGQVIVAGFGGVIYA
Ga0075386_120385671	3300030916	Soil	MNQGHWLKTLIWGFIAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGV
Ga0075371_118304771	3300030974	Soil	MPNTLPRSTDRPHWLKTLTWGFCAGVLAGLTMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAG
Ga0170822_135604761	3300031122	Forest Soil	MPNTLPRSTDRPHWLKTLTWGFCAGVLAGLTMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVLYAFHLRRRVR
Ga0170824_1123231392	3300031231	Forest Soil	LPNTSPSSSDHRPHWLKTLACGLIAGVLAGLAMLLTMALLRLFLGWPTPTELIFDRLFPLLTVDFFISSLVRAGGYTPLKLQGIFGALAGQVIVTGLGGVIYAFYLKRRDQRDGTQTRGT
Ga0170820_156760411	3300031446	Forest Soil	MPNSSSRSKDLPHGLKTLTWGFCAGVLAGLTMLLTMALLRLFLGWPTPTELIFDRLFPLLTVEFFISSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVIYAFYLK
Ga0170819_115980982	3300031469	Forest Soil	MPNALPGSTHRPHWLKTLTWGFCAGVLAGFTMLLTMALFRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTSLKLQGVFG
Ga0170819_143351101	3300031469	Forest Soil	MPNSSSRSKDLPHGLKTLTWGFCAGVLAGLTMLLTMALLRLFLGWPTPTELIFDRLFPLLTVEFFIGSLVRAGGYTPLKVQGVFGALAGQVIVAGLGGVIYAFYLKRRDRRDV
Ga0307471_1009219103	3300032180	Hardwood Forest Soil	MPNSSPRSTDRRHWLRTLIWGFIAGALAGLAMLLMMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKLQGVFGALAGQVIVAGLGGVLYAFY
Ga0307471_1028924521	3300032180	Hardwood Forest Soil	MSDSSRHSLGPQPWIKTLIVGSFAGVLAGIVMLLTMALLRLFLGWPTPTELIFDRIFPLLTVEFFIGSLVRAGGYTPLKL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098090

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences