Metagenome / Metatranscriptome Family F098145

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098145
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	45 residues
Representative Sequence	VIYLRKAKDEGYKELSAVKSDPSFAAALKDPAIQEVLAPKPPDSTQP
Number of Associated Samples	89
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.88 %
% of genes near scaffold ends (potentially truncated)	96.15 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (27.885 % of family members)
Environment Ontology (ENVO)	Unclassified (27.885 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.67% β-sheet: 0.00% Coil/Unstructured: 61.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF13432	TPR_16	8.65
PF01145	Band_7	3.85
PF07508	Recombinase	2.88
PF13414	TPR_11	1.92
PF05016	ParE_toxin	0.96
PF14559	TPR_19	0.96
PF13431	TPR_17	0.96
PF01957	NfeD	0.96
PF12704	MacB_PCD	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	2.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	93.27 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	30.77 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	12.50 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium 13_1_20CM_3_58_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	28.85 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	10.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium 13_1_20CM_3_58_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	28.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium 13_1_20CM_3_58_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	28.85 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10024845	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4856	Open in IMG/M
3300004092\|Ga0062389_102004623	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	755	Open in IMG/M
3300005172\|Ga0066683_10714956	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	592	Open in IMG/M
3300005175\|Ga0066673_10590013	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	647	Open in IMG/M
3300005176\|Ga0066679_10167854	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1384	Open in IMG/M
3300005177\|Ga0066690_10847719	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	589	Open in IMG/M
3300005454\|Ga0066687_10016006	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3039	Open in IMG/M
3300005454\|Ga0066687_10279254	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	940	Open in IMG/M
3300005552\|Ga0066701_10011875	All Organisms → cellular organisms → Bacteria → Acidobacteria	4023	Open in IMG/M
3300005875\|Ga0075293_1070729	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	523	Open in IMG/M
3300006163\|Ga0070715_10129334	All Organisms → cellular organisms → Bacteria → Acidobacteria	1213	Open in IMG/M
3300006755\|Ga0079222_10859595	All Organisms → cellular organisms → Bacteria → Acidobacteria	753	Open in IMG/M
3300006797\|Ga0066659_11135114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	653	Open in IMG/M
3300006800\|Ga0066660_11614919	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	514	Open in IMG/M
3300006903\|Ga0075426_11048441	All Organisms → cellular organisms → Bacteria → Acidobacteria	617	Open in IMG/M
3300006954\|Ga0079219_10656951	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	784	Open in IMG/M
3300007255\|Ga0099791_10062104	All Organisms → cellular organisms → Bacteria → Acidobacteria	1683	Open in IMG/M
3300009522\|Ga0116218_1394053	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300010048\|Ga0126373_11295370	All Organisms → cellular organisms → Bacteria → Acidobacteria	795	Open in IMG/M
3300010048\|Ga0126373_12839715	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300010322\|Ga0134084_10253488	All Organisms → cellular organisms → Bacteria → Acidobacteria	636	Open in IMG/M
3300010337\|Ga0134062_10115106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	1167	Open in IMG/M
3300010376\|Ga0126381_100782506	All Organisms → cellular organisms → Bacteria → Acidobacteria	1369	Open in IMG/M
3300011271\|Ga0137393_10560424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	980	Open in IMG/M
3300011271\|Ga0137393_11617210	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300012189\|Ga0137388_10026150	All Organisms → cellular organisms → Bacteria → Acidobacteria	4475	Open in IMG/M
3300012189\|Ga0137388_11598644	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300012202\|Ga0137363_10870513	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300012203\|Ga0137399_10489543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	1031	Open in IMG/M
3300012203\|Ga0137399_11070032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	679	Open in IMG/M
3300012203\|Ga0137399_11731400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	513	Open in IMG/M
3300012203\|Ga0137399_11806493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	500	Open in IMG/M
3300012206\|Ga0137380_10249390	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1601	Open in IMG/M
3300012209\|Ga0137379_11229531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	656	Open in IMG/M
3300012351\|Ga0137386_10379327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	1018	Open in IMG/M
3300012361\|Ga0137360_11295005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	629	Open in IMG/M
3300012918\|Ga0137396_10486471	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	915	Open in IMG/M
3300012922\|Ga0137394_10722918	All Organisms → cellular organisms → Bacteria → Acidobacteria	837	Open in IMG/M
3300012923\|Ga0137359_11346952	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300012925\|Ga0137419_11809213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	523	Open in IMG/M
3300012971\|Ga0126369_11876898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300012971\|Ga0126369_12473424	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300012975\|Ga0134110_10173691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	897	Open in IMG/M
3300014157\|Ga0134078_10272648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	718	Open in IMG/M
3300015054\|Ga0137420_1102878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	833	Open in IMG/M
3300015054\|Ga0137420_1452668	All Organisms → cellular organisms → Bacteria → Acidobacteria	2360	Open in IMG/M
3300015054\|Ga0137420_1462185	All Organisms → cellular organisms → Bacteria → Acidobacteria	1430	Open in IMG/M
3300015241\|Ga0137418_10160839	All Organisms → cellular organisms → Bacteria → Acidobacteria	1971	Open in IMG/M
3300015245\|Ga0137409_11382907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	548	Open in IMG/M
3300015264\|Ga0137403_10455379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	1154	Open in IMG/M
3300016270\|Ga0182036_10690152	All Organisms → cellular organisms → Bacteria → Acidobacteria	825	Open in IMG/M
3300016294\|Ga0182041_11315580	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300016404\|Ga0182037_10424448	All Organisms → cellular organisms → Bacteria → Acidobacteria	1100	Open in IMG/M
3300016404\|Ga0182037_11809542	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300016404\|Ga0182037_11820351	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300017947\|Ga0187785_10743385	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300017961\|Ga0187778_10953237	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300017973\|Ga0187780_10012821	All Organisms → cellular organisms → Bacteria → Acidobacteria	6151	Open in IMG/M
3300018085\|Ga0187772_10361351	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1005	Open in IMG/M
3300018468\|Ga0066662_12569891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	537	Open in IMG/M
3300020006\|Ga0193735_1084111	All Organisms → cellular organisms → Bacteria → Acidobacteria	906	Open in IMG/M
3300020579\|Ga0210407_10568910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	884	Open in IMG/M
3300020580\|Ga0210403_10693947	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300021086\|Ga0179596_10228833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	913	Open in IMG/M
3300021168\|Ga0210406_10776375	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300021170\|Ga0210400_11045972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	662	Open in IMG/M
3300021559\|Ga0210409_10351390	All Organisms → cellular organisms → Bacteria → Acidobacteria	1324	Open in IMG/M
3300021855\|Ga0213854_1034560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	563	Open in IMG/M
3300025905\|Ga0207685_10036922	All Organisms → cellular organisms → Bacteria	1795	Open in IMG/M
3300025916\|Ga0207663_10788478	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300026314\|Ga0209268_1078312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	973	Open in IMG/M
3300026317\|Ga0209154_1062967	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1629	Open in IMG/M
3300026322\|Ga0209687_1173863	All Organisms → cellular organisms → Bacteria → Acidobacteria	678	Open in IMG/M
3300026342\|Ga0209057_1011996	All Organisms → cellular organisms → Bacteria → Acidobacteria	5317	Open in IMG/M
3300026376\|Ga0257167_1044344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	678	Open in IMG/M
3300026557\|Ga0179587_10106625	All Organisms → cellular organisms → Bacteria → Acidobacteria	1702	Open in IMG/M
3300026887\|Ga0207805_1012345	All Organisms → cellular organisms → Bacteria → Acidobacteria	905	Open in IMG/M
3300026898\|Ga0207788_1014116	All Organisms → cellular organisms → Bacteria → Acidobacteria	714	Open in IMG/M
3300027605\|Ga0209329_1141245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	530	Open in IMG/M
3300027643\|Ga0209076_1060158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	1078	Open in IMG/M
3300027846\|Ga0209180_10672022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	566	Open in IMG/M
3300027875\|Ga0209283_10241310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	1199	Open in IMG/M
3300031549\|Ga0318571_10186138	All Organisms → cellular organisms → Bacteria → Acidobacteria	736	Open in IMG/M
3300031680\|Ga0318574_10297832	All Organisms → cellular organisms → Bacteria → Acidobacteria	937	Open in IMG/M
3300031682\|Ga0318560_10249198	All Organisms → cellular organisms → Bacteria → Acidobacteria	953	Open in IMG/M
3300031719\|Ga0306917_10486394	All Organisms → cellular organisms → Bacteria → Acidobacteria	968	Open in IMG/M
3300031720\|Ga0307469_10932665	All Organisms → cellular organisms → Bacteria → Acidobacteria	806	Open in IMG/M
3300031777\|Ga0318543_10233662	All Organisms → cellular organisms → Bacteria → Acidobacteria	819	Open in IMG/M
3300031796\|Ga0318576_10200842	All Organisms → cellular organisms → Bacteria → Acidobacteria	937	Open in IMG/M
3300031820\|Ga0307473_10074884	All Organisms → cellular organisms → Bacteria	1713	Open in IMG/M
3300031820\|Ga0307473_10647759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_58_11	735	Open in IMG/M
3300031890\|Ga0306925_12235572	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300031910\|Ga0306923_11279134	All Organisms → cellular organisms → Bacteria → Acidobacteria	779	Open in IMG/M
3300031942\|Ga0310916_10628127	All Organisms → cellular organisms → Bacteria → Acidobacteria	912	Open in IMG/M
3300031945\|Ga0310913_10125205	All Organisms → cellular organisms → Bacteria → Acidobacteria	1758	Open in IMG/M
3300031946\|Ga0310910_10237566	All Organisms → cellular organisms → Bacteria → Acidobacteria	1422	Open in IMG/M
3300031946\|Ga0310910_10442402	All Organisms → cellular organisms → Bacteria → Acidobacteria	1031	Open in IMG/M
3300031947\|Ga0310909_10604308	All Organisms → cellular organisms → Bacteria → Acidobacteria	916	Open in IMG/M
3300031954\|Ga0306926_10835610	All Organisms → cellular organisms → Bacteria → Acidobacteria	1108	Open in IMG/M
3300031954\|Ga0306926_11169957	All Organisms → cellular organisms → Bacteria → Acidobacteria	905	Open in IMG/M
3300032160\|Ga0311301_10325454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2433	Open in IMG/M
3300032205\|Ga0307472_102386820	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300033158\|Ga0335077_10631332	All Organisms → cellular organisms → Bacteria → Acidobacteria	1113	Open in IMG/M
3300033290\|Ga0318519_10224862	All Organisms → cellular organisms → Bacteria → Acidobacteria	1078	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.04%
Host-Associated	Host-Associated	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.12%
Aquatic	Environmental → Aquatic	1.92%
Plants	Host-Associated → Plants	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.12%
Freshwater	Environmental → Aquatic → Freshwater	1.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.65%
Loam	Environmental → Terrestrial → Soil → Loam	7.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.77%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	27.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.92%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.96%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005875	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021855	Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_18 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026887	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 49 (SPAdes)	Environmental	Open in IMG/M
3300026898	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 79 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_100248455	3300001593	Forest Soil	KDEGYKELSAVKSDPSFAAVLKDPAIQEVLAPKPSDSTQP*
Ga0062389_1020046231	3300004092	Bog Forest Soil	LERCVIYLRKAKDEGYKELAQAKTDPSFAAVLQDPAIQEVLAPKPREAEQP*
Ga0066683_107149561	3300005172	Soil	RKAKDEGYKELSAVKSDPSFAAVLKDPAVQEVLASKPLDSTQP*
Ga0066673_105900131	3300005175	Soil	GNLDRCLVYLRKAKDEGYKELAAIKMDPSFAAVIQNPAIQEILAPRPEDNPQI*
Ga0066679_101678541	3300005176	Soil	LIYLRKAKDEGYKELSAVKSDPSFAAVLKDPAIQEVLAPRPPNSTQP*
Ga0066690_108477191	3300005177	Soil	LRKAKDEGYKELSAVKSDPSFAAVLKDPGIQEVIAPRPPSSTQP*
Ga0066687_100160061	3300005454	Soil	RKAKDEGYKELAAIKADPSFAAVLKDPAIQELLAPKPDTTEP*
Ga0066687_102792542	3300005454	Soil	LIYLRKAKDEGYKELAAIKMDPSFAAVLKDPAVQEILAPRPADNPQL*
Ga0066701_100118751	3300005552	Soil	KAKDEGYKELSAVKSDPSFAAVLKDPAIQEVLAPRPPNSTQP*
Ga0075293_10707292	3300005875	Rice Paddy Soil	YLRKAKDEGYKELSAVKTDPSFAAVLKDPGIQEVLAPKPPDSPQP*
Ga0070715_101293341	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VERCVIYLKKAKDEGYKDYATAKTDPSFAAVLKDPAIQEVLAAKPEETVQP*
Ga0079222_108595951	3300006755	Agricultural Soil	QLAAIKEDPSFAAVIKNPAIQEVLTPRPEDTPQI*
Ga0066659_111351141	3300006797	Soil	DEGYKELSAVKSDPSFAAVLKDPAVQEVIAPRPPSSPQP*
Ga0066660_116149191	3300006800	Soil	EGYKELSAVKSDPSFAAVLKDPAVQEVIAPRPPSSPQP*
Ga0075426_110484411	3300006903	Populus Rhizosphere	EGYKQLAAIKEDPSFAVVIKNPAIQEVLAPRPEDTPQI*
Ga0079219_106569511	3300006954	Agricultural Soil	GNLDRCLIYLRKAKDEGYKQLAAIKEDPSFAAVIKNPAIQEVLTPRPEDTPQI*
Ga0099791_100621042	3300007255	Vadose Zone Soil	ERCLIYLRKAKDEGYKELSAVRSDPSFAAVLKDPGIQEVLAPKVLDSTQP*
Ga0116218_13940531	3300009522	Peatlands Soil	LDRCVIYLRKARDEGYKDMDAAKSDPAFASVLKDPAIQEILFPAPAQTAQP*
Ga0126373_112953702	3300010048	Tropical Forest Soil	GNVERCLIYLRKAKDEGYKELAAIKSDPSFALVMKDPGVQEVLAPKPADAPQL*
Ga0126373_128397151	3300010048	Tropical Forest Soil	KDLNTVKSDPAFASVLTNPAIQEIIAPKPVEAAEP*
Ga0134084_102534881	3300010322	Grasslands Soil	KAKDEGYKQLAAIKMDPSFAAVLKDPAIQEVLAPKPTDSTQP*
Ga0134062_101151062	3300010337	Grasslands Soil	CLIYLRKAKDEGYKELSAVKSDPSFAAALKDPAIQEVLAPKPPDSTQP*
Ga0126381_1007825062	3300010376	Tropical Forest Soil	AKDEGYKDYATAKNDPSFAAILKDPAIQEVLASKPEETVQP*
Ga0137393_105604241	3300011271	Vadose Zone Soil	DEGYKELSSAKSDPSFAAILKDPAIQEVLAPKPPDGTQP*
Ga0137393_116172101	3300011271	Vadose Zone Soil	IVYLRKAKDEGYKELAEIAKDPAFAAVLKDPAIQELLAPKPAESAQP*
Ga0137388_100261501	3300012189	Vadose Zone Soil	IVYLRKAKDEGYKELAEIKKDPAFAAVLKDPAIQEVLAPKPAESAQP*
Ga0137388_115986442	3300012189	Vadose Zone Soil	IVYLRKAKDEGYKELAEIKKDPAFAAVLKDPAIQEVLAPKPVESAQP*
Ga0137363_108705132	3300012202	Vadose Zone Soil	NLERCLIYLRKAKDEGYKELNAAKFDPAFAAVLKDPAIQEVFATKPQ*
Ga0137399_104895432	3300012203	Vadose Zone Soil	KAKDEGYKELSAVKSDPSFAAALKDPAIQELLAPKPPDSTQP*
Ga0137399_110700322	3300012203	Vadose Zone Soil	EGYKELSAVKSDPSFAAVLKDPAIQEVLAPKPPDGTQP*
Ga0137399_117314001	3300012203	Vadose Zone Soil	KDEGYKELSTVKSDPSFSAVLNDPAVQEVLAPKPPDSTQP*
Ga0137399_118064931	3300012203	Vadose Zone Soil	ELSAVKSDPSFAAALKDPAIQEVLAPKSPGSTQP*
Ga0137380_102493902	3300012206	Vadose Zone Soil	VIYLRKAKDEGYKELSAVKSYPSFAAVLKDPAIQEVLAPKPPDSTQP*
Ga0137379_112295312	3300012209	Vadose Zone Soil	VIYLRKAKDEGYKELSAVKSDPSFAAVLKDPAVQEVLAPKPLDSTQP*
Ga0137386_103793272	3300012351	Vadose Zone Soil	EGYKELSAVKSDPSFAAALKDPAIQEVLAPKPRDSTQP*
Ga0137360_112950051	3300012361	Vadose Zone Soil	DEGYKDLSAVKSDPSFAAFLKDPGIQEVLAPKPHDSTLP*
Ga0137396_104864711	3300012918	Vadose Zone Soil	DEGYKELSAVKSDPSFAAALKDPAIQELLAPKPPDSTQP*
Ga0137394_107229182	3300012922	Vadose Zone Soil	KAKDEGYKELNAAKFDPAFAAVLKDPAIQEVFATKPQ*
Ga0137359_113469521	3300012923	Vadose Zone Soil	LRKAKDEGYKELNAAKSDPAFAAVLKDPAIQEVFVTKPK*
Ga0137419_118092132	3300012925	Vadose Zone Soil	ERCLIYLRKAKDEGYKELSAVKSDPSFAAALKDPAIQELLAPKPPDSTQP*
Ga0126369_118768981	3300012971	Tropical Forest Soil	GYKELAAIKTDPSFAIVLKDPGVQEVLAPKPADAPQL*
Ga0126369_124734241	3300012971	Tropical Forest Soil	CLIYLRKAKDEGYKQLAAIKEDPSFAAVIKNPAIQEVLAPRPEDTPQI*
Ga0134110_101736912	3300012975	Grasslands Soil	CLIYLRKAKDEGYKELSAVKTDPSFAAALKDPAMQEVLTPKSPGGTQP*
Ga0134078_102726481	3300014157	Grasslands Soil	LIYLRKAKDEGYKELSAVKTDPSFAAALKDPAMQEVLTPKSPGSTQP*
Ga0137420_11028782	3300015054	Vadose Zone Soil	NVERCLIYLRKAKDEGYKELSSVKSDISFAAVLKDPGIQEVLAPKPPASTQP*
Ga0137420_14526685	3300015054	Vadose Zone Soil	VIYLRKAKDEGYKDLSAVKSDPSFAAVLKDPAIQEVIATKPLDSTQP*
Ga0137420_14621852	3300015054	Vadose Zone Soil	RCVIYLRKAKDEGYKELSTVKSDPSFSAVLNDPAVQEVLAPKPPDSTQP*
Ga0137418_101608392	3300015241	Vadose Zone Soil	YLRKAKDEGYKELNAEKSDPAFAAVLKDPAIQEVFATKPQ*
Ga0137409_113829072	3300015245	Vadose Zone Soil	YKELSTVKSDPSFSAVLNDPAVQEVLAPKPPDSTQP*
Ga0137403_104553792	3300015264	Vadose Zone Soil	LVYLRKAKDEGYKDLSAVKSDPSFAAFLKDPGIQEVLAPKPHDSTLP*
Ga0182036_106901522	3300016270	Soil	IYLRKAKDEGYKDLNTVKSDPAFASVLTDPAIQEIIAPKPVEAAQP
Ga0182041_113155802	3300016294	Soil	LIYLRKAKDEGYKELAAIKMDPSVAAVIKDPAIQEILAPRPEDTPQI
Ga0182037_104244482	3300016404	Soil	KSFAQAGNVERCAIYLRKAKDEGYKDLNTVKSDPAFASVLTNPAIQEIIAPKPVEAAEP
Ga0182037_118095422	3300016404	Soil	IYLRKAKDEGYKDLNTVKSDPAFASVLTDPAIQEIIAPKPVEEAQP
Ga0182037_118203511	3300016404	Soil	AGNVERCVIYLRKAKDEGYKDLNTVKSDPAFASVLTDPAIQEILAPKPVEAAQP
Ga0187785_107433851	3300017947	Tropical Peatland	KAKDEGYADMNAVKTDPSFAAAMKDPSMQEILAPKPAESAQP
Ga0187778_109532372	3300017961	Tropical Peatland	ERCLIYLRKAKDEGYKDMNAVKTDPSFAAVLKDPAIQEVLAPKPPDNAQP
Ga0187780_100128216	3300017973	Tropical Peatland	YLRKAKDEGYKDLNAVKTDPSFAAVLKDPAIQEVLAPTKPPDNAQP
Ga0187772_103613513	3300018085	Tropical Peatland	YLRKAKDEGYKEMNSIKTDPSFAAVLKDPAIQEVLAPKTPDNAQP
Ga0066662_125698911	3300018468	Grasslands Soil	KAKDEGYKELSAVKSDPSFAAVLKSPEVQEVLAPKPPDAQP
Ga0193735_10841111	3300020006	Soil	VIYLRKAKDEGYKELSAVKSDPSFAAALKDPAIQEVLAPKPPDSTQP
Ga0210407_105689102	3300020579	Soil	RCLIYLRKAKDEGYKDLSAVKSDPSFAAFLKDPGIQEVLAPKPRDSTLP
Ga0210403_106939471	3300020580	Soil	GNVERCVIYLKKAKDEGYKDYATAKTDPSFAAVLKDPAIQEVLAAKPEETVQP
Ga0179596_102288332	3300021086	Vadose Zone Soil	EGYKELSGVKTDPSFAAVLKDPAIQEVLAPKPPDTTQP
Ga0210406_107763752	3300021168	Soil	DEGYKDYATAKTDPSFAAVLKDPAIQEVLAAKPEETVQP
Ga0210400_110459721	3300021170	Soil	TQLAAAKSDPAFAAVLKEPGIQEILAPKPPDTHQP
Ga0210409_103513901	3300021559	Soil	LERCLIYLRKAKDEGYKELEAVKTDPSFAAFMKDPGIQEVLAPKPADAPR
Ga0213854_10345602	3300021855	Watersheds	FKELSDVKTDPSFAAFLKDPGIQEVLAPKPPDATQP
Ga0207685_100369221	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	EGYKDYATAKTDPSFAAVLKDPAIQEVLAAKPEETVQP
Ga0207663_107884781	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	NVERCVIYLKKAKDEGYKDYATAKTDPSFAAVLKDPAIQEVLASRPEEMVQP
Ga0209268_10783122	3300026314	Soil	CLIYLRKAKDEGYKELSAVKSDPSFAAALKDPAIQEVLAPKPPDSTQP
Ga0209154_10629673	3300026317	Soil	AGNLERCLIYLRKAKDEGYKQMAAIKQDPSFAAVLKDPAIQEVLAPRPEDNPQL
Ga0209687_11738632	3300026322	Soil	LRKAKDEGYKELAAIKADPSFAAVLKDPAIQELLAPKPDTTEP
Ga0209057_10119964	3300026342	Soil	ERCLIYLRKAKDEGYKQLAAIKEDPSFAAVIKSPAVQEVLTPRPEDNPQI
Ga0257167_10443442	3300026376	Soil	CLIYLRKAKDEGYKELSSVRSDISFAAVLKDPGIQEVLAPKPPASTQP
Ga0179587_101066252	3300026557	Vadose Zone Soil	GYKELSSVKSDISFAAVLKDPAIQEVLAPKPPASTQP
Ga0207805_10123452	3300026887	Tropical Forest Soil	DEGYKDLNTVKSDPAFASVLADPAIQEIIAPKPVEAAQP
Ga0207788_10141161	3300026898	Tropical Forest Soil	CVIYLRKAKDEGYKDLNTVKSDPAFASVLADPAIQEIIAPKPVEAAQP
Ga0209329_11412451	3300027605	Forest Soil	GNLERCLIYLRKAKDEGYKELSAVKTDPSFAAALKDPAIQEVLAPKPPDSTQP
Ga0209076_10601582	3300027643	Vadose Zone Soil	YKDLSAVKSDPSFAAVLKDPTVQEVIAPKPPDSTQP
Ga0209180_106720222	3300027846	Vadose Zone Soil	YKELSAVRSDPSFAAVLKDPGVQEVLAPKVLDGTQP
Ga0209283_102413101	3300027875	Vadose Zone Soil	KAKDEGYKELSSAKSDPSFAAILKDPAIQEVLAPKPPDGTQP
Ga0318571_101861382	3300031549	Soil	DEGYKDLNTVKSDPAFASVLTNPAIQEIIAPKPVEAAEP
Ga0318574_102978322	3300031680	Soil	VERCAIYLRKAKDEGYKDLNTVKSDPAFASVLTNPAIQEIIAPKPVEAAEP
Ga0318560_102491981	3300031682	Soil	SGNVERCVIYLRKAKDEGYKDLNTVKSDPAFASVLTDPAIQEIIAPKPVEAAQP
Ga0306917_104863941	3300031719	Soil	YLRKAKDEGYKDLNTVKSDPAFASVLTDPAIQEIIAPKPVEEVQP
Ga0307469_109326651	3300031720	Hardwood Forest Soil	ERCLIYLRKAKDEGYKELNAAKSDPAFSAVLKDPAVQEIFVTKPE
Ga0318543_102336622	3300031777	Soil	LRKAKDEGYKDLNTVKSDPAFASVLTNPAIQEIIAPKPVEAAEP
Ga0318576_102008422	3300031796	Soil	GYKDLNTVKSDPAFASVLTNPAIQEIIAPKPVEANEP
Ga0307473_100748842	3300031820	Hardwood Forest Soil	YLKKAKDEGYKDYATAKTDPSFAAVLKDPAIQEVLASKPEETVQP
Ga0307473_106477591	3300031820	Hardwood Forest Soil	AKDEGFKELSAAKFDPSFAAILKEPAIQEVLSLKASDGAPH
Ga0306925_122355721	3300031890	Soil	GNVERCAIYLRKAKDEGYKDLNTVKSDPAFASVLTNPAIQEIIAPKPVEAAEP
Ga0306923_112791341	3300031910	Soil	QSGNVERCVIYLRKAKDEGYKDLNTVKSDPAFASVLTDPAIQEIIAPKPVEAAQP
Ga0310916_106281272	3300031942	Soil	DEGYKDLNTVKSDPAFASVLTDPAIQEILAPKPVEAAQP
Ga0310913_101252052	3300031945	Soil	YKDLNTVKSDPAFASVLTDPAIQEIIAPKPVEAAQP
Ga0310910_102375661	3300031946	Soil	SFAQSGNVERCVIYLRKAKDEGYKDLNTVKSDPAFASVLTDPAIQEIIAPKPVEEVQP
Ga0310910_104424021	3300031946	Soil	SFAQSGNVERCVIYLRKAKDEGYKDLNTVKSDPAFASVLTDPAIQEIIAPKPVEAAQP
Ga0310909_106043082	3300031947	Soil	CVIYLRKAKDEGYKDLNTVKSDPAFASVLTDPAIQEIIAPKPVEAAQP
Ga0306926_108356102	3300031954	Soil	RCAIYLRKAKDEGYKDLNTVKSDPAFASVLTNPAIQEIIAPKPVEAAEP
Ga0306926_111699572	3300031954	Soil	GNVERCVIYLRKAKDEGYKDLNTVKSDPAFASVLTDPAIQEIIAPKPVEAAQP
Ga0311301_103254541	3300032160	Peatlands Soil	RCVLYLKKARDEGYKDYAAAKTDPSFAAMLKDPAFQEVLASKPPETAQP
Ga0307472_1023868201	3300032205	Hardwood Forest Soil	KDEGYKQLAAIKEDPSFAAVIKNPAIQEVLAPRPEDTPQI
Ga0335077_106313321	3300033158	Soil	KKAKDEGYKDYTAAKTDPSFAAVLKDPAIQEVLASKPEETVQP
Ga0318519_102248622	3300033290	Soil	IYLRKAKDEGYKDLNTVKSDPAFASVLTNPAIQEIIAPKPVEAAEP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098145

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences