Metagenome / Metatranscriptome Family F098146

Basic Information
Family ID	F098146
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	50 residues
Representative Sequence	MPNDNNRVLTRRGARQLSQDEIEQTAGAGATLLSVIVTNTAGNPDQRLDS
Number of Associated Samples	74
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	92.31 %
% of genes near scaffold ends (potentially truncated)	11.54 %
% of genes from short scaffolds (< 2000 bps)	80.77 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Most Common Taxonomy
Group	Unclassified (79.808 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (26.923 % of family members)
Environment Ontology (ENVO)	Unclassified (38.462 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.808 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.10% β-sheet: 10.26% Coil/Unstructured: 75.64%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00025	Arf	4.81
PF10431	ClpB_D2-small	3.85
PF03738	GSP_synth	0.96
PF01063	Aminotran_4	0.96
PF13519	VWA_2	0.96
PF05164	ZapA	0.96
PF13200	DUF4015	0.96
PF00238	Ribosomal_L14	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1100	GTPase SAR1 family domain	General function prediction only [R]	4.81
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	1.92
COG0093	Ribosomal protein L14	Translation, ribosomal structure and biogenesis [J]	0.96
COG0754	Glutathionylspermidine synthase, CHAP domain	Amino acid transport and metabolism [E]	0.96
COG3027	Cell division protein ZapA, inhibits GTPase activity of FtsZ	Cell cycle control, cell division, chromosome partitioning [D]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.81 %
All Organisms	root	All Organisms	20.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.81 %
cellular organisms	root	All Organisms → cellular organisms	20.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.81 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	20.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	18.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.81 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	15.38 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.81 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	10.58 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.81 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	10.58 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.81 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	10.58 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.81 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	10.58 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459013\|GO6OHWN02I01XA	Not Available	520	Open in IMG/M
2199352024\|deeps_contig13596.9018	Not Available	699	Open in IMG/M
3300003321\|soilH1_10154086	Not Available	1634	Open in IMG/M
3300003571\|Ga0007419J51692_1097792	Not Available	514	Open in IMG/M
3300004479\|Ga0062595_100650139	Not Available	834	Open in IMG/M
3300004799\|Ga0058863_11892290	Not Available	613	Open in IMG/M
3300004800\|Ga0058861_10167818	Not Available	590	Open in IMG/M
3300004800\|Ga0058861_11942440	Not Available	897	Open in IMG/M
3300004800\|Ga0058861_11954636	Not Available	870	Open in IMG/M
3300004803\|Ga0058862_10215731	Not Available	639	Open in IMG/M
3300005434\|Ga0070709_10010433	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	5147	Open in IMG/M
3300005434\|Ga0070709_10042530	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	2806	Open in IMG/M
3300005434\|Ga0070709_10059204	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	2431	Open in IMG/M
3300005434\|Ga0070709_10897485	Not Available	701	Open in IMG/M
3300005435\|Ga0070714_100603067	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1055	Open in IMG/M
3300005435\|Ga0070714_100841484	Not Available	890	Open in IMG/M
3300005435\|Ga0070714_101186808	Not Available	744	Open in IMG/M
3300005436\|Ga0070713_100054386	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	3321	Open in IMG/M
3300005436\|Ga0070713_100448309	Not Available	1212	Open in IMG/M
3300005436\|Ga0070713_100518002	Not Available	1127	Open in IMG/M
3300005437\|Ga0070710_10267735	Not Available	1104	Open in IMG/M
3300005437\|Ga0070710_10336917	Not Available	995	Open in IMG/M
3300005439\|Ga0070711_100020723	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4241	Open in IMG/M
3300005458\|Ga0070681_10643541	Not Available	975	Open in IMG/M
3300005526\|Ga0073909_10053559	Not Available	1473	Open in IMG/M
3300005530\|Ga0070679_100266567	Not Available	1668	Open in IMG/M
3300005533\|Ga0070734_10002034	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	26450	Open in IMG/M
3300005537\|Ga0070730_10086483	Not Available	2189	Open in IMG/M
3300005542\|Ga0070732_10052100	Not Available	2366	Open in IMG/M
3300005542\|Ga0070732_10089591	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1805	Open in IMG/M
3300005542\|Ga0070732_10325119	Not Available	924	Open in IMG/M
3300005547\|Ga0070693_100915868	Not Available	658	Open in IMG/M
3300005563\|Ga0068855_102381425	Not Available	529	Open in IMG/M
3300005614\|Ga0068856_101445264	Not Available	702	Open in IMG/M
3300005764\|Ga0066903_108954709	Not Available	507	Open in IMG/M
3300006028\|Ga0070717_10121300	Not Available	2240	Open in IMG/M
3300006028\|Ga0070717_10378838	Not Available	1268	Open in IMG/M
3300006028\|Ga0070717_10428409	Not Available	1190	Open in IMG/M
3300006028\|Ga0070717_10746829	Not Available	889	Open in IMG/M
3300006163\|Ga0070715_10122214	Not Available	1243	Open in IMG/M
3300006173\|Ga0070716_100897250	Not Available	694	Open in IMG/M
3300006175\|Ga0070712_101656066	Not Available	560	Open in IMG/M
3300006755\|Ga0079222_10192787	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1216	Open in IMG/M
3300006755\|Ga0079222_10928118	Not Available	735	Open in IMG/M
3300006806\|Ga0079220_10978424	Not Available	668	Open in IMG/M
3300006806\|Ga0079220_11330450	Not Available	604	Open in IMG/M
3300006954\|Ga0079219_11172115	Not Available	661	Open in IMG/M
3300009093\|Ga0105240_12376184	Not Available	549	Open in IMG/M
3300009098\|Ga0105245_10027133	All Organisms → cellular organisms → Bacteria	5045	Open in IMG/M
3300009098\|Ga0105245_10054369	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	3596	Open in IMG/M
3300009551\|Ga0105238_10287133	Not Available	1627	Open in IMG/M
3300010358\|Ga0126370_10162193	Not Available	1644	Open in IMG/M
3300010373\|Ga0134128_10101026	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	3280	Open in IMG/M
3300010376\|Ga0126381_100213981	Not Available	2586	Open in IMG/M
3300010397\|Ga0134124_11887871	Not Available	633	Open in IMG/M
3300010397\|Ga0134124_11997101	Not Available	617	Open in IMG/M
3300010398\|Ga0126383_10021754	All Organisms → cellular organisms → Bacteria → Acidobacteria	4930	Open in IMG/M
3300011120\|Ga0150983_12897141	Not Available	1061	Open in IMG/M
3300012955\|Ga0164298_10731411	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	698	Open in IMG/M
3300012957\|Ga0164303_10550143	Not Available	749	Open in IMG/M
3300012960\|Ga0164301_10313928	Not Available	1061	Open in IMG/M
3300012984\|Ga0164309_10932052	Not Available	710	Open in IMG/M
3300012986\|Ga0164304_11787768	Not Available	514	Open in IMG/M
3300012987\|Ga0164307_10045436	Not Available	2487	Open in IMG/M
3300012988\|Ga0164306_10272096	Not Available	1224	Open in IMG/M
3300013306\|Ga0163162_11192368	Not Available	864	Open in IMG/M
3300017936\|Ga0187821_10349215	Not Available	596	Open in IMG/M
3300020070\|Ga0206356_10069856	Not Available	1043	Open in IMG/M
3300020070\|Ga0206356_11906538	Not Available	576	Open in IMG/M
3300020077\|Ga0206351_10358498	Not Available	876	Open in IMG/M
3300020078\|Ga0206352_11000315	Not Available	667	Open in IMG/M
3300020080\|Ga0206350_11567414	Not Available	1070	Open in IMG/M
3300021560\|Ga0126371_10220772	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1999	Open in IMG/M
3300021560\|Ga0126371_12270835	Not Available	655	Open in IMG/M
3300025898\|Ga0207692_10408738	Not Available	848	Open in IMG/M
3300025905\|Ga0207685_10076657	Not Available	1371	Open in IMG/M
3300025912\|Ga0207707_10116632	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	2333	Open in IMG/M
3300025912\|Ga0207707_10564602	Not Available	966	Open in IMG/M
3300025915\|Ga0207693_10077503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2603	Open in IMG/M
3300025915\|Ga0207693_10636231	Not Available	829	Open in IMG/M
3300025916\|Ga0207663_10928385	Not Available	696	Open in IMG/M
3300025924\|Ga0207694_10902776	Not Available	747	Open in IMG/M
3300025927\|Ga0207687_10019755	All Organisms → cellular organisms → Bacteria → Acidobacteria	4465	Open in IMG/M
3300025928\|Ga0207700_10002894	All Organisms → cellular organisms → Bacteria	9893	Open in IMG/M
3300025928\|Ga0207700_10515373	Not Available	1059	Open in IMG/M
3300025928\|Ga0207700_11422673	Not Available	616	Open in IMG/M
3300025928\|Ga0207700_11778210	Not Available	542	Open in IMG/M
3300025929\|Ga0207664_11771198	Not Available	540	Open in IMG/M
3300025939\|Ga0207665_10571735	Not Available	880	Open in IMG/M
3300026078\|Ga0207702_11403523	Not Available	692	Open in IMG/M
3300027376\|Ga0209004_1096469	Not Available	501	Open in IMG/M
3300027826\|Ga0209060_10003183	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	14044	Open in IMG/M
3300027842\|Ga0209580_10061054	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1774	Open in IMG/M
3300027842\|Ga0209580_10083783	Not Available	1527	Open in IMG/M
3300027842\|Ga0209580_10321643	Not Available	771	Open in IMG/M
3300027857\|Ga0209166_10071488	Not Available	1975	Open in IMG/M
3300030847\|Ga0075405_11732750	Not Available	681	Open in IMG/M
3300031231\|Ga0170824_104333587	Not Available	625	Open in IMG/M
3300031231\|Ga0170824_125182236	Not Available	1542	Open in IMG/M
3300031446\|Ga0170820_17559459	Not Available	1212	Open in IMG/M
3300031474\|Ga0170818_100391573	Not Available	604	Open in IMG/M
3300031474\|Ga0170818_108215184	Not Available	575	Open in IMG/M
3300031938\|Ga0308175_101235000	Not Available	831	Open in IMG/M
3300031996\|Ga0308176_10923121	Not Available	918	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.62%
Host-Associated	Host-Associated	15.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.65%
Plants	Host-Associated → Plants	10.58%
Human	Host-Associated → Human	4.81%
Aquatic	Environmental → Aquatic	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.77%
Digestive System	Host-Associated → Human → Digestive System	4.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.81%
Freshwater	Environmental → Aquatic → Freshwater	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.15%
Loam	Environmental → Terrestrial → Soil → Loam	37.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.77%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	4.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	34.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.77%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	4.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.88%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	26.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	10.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	4.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.81%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	4.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.96%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003571	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Bulk_35 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020077	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N57_02275490	2170459013	Grass Soil	MPNNNNRVLTRRGARQLSQDEIEQTTGAGATLLSVIMTNTAGNPDQRLDS
deeps_01550260	2199352024	Soil	MPNDSNRVLTRRGARQLTQNEIEQTTGAGATLLSVIVTNTGGNPDQRLDS
soilH1_101540863	3300003321	Sugarcane Root And Bulk Soil	MPNDNNRVLTRRGARQLTQNEIDQTAGAANTLLSVIVTNTAGNPDQRLDS*
Ga0007419J51692_10977921	3300003571	Avena Fatua Rhizosphere	MPNDNNRVLTRRGARQLSQNEIEQTAGAGATLLSVIVTNTAGNPDQRLDS*
Ga0062595_1006501393	3300004479	Soil	MPNDSNRVLTRKGARQLSPDEMEQTTGAGATLLSVIVTNTAGNPDQRLDS*
Ga0058863_118922902	3300004799	Host-Associated	MPNDSNRVLTRRGARQLSQNEIEQTAGRANTLLSMMLTNSAGHPDQRLDS*
Ga0058861_101678181	3300004800	Host-Associated	VPKDNDRVLTRRGARQLSPDEMEQTAGAGATLLSVIVTNTAGNPDQRLDT*
Ga0058861_119424403	3300004800	Host-Associated	MPNDSNRVLTRRGARQLSQNEIEQTAGGANTLLSMMLTNSAGHPDQRLDS*
Ga0058861_119546363	3300004800	Host-Associated	MPNNTNRVLTRRGARQLSQDEVEQTTGAAATLLSVIVTNTGGNPDQRLDS*
Ga0058862_102157311	3300004803	Host-Associated	RGARQLSPDEMEQTAGAGATLLSVIVTNTAGNPDQRLDT*
Ga0070709_100104331	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDSNRVLTRRGARQLSQDEIEQTSGAGATLLSVIVTNTAGNPDQKLD
Ga0070709_100425302	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDNNRVLTRRGARQLSQDEIEQTAGAGATLLSVIVTNTAGNPDQRLDS*
Ga0070709_100592043	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSNDSNRVLTRRGARQLSHDEMEQTAGGGATLLSVIVTNTNGNADQRLDS*
Ga0070709_108974851	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDNNRVLTRRGARQLSHDEMEQATGAAITLLSVIVTNTGGNPDQRLDT*
Ga0070714_1006030673	3300005435	Agricultural Soil	MPNDNNRVLTRRGARQISHDEMEQTAGGGATLLSVIVTNTNGNADQRLDS*
Ga0070714_1008414843	3300005435	Agricultural Soil	MPNHNNRVLTRRGARQLSQDEIQQTAGAGATLLSVIMTTTASGSSDQKLDS*
Ga0070714_1011868081	3300005435	Agricultural Soil	MPNDNNRVLTRRGARQLSQDEIEQTAGAGATLLSVIVTNTAGNPDQKLDS*
Ga0070713_1000543861	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSNDSNRVLTRTGARQLSQNEIEQTAGAGATLLSVIMTTTTSGSSDQKLDS*
Ga0070713_1004483091	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDNRVLTRRGARQLSQDEIEQTTGAGATLLSVIMTTTTSGSSDQKLDS*
Ga0070713_1005180024	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDSNRVLTRRGARQLSQDEIEQTTGAGATLLSVIMTTTTSGSSDQKLDS*
Ga0070710_102677352	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDNNRVLTRRGARQLSQGEIEQTAGAGATLLSVIVTNTAGNPDQKLDS*
Ga0070710_103369174	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSNDNNRVLTRRGARQLSQNEMEQINGAGATLLSVIVTNVGGTPDQRLDS*
Ga0070711_1000207236	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDNNRVLTRRGARQLSQDEIEQTAGAGATLLSVIVTHTAGNPDQRLDT*
Ga0070681_106435413	3300005458	Corn Rhizosphere	MPNQDGNRVLTRMGVRKLSQDEIEQTAGAAATLLSVIVTNTSGNPDQRLDS*
Ga0073909_100535594	3300005526	Surface Soil	MPNDSNRVLTRRGARQLSHDEMEQTAGAAITLLSVIVTNTSGNPDQRLDT*
Ga0070679_1002665676	3300005530	Corn Rhizosphere	VPKDNDRVLTRRGARQLSQDEMEQTAGAGATLLSVIVTNTAGNPDQRLDT*
Ga0070734_1000203412	3300005533	Surface Soil	MSNNENNRVLTRRGARQLSQDEIEQTSGAAATLLSVIMTTTSSGSSDQKLDS*
Ga0070730_100864835	3300005537	Surface Soil	MPNDNNRVLTRRGARQLSQDEIEQTAGAGATLLSVIITTQNGNRDQRLDS*
Ga0070732_100521003	3300005542	Surface Soil	MPNDSNRVLTRRGARQLSHDEVEQTAGAGATLLSVIVTNTAGNPDQRLDS*
Ga0070732_100895913	3300005542	Surface Soil	MPNDSNRVLTRRGARQLSQDEIEQTAGAANTLLSVIITNQNGNRDQRLDN*
Ga0070732_103251193	3300005542	Surface Soil	MPNDSNRVLTRRGARQLSQDEIEQTTGAGATLLSVIVTNTSGNPDQRLDT*
Ga0070693_1009158681	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	KGARQLSPDEMEQTTGAGATLLSVIVTNTAGNPDQRLDS*
Ga0068855_1023814252	3300005563	Corn Rhizosphere	MPNDSNRVLTRRGARQLSQDEIEQTAGASATLLSVIVTNTAGNPDQRLDT*
Ga0068856_1014452641	3300005614	Corn Rhizosphere	MPNDSNRVLTRRGARQLSHDEMEQTAGAAITLLSVIVTNTSG
Ga0066903_1089547092	3300005764	Tropical Forest Soil	MSNDNNRVLTRRGARQLSHDEMEQTTGAAITLLSVILTNPAGTDHRLDS*
Ga0070717_101213004	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPNNNRVLTRRGARQLSQDEIDQAAGGVNTLLSVIITTQNGNRDQRLDS*
Ga0070717_103788381	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDSNRVLTRRGARQLSQDEIEQTAGAGATLLSVIVTNTAGNPDQRLDS*
Ga0070717_104284094	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDNNRVLTRRGARQLSQDEIEQTSGAGATLLSVIMTTTTSGSSDQKLDS*
Ga0070717_107468292	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSNDGNRVLTRRGARQLSQNEIEQTAGAGATLLSVIMTTTTSGSSDQKLDS*
Ga0070715_101222142	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDSNRVLTRRGARQLSKDEIEQTAGAGATLLSVIVTNTAGNPDQRLDS*
Ga0070716_1008972503	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	TRRGARQLSQNEMEQISGAGATLLSVIVTNVGGTRDQRLDS*
Ga0070712_1016560662	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDSNRVLTRRGARQLSQDEIEQTSGAGATLLSVIVTNTAGNPDQKLDS*
Ga0079222_101927873	3300006755	Agricultural Soil	MPNDNNRVLTRRGARQLSHDEIEQTAGAGATLLSVIVTNTAGNPDQRLDS*
Ga0079222_109281184	3300006755	Agricultural Soil	MPNDNDRVLTRRGARQLSHDEMDQTTGAAITLLSVIVTNTGGNPDQRLDT*
Ga0079220_109784242	3300006806	Agricultural Soil	MPNDNNRVLTRRGARQLSQDEIEQITGAGATLLSVIMTNVDGNPDQRHDT*
Ga0079220_113304502	3300006806	Agricultural Soil	MPNDSNRVLTRRGARQLSHDEMEQTTGASITLLSVIVTNTAGNPDQRLDT*
Ga0079219_111721152	3300006954	Agricultural Soil	MPNDNNRLLTRRGARQLSHAEMEHTAGGGATLLSVIVTNTNGNADQRLDS*
Ga0105240_123761841	3300009093	Corn Rhizosphere	KGDHMPNNSNRVLTRRGARQLSQDEVEQTTGAAATLLSVIVTNTGGNPDQRLDS*
Ga0105245_100271334	3300009098	Miscanthus Rhizosphere	MPNDSNRVLTRKGARQLSQDEIEQTAGAGATLLSVIVTNTAGNPDQRLDS*
Ga0105245_100543695	3300009098	Miscanthus Rhizosphere	MPNNSNRVLTRRGARQLSQDEVEQTTGAAATLLSVIVTNTGGNPDQRLDS*
Ga0105238_102871333	3300009551	Corn Rhizosphere	MPKDNDRVLTRRGARQLSQDEMEQTAGAGATLLSVIVTNTAGNPDQRLDT*
Ga0126370_101621932	3300010358	Tropical Forest Soil	MPNDNNRVLTRKGARHLSHDEMEQTTGAAITLLSVILTNPATDPDRRLDT*
Ga0134128_101010264	3300010373	Terrestrial Soil	MPNDNNRVLTRRGARQLSQDEIDQTAGGIPTLLSVIVTNTNGNPDQRLDS*
Ga0126381_1002139814	3300010376	Tropical Forest Soil	MPNDNNRVLTRRGARQLSHDEMEQTTGAAITLLSVILTNPASDLDRRLDT*
Ga0134124_118878711	3300010397	Terrestrial Soil	LSQDEIEQTAGAGATLLSVIVTNTAGNPNQRLDT*
Ga0134124_119971013	3300010397	Terrestrial Soil	MPNDSTRVLTRRGARQLSQDEIEQTAGAGATLLSVIVTNTAGNP
Ga0126383_100217547	3300010398	Tropical Forest Soil	MSNDSNRVLTRRGARQLTQNEIEQTAGAANTLLSVIITTQDGNRDQRLDN*
Ga0150983_128971413	3300011120	Forest Soil	MPNDTNRVLTRRGARQLSQDEIEQTTGAGATLLSVIVTHTAGNPDQRLDS*
Ga0164298_107314111	3300012955	Soil	NDSNRVLTRRGARQLSHDEMEQTAGGGATLLSVIVTNTNGNADQRLDS*
Ga0164303_105501432	3300012957	Soil	MPNDNNRVLTRRGARQLSHDEMEQTTGAAITLLSVILTNPASDPDRRLDT*
Ga0164301_103139282	3300012960	Soil	MPNDSNRVLTRRGARQLSQDEIEQTAGAGATLLSVIVTNTAGNPDQRLDT*
Ga0164309_109320522	3300012984	Soil	MPNDSNRVLTRRGARQLSQDEIEQTAGAGATLLSVIVINTAGNPDQRLDT*
Ga0164304_117877681	3300012986	Soil	MPNDSNRVLTRRGARQLSHDEIEQTAGAGATLLSVIVTNTAGNPDQRLDS*
Ga0164307_100454367	3300012987	Soil	MSNDSNRVLTRRGARQLSHDEMEQTAGGGATLLSVIVTNTAGNPDQRLDS*
Ga0164306_102720964	3300012988	Soil	MPNDSNRVLTRRGARQLFQDEIEQTAGAGATLLSVIVTNTAGNPDQRLDS*
Ga0163162_111923681	3300013306	Switchgrass Rhizosphere	MYAEPGNNRVLTRMGVRKLSQDEIEQTAGAAATLLSVIVTNTSGNPDQRLDS*
Ga0187821_103492152	3300017936	Freshwater Sediment	MPNDSNRVLTRRGARQLSQDEIEQTAGAANTLLSVIITNQNGNRDQRLDT
Ga0206356_100698562	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	VPKDNDRVLTRRGARQLSPDEMEQTAGAGATLLSVIVTNTAGNPDQRLDT
Ga0206356_119065382	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MPNNSNRVLTRRGARQLSQDEVEQTTGAAATLLSVIVTNTGGNPDQRLDS
Ga0206351_103584982	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDSNRVLTRRGARQLSQDEIEQTAGASATLLSVIVTNTAGNPDQRLDT
Ga0206352_110003151	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MPNNTNRVLTRRGARQLSQDEVEQTTGAAATLLSVIVTNTGGNPDQRLDS
Ga0206350_115674146	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	RQLSPDEMEQTAGAGATLLSVIVTNTAGNPDQRLDT
Ga0126371_102207725	3300021560	Tropical Forest Soil	MPNDSNRVLTRRGARQLSHDEMEQTTGAAITLLSVILTNPAGTDHRLDS
Ga0126371_122708352	3300021560	Tropical Forest Soil	MPNDNNRVLTRRGARQLSHDEMEQTTGGAITLLSVILTNPASDPDRRLDT
Ga0207692_104087383	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDNNRVLTRRGARQLSQGEIEQTAGAGATLLSVIVTNTAGNPDQKLDS
Ga0207685_100766574	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDSNRVLTRRGARQLSKDEIEQTAGAGATLLSVIVTNTAGNPDQKLDS
Ga0207707_101166321	3300025912	Corn Rhizosphere	MPNDSNRVLTRRGARQLSQNEIEQTAGRANTLLSMMLTNSAGHPDQRLDS
Ga0207707_105646022	3300025912	Corn Rhizosphere	MPNQDGNRVLTRMGVRKLSQDEIEQTAGAAATLLSVIVTNTSGNPDQRLDS
Ga0207693_100775035	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDNNRVLTRRGARQLSQDEIEQTAGAGATLLSVIVTHTAGNPDQRLDT
Ga0207693_106362312	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDSNRVLTRRGARQLSQDEIEQTSGAGATLLSVIVTNTAGNPDQKLDS
Ga0207663_109283851	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	DNNRVLTRRGARQLSQDEIEQTAGAGATLLSVIVTNTAGNPDQRLDS
Ga0207694_109027762	3300025924	Corn Rhizosphere	MPKDNDRVLTRRGARQLSQDEMEQTAGAGATLLSVIVTNTAGNPDQRLDT
Ga0207687_100197555	3300025927	Miscanthus Rhizosphere	MPNDSNRVLTRKGARQLSQDEIEQTAGAGATLLSVIVTNTAGNPDQRLDS
Ga0207700_1000289410	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSNDSNRVLTRTGARQLSQNEIEQTAGAGATLLSVIMTTTTSGSSDQKLDS
Ga0207700_105153731	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MPNHNNRVLTRRGARQLSQDEIQQTAGAGATLLSVIMTTTASGSSDQKLDS
Ga0207700_114226732	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDNNRVLTRRGARQLSQDEIEQTSGAGATLLSVIMTTTASGSSDQKLDS
Ga0207700_117782101	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDSNRVLTRRGARQLSQDEIEQTTGAGATLLSVIMTTTTSGSSDQKLDS
Ga0207664_117711983	3300025929	Agricultural Soil	MSNDSNRVLTRRGARQLSQDEIQQTAGAGATLLSVIMTTTASGSSD
Ga0207665_105717353	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDSNRVLTRRGARQLSKDEMEQTTGAGATLLSVIVTNTAGNPDQRLDT
Ga0207702_114035231	3300026078	Corn Rhizosphere	MPNDSNRVLTRRGARQLSHDEMEQTAGAAITLLSVIVTNTSGNPDQRLDT
Ga0209004_10964692	3300027376	Forest Soil	MPNDNNRVLTRRGARQLSQDEIDQTAGGINTLLSVIITTQNGNRDQRLDS
Ga0209060_1000318313	3300027826	Surface Soil	MSNNENNRVLTRRGARQLSQDEIEQTSGAAATLLSVIMTTTSSGSSDQKLDS
Ga0209580_100610543	3300027842	Surface Soil	MPNDSNRVLTRRGARQLSQDEIEQTAGAANTLLSVIITNQNGNRDQRLDN
Ga0209580_100837833	3300027842	Surface Soil	MPNDSNRVLTRRGARQLSHDEVEQTAGAGATLLSVIVTNTAGNPDQRLDS
Ga0209580_103216431	3300027842	Surface Soil	MPNDSNRVLTRRGARQLSQDEIEQTTGAGATLLSVIVTNTSGNPDQRLDT
Ga0209166_100714883	3300027857	Surface Soil	MPNDNNRVLTRRGARQLSQDEIEQTAGAGATLLSVIITTQNGNRDQRLDS
Ga0075405_117327501	3300030847	Soil	MPNDNNRVLTRRGARQLSQDEIEQTSGAANTLLSVIITNQNGNRDQRLDN
Ga0170824_1043335873	3300031231	Forest Soil	MPNDNNRVLTRRGARQLSQDEIEQTAGAANTLLSVIITSQNGNRDQRLDN
Ga0170824_1251822361	3300031231	Forest Soil	MANNTNRVLTRRGARQLSQDEIEQTAGAGATLLSVIVTHTAGNPDQRLDT
Ga0170820_175594594	3300031446	Forest Soil	MPNHNNRVLTRRGARQLSQDEIEQTSGAANTLLSVIMTNTAGNPDQRLDS
Ga0170818_1003915731	3300031474	Forest Soil	MPNNNNRVLTRRGARQLSQDEIEQTSGAANTLLSVIITNQNGNRDQRLDN
Ga0170818_1082151843	3300031474	Forest Soil	MEKAEKGDHMANNTNRVLTRRGARQLSQDEIEQTAGAGATLLSVIVTHTAGNPDQRLDT
Ga0308175_1012350001	3300031938	Soil	VPKDNNRVLTRRGARQLSQDEMEQTAGAGATLLSVIVTNTAGNPDQMLDT
Ga0308176_109231213	3300031996	Soil	VPKDNNRVLTRRGARQLSQDEMEQTAGAGATLLSVIVTNTAGNPDQRLDT

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098146

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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