Metagenome / Metatranscriptome Family F098177

Basic Information
Family ID	F098177
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	44 residues
Representative Sequence	MSTENQKPVAPGTTKVEPANTQPAPQQNQGDAKPSTDKPAGQQK
Number of Associated Samples	90
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.81 %
% of genes near scaffold ends (potentially truncated)	26.92 %
% of genes from short scaffolds (< 2000 bps)	82.69 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.14

Most Common Taxonomy
Group	Bacteria (71.154 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.192 % of family members)
Environment Ontology (ENVO)	Unclassified (32.692 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.192 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF07369	DUF1488	7.69
PF02798	GST_N	5.77
PF00313	CSD	2.88
PF07536	HWE_HK	1.92
PF03401	TctC	0.96
PF01177	Asp_Glu_race	0.96
PF08546	ApbA_C	0.96
PF02606	LpxK	0.96
PF01402	RHH_1	0.96
PF06042	NTP_transf_6	0.96
PF13302	Acetyltransf_3	0.96
PF01165	Ribosomal_S21	0.96
PF02371	Transposase_20	0.96
PF01717	Meth_synt_2	0.96
PF04909	Amidohydro_2	0.96
PF08125	Mannitol_dh_C	0.96
PF02518	HATPase_c	0.96
PF00487	FA_desaturase	0.96
PF01841	Transglut_core	0.96
PF02515	CoA_transf_3	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	1.92
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	1.92
COG0246	Mannitol-1-phosphate/altronate dehydrogenases	Carbohydrate transport and metabolism [G]	0.96
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.96
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	0.96
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.96
COG1663	Tetraacyldisaccharide-1-P 4'-kinase (Lipid A 4'-kinase)	Cell wall/membrane/envelope biogenesis [M]	0.96
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.96
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.96
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.96
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.96
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.96
COG3575	Uncharacterized conserved protein	Function unknown [S]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.15 %
Unclassified	root	N/A	28.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.15 %
Unclassified	root	N/A	28.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.15 %
Unclassified	root	N/A	28.85 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.38 %
Unclassified	root	N/A	28.85 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	34.62 %
Unclassified	root	N/A	28.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	27.88 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.85 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8.65 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	2.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.85 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.77 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	2.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.85 %
unclassified Pseudorhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes	2.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.85 %
Pseudorhodoplanes sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	2.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459016\|G1P06HT01DFRJ0	Not Available	596	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101668911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2884	Open in IMG/M
3300000956\|JGI10216J12902_106372356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5302	Open in IMG/M
3300000956\|JGI10216J12902_111065599	All Organisms → cellular organisms → Bacteria	1439	Open in IMG/M
3300001661\|JGI12053J15887_10180227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1087	Open in IMG/M
3300001686\|C688J18823_10463559	Not Available	815	Open in IMG/M
3300002074\|JGI24748J21848_1018445	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300002077\|JGI24744J21845_10016025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1494	Open in IMG/M
3300002245\|JGIcombinedJ26739_101449845	All Organisms → cellular organisms → Bacteria → Proteobacteria	581	Open in IMG/M
3300002568\|C688J35102_119132217	Not Available	643	Open in IMG/M
3300002568\|C688J35102_120162860	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300003324\|soilH2_10229178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	2591	Open in IMG/M
3300004114\|Ga0062593_100164192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1709	Open in IMG/M
3300004153\|Ga0063455_100058052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1370	Open in IMG/M
3300004157\|Ga0062590_100499262	Not Available	1036	Open in IMG/M
3300004463\|Ga0063356_100193613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2387	Open in IMG/M
3300004479\|Ga0062595_100807882	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300004479\|Ga0062595_101932771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300004480\|Ga0062592_100472732	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300004480\|Ga0062592_100499928	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300004643\|Ga0062591_100021885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3129	Open in IMG/M
3300005093\|Ga0062594_100089552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1786	Open in IMG/M
3300005093\|Ga0062594_103175838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	515	Open in IMG/M
3300005338\|Ga0068868_100766617	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300005356\|Ga0070674_101424950	Not Available	621	Open in IMG/M
3300005367\|Ga0070667_100496157	All Organisms → cellular organisms → Bacteria → Proteobacteria	1119	Open in IMG/M
3300005511\|Ga0077121_10404869	Not Available	952	Open in IMG/M
3300005529\|Ga0070741_10251159	All Organisms → cellular organisms → Bacteria	1685	Open in IMG/M
3300005564\|Ga0070664_100517422	Not Available	1101	Open in IMG/M
3300005575\|Ga0066702_10466104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	773	Open in IMG/M
3300005587\|Ga0066654_10412655	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300005841\|Ga0068863_102731248	Not Available	502	Open in IMG/M
3300006038\|Ga0075365_10520626	Not Available	841	Open in IMG/M
3300006042\|Ga0075368_10352058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	641	Open in IMG/M
3300009143\|Ga0099792_10488036	All Organisms → cellular organisms → Bacteria → Proteobacteria	769	Open in IMG/M
3300009174\|Ga0105241_12184530	Not Available	549	Open in IMG/M
3300009553\|Ga0105249_11289774	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300009553\|Ga0105249_13339033	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300010045\|Ga0126311_11653207	Not Available	540	Open in IMG/M
3300010052\|Ga0133944_1001186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	60665	Open in IMG/M
3300010397\|Ga0134124_11985400	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300010399\|Ga0134127_13292174	Not Available	528	Open in IMG/M
3300010400\|Ga0134122_12308637	Not Available	584	Open in IMG/M
3300012212\|Ga0150985_114730412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	569	Open in IMG/M
3300012212\|Ga0150985_121963229	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300012469\|Ga0150984_113876647	Not Available	597	Open in IMG/M
3300012683\|Ga0137398_10206993	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300012882\|Ga0157304_1067675	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300012892\|Ga0157294_10114486	Not Available	710	Open in IMG/M
3300012896\|Ga0157303_10045378	Not Available	878	Open in IMG/M
3300012901\|Ga0157288_10057335	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300012913\|Ga0157298_10011441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1493	Open in IMG/M
3300012924\|Ga0137413_10229389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1264	Open in IMG/M
3300012927\|Ga0137416_10065573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2611	Open in IMG/M
3300012930\|Ga0137407_11404810	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300012957\|Ga0164303_11345773	Not Available	531	Open in IMG/M
3300012958\|Ga0164299_11005868	Not Available	615	Open in IMG/M
3300013297\|Ga0157378_12801958	Not Available	540	Open in IMG/M
3300014325\|Ga0163163_10678009	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300014968\|Ga0157379_11046815	Not Available	780	Open in IMG/M
3300015372\|Ga0132256_100528704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1291	Open in IMG/M
3300015372\|Ga0132256_102914942	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300015373\|Ga0132257_100847530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1143	Open in IMG/M
3300015373\|Ga0132257_103014066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	613	Open in IMG/M
3300017792\|Ga0163161_11728834	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300017965\|Ga0190266_10516303	Not Available	700	Open in IMG/M
3300018067\|Ga0184611_1277316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300018073\|Ga0184624_10314649	Not Available	701	Open in IMG/M
3300018432\|Ga0190275_10003292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11505	Open in IMG/M
3300018432\|Ga0190275_10005268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9309	Open in IMG/M
3300018469\|Ga0190270_10761929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	969	Open in IMG/M
3300018469\|Ga0190270_11022024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	854	Open in IMG/M
3300018469\|Ga0190270_12690646	Not Available	560	Open in IMG/M
3300018476\|Ga0190274_10699679	All Organisms → cellular organisms → Bacteria → Proteobacteria	1057	Open in IMG/M
3300019361\|Ga0173482_10007344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2683	Open in IMG/M
3300019883\|Ga0193725_1111844	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300019884\|Ga0193741_1037488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1251	Open in IMG/M
3300020005\|Ga0193697_1092016	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300021170\|Ga0210400_10583834	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300021363\|Ga0193699_10029025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2062	Open in IMG/M
3300022756\|Ga0222622_10056813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2237	Open in IMG/M
3300022883\|Ga0247786_1131272	Not Available	556	Open in IMG/M
3300023064\|Ga0247801_1029822	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300024347\|Ga0179591_1023853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2340	Open in IMG/M
3300025899\|Ga0207642_10043037	All Organisms → cellular organisms → Bacteria → Proteobacteria	1989	Open in IMG/M
3300025930\|Ga0207701_10237020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1595	Open in IMG/M
3300025937\|Ga0207669_11096034	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300025937\|Ga0207669_11587292	Not Available	558	Open in IMG/M
3300026078\|Ga0207702_12145573	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300026088\|Ga0207641_12495667	Not Available	515	Open in IMG/M
3300026089\|Ga0207648_11418156	Not Available	653	Open in IMG/M
3300026863\|Ga0209902_102680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4665	Open in IMG/M
3300027266\|Ga0209215_1059848	Not Available	532	Open in IMG/M
3300027603\|Ga0209331_1071412	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300027907\|Ga0207428_10696663	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300028536\|Ga0137415_10107297	All Organisms → cellular organisms → Bacteria	2642	Open in IMG/M
3300028810\|Ga0307294_10375228	Not Available	530	Open in IMG/M
3300030988\|Ga0308183_1192945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	526	Open in IMG/M
3300031456\|Ga0307513_10132765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2432	Open in IMG/M
3300031720\|Ga0307469_11672863	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300031720\|Ga0307469_11770550	Not Available	596	Open in IMG/M
3300032782\|Ga0335082_10115082	All Organisms → cellular organisms → Bacteria	2647	Open in IMG/M
3300033004\|Ga0335084_10077958	All Organisms → cellular organisms → Bacteria → Proteobacteria	3435	Open in IMG/M
3300034155\|Ga0370498_015090	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.35%
Host-Associated	Host-Associated	32.69%
Engineered	Engineered	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.50%
Plants	Host-Associated → Plants	31.73%
Aquatic	Environmental → Aquatic	3.85%
Microbial	Host-Associated → Microbial	0.96%
Solid Waste	Engineered → Solid Waste	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.46%
Roots	Host-Associated → Plants → Roots	3.85%
Sediment	Environmental → Aquatic → Sediment	2.88%
Unclassified	Environmental → Aquatic → Unclassified	0.96%
Bacteria	Host-Associated → Microbial → Bacteria	0.96%
Grass	Engineered → Solid Waste → Grass	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.58%
Loam	Environmental → Terrestrial → Soil → Loam	7.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.88%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.92%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Microbial → Bacteria → Unclassified	0.96%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.96%
Composting	Engineered → Solid Waste → Grass → Composting	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Microbial → Bacteria → Unclassified → Unclassified	0.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.96%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	8.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Liquid	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Liquid	0.96%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.96%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.96%
Cyanobacterial	Host-Associated → Microbial → Bacteria → Unclassified → Unclassified → Cyanobacterial	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.96%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.96%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002074	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1	Host-Associated	Open in IMG/M
3300002077	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3	Host-Associated	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005511	Combined assembly of arab plate scrape MF_Col (Combined Assembly)	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010052	Microbial community associated with the xenic strain of Eucapsis sp. UTEX 1529	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026863	Cyanobacterial communities from the Joint Genome Institute, California, USA - FECB-27 (SPAdes)	Host-Associated	Open in IMG/M
3300027266	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300034155	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2ZMR_02208770	2170459016	Switchgrass, Maize And Mischanthus Litter	MSNENDKSVAPGTTKADPANNQPAPQQNQGGAKPGSNKPADQQK
INPhiseqgaiiFebDRAFT_1016689115	3300000364	Soil	MNTENQKPVAPGTTKVEPANAQPAPQQNQGDAKPSTEKPAGQQK*
JGI10216J12902_1063723564	3300000956	Soil	MSNENQKPVAPGTTKIDPAQTQQPVPQQNQGDNKPGTEKPAEQQK*
JGI10216J12902_1110655992	3300000956	Soil	MSNETQKPVAPGTTKVEPATAPAPQQNQGDVKPGTEKPADQQK*
JGI12053J15887_101802271	3300001661	Forest Soil	MTNETEKPVAPGTTKVEPAVTPAPQQNQGDAKPSADKPANQQQK*
C688J18823_104635593	3300001686	Soil	MTNETQKPVAPGTTKIEPAVANPAPQQNQGDAKPSADKSANQQQK*
JGI24748J21848_10184452	3300002074	Corn, Switchgrass And Miscanthus Rhizosphere	MSNETQKPVAPGTTKVEPANAQPAPQQNQGDSKPSTDK
JGI24744J21845_100160252	3300002077	Corn, Switchgrass And Miscanthus Rhizosphere	MSNETQKPVAPGTTKVEPANAQPAPQQNQGDSKPSTDKPAEQXK*
JGIcombinedJ26739_1014498451	3300002245	Forest Soil	MKGFYLMTNETQKPVAPGTTKVEPAVSPAPQQNQGDAKPSADKPANQQQK*
C688J35102_1191322172	3300002568	Soil	MTNETQKPVAPGTTKVEPAAVQPAPQQNQGDAKPSTDKPAAQQK*
C688J35102_1201628602	3300002568	Soil	MSTENHNTVAPGTTKVEPANTHPAPQQNQGDAKPSTEKPASQQK*
soilH2_102291784	3300003324	Sugarcane Root And Bulk Soil	MSNENQKPVAPGTTKTDPAQGQPAPQQNQGDNKAGADKPAGQQK*
Ga0062593_1001641922	3300004114	Soil	MSNETQKPVAPGTTKVEPANAQPAPQQNQGDSKPSTDKPAEQQK*
Ga0063455_1000580522	3300004153	Soil	MSTENQKPVAPGTTNVEPANTHPAPQQNQGDAKPSTEKPAGQQK*
Ga0062590_1004992623	3300004157	Soil	VSNENQKSVTPDTKVEPATAQPAPQQSQADAKPSTDQAAGQKK*
Ga0063356_1001936135	3300004463	Arabidopsis Thaliana Rhizosphere	MSNENQKPVAPGTTKVDPQAQPAPQQNQGDGKQGTDKPANQQQK*
Ga0062595_1008078822	3300004479	Soil	MSTENQKPVAPGTTKVEPANVQPAPQQNQGDAKPSTDKPAGQQK*
Ga0062595_1019327711	3300004479	Soil	ENQKPVAPGTTKVEPANTQPAPQQNQGDAKPSADKPASQQK*
Ga0062592_1004727321	3300004480	Soil	VSNENQKSVTPDTKVEPATAQPAPQQSQADAKPGTDQAAGQKK*
Ga0062592_1004999282	3300004480	Soil	MSTENQKPVAPGTTKVEPANTQPAPQQNQGDAKPSTEKPAGQQK*
Ga0062591_1000218851	3300004643	Soil	ENQKPVAPGTTKTDPAQAQPAPQQNQGDNKAGNDKPANQQK*
Ga0062594_1000895526	3300005093	Soil	MNSENQKPVAPGTTKTDPAQAQPAPQQNQGDNKAGNDKPANQQK*
Ga0062594_1031758382	3300005093	Soil	TENQKPVAPGTTKVEPANTQPAPQQNQGDAKPSTEKPAGQQK*
Ga0068868_1007666171	3300005338	Miscanthus Rhizosphere	MNNENQKPVAPGTTKTDPAQAQPAPQQNQGDNKAGNDKPANQQK*
Ga0070674_1014249501	3300005356	Miscanthus Rhizosphere	MSTENQKPVAPGTTKVEPANAPAPQQNQGDAKPSTDKPADQQK*
Ga0070667_1004961571	3300005367	Switchgrass Rhizosphere	MTNETEKTVAPGTTKVEPAVTPTPQQNQGDAKPSADKPANQQQK*
Ga0077121_104048692	3300005511	Arabidopsis Rhizosphere	MTNETEKTVAPGTTKVEPAVTPAPQQNQGDAKPSADKPANQQQK*
Ga0070741_102511593	3300005529	Surface Soil	MSNENDKSVAPGTTKADPANNQPAPQQNQGGAKPGSNKPADQQK*
Ga0070664_1005174223	3300005564	Corn Rhizosphere	AQGIHKMNNENQKPVAPGTTKTDPAQAQPAPQQNQGDNKAGNDKPANQQK*
Ga0066702_104661041	3300005575	Soil	MTNETQKPVAPGSTHVEPAKSPAPQQTQGDAKPSADKSAQQK*
Ga0066654_104126552	3300005587	Soil	VSNENQKPVAPGTTKVEPATAQPAPQQNQGDAKPSTDKPAVQQK*
Ga0068863_1027312482	3300005841	Switchgrass Rhizosphere	MNNENQKPVSADTTKVEPAKAQPQQNQGDGKPGTGKPAEQ
Ga0075365_105206263	3300006038	Populus Endosphere	ENQKPVAPGTTTVEPNKTTPAPQQNQGDAKPSTDKPAGQQK*
Ga0075368_103520581	3300006042	Populus Endosphere	MSNENQKPVAPGTTTVEPNKTTPAPQQNQGDAKPSTDKPAGQQK*
Ga0099792_104880362	3300009143	Vadose Zone Soil	MSTENQKPVAPGTTKVEPASAQPAPQQNQGDAKPSTDKPADQQK*
Ga0105241_121845302	3300009174	Corn Rhizosphere	MSNESQKNAPGTTKVDPANTQPPQQQNQGDGTPNSEKPANQQK*
Ga0105249_112897742	3300009553	Switchgrass Rhizosphere	MAYLENAFRSFHEGIYFMTNETEKTVAPGTTKVEPAVTPTPQQNQGDAKPSADKPANQQQK*
Ga0105249_133390332	3300009553	Switchgrass Rhizosphere	MSNETQKPVAHGTTTVEPANAQPAPQQNQGDSKPSTDKPAEQQK*
Ga0126311_116532072	3300010045	Serpentine Soil	MSNEAQKPVAPGTTKVEPNAQPQQQNQGDAKPSTDKPDAQQK*
Ga0133944_100118645	3300010052	Liquid	MSNENQKPVAPTTKVDTAKTPSAPQQNQGDAKPSTEKPTVQQK*
Ga0134124_119854001	3300010397	Terrestrial Soil	MSTENQKPVAPGTTKVEPANTQPAPQQNQGDGKPSADKPASQ
Ga0134127_132921741	3300010399	Terrestrial Soil	MLLGLFMKGFHHMSTENQKPVAPGTTKVEPANTQPAPQQNQGDAKPSTEKPAGQQK*
Ga0134122_123086372	3300010400	Terrestrial Soil	MSTENQKPVAPGTTKVEPANAPAPQQNQGDAKPSTDKPAGQQK*
Ga0150985_1147304122	3300012212	Avena Fatua Rhizosphere	RVLVRSLMPNETQKPVAPGTTKIEPAVANPAPQQNQGDAKPSADKSANQQQK*
Ga0150985_1219632291	3300012212	Avena Fatua Rhizosphere	MTNETQKPVAPGTTKVEPAAVQPAPQQNQGDAKTDKPAAQQK*
Ga0150984_1138766472	3300012469	Avena Fatua Rhizosphere	YEGIYLMTNETQKPVAPGTTKIEPAVANPAPQQNQGDAKPSADKSANQQQK*
Ga0137398_102069934	3300012683	Vadose Zone Soil	MSTENQKPVAPGTTKVEPASAQPAPQQNQGDAKPSTDK
Ga0157304_10676752	3300012882	Soil	MNNENQKPVAPGTTKTDPAQAQPAPQQNQGDNKAGNDKPANQQ
Ga0157294_101144862	3300012892	Soil	MNNENQKPAAPGTTKTDPAQAQPAPQQNQGDNKAGNDKPANQQK*
Ga0157303_100453783	3300012896	Soil	FAQGIHKMNSENQKPVAPGTTKTDPAQAQPAPQQNQGDNKAGNDKPANQQK*
Ga0157288_100573351	3300012901	Soil	HQKPVAPGTTKVEPATVQPTPQQNQGDSKPSTDKPAEQQK*
Ga0157298_100114412	3300012913	Soil	MSNETQKPVAPGTTKVEPAAPQATPQQNQGDAKPSTDKPAEQQK*
Ga0137413_102293891	3300012924	Vadose Zone Soil	MTNETEKPVAPGTTKVEPAVTPAPQQNQGDAKPAADKPANQQQK*
Ga0137416_100655732	3300012927	Vadose Zone Soil	MTNETPTPVAPGTTKVEPAVTPAPQQNQGDAKPSADKPANQQQK*
Ga0137407_114048102	3300012930	Vadose Zone Soil	MTNETPTPVAPGTTKVEPAATPTPQQNQGDAKPSADKPANQQQK*
Ga0164303_113457731	3300012957	Soil	MTNEPQTSAPGTTKVDPANKQPPQQQNQGDGKPGSEKPANQQK*
Ga0164299_110058682	3300012958	Soil	VSNENQKSVTPDTKVEPATAQPAPQQSHADAKPSTDQAAGQKK*
Ga0157378_128019581	3300013297	Miscanthus Rhizosphere	MTNENQKPAAPGTTRVEPVKSPVPQQTQGDAKPATEKPAGQQK*
Ga0163163_106780091	3300014325	Switchgrass Rhizosphere	MSTENQKPVAPGTTKVDPAQAQPAPQQNQGDSKPSTDKPAEQQK*
Ga0157379_110468152	3300014968	Switchgrass Rhizosphere	MFLGFSERIDAMSNENQKPVAPGTTKADPANAQPAPQHNQGNPKPGADKPGSQQK*
Ga0132256_1005287042	3300015372	Arabidopsis Rhizosphere	MFLGLSRQGFIKMSNENQKPVAPGTTKVDPQAQPAPQQNQGDGKQGTDKPANQQQK*
Ga0132256_1029149422	3300015372	Arabidopsis Rhizosphere	MTNENQKPVAPGTSKVDPAQAQPAPQQNQGGSKPGTDKPAS
Ga0132257_1008475301	3300015373	Arabidopsis Rhizosphere	MKMSNENQKPVAPGTTKVDPQAQPAPQQNQGDGKQGSDKPANQQQK*
Ga0132257_1030140661	3300015373	Arabidopsis Rhizosphere	ENQKPVAPETKVEPTTGQPAQQQNQGDAKQNADKSGGQQK*
Ga0163161_117288342	3300017792	Switchgrass Rhizosphere	MSTENQKPVAPGTTKVDPAQAQPAPQQNQGDSKQGTDKPASQ
Ga0190266_105163031	3300017965	Soil	VAPGTTKVEPANTQPAPQQNQGDAKPSTEKPAGQQK
Ga0184611_12773161	3300018067	Groundwater Sediment	MTNETQKPVAPGTTKVEPTAQPTPQQNQGDAKPSTDKPADQQK
Ga0184624_103146491	3300018073	Groundwater Sediment	MSTENQKPVAPGTTKVEPANTQPAPQQNQGDAKPSTEKPAGQQK
Ga0190275_100032927	3300018432	Soil	MSNENQKPVAPGTTKVDPAQTPQPAPQQTQGDSKPGADKPADQQK
Ga0190275_100052683	3300018432	Soil	MSTENQKPVAPGTTKVEPANTQPAPQQNQGDAKPSTDKPAGQQK
Ga0190270_107619293	3300018469	Soil	MTNENQKPVAPGTTKVEPAHAQPATPQQNQGDSKPATEKPAEQQ
Ga0190270_110220243	3300018469	Soil	MSNENQKPVAPGTTKVEPAHAQPATPQQNQGDSKPATEKPAEQQK
Ga0190270_126906461	3300018469	Soil	MTTENQKPVAPGTTKVEPATAQPAPQQNQGDAKPSTEKPAGQQK
Ga0190274_106996792	3300018476	Soil	MSTENQKPVAPGTTKVEPANTQPAPQQNQGDAKPSTDKSAGQQK
Ga0173482_100073446	3300019361	Soil	MNNENQKPVAPGTTKTDPAQAQPAPQQNQGDNKAGNDKPANQQK
Ga0193725_11118441	3300019883	Soil	MTNEAQKPVVAPGTTHVEPAKSPAPQQNQGDAKPSTDK
Ga0193741_10374882	3300019884	Soil	MTNETQKPVAPGTTKVEPANAQPAPQQNQGDAKPDSDKPAQQK
Ga0193697_10920162	3300020005	Soil	MTNETEKHVAPGTTKVEPAVTPTPQQSQGDAKPSADKPAEQQK
Ga0210400_105838341	3300021170	Soil	MKGFCLMTNETLKPVAPGTTKVDPAITPAPQQNQGDAKPSADKPANQQQK
Ga0193699_100290254	3300021363	Soil	MKGFYLMTNETPTPVAPGTTKVEPAVTPTPQQNQGDAKPAADKPANQQQK
Ga0222622_100568136	3300022756	Groundwater Sediment	MSNETQKPVAPGTTKVEPANAQPAPQQNQGDSKPSTDKPAEQQK
Ga0247786_11312722	3300022883	Soil	MNSENQKPVAPGTTKTDPAQAQPAPQQNQGDNKAGNDKPANQQK
Ga0247801_10298221	3300023064	Soil	MNNENQKPVAPGTTKTDPAQAQPAPQQNQGDNKAG
Ga0179591_10238532	3300024347	Vadose Zone Soil	MTNETQKPVAPGTTKVEPAVTPTPQQNQGDAKPSADKPADQQQK
Ga0207642_100430372	3300025899	Miscanthus Rhizosphere	MSNETQKPVAPGTTKVEPANAPAPQQNQGDAKPNTDKPAGQQK
Ga0207701_102370201	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MNNENQKPVAPGTTKTDPAQAQPAPQQNQGDNKAGNDK
Ga0207669_110960342	3300025937	Miscanthus Rhizosphere	MSTENQKPVAPGTTKVDPAQAQPAPQQNQGDSKQGTDKPASQQK
Ga0207669_115872921	3300025937	Miscanthus Rhizosphere	SFHEGIHQMSTENQKPVAPGTTKVEPANAPAPQQNQGDAKPNTDKPAGQQK
Ga0207702_121455731	3300026078	Corn Rhizosphere	MSNEAQKSVAPGTTKVEPANTQTTPQQNQGGGKPDADKPSDQQK
Ga0207641_124956672	3300026088	Switchgrass Rhizosphere	MNNENQKPVSADTTKVEPAKAQPQQNQGDGKPGTGKPAEQQK
Ga0207648_114181561	3300026089	Miscanthus Rhizosphere	MSTENQKPVAPGTTKVEPANAPAPQQNQGDAKPSTDKPADQQK
Ga0209902_1026807	3300026863	Cyanobacterial	MSNENQKPVAPTTKVDTAKTPSAPQQNQGDAKPSTEKPTVQQK
Ga0209215_10598482	3300027266	Forest Soil	MSNENQKPVAPGATEVDPAQTQQPAPQQTQGDSKPSTDKPAQQK
Ga0209331_10714121	3300027603	Forest Soil	MKGFYLMTNETQKPVAPGTTKVEPAVSPAPQQNQGDAKPSADKPANQQQK
Ga0207428_106966631	3300027907	Populus Rhizosphere	MSNETQKPVAPGTTKVEPANAQPAPQQNQGDSKPSTD
Ga0137415_101072974	3300028536	Vadose Zone Soil	GISQMSTENQKPVAPGTTKVEPASAQPAPQQNQGDAKPRTDKPADQQK
Ga0307294_103752281	3300028810	Soil	MTNEAQKPVAPGTTKVEPAAAQPAPQQNQGDAKPSTDKPAAQQK
Ga0308183_11929452	3300030988	Soil	MTNENQKSVAPGTTKVEPAVAQPAPQQNQGDAKPSTDKPAAQQK
Ga0307513_101327651	3300031456	Ectomycorrhiza	MTNETEKTVAPGTTKVEPAATPTPQQNQGDAKPSADKPANQQQK
Ga0307469_116728632	3300031720	Hardwood Forest Soil	MTNETQKPVVAPGTTHVEPAKSPAPQQNQGDAKPSTEKPAGQQK
Ga0307469_117705501	3300031720	Hardwood Forest Soil	MSNENQKPVAPGTTKSDPAQTQPAPQQSQGDSKPGVDKPTDQQK
Ga0335082_101150826	3300032782	Soil	MSNENQKPAAPGTTKSGQASTQPPAQQNQGDAKSGSKPADQQK
Ga0335084_100779583	3300033004	Soil	MSNENQKPVAPGTTKSGQANTQPPAQQNQGDAKSGSKPADQQK
Ga0370498_015090_1263_1400	3300034155	Untreated Peat Soil	MSNENQKPVAPGTTKVDPAQTPQPAPQQTQGDNKPSTDKPAEQQK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.14
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.14
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098177

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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