Metagenome Family F098186

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098186
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	42 residues
Representative Sequence	MVDLSAQKPVRVLSAGEIEQKLASHQLYLKTEYHEGHRADF
Number of Associated Samples	79
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.88 %
% of genes near scaffold ends (potentially truncated)	93.27 %
% of genes from short scaffolds (< 2000 bps)	97.12 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.885 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (44.231 % of family members)
Environment Ontology (ENVO)	Unclassified (54.808 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.115 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.33% β-sheet: 0.00% Coil/Unstructured: 66.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF13561	adh_short_C2	6.73
PF02798	GST_N	6.73
PF00106	adh_short	3.85
PF00107	ADH_zinc_N	2.88
PF00149	Metallophos	1.92
PF00805	Pentapeptide	1.92
PF07758	DUF1614	1.92
PF09723	Zn-ribbon_8	1.92
PF10282	Lactonase	1.92
PF01925	TauE	0.96
PF14076	DUF4258	0.96
PF13610	DDE_Tnp_IS240	0.96
PF01118	Semialdhyde_dh	0.96
PF00596	Aldolase_II	0.96
PF13701	DDE_Tnp_1_4	0.96
PF05199	GMC_oxred_C	0.96
PF00753	Lactamase_B	0.96
PF08386	Abhydrolase_4	0.96
PF07690	MFS_1	0.96
PF00884	Sulfatase	0.96
PF03928	HbpS-like	0.96
PF13193	AMP-binding_C	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	1.92
COG4089	Uncharacterized membrane protein	Function unknown [S]	1.92
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.96
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.88 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.88 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.88 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	61.54 %
Unclassified	root	N/A	22.12 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	50.96 %
Unclassified	root	N/A	22.12 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.96 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	42.31 %
Unclassified	root	N/A	22.12 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.73 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	42.31 %
Unclassified	root	N/A	22.12 %
Aestuariivirgaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae	1.92 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.92 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.96 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.96 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	42.31 %
Unclassified	root	N/A	22.12 %
Aestuariivirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga	1.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.96 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.96 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	42.31 %
Unclassified	root	N/A	22.12 %
unclassified Aestuariivirga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga	1.92 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	0.96 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.96 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.96 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	42.31 %
Unclassified	root	N/A	22.12 %
Aestuariivirga sp. YIM B02566	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	1.92 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	0.96 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.96 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.96 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001545\|JGI12630J15595_10047212	Not Available	865	Open in IMG/M
3300003505\|JGIcombinedJ51221_10391588	Not Available	564	Open in IMG/M
3300005179\|Ga0066684_11052178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300005437\|Ga0070710_10294868	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300005439\|Ga0070711_101331839	Not Available	623	Open in IMG/M
3300009012\|Ga0066710_100714495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1529	Open in IMG/M
3300009137\|Ga0066709_103152509	Not Available	602	Open in IMG/M
3300009143\|Ga0099792_10194027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1150	Open in IMG/M
3300009792\|Ga0126374_11881265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300010048\|Ga0126373_10912721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	943	Open in IMG/M
3300010048\|Ga0126373_13049176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300010343\|Ga0074044_11031153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300010360\|Ga0126372_11587967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	693	Open in IMG/M
3300010362\|Ga0126377_13563468	Not Available	503	Open in IMG/M
3300010366\|Ga0126379_12665481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300010376\|Ga0126381_100518284	All Organisms → cellular organisms → Bacteria	1684	Open in IMG/M
3300010376\|Ga0126381_100710252	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300010376\|Ga0126381_100736721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1412	Open in IMG/M
3300010376\|Ga0126381_100762596	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1387	Open in IMG/M
3300010376\|Ga0126381_100796620	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300010376\|Ga0126381_101725413	Not Available	904	Open in IMG/M
3300010376\|Ga0126381_102053893	All Organisms → cellular organisms → Bacteria → Proteobacteria	823	Open in IMG/M
3300010376\|Ga0126381_102085646	All Organisms → cellular organisms → Bacteria → Proteobacteria	816	Open in IMG/M
3300010376\|Ga0126381_103009420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	669	Open in IMG/M
3300010398\|Ga0126383_11454871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	775	Open in IMG/M
3300010398\|Ga0126383_12631003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	586	Open in IMG/M
3300011120\|Ga0150983_10253149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	592	Open in IMG/M
3300011270\|Ga0137391_10328732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1315	Open in IMG/M
3300012206\|Ga0137380_11345075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	599	Open in IMG/M
3300012357\|Ga0137384_10939522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	696	Open in IMG/M
3300012683\|Ga0137398_10471021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	861	Open in IMG/M
3300012971\|Ga0126369_10321350	All Organisms → cellular organisms → Bacteria → Proteobacteria	1558	Open in IMG/M
3300012971\|Ga0126369_11030473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	911	Open in IMG/M
3300015357\|Ga0134072_10313438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300016270\|Ga0182036_10086907	All Organisms → cellular organisms → Bacteria → Proteobacteria	2087	Open in IMG/M
3300016270\|Ga0182036_10854332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	744	Open in IMG/M
3300016294\|Ga0182041_11245106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	680	Open in IMG/M
3300016294\|Ga0182041_11413515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	639	Open in IMG/M
3300016445\|Ga0182038_11448458	All Organisms → cellular organisms → Bacteria → Proteobacteria	616	Open in IMG/M
3300017822\|Ga0187802_10039884	All Organisms → cellular organisms → Bacteria	1696	Open in IMG/M
3300020581\|Ga0210399_11250495	Not Available	587	Open in IMG/M
3300021178\|Ga0210408_10910450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	684	Open in IMG/M
3300021479\|Ga0210410_11505214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	566	Open in IMG/M
3300021560\|Ga0126371_11079237	All Organisms → cellular organisms → Bacteria → Proteobacteria	943	Open in IMG/M
3300025916\|Ga0207663_10573736	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300025928\|Ga0207700_11084758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	716	Open in IMG/M
3300027635\|Ga0209625_1075103	Not Available	756	Open in IMG/M
3300027651\|Ga0209217_1074976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	989	Open in IMG/M
3300028047\|Ga0209526_10376688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	946	Open in IMG/M
3300028906\|Ga0308309_11458532	Not Available	585	Open in IMG/M
3300031231\|Ga0170824_110434027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300031543\|Ga0318516_10135389	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300031545\|Ga0318541_10840041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M
3300031546\|Ga0318538_10484572	Not Available	670	Open in IMG/M
3300031546\|Ga0318538_10506519	Not Available	654	Open in IMG/M
3300031564\|Ga0318573_10102398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1471	Open in IMG/M
3300031679\|Ga0318561_10036880	All Organisms → cellular organisms → Bacteria → Proteobacteria	2393	Open in IMG/M
3300031679\|Ga0318561_10298188	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300031680\|Ga0318574_10416620	Not Available	785	Open in IMG/M
3300031719\|Ga0306917_10248958	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300031719\|Ga0306917_11456140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300031724\|Ga0318500_10560365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	577	Open in IMG/M
3300031744\|Ga0306918_10169349	All Organisms → cellular organisms → Bacteria	1628	Open in IMG/M
3300031748\|Ga0318492_10542432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	618	Open in IMG/M
3300031768\|Ga0318509_10117318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1448	Open in IMG/M
3300031770\|Ga0318521_10148597	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300031777\|Ga0318543_10325082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	688	Open in IMG/M
3300031777\|Ga0318543_10378399	Not Available	634	Open in IMG/M
3300031793\|Ga0318548_10155376	Not Available	1116	Open in IMG/M
3300031793\|Ga0318548_10368998	Not Available	704	Open in IMG/M
3300031796\|Ga0318576_10545833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	546	Open in IMG/M
3300031797\|Ga0318550_10442278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300031845\|Ga0318511_10247347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	800	Open in IMG/M
3300031879\|Ga0306919_10018240	All Organisms → cellular organisms → Bacteria → Proteobacteria	4178	Open in IMG/M
3300031879\|Ga0306919_10630597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	826	Open in IMG/M
3300031893\|Ga0318536_10598769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300031894\|Ga0318522_10237493	Not Available	691	Open in IMG/M
3300031896\|Ga0318551_10231327	All Organisms → cellular organisms → Bacteria → Proteobacteria	1029	Open in IMG/M
3300031897\|Ga0318520_10067917	All Organisms → cellular organisms → Bacteria → Proteobacteria	1926	Open in IMG/M
3300031897\|Ga0318520_11076323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300031910\|Ga0306923_10379352	Not Available	1611	Open in IMG/M
3300031912\|Ga0306921_12662712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300031942\|Ga0310916_11587419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300031945\|Ga0310913_11194619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300031946\|Ga0310910_11004430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	652	Open in IMG/M
3300031946\|Ga0310910_11421358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	533	Open in IMG/M
3300031947\|Ga0310909_10384508	All Organisms → cellular organisms → Bacteria → Proteobacteria	1179	Open in IMG/M
3300031947\|Ga0310909_10712062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	833	Open in IMG/M
3300031947\|Ga0310909_10761125	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300032035\|Ga0310911_10399509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	795	Open in IMG/M
3300032052\|Ga0318506_10321570	Not Available	686	Open in IMG/M
3300032059\|Ga0318533_11252349	Not Available	542	Open in IMG/M
3300032060\|Ga0318505_10483865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300032063\|Ga0318504_10584070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	536	Open in IMG/M
3300032066\|Ga0318514_10291886	Not Available	861	Open in IMG/M
3300032076\|Ga0306924_10498979	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300032091\|Ga0318577_10096674	Not Available	1379	Open in IMG/M
3300032091\|Ga0318577_10576041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	535	Open in IMG/M
3300032094\|Ga0318540_10329271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → unclassified Aestuariivirga → Aestuariivirga sp. YIM B02566	737	Open in IMG/M
3300032180\|Ga0307471_101757789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	773	Open in IMG/M
3300032261\|Ga0306920_101019275	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300033289\|Ga0310914_10540959	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300033289\|Ga0310914_11646642	Not Available	545	Open in IMG/M
3300033290\|Ga0318519_11078732	Not Available	501	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.04%
Aquatic	Environmental → Aquatic	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.04%
Freshwater	Environmental → Aquatic → Freshwater	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.50%
Loam	Environmental → Terrestrial → Soil → Loam	10.58%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	59.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	44.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	19.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12630J15595_100472121	3300001545	Forest Soil	MADLSARKPVRVLSPDEIDRTLAEHGLYLETESRQGHRTHL*
JGIcombinedJ51221_103915882	3300003505	Forest Soil	MADLSARTPLRVLSPDEIERALVEHRLYLETEYHEGHRANF
Ga0066684_110521781	3300005179	Soil	MADFSARTPVRVLSPDEIEQMLASHRLYLETEYHEGHRANF
Ga0070710_102948682	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MAALLARAPVRVLSPDEIEQMLAGHRLYLETEYHQGHRAN
Ga0070711_1013318391	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MADLTARTPVRVLSPDEIERMLAEHRLYLETEYHQGHRANFSS
Ga0066710_1007144951	3300009012	Grasslands Soil	MADFSARPPVRVRSPDEIEQMYSAHRLYLETEWRQGHRANFASAD
Ga0066709_1031525091	3300009137	Grasslands Soil	MADLTARTPVRVLSPDEIERMLVEHRLYLETEYHQGHRANLSSADLTGRDF
Ga0099792_101940272	3300009143	Vadose Zone Soil	MADLSARTPVRVPSPDEIERMLAEHRLYLETEYHQGHRALGR*
Ga0126374_118812651	3300009792	Tropical Forest Soil	MADLSARGPVRVLSADEIEQMLASHRLYLRTEYHEGHRANFSSAD
Ga0126373_109127211	3300010048	Tropical Forest Soil	MAALAERTPVRVLSRDEIEQMLASHRLYLETEYHEGHRAN
Ga0126373_130491761	3300010048	Tropical Forest Soil	MADLSAKRPTRVLSADEFEEMLASHRLYLKTEYHEGHRADFSSADLTG
Ga0074044_110311531	3300010343	Bog Forest Soil	MADFSAQRPVRVLSADEINQMLASHQLYLKTEYHEGHRA
Ga0126372_115879672	3300010360	Tropical Forest Soil	MADFAGPRPIRVLSSEEIAQMLASHRLYRETEYHEGANAGN*
Ga0126377_135634681	3300010362	Tropical Forest Soil	MAEFSARAPIRVLSPDKIEQLLVSHQLYLETEYHEGH
Ga0126379_126654811	3300010366	Tropical Forest Soil	MADLSARAPIRVLSPDKIEQLLVSHQLYLETEYHEGHRANFSPADLIRR
Ga0126381_1005182843	3300010376	Tropical Forest Soil	MTDLSSGRSVRVLSLDEIEQMLALHRLYLDTEYREGHRANFASVDLTG*
Ga0126381_1007102522	3300010376	Tropical Forest Soil	MADFSAQPPVRVLSPDQIEQMLAEHQLYLETEYHQGHRANF
Ga0126381_1007367214	3300010376	Tropical Forest Soil	MADLSVRKPLRVLSLDEIEQMLALHRRYLDTEYHEGHRANFASVDLTGR
Ga0126381_1007625964	3300010376	Tropical Forest Soil	MADFSARPPVRVLSADEIEQLLASHRLYLETEYHEGHRA
Ga0126381_1007966201	3300010376	Tropical Forest Soil	MADLAERKPIRMLSRDEMEQMLALHRLYLETEYHEGHRAN
Ga0126381_1017254132	3300010376	Tropical Forest Soil	MADFEGREPIRVLSLEEIAQTLASHRHYRETEYHEGHRA
Ga0126381_1020538931	3300010376	Tropical Forest Soil	MADLSARAPIRVLSPDQIQQILASHQLYLETEYHEGHRANF
Ga0126381_1020856461	3300010376	Tropical Forest Soil	MADFAGRKAIRVLSAEKIAQMLASHRLYRETEYHEGHRANFSSVDLTGR
Ga0126381_1030094201	3300010376	Tropical Forest Soil	MADFAGLRPIRVLTAEEIAQMLAWHRLYRETEYHEGHRADFSSVDL
Ga0126383_114548712	3300010398	Tropical Forest Soil	MADLADRKPVRVLSHDEIEQMLASHRVYLETEYHQGHRANFAS
Ga0126383_126310032	3300010398	Tropical Forest Soil	ADLSVRLPLRVLSPDEIEQMLASHRRYLDTEYHEGHRANFASVDLTG*
Ga0150983_102531491	3300011120	Forest Soil	MADFSTRPPVRVLSPDEIERMLAEHRLYLETEYHQGHRANFASADLSG
Ga0137391_103287321	3300011270	Vadose Zone Soil	MADLTDRTPGRVLSPNEIERMLAEHQLYLDTEYHQGHRANFS
Ga0137380_113450752	3300012206	Vadose Zone Soil	MVDISARTPVRVLSPGEIERLLAEHRLYLETEYQEGHRANFASA
Ga0137384_109395221	3300012357	Vadose Zone Soil	MVDLSARTPVRVLSFGEIERLLAEHRLYLETEYHQ
Ga0137398_104710213	3300012683	Vadose Zone Soil	MADLSDRTPVRVLSPDEIERPLAEHRLYLETEYHEGHRANFASA
Ga0126369_103213501	3300012971	Tropical Forest Soil	MADFAERKPVRVLSRDEIEQMLASHRLYLETEYHEGHRANFASAD
Ga0126369_110304733	3300012971	Tropical Forest Soil	MADLAERKPIRMLSRDEMEQMLALHRLYLETEYHEGHRANFASADLSGRDF
Ga0134072_103134381	3300015357	Grasslands Soil	MADFSVRTPVRALSPDEIERMLAEHRLYLETEYHQGHRAN
Ga0182036_100869073	3300016270	Soil	MADLSAQKLIRVLSGDEIEQMLASHRLYLKTEYHEGHRADFSSADLTGL
Ga0182036_108543322	3300016270	Soil	MVDLSAQKPVRVLSAGKIEQKLASHQLYLKTEYHEGHRADFSSA
Ga0182041_112451061	3300016294	Soil	MADLSARGPLRVLSADEIEQMLASHRLYLKTEYHEGHRADFS
Ga0182041_114135151	3300016294	Soil	MVDLSAQKPVRVLSAGEIEQKLASHQLYLKTEYHEGHRAD
Ga0182038_114484582	3300016445	Soil	MTDLSAQRPVRELPPDEIEQMLALHRLYLETEYHEGHRANFSSTDLTG
Ga0187802_100398841	3300017822	Freshwater Sediment	MAELSDRKPVRVLSTAEIERTLALHQLYLNTEYHDGQRAN
Ga0210399_112504951	3300020581	Soil	MVDLSAQKPVRVLSAGEIEQKLASHQLYLKTEYHEGHR
Ga0210408_109104501	3300021178	Soil	MADLSARTPVRVLSPVEIERMLAEHRLYLETEYHQGHRANFSSA
Ga0210410_115052141	3300021479	Soil	SARTPLRVLLSDEIERMLAEHRLYLETEYHQGQRANFSSADLT
Ga0126371_110792371	3300021560	Tropical Forest Soil	MADFAARTPLRMLSPDEIERMLAEHRLYLETEYHGGH
Ga0207663_105737362	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MADLSARTPVRALSPVEIERMLAEHRLYLEMEYHQGHRANF
Ga0207700_110847581	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MADFSARASLPVLSPDDIERMLAEHRLYLETEYHEGQARISHQPI
Ga0209625_10751032	3300027635	Forest Soil	MADLSARPPLRVLSPGEIERMLAEHRLYLETEYHEGHRANFSSADLA
Ga0209217_10749761	3300027651	Forest Soil	MADLAARAPVRLLSPDEIERLLAEHRLYLETEYHEG
Ga0209526_103766881	3300028047	Forest Soil	MADLSARTPVRALSADEIERMLAEHQLYLETEYHQGHR
Ga0308309_114585322	3300028906	Soil	MADLSARTPLRVLSPDEIERALVEHRLYLETEYHEGHRANFSSADLSGR
Ga0170824_1104340271	3300031231	Forest Soil	MADLLARTPLRMLSPDEIERMLAEHRLYLETEYHQGHRANFSSA
Ga0318516_101353891	3300031543	Soil	MADLSAQKLIRVLSGDEIEQMLASHQLYLKTEYHE
Ga0318541_108400411	3300031545	Soil	MVDLSTQKPVRVLSAGEIEQKLASHQLYLKTEYHEGHRADCSSA
Ga0318538_104845721	3300031546	Soil	MVDLSTQKPVRVLSAGEIEQKLASHQLYLKTEYHECHRADFS
Ga0318538_105065191	3300031546	Soil	MVDLSTQKPVRVLSAGEIEEKLASHQLYLKTEYHEG
Ga0318573_101023983	3300031564	Soil	MADLSAQRPIRVLSGDEIDQTLASHQLYLKTEYRDGH
Ga0318561_100368801	3300031679	Soil	MVDLSAQKPVRVLSAGEIKQKLASHQLYLKTEYHEGHRADFS
Ga0318561_102981881	3300031679	Soil	MADLSAQKLIRVLSGDEIEQMLASHQLYLKTEYHEGHRADFS
Ga0318574_104166202	3300031680	Soil	MVDLSAQKVLSAGEIEQKLASHQLYVKTEYHEGHR
Ga0306917_102489581	3300031719	Soil	MADLSAQKLIRVLSGDEIEQMLASHQLYLKTEYHEGHRAD
Ga0306917_114561401	3300031719	Soil	MADLSAQKPVRVPSAGEIEQKLAWHQLYLKTEYHEGHRADFSSVDLT
Ga0318500_105603651	3300031724	Soil	MADLSAQKLIRVLSGDEIEQMLASHQLYLKTEYHEGHRADFSWADLTGLD
Ga0306918_101693493	3300031744	Soil	MVDLSTQKPVRVLSAGEIEQKLASHQLYLKTEYHEGLRA
Ga0318492_105424321	3300031748	Soil	MVDLSAQKPVRVLSAGEIKQKLASHQLYLKTEYHEGHRADFSSADLTRFD
Ga0318509_101173183	3300031768	Soil	MADLSAQRPVHVLSAHEINQMLASHQLYLKTEYHEG
Ga0318521_101485971	3300031770	Soil	MVDLSAQKPVRVLSAGEIEQKLASHQVYLKKEYHEGHR
Ga0318543_103250822	3300031777	Soil	MVDLSAQKPVRVLSAGEIEQKLASHQLYLKTEYHEGHRADF
Ga0318543_103783992	3300031777	Soil	MVDLSAQKVLSAGEIEQKLASHQLYVKTEYHEGHRADCSS
Ga0318548_101553762	3300031793	Soil	MADLSAQRVIRVLSADEIEQILASHRLYLKTEYHDGHRAD
Ga0318548_103689981	3300031793	Soil	MVDLSAQKPVRVLSAGEIEQKLASHQVYLKKEYHEGHRAD
Ga0318576_105458331	3300031796	Soil	MVDLSAEKPVRVLSAGEIEQKLASHQLYLKTEYHEGHRAD
Ga0318550_104422781	3300031797	Soil	MVDLSTQKPVRVLSAGEIEQKLASHQLYLKTEYHEGHRADCS
Ga0318511_102473472	3300031845	Soil	MVDLSTQKPVRVLSAGEIEQKLASHQLYLKTEYHEGHRADFSSADLT
Ga0306919_100182404	3300031879	Soil	MANLSTKRPVRVLFPDEIEQMLALHRLYLETEYHEGHRANFS
Ga0306919_106305971	3300031879	Soil	MVDLSTQKPVRVLSAGEIEQKLASHQLYLKTEYHEGHRADFSSADLAGFD
Ga0318536_105987691	3300031893	Soil	MVDLSTQKPVRVLSAGEIEQKLASHQLYLKTEYHEGHRADFSSADLTGF
Ga0318522_102374931	3300031894	Soil	MVDLSTQKPVRVLSAGEIEQKLASHQLYLKTEYHEGH
Ga0318551_102313271	3300031896	Soil	MADLSAQRPVRVLSAYEINQMLASHQLYLKTEYHEGHRADFSSADLTG
Ga0318520_100679173	3300031897	Soil	MADLSAQNPVRVPSAGEIEQKLAWHQLYLKTEYHEGH
Ga0318520_110763231	3300031897	Soil	MVDLSAQKPVRVLSAGKIEQKLASHQLYLKTEYHEGHRADFSSADLTRF
Ga0306923_103793521	3300031910	Soil	MADLAERTPVRVLSRDEIEQMLASHRLYRETEYHEGHRADFSSVDLTG
Ga0306921_126627121	3300031912	Soil	MGDLSAQKPVRVPSVDEIEQKLASHRLYLKTEYHDG
Ga0310916_115874191	3300031942	Soil	MVDLSTQKPVRVLSAGEIEQKLASHQLYLKTEYHEGHRADCSSADLTRFD
Ga0310913_111946192	3300031945	Soil	MVDLSAQKPVRVLSAGEIEQKLASHQVYLKKEYHEGHRADFSSADLTRF
Ga0310910_110044302	3300031946	Soil	MADLSAQKPIRVLSGDEIEQMLASHRLYLKTEYHEGHRADFS
Ga0310910_114213581	3300031946	Soil	MVDLSTQKPVRVLSAGEIEQKLASHQLYLKTEYHEGHRADFSSA
Ga0310909_103845081	3300031947	Soil	MVDLSAQKVLSAGEIEQKLASHQLYVKTEYHEGHRADCS
Ga0310909_107120621	3300031947	Soil	MADLSAQRPVHVLSAHEINQMLASHQLYLKTEYHEGHRADFSSA
Ga0310909_107611251	3300031947	Soil	MPDFSARTPVRVLSLDLIEQMLAEHQLYLKTEYHQGHRANFASA
Ga0310911_103995091	3300032035	Soil	MVDLSAQKPVRVLSAGKIEQKLASHQLYLKTEYHEGHRADFSS
Ga0318506_103215701	3300032052	Soil	MADLSAQKPVRVPSAGEIEQKLAWHQLYLTTEYHE
Ga0318533_112523492	3300032059	Soil	MVDLSAQTPVRVLSAGEIEQKLASHQLYLKTEYHEGPR
Ga0318505_104838651	3300032060	Soil	MADLSAQKLIRVLSGDEIEQMLASHQLYLKTEYHEGHRADFSW
Ga0318504_105840701	3300032063	Soil	MVDLSTQKPVRVLSAGEIEQKLASHQLYLKTEYHEGHRADFSSADLTG
Ga0318514_102918861	3300032066	Soil	MVDLSAQKPVRVLSAGEIEQKLASHQLYLKTEYHEGHRA
Ga0306924_104989791	3300032076	Soil	MVDLSAQKPVRVLSAGEIEQKLASHQVYLKKEYHEGHRADF
Ga0318577_100966741	3300032091	Soil	MVDLSAQKVLSAGEIEQKLASHQLYVKTEYHEGHRADCSSADLTRFD
Ga0318577_105760412	3300032091	Soil	MANFSAETPVRVLSPDEIDKMLADHSLHLEMEYHT
Ga0318540_103292711	3300032094	Soil	MADLSAQRPVHVLSAHEINQMLASHQLYLKTEYHEGH
Ga0307471_1017577893	3300032180	Hardwood Forest Soil	MADFSARPPVRVLSDDEIERMLADHRLYLEIVPQGLV
Ga0306920_1010192751	3300032261	Soil	MVDLSAQKPVRVLSAGEIKQKLASHQLYLKTEYHEGHRAD
Ga0310914_105409591	3300033289	Soil	MVDLSAQKPVRVLSAGEIKQKLASHQLYLKTEYHEGH
Ga0310914_116466421	3300033289	Soil	MVDLSAQKPVRVLSAGEIEQKLASHQVYLKKEYHEGQ
Ga0318519_110787322	3300033290	Soil	MADLTERNPVRVLSRDEIEQMLFLHRLYLETEYRE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098186

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences