Metagenome Family F098243

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098243
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	82 residues
Representative Sequence	MPRFKIGERVALNGLLGELHGGEAMGTVVFIAPDRHGMDVFDEYEIAFEDSRQLRVRSFQLTHIVLTDAETHEEAA
Number of Associated Samples	42
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	86.54 %
% of genes near scaffold ends (potentially truncated)	16.35 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	36
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.308 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (39.423 % of family members)
Environment Ontology (ENVO)	Unclassified (69.231 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.077 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 21.15% Coil/Unstructured: 78.85%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF02687	FtsX	5.77
PF04239	DUF421	2.88
PF03928	HbpS-like	1.92
PF12833	HTH_18	1.92
PF00072	Response_reg	0.96
PF12852	Cupin_6	0.96
PF02563	Poly_export	0.96
PF04366	Ysc84	0.96
PF03551	PadR	0.96
PF12728	HTH_17	0.96
PF01694	Rhomboid	0.96
PF12681	Glyoxalase_2	0.96
PF02739	5_3_exonuc_N	0.96
PF00144	Beta-lactamase	0.96
PF12704	MacB_PCD	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2323	Uncharacterized membrane protein YcaP, DUF421 family	Function unknown [S]	2.88
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.96
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG1596	Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold	Cell wall/membrane/envelope biogenesis [M]	0.96
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.96
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.96
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.96
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.96
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.96
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
All Organisms	root	All Organisms	32.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
cellular organisms	root	All Organisms → cellular organisms	32.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	18.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	13.46 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.46 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.46 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0870806	Not Available	625	Open in IMG/M
2228664022\|INPgaii200_c0872067	Not Available	508	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10003401	All Organisms → cellular organisms → Bacteria → Acidobacteria	4315	Open in IMG/M
3300000955\|JGI1027J12803_102365100	All Organisms → cellular organisms → Bacteria → Acidobacteria	1269	Open in IMG/M
3300001431\|F14TB_102821648	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300004268\|Ga0066398_10042439	Not Available	887	Open in IMG/M
3300004633\|Ga0066395_10316140	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300004633\|Ga0066395_10421757	Not Available	756	Open in IMG/M
3300005295\|Ga0065707_11008161	Not Available	527	Open in IMG/M
3300005332\|Ga0066388_100468682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1899	Open in IMG/M
3300005332\|Ga0066388_100495716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1858	Open in IMG/M
3300005332\|Ga0066388_101775509	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300005332\|Ga0066388_101826722	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300005332\|Ga0066388_102320713	Not Available	971	Open in IMG/M
3300005332\|Ga0066388_102819904	Not Available	888	Open in IMG/M
3300005332\|Ga0066388_104945704	Not Available	677	Open in IMG/M
3300005332\|Ga0066388_105641322	Not Available	633	Open in IMG/M
3300005332\|Ga0066388_106859258	Not Available	573	Open in IMG/M
3300005713\|Ga0066905_100077767	All Organisms → cellular organisms → Bacteria	2166	Open in IMG/M
3300005713\|Ga0066905_100122198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1819	Open in IMG/M
3300005713\|Ga0066905_100867415	Not Available	788	Open in IMG/M
3300005764\|Ga0066903_100741164	Not Available	1742	Open in IMG/M
3300005764\|Ga0066903_100757868	Not Available	1726	Open in IMG/M
3300005764\|Ga0066903_101164280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1428	Open in IMG/M
3300005764\|Ga0066903_101259489	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1378	Open in IMG/M
3300005764\|Ga0066903_101877486	Not Available	1147	Open in IMG/M
3300005764\|Ga0066903_102466931	Not Available	1006	Open in IMG/M
3300005764\|Ga0066903_103193952	Not Available	886	Open in IMG/M
3300005764\|Ga0066903_103515379	Not Available	844	Open in IMG/M
3300005764\|Ga0066903_103881490	Not Available	803	Open in IMG/M
3300005764\|Ga0066903_104514929	Not Available	742	Open in IMG/M
3300005764\|Ga0066903_105452328	Not Available	671	Open in IMG/M
3300005764\|Ga0066903_108179218	Not Available	535	Open in IMG/M
3300005764\|Ga0066903_108443901	Not Available	525	Open in IMG/M
3300006049\|Ga0075417_10027228	All Organisms → cellular organisms → Bacteria	2338	Open in IMG/M
3300006844\|Ga0075428_100021834	All Organisms → cellular organisms → Bacteria	7088	Open in IMG/M
3300006844\|Ga0075428_100509390	Not Available	1287	Open in IMG/M
3300006844\|Ga0075428_100844172	Not Available	973	Open in IMG/M
3300006845\|Ga0075421_100465090	Not Available	1508	Open in IMG/M
3300006845\|Ga0075421_101414006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300006845\|Ga0075421_102067066	Not Available	605	Open in IMG/M
3300006847\|Ga0075431_101670861	Not Available	594	Open in IMG/M
3300006880\|Ga0075429_101008987	Not Available	728	Open in IMG/M
3300006914\|Ga0075436_100861007	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300006969\|Ga0075419_10708446	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300006969\|Ga0075419_10778915	Not Available	683	Open in IMG/M
3300009094\|Ga0111539_11482890	Not Available	787	Open in IMG/M
3300009100\|Ga0075418_11784055	Not Available	669	Open in IMG/M
3300009100\|Ga0075418_11815157	Not Available	663	Open in IMG/M
3300009147\|Ga0114129_10295997	All Organisms → cellular organisms → Bacteria	2159	Open in IMG/M
3300009147\|Ga0114129_12126671	Not Available	677	Open in IMG/M
3300010043\|Ga0126380_10148784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1496	Open in IMG/M
3300010043\|Ga0126380_10569168	Not Available	885	Open in IMG/M
3300010043\|Ga0126380_10791584	Not Available	775	Open in IMG/M
3300010046\|Ga0126384_10488343	Not Available	1059	Open in IMG/M
3300010046\|Ga0126384_10666484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	918	Open in IMG/M
3300010046\|Ga0126384_10981429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300010046\|Ga0126384_11802979	Not Available	581	Open in IMG/M
3300010046\|Ga0126384_12112065	Not Available	541	Open in IMG/M
3300010047\|Ga0126382_10359870	Not Available	1119	Open in IMG/M
3300010047\|Ga0126382_10589291	Not Available	913	Open in IMG/M
3300010047\|Ga0126382_10629690	Not Available	888	Open in IMG/M
3300010047\|Ga0126382_10654155	Not Available	874	Open in IMG/M
3300010047\|Ga0126382_11904262	Not Available	563	Open in IMG/M
3300010358\|Ga0126370_10954042	Not Available	779	Open in IMG/M
3300010358\|Ga0126370_11206675	Not Available	704	Open in IMG/M
3300010359\|Ga0126376_11649606	Not Available	675	Open in IMG/M
3300010359\|Ga0126376_12525500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300010360\|Ga0126372_10404910	Not Available	1246	Open in IMG/M
3300010360\|Ga0126372_11416106	Not Available	728	Open in IMG/M
3300010360\|Ga0126372_11743390	Not Available	665	Open in IMG/M
3300010360\|Ga0126372_12709884	Not Available	548	Open in IMG/M
3300010361\|Ga0126378_10699249	Not Available	1126	Open in IMG/M
3300010362\|Ga0126377_10045321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3807	Open in IMG/M
3300010362\|Ga0126377_12216231	Not Available	626	Open in IMG/M
3300010366\|Ga0126379_12157623	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300010366\|Ga0126379_12806681	Not Available	583	Open in IMG/M
3300010366\|Ga0126379_13499336	Not Available	526	Open in IMG/M
3300010376\|Ga0126381_100758003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1391	Open in IMG/M
3300010376\|Ga0126381_101380348	Not Available	1018	Open in IMG/M
3300010398\|Ga0126383_10947745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	948	Open in IMG/M
3300010398\|Ga0126383_11132915	Not Available	872	Open in IMG/M
3300010398\|Ga0126383_11367239	Not Available	798	Open in IMG/M
3300010398\|Ga0126383_11890518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300010398\|Ga0126383_12023366	Not Available	663	Open in IMG/M
3300010398\|Ga0126383_13217464	Not Available	533	Open in IMG/M
3300010398\|Ga0126383_13249613	Not Available	531	Open in IMG/M
3300012353\|Ga0137367_10575884	Not Available	789	Open in IMG/M
3300012354\|Ga0137366_10417078	Not Available	976	Open in IMG/M
3300012948\|Ga0126375_10659026	Not Available	809	Open in IMG/M
3300012948\|Ga0126375_11287730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300012948\|Ga0126375_11947082	Not Available	518	Open in IMG/M
3300012971\|Ga0126369_13322167	Not Available	527	Open in IMG/M
3300015371\|Ga0132258_12860135	All Organisms → cellular organisms → Bacteria → Acidobacteria	1201	Open in IMG/M
3300015371\|Ga0132258_13306241	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300015374\|Ga0132255_103092160	Not Available	710	Open in IMG/M
3300021560\|Ga0126371_12032700	Not Available	692	Open in IMG/M
3300027873\|Ga0209814_10125334	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300027874\|Ga0209465_10011100	All Organisms → cellular organisms → Bacteria → Acidobacteria	4005	Open in IMG/M
3300027874\|Ga0209465_10012480	All Organisms → cellular organisms → Bacteria → Proteobacteria	3802	Open in IMG/M
3300027880\|Ga0209481_10745139	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300027909\|Ga0209382_10909235	Not Available	926	Open in IMG/M
3300027909\|Ga0209382_11150205	Not Available	797	Open in IMG/M
3300027909\|Ga0209382_11576272	Not Available	650	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.96%
Host-Associated	Host-Associated	24.04%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.96%
Plants	Host-Associated → Plants	24.04%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.15%
Loam	Environmental → Terrestrial → Soil → Loam	29.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	28.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	39.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	28.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	21.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_08708061	2228664022	Soil	MPHFKIGERVALNGLLGELHGGEAMGTVVFIAPDRHGMDVFDEYEIAFEDSRQLRVRSFQLTHVVLTDT
INPgaii200_08720671	2228664022	Soil	MPRFKIGERVALNGLLGELHGGEAMGTVVFIAPDRHGMDVFDEYEIAFEDSRQLRVRSFQLTHVVLTDT
AF_2010_repII_A1DRAFT_100034013	3300000597	Forest Soil	MPRFRIGERVGLNGLLREMHGGEAIGTVVSITPDRHGMDGFDEYEIVFADSRKLRVRRFQLTHIVLTDDESHEKASLGS*
JGI1027J12803_1023651001	3300000955	Soil	MPRFKIGERVALNGLLGELHGGEAMGTVVFIAPDRHGMDVFDEYEIAFEDSRQLRVRSFQLTHVVLTDT*
F14TB_1028216481	3300001431	Soil	MPRFKIGERVALNGLLGELHGGEAMGTVVFIAPDRHGMDVFDEYEIAFEEXXXXXXXXXXXTHVVLTDTETHEKAASLGSQGETDLKRKP*
Ga0066398_100424392	3300004268	Tropical Forest Soil	MPCFAIGERVALKGLLGELHGGEAIGTVVFIAPDRHGMEEFDEYEIAFEDSRQLLVSSFQLTHVVLTDDGRYEKAANRGSQFVADPRKKVLTPTR*
Ga0066395_103161402	3300004633	Tropical Forest Soil	MPRFKIGERVALNGLLGELHGGDAIGTVVFIAQDKHGMDVFDEYDIAFEDSRQLRVRSFQLTHVVQTDAETHEEAARPDSQGETRP*
Ga0066395_104217571	3300004633	Tropical Forest Soil	MPRFRIGERVGLNGLLREVHGGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLTEDESHEKASLGS*
Ga0065707_110081611	3300005295	Switchgrass Rhizosphere	MPRFKIGERVALNGLLGELHGGEAMGTVVFIAPDRHGMDVFDEYEIAFEDSRQLRVRSFQLTHVVLTDAETHQEAASLDSQGETDLRREH*
Ga0066388_1004686823	3300005332	Tropical Forest Soil	MPRFKIGERVALNGVLGELHGGEAIGTIVLVAPDRHGMDVFDEYEIAFEDSRRLRVRSFQLTHIGPTDDKHEEAPNLLSQSETDLGRKPT*
Ga0066388_1004957161	3300005332	Tropical Forest Soil	IGERVALNGVLGELHGGEAIGTVVLVAPDRHGMDVFDEYEIAFEDSRHLRIRSFQLTHVVLTDDRKPERAASLGSQCETDLGC*
Ga0066388_1017755091	3300005332	Tropical Forest Soil	MPRFKIGERVALNGLLGELHGGDAIGTVVFIAQDKHGMDVFDEYDIAFEDSRQLRVRSFQLTHVVQTDAETHEEAARPDSKGEKTLG*
Ga0066388_1018267222	3300005332	Tropical Forest Soil	MRRFAIGDLVALNGLLGEINGEAIGTVVSIAPNEHGITALDEYEIAFEDSRQLRFCRFQLTHVRLNDDACSCRAVSSFSNKGM*
Ga0066388_1023207132	3300005332	Tropical Forest Soil	MPRFKIGERVALTGLLREVLGGEAMGTVVSIVPDRHGMDAFDEYEIAFEDSRQLLRFRSFQLTHVGLTDDRKPERAASLGSQCETDLGC*
Ga0066388_1028199041	3300005332	Tropical Forest Soil	MPRFKIGERVALNGLLGELHGGDSIGTVVSIEPDRHGMDAFDEYEIAFEDSRLLRVRSFQLTHVGQTDDKNHEKARK*
Ga0066388_1049457042	3300005332	Tropical Forest Soil	MPRFKIGERVALKGLLGELHGGEAIGTVVSIAPDRHGMDAFDEYEIAFEESRLLRFRSFQLTHVGLTDDKKHEKAESRSSQGRDRP*
Ga0066388_1056413221	3300005332	Tropical Forest Soil	MPRFKIGERVALKGLLREVHTGEAIGMVVSITPDRHGMDEFDEYEIAFEDSRQLRFRSFQLNPPSADRR*
Ga0066388_1068592581	3300005332	Tropical Forest Soil	MPRFAIGERVALKGLLGELHGGEAIATVVFIAPDRHGMEEFDEYEIAFEDSRQLRVRSFQLTHVVLTDDGRYEKAANRGSQFVADPRKKVLTPTR*
Ga0066905_1000777674	3300005713	Tropical Forest Soil	MPRFKIGERVALNGLLGELHGGEAIGTVVFIAPDRHGMDAFDEYEIAFEDSRQLRVRSFQLTHVVLNDDERPETQASLGSQ
Ga0066905_1001221983	3300005713	Tropical Forest Soil	MDIRTAFDLECSYRFEVLSQMPRFKIGERVALNGVLGELHGGEAIGTVVLVAPDRHGMDVFDEYEIAFEDSRHLRVRSFQLTHVGLTDDKKHEEAPSLGSQGETDLGREPT*
Ga0066905_1008674151	3300005713	Tropical Forest Soil	MPRFRIGERVGLNGLLREVHRGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRTLRVRSFQLTHIVLTEDESHEKASLGS*
Ga0066903_1007411642	3300005764	Tropical Forest Soil	MPRFKIGERVALNGILGELHGEDAIGTVVSIEADVHGMDAFDEYEIAFEDSRQLRVRSFQLTHVALTNDKNHEKATSLGSQGESDVRRKPT*
Ga0066903_1007578682	3300005764	Tropical Forest Soil	MPRFKIGERVALNGVLGELHGGEAIGTVVLVAPDRHGMDVFDEYEIAFEDSRHLRIRSFQLTHVVLTDDRKPERAASLGSQCETDLGC*
Ga0066903_1011642803	3300005764	Tropical Forest Soil	MPRFRIGERVGLNGLLREVHRGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRIRSFQLTHIVLTDDESHEKVSLGS*
Ga0066903_1012594892	3300005764	Tropical Forest Soil	MPRFKIGERVALNGLLGELHGGDAIGTVVFIAPDRHGMDVFDEYEVAFEDSRQLRVRSFQLTHIVMTDTETHDEAASLDSQPETDLGRKH*
Ga0066903_1018774862	3300005764	Tropical Forest Soil	MPRFKIGERVALNGLLGELHGGDAVGTVISIEPDRHGMDAFDEYEIAFEDSRQLRVRSFQLTHVWADRG*
Ga0066903_1024669311	3300005764	Tropical Forest Soil	MPRFRIGERVGLNGLLREMHGGEAIGRVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLTDESHEKVSLGS*
Ga0066903_1031939522	3300005764	Tropical Forest Soil	MPRFAIGERVALKGLLGERHGGEAIAAVVFIAPDRHGMDEFDEYEIAFEDSRQLRVRSFQLTHVVLTDDGRYEKAANRGSQFEADPRKKVLTPTR*
Ga0066903_1035153792	3300005764	Tropical Forest Soil	MPRFRIGERVGLNGLLREVHRGEAMGKVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLTEDESHEKASLGS*
Ga0066903_1038814903	3300005764	Tropical Forest Soil	MPRFKIGERVALTGLLREVHGGKTIGTVVSIVPDRHGMDAFDEYDIAVEDSRQLLRFRSFQLTHVGLTDDRKPERAASLGSQCETDLGC*
Ga0066903_1045149292	3300005764	Tropical Forest Soil	MPRFRIGERVGLNGLLREVHGGEAIGTVVSITPDRHGMDGFDEYEIAFENSRKLRVRRFQLTHIVLTDDESHEKASLGS*
Ga0066903_1054523281	3300005764	Tropical Forest Soil	MPRFKVGERVALNGLLGELHGPEAIGTVVFVAPDRHGMEAFDKYEIAFEDSRQLQVCSFQLTHVVIDRR*
Ga0066903_1081792182	3300005764	Tropical Forest Soil	MPRFKIGERVALKGLFREVLGEAIGTVVSIAPDSHGMDEFDEYEIAFGDSRQLRFRSFRLTHVVLTDNREARESGKPRFAK*
Ga0066903_1084439012	3300005764	Tropical Forest Soil	RVGLNGLLREMHGGEAIGTVVSITPDRHGMDGFDEYEIVFADSRKLRVRRFQLTHIVLTDDESHEKASLGS*
Ga0075417_100272282	3300006049	Populus Rhizosphere	MPRFKIGERVALNGLLGELHGGDAIGTVVLIAPDRHGMDVMDEYEIAFEDSRQLRVRSFQLTHVVLTDAETHDEAASFDSQGGTRRSE*
Ga0075428_1000218347	3300006844	Populus Rhizosphere	MPRFKIGERVALNGLLGELHGGDAIGTVVLIAPDRHGMDVMDEYEIAFEDSRQLRVRSFQLTHVVLTDAQTHDEAASFDSQGGTRRSE*
Ga0075428_1005093903	3300006844	Populus Rhizosphere	MPRFKIGERVALNGLLGELHGGDAIGTVVFIAQDKHGMDVFDEYDIAFEDSRQLRVRSFQLTHVVQTDAETHEEAARPDSQGETDLRIKQ*
Ga0075428_1008441722	3300006844	Populus Rhizosphere	MPRFRIGEHVGLNGLLREVHGGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRVRRFQLTHIVLTEDESHEKASLGS*
Ga0075421_1004650903	3300006845	Populus Rhizosphere	MPRFRIGEHVGLNGLLREVHEGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLTEDESHEKASLGS*
Ga0075421_1014140061	3300006845	Populus Rhizosphere	MPRFKIGERVALNGLLGELHGGEAMGTVVFIAPDRHGMDVFDEYEIAFEDSRQLRVRSFQLTHIVLTDAETHEEAA
Ga0075421_1020670661	3300006845	Populus Rhizosphere	MPRFAIGERVALKGLLGELHGGEAIGTVVFIAQDRHGMDEFDEYEIAFEDSRRLRVRSFQLTHVVLTRWEVRESSEPRFAI*
Ga0075431_1016708611	3300006847	Populus Rhizosphere	MPRFKIGERVALNGLLGELHGGEAMGTVVFIAPDRHGMDVFDEYEIAFEDSRQLRVRSFQLTHVVLTDAETHEEAASLDSQGETDLRREH*
Ga0075429_1010089872	3300006880	Populus Rhizosphere	PRFTIGERVALNGLLGELHGGEAIGTVLFIAPDRHGMDAFDEYEIAFEDSRKLRVRSFQLTHVVLTADKRH*
Ga0075436_1008610071	3300006914	Populus Rhizosphere	MPRFKIGERVALNGLLGELHGGDAIGTVVLIAPDRHGMDVMDEYEIAFEDSRQLRVRSFQLTHVVLTDAETHDEAASFDSQGGT
Ga0075419_107084461	3300006969	Populus Rhizosphere	MPRFKIGERVALNGLLGELHGGDAIGTVVFIAQDKHGMDVFDEYDIAFEDSRQLRVRSFQLTHVVLTDAQTHDEAASFDSQGGTRRSE*
Ga0075419_107789151	3300006969	Populus Rhizosphere	MPRFTIGERVALNGLLGELHGGEAIGTVLFIAPDRHGMDAFDEYEIAFEDSRKLRVRSFQLTHIVLTEDESHEKASLGS*
Ga0111539_114828901	3300009094	Populus Rhizosphere	MPRFTIGERVALNGLLGELHGGEAIGTVLFIAPDRHGIDAFDKYEIAFEDSRKLRVRSFQLTHVVLTADSRH*
Ga0075418_117840551	3300009100	Populus Rhizosphere	MPRFTIGERVALNGLLGELHGGEAIGTVLFIAPDRHGMDAFDEYEIAFEDSRKLRVRSFQLTHVVLTADKRH*
Ga0075418_118151571	3300009100	Populus Rhizosphere	MPRFRIGERVGLNGLLREVHEGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLTEDESHEKASLGS*
Ga0114129_102959973	3300009147	Populus Rhizosphere	MPRFKIGERVALNGLLGELHGGEAMGTVVFIAPDRHGMDVFDEYEIAFEDSRQLRVRSFQLTHIVLTDAETHEEAASLDSQGETDLRREH*
Ga0114129_121266711	3300009147	Populus Rhizosphere	MPRFTIGERVALNGLLGELHGGEAIGTVLFIAPDRHGMDAFDEYEIAFEDSRKLRVRSFQLTHVVLTADSRH*
Ga0126380_101487841	3300010043	Tropical Forest Soil	MPRFRIGERVGLNGLLREVHGGAAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRVRRFQLTHIVLTEESHEKASLSS*
Ga0126380_105691681	3300010043	Tropical Forest Soil	MPRFKIGERVALTGHLREVLGGEAIGTVVSIVPDRHGMDAFDEYEIAFEDSRQLLRFRRFRLTQVGLTDHRKHERAASLGSPCETDLGC*
Ga0126380_107915842	3300010043	Tropical Forest Soil	MPRFKIGERVALNGVLGELHGGEAIGTVVLVAPDRHGMDVFDEYEIAFEDSRQLRVRSFQLTHVRLADDEKEEKAPSPGSQGEADPGRKPT*
Ga0126384_104883432	3300010046	Tropical Forest Soil	MPRFRIGERVGLNGLLREMHGGEAIGRVVSITPDRHGMDGFDEYEIVFADSRKLRVRRFQLTHIVLTDDESHEKASLGS*
Ga0126384_106664842	3300010046	Tropical Forest Soil	MPRFKIGERVALNGLLGELHGGDAIGTVVFIAQDKHGMDVFDEYDIAFEDSRQLRVRSFQLTHVVQTDAETHEEAARPDSQGETTLG*
Ga0126384_109814292	3300010046	Tropical Forest Soil	MPRFKIGERVALTGLLREVLGGEAIGTVVSIVPDRHGMDAFDEYEIAFEDSRQLLRFRRFQLTHLGLTDDRKPERAAGLGSQCKTDLDC*
Ga0126384_118029791	3300010046	Tropical Forest Soil	MPRFKIGERVALTGLLREVHGGETIGTVVSIVPDRHGMDAFDEYEIAFEDLRQLLRFRSFQLTHVGLIDD
Ga0126384_121120651	3300010046	Tropical Forest Soil	MPRFRIGERVGLNGLLREVHRGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLTDESHEKVSLGS*
Ga0126382_103598702	3300010047	Tropical Forest Soil	MPRFKIGERVALNGLLGELHGGEAIGTVVFIAPDRHGMDAFDEYEIAFEDSRQLRVRSFQLTHVVLNDDERPETQASLGSQGDTDLRKKH*
Ga0126382_105892912	3300010047	Tropical Forest Soil	MPRFKIGERVALKGLLREVHSGEAIGMVVSITPDRHGMDEFDEYEIAFEDSRQLRFRSFQLNPPSADRR*
Ga0126382_106296902	3300010047	Tropical Forest Soil	MPRFKIGERVALNGVLGELHGGEAIGTVVLVAPDRHGMDVFDEYEIAFEDSRHLRVRSFQLTHVGLTDDKKHEEAPSLGSQGETDLGREPT*
Ga0126382_106541551	3300010047	Tropical Forest Soil	MPRFKIGERVALKGLLGELHGGEAIGTVVSIAPDRHGMDAFDEYEIAFKESRLLRFRSFQLNPPSADRR*
Ga0126382_119042622	3300010047	Tropical Forest Soil	MPRFKIGERVALNGVLGELHGGAAIGTVVFITPDRHGMDAFDEYEIAFEDSRQLRVRSFQLTHVGQTDDKNHEKARK*
Ga0126370_109540422	3300010358	Tropical Forest Soil	MFVEVRRFKSMPRFKIGERVALNGLLGELHGGDAIGTVVFIAPDRHGMDVFDEYEVAFEDSRQLRVRSFQLTHIVMTDTETHDEAASL
Ga0126370_112066751	3300010358	Tropical Forest Soil	MPRFAIGERVALKGLLGELHGGEAIATVVFIAPDRHGMDEFDEYEIAFEDSRQLRVRSFQLTHVVLTDDGRYEKAANRASQFEADPRKKVLTPTR*
Ga0126376_116496062	3300010359	Tropical Forest Soil	MPRFRIGERVGLNGLLREVHRGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLAEDESHEKASLVFVGETHLGRKPT*
Ga0126376_125255001	3300010359	Tropical Forest Soil	MPRFKIGERVALNGVLGELHGGDSIGTVISIEPDRHGMDAFDKYGIAFEDSRQLRVRSFQLTHV
Ga0126372_104049102	3300010360	Tropical Forest Soil	MPRFAIGERVALKGLLGELHGGEAIATVVFIAPDRHGMDEFDEYEIAFEDSRQLRVRSFQLTHVVLTDDGRYEKAANRGSQFEADPRKKVLTPTR*
Ga0126372_114161061	3300010360	Tropical Forest Soil	MPRFKIGERVALTGLLREVLGGEAMGTVVSIVPDRHGMDAFDEYEIAFEDLRQLLRFRSFQLTHVGLTDDRKPERAASLGSQCNSDLGC*
Ga0126372_117433901	3300010360	Tropical Forest Soil	MPRFRIGERVGLNGLLREVHRGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLTEDESHEKASLGS*
Ga0126372_127098842	3300010360	Tropical Forest Soil	MPRFKLGERVALNGLLGELHGGEAIGTVVFVVPDRHGMDVFDEYGIAFEDSRQLRVRSFQLTHVVLTSMARS*
Ga0126378_106992492	3300010361	Tropical Forest Soil	MPRFRIGERVGLNGLLREMHGGEAIGRVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLTEDESHEKASLGS*
Ga0126377_100453212	3300010362	Tropical Forest Soil	MPRFKIGERVALNGVLGELHGGEAIGTVVLVAPDRHGMDVFDEYEIAFEDSRQLRVRSFQLTHVRLADDKKEEKAPSLGSQGETDLGIKPT*
Ga0126377_122162311	3300010362	Tropical Forest Soil	MPRFKIGERVALTGLLREVHGGETIGTVVSIVPDRHGMDAFDEYEIAFEDSRQLLRFRSFRLTHGGLTDDRQPERAASLGSQCETDLGC*
Ga0126379_121576232	3300010366	Tropical Forest Soil	MPRFKIGERVALNGVLGELHGGEAIGTVVLVAPDRHGMDVFDEYEIAFEDSRLLRFRGFQLTHVGLRDDKKHEKTGSLGSQGEIDL
Ga0126379_128066811	3300010366	Tropical Forest Soil	MPRFKIGERVALTGLLREVHEGATIGTVISIVPDRHGMDAFDEYEIAFEDSRQLLRFRSFRLTHGGLTDDRQPERAASLGSHCETDLDC*
Ga0126379_134993361	3300010366	Tropical Forest Soil	MARFKIGERVALNGILGELHGEDAIGTVVSIEADVHGMDAFDEYEIAFEDSRQLRVRSFQLTHVALTN
Ga0126381_1007580032	3300010376	Tropical Forest Soil	MPRFKIGERVALNGLLGELHGGDAIGTVVFIAQDKHGMDVFDEYDIAFEDSRQLRVRSFQLTHVMLTDAETQKAASLASQSETDLGRKH*
Ga0126381_1013803481	3300010376	Tropical Forest Soil	MPRFRIGERVGLNGLLREMHGGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLTDESHEKVSLGS*
Ga0126383_109477452	3300010398	Tropical Forest Soil	GERVGLNGLLREMHGGEAIGTVVSITPDRHGMDGFDEYEIAFEDSRKLRVRRFQLTHIVLTEDESHEKASLGS*
Ga0126383_111329151	3300010398	Tropical Forest Soil	MPRFAIGERVALKGLLGELHGGEAIATVVFIAPDRHGMDEFDEYEIAFEDSRQLRVRSFQLNHVVLTD
Ga0126383_113672391	3300010398	Tropical Forest Soil	MPRFKIGERVALTGLLREVLGGEAIGTVVSIVPDRHGMDAFDEYEIAFEGSRQLLRFRRFRLTHVGLTNDRKPERAASLGSQCETDLGC*
Ga0126383_118905182	3300010398	Tropical Forest Soil	MPRFKIGERVALKGLLREVHTGEAIGMVVSITPDRHGMDEFDEYDIAFEDSRQLRFRSFQLNPPSADRR*
Ga0126383_120233661	3300010398	Tropical Forest Soil	VALTGLLREVHGGETIGTVVSIVPDRHGMDAFDEYEIAFEDSRQLLRFRSFRLTHGGLTDDRQPERATSLGSHCETDLDC*
Ga0126383_132174641	3300010398	Tropical Forest Soil	MFGERRRSKSIPRFKLGERVALNGLLGELHGGEAIGTVVLIVPDRHGMDVFDEYGIAFADSRQLRVRSFQLTHVMLTTAETHEKTGSLGSQCVTDLRRKH*
Ga0126383_132496131	3300010398	Tropical Forest Soil	MPRFKVGERVALNGLLGELHGPEAIGTVVLVAPDRHGMEAFDKYEIAFEDSRQLQVCSFQLTHVVIDRR*
Ga0137367_105758841	3300012353	Vadose Zone Soil	MPRFKIGERVALNGLLGELHGGEAMGTVVFIAPDRHGMDVFDEYEIAFEDSRQLRVRSFQLTHVVLTDSETNEKATSLGSQGETELKRKP*
Ga0137366_104170782	3300012354	Vadose Zone Soil	MPRFAIGERVALKGLLGELHGGEAIGTVVFIAPDRHGMDEFDEYEIAFEDSRQLRLCRFQLTHVGLTNNKERG*
Ga0126375_106590261	3300012948	Tropical Forest Soil	MRRFAIGDLVALNGLLGEINGEAIGTVVSIAPNEHGITALDEYEIAFEDSRQLRFCRFQLTHVGLNDDACNWLGVLE*
Ga0126375_112877302	3300012948	Tropical Forest Soil	MPRFKIGERVALNGLLGELHGGDAIGTVVFIAQDKHGMDVFDEYDIAFEDSRQLRVRSFQLTHVVQTDAETHEEAARP
Ga0126375_119470821	3300012948	Tropical Forest Soil	MPRFAIGERVALKGLLRELHGGEAIATVVFIAPDRHGMDEFGEYEIAFEDSRQLRVRGFQLTHVAPTDDGRYEKAANRGSQFEA
Ga0126369_133221672	3300012971	Tropical Forest Soil	MPRFKIGERVALKGLFREVHSGEAIGTVVSIAPDSHGMDEFDEYEIAFGDSRQLRFRSFRLTHVVLTDNREARESGKPRFAK*
Ga0132258_128601352	3300015371	Arabidopsis Rhizosphere	MPRFRIGERVGLNGLLREMHGGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLTDDESHEKASLGS*
Ga0132258_133062412	3300015371	Arabidopsis Rhizosphere	MPRFKIGERVALNGLLGELHGGDAIGTVVFIAPDRHGMDVFDEYEVAFEDSRQLRVRSFQLTHVVLTDTETHDEAASFDSQPETDLGRKH*
Ga0132255_1030921602	3300015374	Arabidopsis Rhizosphere	MPRFRIGERVGLNGLLREMHGGEAIGTVVSITPDRHGMDGFDEYDIVFEDSRKLRVRSFQLTHVVLTADSRH*
Ga0126371_120327001	3300021560	Tropical Forest Soil	MPRFRIGERVGLNGLLREVHGGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRIRSFQLTHIVLTDDESHEKVSLGS
Ga0209814_101253342	3300027873	Populus Rhizosphere	MPRFKIGERVALNGLLGELHGGDAIGTVVLIAPDRHGMDVMDEYEIAFEDSRQLRVRSFQLTHVVLTDAETHDEAASFDSQGGTRRSE
Ga0209465_100111002	3300027874	Tropical Forest Soil	MPRFRIGERVGLNGLLREVHRGEAIGTVVSITPDRHGMDGFDEYEIAFENSRKLRVRRFQLTHIVLTDDESHEKASLGS
Ga0209465_100124805	3300027874	Tropical Forest Soil	MPRFKIGERVALNGLLGELHGGDAIGTVVFIAQDKHGMDVFDEYDIAFEDSRQLRVRSFQLTHVVQTDAETHEEAARPDSQGETRP
Ga0209481_107451391	3300027880	Populus Rhizosphere	MPRFKIGERVALNGLLGELHGGDAIGTVVFIAQDKHGMDVFDEYDIAFEDSRQLRVRSFQLTHVVLTDAQTHDEAASFDSQGGTRRSE
Ga0209382_109092352	3300027909	Populus Rhizosphere	MPRFAIGERVALKGLLGELHGGEAIGTVVFIAQDRHGMDEFDEYEIAFEDSRRLRVRSFQLTHVVLTRWEVRESSEPRFAI
Ga0209382_111502051	3300027909	Populus Rhizosphere	MPRFRIGEHVGLNGLLREVHEGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLTEDESHEKASLGS
Ga0209382_115762721	3300027909	Populus Rhizosphere	MPRFTIGERVALNGLLGELHGGEAIGTVLFIAPDRHGMDAFDEYEIAFEDSRKLRVRSFQLTHVVLTADKRH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098243

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences