Metagenome Family F098250

Basic Information
Family ID	F098250
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	64 residues
Representative Sequence	MTKVLAVILAAAVLPAFAPAARAQNLDDTFRKVSPFVVVVRSKGRDVGASGVTRFNETGSGVL
Number of Associated Samples	91
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (17.308 % of family members)
Environment Ontology (ENVO)	Unclassified (37.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.154 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 26.37% β-sheet: 15.38% Coil/Unstructured: 58.24%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01551	Peptidase_M23	7.69
PF00496	SBP_bac_5	5.77
PF09350	DJC28_CD	3.85
PF11769	DUF3313	2.88
PF01642	MM_CoA_mutase	1.92
PF04392	ABC_sub_bind	1.92
PF02687	FtsX	1.92
PF04545	Sigma70_r4	1.92
PF00723	Glyco_hydro_15	1.92
PF00923	TAL_FSA	0.96
PF00994	MoCF_biosynth	0.96
PF08264	Anticodon_1	0.96
PF06965	Na_H_antiport_1	0.96
PF02538	Hydantoinase_B	0.96
PF09917	DUF2147	0.96
PF00903	Glyoxalase	0.96
PF01156	IU_nuc_hydro	0.96
PF04461	DUF520	0.96
PF02371	Transposase_20	0.96
PF03886	ABC_trans_aux	0.96
PF04972	BON	0.96
PF08327	AHSA1	0.96
PF01702	TGT	0.96
PF00589	Phage_integrase	0.96
PF00005	ABC_tran	0.96
PF01653	DNA_ligase_aden	0.96
PF00484	Pro_CA	0.96
PF13441	Gly-zipper_YMGG	0.96
PF02518	HATPase_c	0.96
PF08386	Abhydrolase_4	0.96
PF12697	Abhydrolase_6	0.96
PF06863	DUF1254	0.96
PF14707	Sulfatase_C	0.96
PF12973	Cupin_7	0.96
PF03061	4HBT	0.96
PF00561	Abhydrolase_1	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	1.92
COG1884	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Lipid transport and metabolism [I]	1.92
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.92
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	1.92
COG0176	Transaldolase/fructose-6-phosphate aldolase	Carbohydrate transport and metabolism [G]	0.96
COG0272	NAD-dependent DNA ligase	Replication, recombination and repair [L]	0.96
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.96
COG0343	Queuine/archaeosine tRNA-ribosyltransferase	Translation, ribosomal structure and biogenesis [J]	0.96
COG1549	Archaeosine tRNA-ribosyltransferase, contains uracil-DNA-glycosylase and PUA domains	Translation, ribosomal structure and biogenesis [J]	0.96
COG1666	Cyclic di-GMP-binding protein YajQ, UPF0234 family	Signal transduction mechanisms [T]	0.96
COG1957	Inosine-uridine nucleoside N-ribohydrolase	Nucleotide transport and metabolism [F]	0.96
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.96
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.96
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.96

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.96%
Host-Associated	Host-Associated	24.04%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.23%
Plants	Host-Associated → Plants	24.04%
Aquatic	Environmental → Aquatic	6.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.54%
Marine	Environmental → Aquatic → Marine	3.85%
Sediment	Environmental → Aquatic → Sediment	1.92%
Freshwater	Environmental → Aquatic → Freshwater	0.96%
Peat	Environmental → Terrestrial → Peat	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.58%
Loam	Environmental → Terrestrial → Soil → Loam	9.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.65%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.81%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.31%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	11.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.81%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.96%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000709	Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA F1.4 TB amended with BrdU and acetate no abondance	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003347	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM	Host-Associated	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005205	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011421	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT769_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025580	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_23318262	3300000033	Soil	MKKVFAAMLVAAMLPAFAPSPAPAQSQSLDDIFNRVSPTVVVVRAKGRDVNASGITRFNETGSGVLISSDGRVMTAA
INPhiseqgaiiFebDRAFT_1004314432	3300000364	Soil	MKKVLAVILAAALVPTFTPAVQAQSQNQSQSLDDLFTRVSPSVVVVRAKGRDVNAGGVTRFNETGSGVLI
F14TC_1006441991	3300000559	Soil	MILAAXXXPAFAPAAHAQNLDDVFRKASPTVVVVRAKGRDVNASGVIRFTETGSGVLISSDGRVMTA
F14TC_1018263392	3300000559	Soil	MRKIRVVIFALAALPVFAPAAQAQSPSEAQSQSLDDLFTRVSPTVVVVRAKGRDVAAGGITHFKETGSGVLI
KanNP_Total_F14TBDRAFT_10193561	3300000709	Soil	MKKVLAVILAAALVPAFTPAVQAQSQNQSQSLDDLFARVSPSVVVVRAKGRDVNAGGVTRFNE
JGI1027J12803_1070637831	3300000955	Soil	VLPAVAPAAQAQNLEEIFAKVSPTVVIVRSKGRDVKAAGITSFTETGSGVLISDSG
F14TB_1013067222	3300001431	Soil	MKNVLAVILAGAVLPALAPAARAQNLDDTFRKVSPFVVVVRSKGRDVGASGVTRFNETGSGVL
JGI26128J50194_10091872	3300003347	Arabidopsis Thaliana Rhizosphere	MQKSLAAVLAAAMVLSGVPAAPQAQRESLDDLFTRVSPTVVVVRAKGRDVTATGVTRFNETGSGVLISSDGRV
Ga0055438_102747102	3300003995	Natural And Restored Wetlands	MKKLLAVMFAAAVLPAFAPAAQAQNLDDLFRKVNPSVVVIKAKGRDVSAGGVTRFNE
Ga0055439_101161961	3300004019	Natural And Restored Wetlands	MKKLLAVMFAAAVLPAFAPAAQAQNLDDLFRKVNPSVVVIKAKGRDVSAGG
Ga0066683_104102012	3300005172	Soil	MKKVLAVILAAGVLPAFAPAARAQNLDDTFRKVSPFVVVVRSKGRDVGASGVTRFNETGSGVLISS
Ga0068999_100703322	3300005205	Natural And Restored Wetlands	MMAPMKRLIAAILAVGALPALVPAAQAQSLDDLFRKVNPSVVVIKAKGRDVSAGGVTRFTETGSGVLVS
Ga0066388_1081420242	3300005332	Tropical Forest Soil	VTLTAAVLTAVVPAARAQNLDEIFRKVNPSVIVVRSNGRDVGAGGITRFRETGSGVLISDRGRVM
Ga0070671_1004400841	3300005355	Switchgrass Rhizosphere	MRQRAPRKTRLTLVLAVAVLPAFAPAAQAQNLDEVFRKASPTVVVVRSKGRDVNASGVVRFTETGSGVLISDDG
Ga0070710_114818091	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VKNILSVMVVVAIVPAFAPAAQAQSPSLDDLFTRVSPTVVVVRSKGRDVSAGGVTRFN
Ga0070694_1010442651	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MRKVFPKKVLVVALAAAVLPVFAPTAQAQNQSLDDIFTRVSPTVVVVRSKGRDV
Ga0073909_102108291	3300005526	Surface Soil	MRQRAPRKTRLTLVLAVAVLPAFAPAAQAQNLDEVFRKASPTVVVVRSKGRDVNASGVVRFTETGSGVLISDDGRVMT
Ga0070697_1016422432	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKKVLAVILAAAMLPAFAPAALAQSQSLDDLFTRVSPSVVVVRSKGRDVSAGGVTR
Ga0070696_1015006181	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MKKSLVAVLAAALPALVLPALAPPAHAQNLDEVFRKVSPVVVVVRSKGRDVRVSGITHFKETGSG
Ga0068854_1013334611	3300005578	Corn Rhizosphere	MKTFLALILAAAVLPAFAPAAVAQNLEEIFRKASPTVVVVRSKGRDVGAGGVTHFKETGSGVLISDSGRVM
Ga0068858_1012043061	3300005842	Switchgrass Rhizosphere	MKTFLALILAAAVLPAFAPAAVAQNLEEIFRKASPTVVVVRSKGRDVGAGGVTH
Ga0075417_100821582	3300006049	Populus Rhizosphere	MKKALAVILAAAMSPVVASGAQAQNLDETFRKVSPFVVVVRSKGRDVGPSGIVRFNETGSGVLISRDGRVMT
Ga0075417_102855802	3300006049	Populus Rhizosphere	MKKVFVVILAAAALPAFAPAAHAQNLDDVFRKASPFVVVVRSKGRDVGASGIVRFNETGSGVL
Ga0075428_1006940622	3300006844	Populus Rhizosphere	MKKVFVVILAAAALPAFAPAAHAQNLDDIFRKASPFVVVVRSKGRDVGASGIVRFNETGSGVLIS
Ga0075428_1008180412	3300006844	Populus Rhizosphere	MRKLFAMTLAAAVLPAFAPAAQAQNLDEVFRKASPTVVVVRAKGRDVTASGITRFTETGSGVLISGDGRVM
Ga0075425_1021497552	3300006854	Populus Rhizosphere	MMKILAVTLAVAVLPAFAPTARAQNLDDIFGKVNPSVLVVRSKGRDVGAGGVTRFKETG
Ga0075435_1011789273	3300007076	Populus Rhizosphere	MNKVAAMMLAAVMLPAFAPTPAESQSLDDIFNRVSPTVVVVRSTGRDVGATGIIRFNETGSGVL
Ga0099794_103946762	3300007265	Vadose Zone Soil	MQKLLAIILAVASLSVLAPAAQAQNLDDIFREVNPSVVVVRSKGRDVSAAGITRFNETGSGVLISDSG
Ga0111538_127392241	3300009156	Populus Rhizosphere	VSVPGVAPPVHLEVHLKKLFAIVFAVAVLPSFVPPACAQHLDDTFRKVSPFVVVVRSKGRDVGASGIVRFNETGSGVLISSDG
Ga0075423_102163604	3300009162	Populus Rhizosphere	VKKIVSVLVAVAIVPAFAPAAQAQSPSLDDLFTRVSPTVVVVRSKGRDVSAGGVTRFTETGS
Ga0105104_108322652	3300009168	Freshwater Sediment	MKKTLTVMLAAAMLPALAPASAPAQSPSLDELFNRVSPTVVVVRAKGRDVKAAGVTRFNETGSGVLIS
Ga0105248_132798131	3300009177	Switchgrass Rhizosphere	MKKLVAVSVGAAVLAAFVPVAQAQSLEEVFRQVNPSVVVVRAKGRDVGAGGIFRFTETGSGVLISDVTDGSPADRA
Ga0105249_110708322	3300009553	Switchgrass Rhizosphere	MNKLLALILAAAVLPAFAPAARAQNLEEIFRKASPTVVVVRSKGRDVGAGGVTHFK
Ga0126374_102932331	3300009792	Tropical Forest Soil	MRNVLAALILVAVWPGVTPPARAQNLDDIFRKVNASVIVVRSRGRDVGAGGVTRFRETGSGVL
Ga0126373_109445261	3300010048	Tropical Forest Soil	MKILLAAILAVAALPVVSPTADAQNLEEIFYKVSPTVVVVRAKGRDVGVDGIKHFTETGSGVLISED
Ga0134088_103891171	3300010304	Grasslands Soil	MKKILAVILVAAVLPALAPAAWAQNLEDIFRKVNPSVVVVRSKGRDVSAGGVTRFN
Ga0134071_106372342	3300010336	Grasslands Soil	MKKVLAVILAAAVLPAFAPAARAQNLDDTFRTVSPFVVVVRSKGRDVGASGVTRFN
Ga0134062_106294802	3300010337	Grasslands Soil	MKVLAVILAAAALPAFAPAAQAQNLDDIFRKVNPSVIVVRAKGRDVGAGGVTRFNETGSGVVISAS
Ga0126370_113789452	3300010358	Tropical Forest Soil	MKKVFAVTLAAAVLTAVAPPARAQNLDEVFRKVNPSVIVVRSKGRDVGAGGITRFR
Ga0126377_105186672	3300010362	Tropical Forest Soil	MKKVLTVILAAIVLPALVPAAGAQNLDEIFHKVNPTVIVVRSRGRDVGAGGVTRFKEIGSGFLIS
Ga0126381_1002587423	3300010376	Tropical Forest Soil	MKKAVVVVLAAALSAFAVPALAPPARAQNLDEVFRKVSPVVVVVRSKGRDVRASGITHFNETGSGVLISPDG
Ga0134122_104176483	3300010400	Terrestrial Soil	MNKILAVVLAAAALSAFAPAARAQNLEEIFRKVNASVVVIRSKGRDVGAGGV
Ga0137462_11858951	3300011421	Soil	MKKLLGVALAAALLPAFSLEARAQNLEETFRRVSPTVVIVRAKGRDVGAGGVTSFKETGSGVLVSSDG
Ga0137389_104426761	3300012096	Vadose Zone Soil	MNKILAVILAAAVLPVFAPAAQAQNRDDIFRKVNPSVVVVRAKGRDVSAGGVTRFNETGSGVLISGS
Ga0137363_114722971	3300012202	Vadose Zone Soil	MKKVLAVILVAAVLPAFAPAARAQNLDEIFRKVNPSVIVVRSKGRDVGAGGVTRFNETGSGF
Ga0137399_103095952	3300012203	Vadose Zone Soil	MRKMLAVMLAAAVLPALAPAAGAQNLDETFRKVSPLVVVVRSKGRDVGASGITRFNETGSGVL
Ga0137380_104615711	3300012206	Vadose Zone Soil	MKKLLAVIVAVAVLPAFAPAAQAQKQLDDIFREVSPTVVVVRAKGRDVGAGGVTRFN
Ga0137378_101764561	3300012210	Vadose Zone Soil	MKVLAVILAAAVLPAFAPAARAQNLDDIFRKVNPSVIVVRSKGRDVSAAGITRFNETGSGVLISSSGR
Ga0137371_114207351	3300012356	Vadose Zone Soil	MKKLLAVIVAVAVLPAFAPAAQAQKQLDDIFREISPTVVVVRAKGRDVGTGGITRFNE
Ga0137361_100506124	3300012362	Vadose Zone Soil	MNKILCMMVVVATLPAFAPAAQAQSPSLDDLFTRVSPTVVVVRSKGRDVSPGGVTRFNETGSGVL
Ga0137361_108180701	3300012362	Vadose Zone Soil	VDELKIQPEGAMKKVLAVILAAAVLPAFAPAARAQSPSLDDLFTRVSRTVVVVRSKGRDVSAGGITRFNETGS
Ga0137390_107468363	3300012363	Vadose Zone Soil	MKKPLAVILAVAVLPAFAPAAKAQNLDDIFREVNPSVVVVRAKGRDVGAAGITRFNETGSGVLIS
Ga0137395_102187881	3300012917	Vadose Zone Soil	MLKKVLPVMAVVAAISPAFAPAPATAQSQSLDDLFNRVSPTVVVVRAKGRDVNAGGITRFNETGSGGLI
Ga0137396_109332522	3300012918	Vadose Zone Soil	MKKVLAVILAAAVLLAFAPAARAQNLDDTFRKVSPFVVVVRSKGRDVGASGVTRFNETGSGVLISSDGRVM
Ga0137359_100256493	3300012923	Vadose Zone Soil	MTNLFVLILLSAALLPAFVSAAQAQNLDEVFRKASPTVVVVRAKGRDVKAEGVTRFTETGSGVLILQ*
Ga0137419_116256852	3300012925	Vadose Zone Soil	MTKVLAVILAAAVLPAFAPAARAQNLDDTFRKVSPFVVVVRSKGRDVGASGVTRFNETGSGVL
Ga0137419_117585691	3300012925	Vadose Zone Soil	MTNLFVLILLSAALLPAFVSAAQAQTAGLDDLFTRVSPTVVVVRSKGRDVGASGVTRFNETGSGVL
Ga0126375_107521991	3300012948	Tropical Forest Soil	MKKVLTVILAAIVLPALVPAAGAQNLDEIFRRVNPSVIVVRSKGRDVGAGGVTRFNEIGS
Ga0163162_105591004	3300013306	Switchgrass Rhizosphere	MNKILAVVLAAAALSAFAPAARAQNLEEIFRKVNASVVVIRSKGRDVGAGGVTRFKETGSGV
Ga0163162_119883661	3300013306	Switchgrass Rhizosphere	VESPVKTFLALIVAAGLLPAIVPGAAAQNLDEVFRKTSPTVVVVRAKGRDVNASGVTRFAETAPGS*
Ga0157375_111498121	3300013308	Miscanthus Rhizosphere	VLAVAVLPAFAPAAQAQNLDEVFRKASPTVVVVRSKGRDVNASGVVRFTETGSGVLISDDGRV
Ga0137405_11512101	3300015053	Vadose Zone Soil	MKKVLAVILAAAVLPAFAPAARAQNLDDTFRKVSPFVVVVRSKGRDVGASGVTRFNETGSGVLISSDGRVSRVMT
Ga0137405_11531673	3300015053	Vadose Zone Soil	LKVHPEDAMKKVLAVILAAAMLPAFAPAALAQSQSLDDLFTRVSPSVVVVRSKGRDVSAGGVTRLNETGSG
Ga0134085_100970261	3300015359	Grasslands Soil	MKVLAVILAAAALPAFAPAAQAQNLDDIFRKVNPSVIVVRAKGRDVGAGGVTRFNETGS
Ga0132258_116549674	3300015371	Arabidopsis Rhizosphere	MLLVAVTLPALTPTLALAQSQSLDDLFNPVSPTVVVVRAKGRDVGAAGITRFN
Ga0132257_1015738282	3300015373	Arabidopsis Rhizosphere	MLLVAVTLPALTPTLALAQSQSLDDLFNRVSPTVVVVRAKGRDVGAAGITRFNETGSGVLISTDGRVMTA
Ga0132255_1036230702	3300015374	Arabidopsis Rhizosphere	MKKRFALALAVAVLTCFVPAARAQNLEEVFRKASPTVVVVRAKGRDVTAGGITRFTE
Ga0163161_120774232	3300017792	Switchgrass Rhizosphere	MKTFLALTLAAAVLPAFAPAAGAQSLEEIFRKVSPTVVVVRSKGRDVGAGGVTHFK
Ga0187779_104932131	3300017959	Tropical Peatland	MKKLIAAMLAATMWPAFASPAHAQNLDEIFGKVNASVIVVRSRGRDVTAGGVTRFKEIGSGF
Ga0187766_101335353	3300018058	Tropical Peatland	MKTNTILAAILAAAVVPVWAGAVSGQNLDDVFRMVNASVVVVRAHGRDVGAGGVIRFTETGSGVLVSA
Ga0184637_100605961	3300018063	Groundwater Sediment	MKTVLAVILAAAVLPAFAPAAWAQNLDDIFRKVNPSVVVVRAKGRDVSAGGVTRFNETGSGV
Ga0137408_12906783	3300019789	Vadose Zone Soil	MKKVLAVILAAAVLPAFASAARAQNLDDTFRKVSPFVVVVRSKGRDVGASGVTRFNETGSGVLISSDGR
Ga0210399_106853663	3300020581	Soil	VKKVLAVILAAAELPAFASAAEAQSLDEIFTRVSPSVVVVRSKGRDVSAEGVTHFNETG
Ga0210384_104910901	3300021432	Soil	MKNLLVGILAAAMLPAFAPAAQAQNLDDVFRKVNASVLVIRAKGRDVTAEGIIRFNETGSGVLISDRG
Ga0210138_10451292	3300025580	Natural And Restored Wetlands	MKKLLAVMFAAAVLPAFAPAAQAQNLDDLFRKVNPSVVVIKAKGRDVSAGGVTRFNETGSGVLVS
Ga0207646_101480285	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKKIPSVMVIVATLPAFAPAAQAQSPSLDDLFTRVSPTVVVVRSKGRDVSTGGVTP
Ga0207668_116456562	3300025972	Switchgrass Rhizosphere	GARMKTLLALVLAVAVLPAFAPAAQAQNLDDVFRKASPAVVVVRAKGRDVNASGVYRFTETGSGVLISGDGRVMTTRGRVGLGAPPPT
Ga0207676_116401821	3300026095	Switchgrass Rhizosphere	MSVITCCERAVHGKVPMNKVLALILAAVALPAVAPAAWAQNLEEIFRKASPTVVVVRSKGRDISAGGVTHFNETGSGVL
Ga0209438_10453282	3300026285	Grasslands Soil	MKKVLAAILAAAVLPAFAPAARAQNLDDTFRKVSPFVVVVRSKGRDVGASGVTRFNETGS
Ga0209158_13107171	3300026333	Soil	MKKLLAVILAVAVLPAFAPAARAQNLDDTFRKVSPFVVVVRSKGRDVGASGVTR
Ga0268265_103413311	3300028380	Switchgrass Rhizosphere	MQKSLAAVLAAAMVLSGVPAAPQAQRESLDDLFTRVSPTVVVVRAKGRDVMATGVTRFNETGSGVL
Ga0268264_124446642	3300028381	Switchgrass Rhizosphere	MKRLLTVALAAAVLPAFALEARAQNLEETFRRVSPSVVVVRAKGRDVGAGGVT
Ga0247820_100701301	3300028597	Soil	MKTLLALILAVAVLPAFAPAAQAQNLDDVIRKASPAVVVVRAKGRDVNASGVYRFTETGSGVLISG
Ga0310888_103973291	3300031538	Soil	MKQHAPTNTRLTLVLAVALLPVFAPAAGAQNLDEVFRKASPTVVVVRSKGRDVKASGVVHFKETGSGVL
Ga0318515_101629021	3300031572	Soil	MKKSLVVILAAALAAFALPAHAPPAGAQNLDEVFGKVSPVVVVVRSKGRDVRASGITHFNETGSGVLISPDGRH
Ga0307469_113667113	3300031720	Hardwood Forest Soil	MKKILSVMVVVATLPAFASAAQAQSPNLDDLFTRVSPTVVVVRSKGRDVSAGGITRFNE
Ga0307468_1011613482	3300031740	Hardwood Forest Soil	MPRVPISRLLAVILAAALLPVFAPAAHAQNLEEIFRKVSPSVVVVRAKGRDVGAGGVTRF
Ga0307468_1012997482	3300031740	Hardwood Forest Soil	MKRLTLVLAVAVLPAFAPAAGAQNLDEVFRKASPTVVVVRSKGRDVKASGVVHFKETGSGVLISGDGRVM
Ga0307468_1013744121	3300031740	Hardwood Forest Soil	MRKVLAVILATTTLAVVVPAAQAQNLDDTFRKVSPFVVVVRSKGRDVGASGVTRFNETGSGVLISSDGRVMT
Ga0307468_1021112421	3300031740	Hardwood Forest Soil	MNNDLALILAVAVLPAFAPAARAQSLEEIFRKVSPTVVVVRSKGRDVGAGGFTRFNETGS
Ga0307468_1023921951	3300031740	Hardwood Forest Soil	MKKALTVMLAAAMLPALAPASAPAQSQSLDELFNRVVVVRAKGREVKAAGITCFNRDP
Ga0318554_101099461	3300031765	Soil	MKKSLVVILAAALAAFALPAHAPPAGAQNLDEVFGKVSPVVVVVRSKGRDVRAS
Ga0318509_104674332	3300031768	Soil	MKKLVAVIVGVAVLPTFAPVAQAQGLEEVFRQVNPSVVVVRAKGRDVGAGGII
Ga0307473_103498611	3300031820	Hardwood Forest Soil	MKTRLALILAALVLPAFAPAAQAQNLDEVFRKASPTVVVVRAKGRDVNASGIIR
Ga0318512_102625042	3300031846	Soil	MKKSLVVILAAALAAFALPAHAPPAGAQNLDEVFGKVSPVVVVVRSKGRDVRASG
Ga0318544_101370071	3300031880	Soil	MKKALALLLAAVVPSFFSPITHAQSLDDIFRQVNPSVIVVRSKGRDVGAGGLTRFNEI
Ga0318536_101640632	3300031893	Soil	MKKSLVVILAAALAAFALPAHAPPAGAQNLDEVFGKVSPVVVVVRSKGRDVRASGITHFNETGSGVLISPDGRVMR
Ga0307470_104494801	3300032174	Hardwood Forest Soil	MLGKVLTVMVVAAILPAFVPAPARSQSQSLDDLFNRVSPTVVVVRAKGRDVGAA
Ga0307471_1002355771	3300032180	Hardwood Forest Soil	MKKILSVMVVVATLPAFASAAQAQSPNLDDLFTRVSPTVVVVRSKGRDVSAGGVTRFNETGSGVLVSS
Ga0307471_1005518254	3300032180	Hardwood Forest Soil	MKKLFAMIFAAAVLPAFAPAAHAQNLDEVFRKASPTVVVVRAKGRDVNASGFVRFTETGS
Ga0307472_1012821652	3300032205	Hardwood Forest Soil	MKQHAPTKTRLTLVLAVALLPAFAPTVQAQNLDEVFRKASPTVVVVRSKGRDVKASGIVRFTETGSGVLVSDDGRV
Ga0307472_1020272922	3300032205	Hardwood Forest Soil	MPMKVLAVILVAAVLPAFAPAARAQNLDEIFRKVNPSVIVVRAKGRDVSTSGVTRFNETGSGFLISGSGRVMTAAH
Ga0335082_116555451	3300032782	Soil	VKKVCAAILAAAVLPVFAPAVGAQSLEDIFRQVSPCVIVVRSKGRDVKSGGVTRFNETGS
Ga0326726_113166853	3300033433	Peat Soil	MKKVLAVILAVAMLPAFAPAARAQNLDDIFRKVKASVVVVRSRGRDVKAGGVTRCVEHGPGGGR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098250

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign