NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F098310

Metagenome Family F098310

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F098310
Family Type Metagenome
Number of Sequences 104
Average Sequence Length 89 residues
Representative Sequence MNNQRVDARMIHAFLASVATGIVVYLIVIRGALPLLTRRLTPEQIDWLRGAFNAHPWVVLGSITIIAALLALPVLVAFRMVYGPMKGHWRRRPL
Number of Associated Samples 88
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 17.31 %
% of genes near scaffold ends (potentially truncated) 50.00 %
% of genes from short scaffolds (< 2000 bps) 83.65 %
Associated GOLD sequencing projects 82
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (95.192 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(9.615 % of family members)
Environment Ontology (ENVO) Unclassified
(38.462 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(60.577 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 63.93%    β-sheet: 0.00%    Coil/Unstructured: 36.07%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF11578DUF3237 45.19
PF08241Methyltransf_11 26.92
PF00079Serpin 4.81
PF03069FmdA_AmdA 3.85
PF01979Amidohydro_1 0.96
PF07366SnoaL 0.96
PF01042Ribonuc_L-PSP 0.96
PF00753Lactamase_B 0.96
PF12869tRNA_anti-like 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG4826Serine protease inhibitorPosttranslational modification, protein turnover, chaperones [O] 4.81
COG2421Acetamidase/formamidaseEnergy production and conversion [C] 3.85
COG0251Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 familyDefense mechanisms [V] 0.96


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.19 %
UnclassifiedrootN/A4.81 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886006|SwRhRL3b_contig_862026All Organisms → cellular organisms → Bacteria1459Open in IMG/M
3300000559|F14TC_100998969All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300003267|soilL1_10183477All Organisms → cellular organisms → Bacteria2034Open in IMG/M
3300003319|soilL2_10096480All Organisms → cellular organisms → Bacteria1915Open in IMG/M
3300003321|soilH1_10349594All Organisms → cellular organisms → Bacteria1238Open in IMG/M
3300004114|Ga0062593_100002506All Organisms → cellular organisms → Bacteria → Proteobacteria6727Open in IMG/M
3300004114|Ga0062593_100140475All Organisms → cellular organisms → Bacteria1808Open in IMG/M
3300004114|Ga0062593_101086149All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300004156|Ga0062589_100013769All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3517Open in IMG/M
3300004156|Ga0062589_101010468All Organisms → cellular organisms → Bacteria → Acidobacteria778Open in IMG/M
3300004156|Ga0062589_101174676All Organisms → cellular organisms → Bacteria732Open in IMG/M
3300004479|Ga0062595_101267035All Organisms → cellular organisms → Bacteria → Acidobacteria660Open in IMG/M
3300004480|Ga0062592_100029489All Organisms → cellular organisms → Bacteria2678Open in IMG/M
3300005093|Ga0062594_100008568All Organisms → cellular organisms → Bacteria3499Open in IMG/M
3300005093|Ga0062594_101469635All Organisms → cellular organisms → Bacteria → Proteobacteria697Open in IMG/M
3300005206|Ga0068995_10076983All Organisms → cellular organisms → Bacteria → Acidobacteria646Open in IMG/M
3300005289|Ga0065704_10333512All Organisms → cellular organisms → Bacteria830Open in IMG/M
3300005293|Ga0065715_11156518All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300005294|Ga0065705_10023834All Organisms → cellular organisms → Bacteria2487Open in IMG/M
3300005294|Ga0065705_10478766Not Available798Open in IMG/M
3300005295|Ga0065707_10770735All Organisms → cellular organisms → Bacteria → Acidobacteria610Open in IMG/M
3300005332|Ga0066388_105936888All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300005332|Ga0066388_106279582All Organisms → cellular organisms → Bacteria → Acidobacteria600Open in IMG/M
3300005333|Ga0070677_10844310Not Available526Open in IMG/M
3300005339|Ga0070660_100787986All Organisms → cellular organisms → Bacteria799Open in IMG/M
3300005347|Ga0070668_100199151All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1644Open in IMG/M
3300005354|Ga0070675_102155972Not Available514Open in IMG/M
3300005364|Ga0070673_100642447All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria971Open in IMG/M
3300005366|Ga0070659_101117431All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300005444|Ga0070694_100473217All Organisms → cellular organisms → Bacteria993Open in IMG/M
3300005457|Ga0070662_101336807All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria617Open in IMG/M
3300005466|Ga0070685_10502931All Organisms → cellular organisms → Bacteria858Open in IMG/M
3300005545|Ga0070695_101742690All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300005547|Ga0070693_100381562All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium972Open in IMG/M
3300005564|Ga0070664_100602312All Organisms → cellular organisms → Bacteria1019Open in IMG/M
3300005713|Ga0066905_100158758All Organisms → cellular organisms → Bacteria → Acidobacteria1640Open in IMG/M
3300005841|Ga0068863_102367797All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium541Open in IMG/M
3300005843|Ga0068860_101206885All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300005843|Ga0068860_101580227All Organisms → cellular organisms → Bacteria → Acidobacteria678Open in IMG/M
3300005937|Ga0081455_10540550All Organisms → cellular organisms → Bacteria → Acidobacteria773Open in IMG/M
3300006049|Ga0075417_10059986All Organisms → cellular organisms → Bacteria1663Open in IMG/M
3300006844|Ga0075428_100015340All Organisms → cellular organisms → Bacteria8497Open in IMG/M
3300006844|Ga0075428_100563859All Organisms → cellular organisms → Bacteria1217Open in IMG/M
3300006871|Ga0075434_100957543All Organisms → cellular organisms → Bacteria870Open in IMG/M
3300006880|Ga0075429_100273627All Organisms → cellular organisms → Bacteria1479Open in IMG/M
3300009094|Ga0111539_10327188All Organisms → cellular organisms → Bacteria1784Open in IMG/M
3300009147|Ga0114129_11115323All Organisms → cellular organisms → Bacteria987Open in IMG/M
3300009162|Ga0075423_10613466All Organisms → cellular organisms → Bacteria1147Open in IMG/M
3300010047|Ga0126382_10254800All Organisms → cellular organisms → Bacteria1288Open in IMG/M
3300010362|Ga0126377_10074864All Organisms → cellular organisms → Bacteria3023Open in IMG/M
3300010362|Ga0126377_13263674All Organisms → cellular organisms → Bacteria → Acidobacteria524Open in IMG/M
3300010397|Ga0134124_11031970All Organisms → cellular organisms → Bacteria → Acidobacteria836Open in IMG/M
3300010397|Ga0134124_11378979All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300010400|Ga0134122_10480814Not Available1119Open in IMG/M
3300011119|Ga0105246_10334972All Organisms → cellular organisms → Bacteria1234Open in IMG/M
3300012893|Ga0157284_10098657All Organisms → cellular organisms → Bacteria → Acidobacteria759Open in IMG/M
3300012948|Ga0126375_10588645All Organisms → cellular organisms → Bacteria847Open in IMG/M
3300013297|Ga0157378_11879562All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300014969|Ga0157376_10937667All Organisms → cellular organisms → Bacteria → Acidobacteria885Open in IMG/M
3300015371|Ga0132258_10033884All Organisms → cellular organisms → Bacteria11460Open in IMG/M
3300015371|Ga0132258_10360427All Organisms → cellular organisms → Bacteria3599Open in IMG/M
3300015372|Ga0132256_100066616All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3400Open in IMG/M
3300017792|Ga0163161_11855029All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium536Open in IMG/M
3300025315|Ga0207697_10430995All Organisms → cellular organisms → Bacteria → Acidobacteria585Open in IMG/M
3300025885|Ga0207653_10033203All Organisms → cellular organisms → Bacteria → Acidobacteria1673Open in IMG/M
3300025908|Ga0207643_10005644All Organisms → cellular organisms → Bacteria6690Open in IMG/M
3300025917|Ga0207660_11317847All Organisms → cellular organisms → Bacteria → Acidobacteria586Open in IMG/M
3300025918|Ga0207662_10523268All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300025920|Ga0207649_11610677All Organisms → cellular organisms → Bacteria → Acidobacteria514Open in IMG/M
3300025923|Ga0207681_10320610All Organisms → cellular organisms → Bacteria1232Open in IMG/M
3300025926|Ga0207659_10009311All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6132Open in IMG/M
3300025926|Ga0207659_11155892All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300025930|Ga0207701_10492224All Organisms → cellular organisms → Bacteria1050Open in IMG/M
3300025938|Ga0207704_11954990All Organisms → cellular organisms → Bacteria → Acidobacteria505Open in IMG/M
3300025940|Ga0207691_11742898All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300025945|Ga0207679_10447378All Organisms → cellular organisms → Bacteria → Acidobacteria1145Open in IMG/M
3300025945|Ga0207679_10656628All Organisms → cellular organisms → Bacteria949Open in IMG/M
3300026041|Ga0207639_12169231All Organisms → cellular organisms → Bacteria → Acidobacteria517Open in IMG/M
3300026088|Ga0207641_10091025All Organisms → cellular organisms → Bacteria2669Open in IMG/M
3300026095|Ga0207676_10728765All Organisms → cellular organisms → Bacteria → Acidobacteria963Open in IMG/M
3300026116|Ga0207674_10676588All Organisms → cellular organisms → Bacteria996Open in IMG/M
3300026118|Ga0207675_100001335All Organisms → cellular organisms → Bacteria24751Open in IMG/M
3300027873|Ga0209814_10126253All Organisms → cellular organisms → Bacteria1092Open in IMG/M
3300027876|Ga0209974_10103740All Organisms → cellular organisms → Bacteria995Open in IMG/M
3300027880|Ga0209481_10629943All Organisms → cellular organisms → Bacteria → Acidobacteria556Open in IMG/M
3300028380|Ga0268265_11779335All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300028381|Ga0268264_10057212All Organisms → cellular organisms → Bacteria3261Open in IMG/M
3300028381|Ga0268264_10198421All Organisms → cellular organisms → Bacteria → Acidobacteria1834Open in IMG/M
3300028381|Ga0268264_10862411All Organisms → cellular organisms → Bacteria907Open in IMG/M
3300031716|Ga0310813_10763190All Organisms → cellular organisms → Bacteria → Acidobacteria868Open in IMG/M
3300031720|Ga0307469_10773441All Organisms → cellular organisms → Bacteria → Acidobacteria878Open in IMG/M
3300031740|Ga0307468_100718358All Organisms → cellular organisms → Bacteria → Acidobacteria838Open in IMG/M
3300031820|Ga0307473_11140547Not Available576Open in IMG/M
3300031858|Ga0310892_10473378All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300031908|Ga0310900_11284877All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300032000|Ga0310903_10779958All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300032003|Ga0310897_10650005All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300032012|Ga0310902_11111038All Organisms → cellular organisms → Bacteria → Acidobacteria553Open in IMG/M
3300032122|Ga0310895_10238267All Organisms → cellular organisms → Bacteria → Acidobacteria835Open in IMG/M
3300032180|Ga0307471_103147494All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300032211|Ga0310896_10101880All Organisms → cellular organisms → Bacteria → Acidobacteria1286Open in IMG/M
3300032421|Ga0310812_10040788All Organisms → cellular organisms → Bacteria → Acidobacteria1750Open in IMG/M
3300033412|Ga0310810_10115390All Organisms → cellular organisms → Bacteria3179Open in IMG/M
3300034817|Ga0373948_0201088All Organisms → cellular organisms → Bacteria520Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil9.62%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere9.62%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere9.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil6.73%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere6.73%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.85%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.85%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere3.85%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.85%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.85%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.88%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil2.88%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.88%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.88%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.92%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.92%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.92%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.96%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.96%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.96%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.96%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.96%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.96%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.96%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.96%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.96%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886006Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300003267Sugarcane bulk soil Sample L1EnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005206Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012893Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300034817Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
SwRhRL3b_0088.000009202162886006Switchgrass RhizosphereMNNRRVNARMVRALLVSVATGVVIYLIVIRGALPLLARRLTSEQINWLRSVFNDHPRVVLGTIASIAAILALPVLVAFRIVYGSWGRNT
F14TC_10099896923300000559SoilERMIRAFLASVVTGVVVYLIVTRGALPLLTRRLTSDQIDWLRTAFDVHPWAVLGSIAFIAAILALPVLLAFRIVYGPMKGHWRRSL*
soilL1_1018347723300003267Sugarcane Root And Bulk SoilMNNQRADARMVRAVLASVATGVVIYLIATRGALPLVTRRLTSEQIDWLRSAFDAHPWVVLGSIAIIAAILASPVLIAFRMVYGPMKGPWRRS*
soilL2_1009648033300003319Sugarcane Root And Bulk SoilMNNQRVDARMVRAVLASVATGVVIYLIATRGALPLVTRRLTSEQIDWLRSAFDAHPWVVLGSIAIIAAILASPVLIAFRMVYGPMKGPWRRS*
soilH1_1034959423300003321Sugarcane Root And Bulk SoilMNTSRVDARLVRALLASVATGVVVYLLVIRGTLPLLSRRLNPEQIDWLRRVFDNHPWVVLGSIAIVAAILALPVLVAFRVVYGPMKGHWRRSL*
Ga0062593_10000250663300004114SoilMVRALLASVATGVVVYLIVIGGALPLLVRRLTPAQINWLRSAFQSHPWAVLGSIAVVAAVLASPVLLAFRIVYGPMKGQWRRRSL*
Ga0062593_10014047523300004114SoilMNSPRVDARMVRAFLASMATGVVVYLVVIRGTLPLVTRRLTPEQVDWLRRGFNDHPWMALSSVTIVALLLALPVLVAFRIVYGSWGRNT*
Ga0062593_10108614913300004114SoilGHEALHRSPMNNLRVDARMVRALLASVATGLVVYLMVNRGALPLLTRHLTSEQIDWLRGAFNAHPWIVLGGTAIVAAILALPVLVAFRIAYGPMKGHWRRRPL*
Ga0062589_10001376923300004156SoilMNNRRVDARMVRALLASVATGIVVYLIVIRGALPLLTRRMTTEQIQWLRNAFDDHAWVVLGSIAIIAAILALPVLVAFRIV*
Ga0062589_10101046813300004156SoilMNSPRVDARMVRAFLASMATGVVVYLVVIRGTLPLVTRRLTPEQVDWLRRGFNDHPWMALSSVTIVALLLALPVLVAFRIVY
Ga0062589_10117467613300004156SoilIRGALPLLTRRLTPEQIDWLRGAFNAHPWIVLGGTAIVAAILALPVLVAFRIAYGPMKGHWRRRPL*
Ga0062595_10126703513300004479SoilMNNLRIDQRMVRALLASVATGVVVYLIVIRGALPLLTRRLTSEQIDWLRTAFNNHPWVVLGSIAIIAAILALPVLVAFR
Ga0062592_10002948943300004480SoilMNNRRVDARMVRALLASVATGIVVYLIVIRGALPLLTRRMTTEQIQWLRNAFDDHAWVVLGSIAIIAAILALPVLVAFR
Ga0062594_10000856823300005093SoilMNNRRIDARMVRALLASVTTGVVIYLIVIRGALPLLTRRLTSEQIDWLRGAFNAHPWVVLGSITMIAAILALPVLVAFRIVYGPMKGHWRRRPL*
Ga0062594_10146963523300005093SoilMNNQRVNARMIQAFLASAATGIVVYLIAIRGALPLLARRLTPEQIDWLRRAFNAHPWAVFGGIAAVAAMLALPVLVAFRIAYGPMKGHWRRRPL*
Ga0068995_1007698323300005206Natural And Restored WetlandsMPRVDERRLVRALLASIATGAFVYLLVSRGVLPLLTRRLTSGHIDWLRSTFRDHPWMVLGSIAIVAAILALPVLVAFRIAYGPMRGHWRRPLY
Ga0065704_1033351223300005289Switchgrass RhizosphereRMVRALLVSVATGVVIYLIVIRGALPLLARRLTSEQINWLRSVFNDHPRVVLGTIASIAAILALPVLVAFRIVYGSWGRNT*
Ga0065715_1115651813300005293Miscanthus RhizosphereMNNRRVDARMVRALLASVATGIVVYLIVIRGALPLLTRRMTTEQIQWLRNAFDDHAWVVLGSIAIIAAILALPVLVAFRI
Ga0065705_1002383413300005294Switchgrass RhizospherePRVDARMVRALLVSVATGVVIYLIVIRGALPLLARRLTSEQINWLRSVFNDHPRVVLGTIASIAAILALPVLVAFRIVYGSWGRNT*
Ga0065705_1047876623300005294Switchgrass RhizosphereMIRALLGSIATGVVVYLIVIRGALPLLARRLTSEQIDWLRGAFHVHPWLVLTTIAMITAILALPVLVAFRMVYGPMKGHWRRRPL*
Ga0065707_1077073523300005295Switchgrass RhizosphereMNNQRVDARMIHAFLASVATGIVVYLIVIRGALPLLTRRLTPEQIDWLRGAFNAHPWIMLGGTAIVAAILALPVLVAFRIAYGPMKGHWRRRPL*
Ga0066388_10593688823300005332Tropical Forest SoilLIAIRGALPLLTRRLTPEQIDWLRGAFNVHPWVVLSGITIVAAILALPVLVAFRMAYGPMKGHWRRRPL*
Ga0066388_10627958223300005332Tropical Forest SoilMNSQRVDQQRLVRALLASTATGVVVYVIVIRAALPALTRRLTASQVDWLRDAFTIHPRVVLGSIALIAGILALPVLVAFRIVYGPMKGYWRLSARRSR*
Ga0070677_1084431013300005333Miscanthus RhizosphereMNNQRVDARMIHAFLASAATGIVVYLIAIRGALPLLTRRLTPEQIDWLRGAFNAHPWIVLGGTAIVAAILALPVLVAFRIAYGPMKGHWRRRPL*
Ga0070660_10078798623300005339Corn RhizosphereMNNRRVDARTVRALLASVTTGVVIYLIVIRGALPLLTRRLTSEQIDWLRGAFNAHPWVVLGSITMIAAILALPVLVAFRIVYGPMKGHWRRRPL*
Ga0070668_10019915113300005347Switchgrass RhizosphereVRALLASVTTGVVIYLIVIRGALPLLTRRLTSEQIDWLRGAFNAHPWVVLGSITMIAAILALPVLVAFRIVYGPMKGHWRRRPL*
Ga0070675_10215597213300005354Miscanthus RhizosphereMNNQRVDARMIHAFLASVATGIVVYLIVIRGALPLLTRRLTPEQIDWLRGAFDAHPWVVLGSITIIAALLALPVLVAFRMVYGPMKGHWRRRPL*
Ga0070673_10064244713300005364Switchgrass RhizosphereRRGLHRSPMNNRRVDARTVRALLASVTTGVVIYLIVIRGALPLLTRRLTSEQIDWLRGAFNAHPWVVLGSITMIAAILALPVLVAFRIVYGPMKGHWRRRPL*
Ga0070659_10111743113300005366Corn RhizosphereASVTTGVVIYLIVIRGALPLLTRRLTSEQIDWLRGAFNAHPWVVLGSITMIAAILALPVLVAFRIVYGPMKGHWRRRPL*
Ga0070694_10047321713300005444Corn, Switchgrass And Miscanthus RhizospherePMNNRRIDARMVRALLASVTTGVVIYLIVIRGALPLLTRRLTSEQIDWLRGAFNAHPWVVLGSITMIAAILALPVLVAFRIVYGPMKGHWRRRPL*
Ga0070662_10133680713300005457Corn RhizospherePRRRTQDGLRSQMNNRRVDARMVRALLASVATGIVVYLIVIRGALPLLTRRMTTEQIQWLRNAFDDHAWVVLGSIAIIAAILALPVLVAFRIV*
Ga0070685_1050293123300005466Switchgrass RhizosphereIAIRGALPLLTRRLTPEQIDWLRGAFNAHPWIVLGGTAIVAAILALPVLVAFRIAYGPMKGHWRRRPL*
Ga0070695_10174269013300005545Corn, Switchgrass And Miscanthus RhizosphereMNNRRVDARTVRALLASVTTGVVIYLIVIRGALPLLTRRLTSEQIDWLRGAFNAHPWVVLGSITMIAAILALPVLVAFRIVYGPLKGHWRRRPL*
Ga0070693_10038156223300005547Corn, Switchgrass And Miscanthus RhizosphereMNNQRVNARMIQAFLASAATGIVVYVIAIRGALPLLTRRLTPEQIDWLRGAFNAHPWIVLGGTAIVAAILALPVLV
Ga0070664_10060231223300005564Corn RhizosphereMATGVVVYLVVIRGTLPLVTRRLTPEQVDWLRRGFNDHPWMALSSVTIVALLLALPVLVAFRIVYGSWGRNT*
Ga0066905_10015875823300005713Tropical Forest SoilMVRALLASVATGVVLYLIVIRGVLPFLTRRLTSEQIEWLRGVFNAHPWAVLGIIATIAAILALPVMVAFRIVYGPMKGHWRRSL*
Ga0068863_10236779723300005841Switchgrass RhizosphereMNNQRVDARMIQAFLASAATGIVVYLIAIRGALPLLTRRLTPEQIDWLRGAFNAHPWIVLGGTAIVAAILALPVLVAFRIAYGPMKGHWRRRPL*
Ga0068860_10120688513300005843Switchgrass RhizosphereFLASAATGIVVYLIAIRGALPLLARRLTPEQIDWLRRAFNAHPWAVFGGIAAVAAMLALPVLVAFRIAYGPMKGHWRRRPL*
Ga0068860_10158022723300005843Switchgrass RhizosphereMNNQRVDARMIHAFLASAATGIVVYLIAIRGALPLLTRRLTPEQIDWLRGAFNAHPWIVLGGTAIVAAILALPVLVAFRIAYGPMK
Ga0081455_1054055013300005937Tabebuia Heterophylla RhizosphereMNNPRVDQRMLRALLVSVATGVVVYLVVIRGALPLLTRRLTSAQIEWLRTAFNVHPWAVLGSLAIIAAILALPVLVAFRIVYGPFARSGS*
Ga0075417_1005998633300006049Populus RhizosphereMNNRRVDERMIRAFLASVATGVVVYLIVIRGALPLVTRRLTSEQIDWLRSAFDNHPWAVLGSIAIIAAILALP
Ga0075428_100015340103300006844Populus RhizosphereMNNRRVDERMIRAFLASVATGVVVYLIVIRGALPLVTRRLTSEQIDWLRSAFDNHPWAVLGSIAIIAAILALPVLVVFRIVYGPLKRHLRRSL*
Ga0075428_10056385923300006844Populus RhizosphereMNNRRVDARMVRAFLASVAMGVVVYLIVIRGALPLLARRLTPDQVDWLRSAFDAHPWMVLGSIAMIAAILALPVLGAFRIVYGPMKNDWRRRPL*
Ga0075434_10095754313300006871Populus RhizosphereRVRIEVATGRERRGGSRSHMNNPRVDQQRTVRALLASLATGIVVYLIAIRGALPLLTQRLTAEQIDWLRRVFNDHPWMVLGGLAIVAAILALPVLAAFRIVYGPMKGHWRRSRSDRSIRSARSGRS*
Ga0075429_10027362723300006880Populus RhizosphereMNNRRVDERMIRAFLASVATGVVVYLIVIRGALPLVTRRLTSEQIDWLRSAFDNHPWAVLCSIAIIAAILALPVLVVFRIVYGPLKRHLRRSL*
Ga0111539_1032718833300009094Populus RhizosphereMNNRRVDARMVRALLASVATGIVVYLIVIRGALPLLTRRMTTEQIQWLRNAFDDHAWVVLGSIAIIAAILALPVLVAFRIVYGPMKGHWRRRPL*
Ga0114129_1111532313300009147Populus RhizosphereMTNPRLDERMVRAFLASVATGVVVYLIVIRGALPLLTRRLTAEQIDWLRRVFNDHPWMVLGGLAIVAAILALPVLAAFRIVYGPMKGHWRPSRSDRSIRSARSGRS*
Ga0075423_1061346613300009162Populus RhizosphereMTNRRVDERMVRAFLASVATGVVVYLIVIRGALPLLTRRLTAEQIDWLRRVFNDYPWAVLGSIAVVAAILALPVLVTFRIVYGPMKGHWRRSLSSWRGDT*
Ga0126382_1025480023300010047Tropical Forest SoilMVRALLASVATGVVLYLIVIRGVLPFLTRRLTSEQIEWLRGVFNAHPWAVLGSIATIAAILALPVLVAFRIVYGPMKGHWRRSL*
Ga0126377_1007486463300010362Tropical Forest SoilMNNPRVDQRIVHAFLASVATGIVVYLIVIRGALPLLTRRLTPEQIDWLHGAFNAHPWIVLGSITIIAALLALPVLVAFRMVYGPMKGHWRRRPL*
Ga0126377_1326367423300010362Tropical Forest SoilMNNQRVDQRRLVRALLASTATGVAVYLIVIRGALPVLTRRLTSRQIDWLRDAFNSHPGVVLGSIAVVAAILALPVLVAFRIVYG
Ga0134124_1103197013300010397Terrestrial SoilMNNQRVDARMIHAFLASAATGIVVYLIAIRGALPLLTRRLTPEQIDWLRGAFDAHPWVVLGSITIIAALLALPVLVAFRIAYGPMKDHWRRRPL*
Ga0134124_1137897923300010397Terrestrial SoilMNNQRVNARMIQAFLASAATGIVVYLIAIRGALPLLARRLTPEQIDWLRRAFNAHPWAVFGGIAAVAAILALPVLVAFRIAYGPMKGHWRRRPL*
Ga0134122_1048081413300010400Terrestrial SoilMNSPRVDARMVRAFLASVATAVVVYLVVIRGTLPLVTRRLTSEQVDWLRRGFNDHPWMALSSVTIVALLLALPALAAFRIVYGSWGRHT*
Ga0105246_1033497213300011119Miscanthus RhizosphereNNRRVDARMVRALLASVATGIVVYLIVIRGALPLLTRRMTTEQIQWLRNAFDDHAWVVLGSIAIIAAILALPVLVAFRIV*
Ga0157284_1009865723300012893SoilMYNRRVDARMVRALLASVATGIVVYLIVIRGALPLLTRRMTTEQIQWLRNAFDDHAWVVLGSIAIIAAILALPVLVAFRIV*
Ga0126375_1058864523300012948Tropical Forest SoilMNKRRVEARMVRALLASAATGVVVYLVVIRGALPLLTRRLTAEQIDWLRRAFADHSWVVLCTIAIIAAILALPVLVAFRIAYGPMKGHWRRRPL*
Ga0157378_1187956223300013297Miscanthus RhizosphereFLASAATGIVVYLIAIRGALPLLTRRLTPEQIDWLRGAFNAHPWVVLGSITMIAAILALPVLVAFRIVYGPMKGHWRRRPL*
Ga0157376_1093766723300014969Miscanthus RhizosphereMNNQRVDARMIHAFLASVATGIVVYLIVIRGALPLLTRRLTPEQIDWLRGAFNAHPWIVLGGTAIVAAILALPVLVAFRIAYG
Ga0132258_1003388483300015371Arabidopsis RhizosphereMNNRRVDGRMVRALLASVATGVVVYLVVIRGALPLLRRRLTSEQIDWLRSGFNDHPGLVLSSIAIIAAILALPVLVAFRIVYGPMKGHWRRSLASWRRGP*
Ga0132258_1036042753300015371Arabidopsis RhizosphereMNNRRVNARMVRALLVSVATGVVIYLIVIRGALPLLARRLTSEQINWLRSVFNDHPRVVLGTIASIAAILALPVLVAFRIVYGSWGRNT*
Ga0132256_10006661633300015372Arabidopsis RhizosphereMNNRRVNARMVRALLVSVATGVVIYLIVIRGALPLLARRLTSEQINWLRSVFNDHPRVVLGTIASIAAILALPVLVAFRIVYGSWGRKGRNT*
Ga0163161_1185502923300017792Switchgrass RhizosphereMNNRRIDARMVDALLASVTTGVVIYLIVIRGALPLLTRRLTSEQIDWLRGAFNAHPWVVLGSITMIAAILALPVLVAFRIVYGPMKGHWRRRPL
Ga0207697_1043099523300025315Corn, Switchgrass And Miscanthus RhizosphereMNNRRIDARMVRALLASVTTGVVIYLIVIRGALPLLTRRLTSEQIDWLRGAFNAHPWVVLGSITMIAAILALPVLVAFRIVYGPMKGHWRRRPL
Ga0207653_1003320333300025885Corn, Switchgrass And Miscanthus RhizosphereMNNRRIDARMVRALLASVTTGVVIYLIVIRGALPLLTRRLTSEQIDWLRGAFNAHPWVVLGSITIIAALLALPVLVAFRMVYGPMKGHWRRRPL
Ga0207643_1000564473300025908Miscanthus RhizosphereMNNRRVDARMVRALLASVATGIVVYLIVIRGALPLLTRRMTTEQIQWLRNAFDDHAWVVLGSIAIIAAILALPVLVAFRIV
Ga0207660_1131784713300025917Corn RhizosphereMNNQRVDARMIHAFLASAATGIVVYLIAIRGALPLLTRRLTPEQIDWLRGAFNAHPWVVLGSITMIAAILALPVLVAFRIVYG
Ga0207662_1052326823300025918Switchgrass RhizosphereMNNQRVDARMIHAFLASAATGIVVYLIAIRGALPLLTRRLTPEQIDWLRGAFNAHPWIVLGGTAIVAAILALPVLVAFRIAYGPMKGHWRRRPL
Ga0207649_1161067723300025920Corn RhizosphereMNSPRVDARMVRAFLASMATGVVVYLVVIRGTLPLVTRRLTPEQVDWLRRGFNDHPWMALSSVTIVALLLALLFGLRLKLAAD
Ga0207681_1032061013300025923Switchgrass RhizosphereMNNRRVDARMVRALLASVATGIVVYLIVISGALPLLTRRMTTEQIQWLRNAFDDHAWVVLGSIAIIAAILALPVLVAFRIVYGPMKGHWRR
Ga0207659_1000931123300025926Miscanthus RhizosphereMNNQRVNARMIQAFLASAATGIVVYLIAIRGALPLLARRLTPEQIDWLRRAFNAHPWAVFGGIAAVAAMLALPVLVAFRIAYGPMKGHWRRRPL
Ga0207659_1115589223300025926Miscanthus RhizosphereMNNQRVDARMIHAFLASVATGIVVYLIVIRGALPLLTRRLTPEQIDWLRGAFDAHPWVVLGSITIIAALLALPVLVAFRMVYGPMKGHWRRRPL
Ga0207701_1049222423300025930Corn, Switchgrass And Miscanthus RhizosphereGGGADRRWIGRDREPVRNNRRVDARMVRALLASVATGIVVYLIVIRGALPLLTRRMTTEQIQWLRNAFDDHAWVVLGSIAIIAAILALPVLVAFRIV
Ga0207704_1195499023300025938Miscanthus RhizosphereMNNQRVNARMIQAFLASAATGIVVYLIAIRGALPLLARRLTPEQIDWLRRAFNAHPWAVFGGIAAVAAMLALPVLVAFRIAYGPMKGHWRRR
Ga0207691_1174289823300025940Miscanthus RhizosphereNQRVNARMIQAFLASAATGIVVYLIAIRGALPLLARRLTPEQIDWLRRAFNAHPWAVFGGIAAVAAMLALPVLVAFRIAYGPMKGHWRRRPL
Ga0207679_1044737813300025945Corn RhizosphereMNNQRVDARMIHAFLASAATGIVVYLIAIRGALPLLTRRLTPEQIDWLRGAFNAHPWAALCGIAMVAAILALPVLVAFRIAYGPMKGHWRRRPL
Ga0207679_1065662813300025945Corn RhizosphereAFLASMATGVVVYLVVIRGTLPLVTRRLTPEQVDWLRRGFNDHPWMALSSVTIVALLLALPVLVAFRIVYGSWGRNT
Ga0207639_1216923113300026041Corn RhizosphereMNNQRVDARMIHAFLASAATGIVVYLIAIRGALPLLTRRLTPEQIDWLRGAFDAHPWVVLGSITIIAALLALPVLVAF
Ga0207641_1009102553300026088Switchgrass RhizosphereMNNQRVDARMIHAFLASAATGIVVYLIAIRGALPLLTRRLTPEQIDWLRGAFNAHPWVVLGSITIIAALLALPVLVAFRMVYGPMKGHWRRRPL
Ga0207676_1072876523300026095Switchgrass RhizosphereMNNQRVNARMIQAFLASAATGIVVYLIAIRGALPLLTRRLTPEQIDWLRGAFNAHPWIVLGGTAIVAAILALPVLVAFRIAYGPMKGHWRRRPL
Ga0207674_1067658833300026116Corn RhizosphereAIRGALPLLTRRLTPEQIDWLRGAFNAHPWIVLGGTAIVAAILALPVLVAFRIAYGPMKGHWRRRPL
Ga0207675_100001335213300026118Switchgrass RhizosphereMNNRRVDARTVRALLASVTTGVVIYLIVIRGALPLLTRRLTSEQIDWLRGAFNAHPWVVLGSITMIAAILALPVLVAFRIVYGPMKGHWRRRPL
Ga0209814_1012625333300027873Populus RhizosphereMNNRRVDERMIRAFLASVATGVVVYLIVIRGALPLVTRRLTSEQIDWLRSAFDNHPWAVLGSIAIIAAILALPVLVVFR
Ga0209974_1010374033300027876Arabidopsis Thaliana RhizosphereMNNRRVDARMVRALLASVATGIVVYLIVIRGALPLLTRRMTTEQIQWLRNAFDDHAWVVLGSIAIIAAILALPVLV
Ga0209481_1062994313300027880Populus RhizosphereMNNRRVDERMIRAFLASVATGVVVYLIVIRGALPLVTRRLTSEQIDWLRSAFDNHPWAVLCSIAIIAAILALPVLVVFRIVYGPLKRHLRRSL
Ga0268265_1177933523300028380Switchgrass RhizosphereMYNRRVDARMVRALLASVATGIVVYLIVIRGALPLLTRRMTTEQIQWLRNAFDDHAWVVLGSIAIIAAILALPVLVAFRIV
Ga0268264_1005721213300028381Switchgrass RhizosphereMNNQRVDARMIHAFLASAATGIVVYLIAIRGALPLLTRRLTPEQIDWLRGAFNAHPWIVLGGTAIVAAILALPVLVAFRIAYGPMKAIGVDVPYEILVPH
Ga0268264_1019842113300028381Switchgrass RhizosphereEAFIDSMNNQRVNARMIQAFLASAATGIVVYLIAIRGALPLLARRLTPEQIDWLRRAFNAHPWAVFGGIAAVAAMLALPVLVAFRIAYGPMKGHWRRRPL
Ga0268264_1086241123300028381Switchgrass RhizosphereSPMNNRRIDARMVRALLASVTTGVVIYLIVIRGALPLLTRRLTSEQIDWLRGAFNAHPWVVLGSITMIAAILALPVLVAFRIVYGPMKGHWRRRPL
Ga0310813_1076319023300031716SoilMNNQRVDARMIHAFLACAATGIVVYLIAIRGALPLLTRRLTPEQIDWLRGAFNAHPWAALCGIAMVAAILALPVLVAFRIAYGPMKGHWRRRLL
Ga0307469_1077344123300031720Hardwood Forest SoilMTNRRVDARMVRAFLASVATGVVIYLIVIRGALPLLTRRLTSEQIDWLRSVFNDHPWMVLGSIAIIAMILALPVLVAFRIVYGPMKGHWRRSLQSWRGDT
Ga0307468_10071835823300031740Hardwood Forest SoilMTNRRVDVRMVRALLASIATGVIVYLIVIRGALPLLARRLTSEQIDGLRSAFDAHPWVVLGSIAIIAAILALPVLVAFRVVYGPMKGHWRLERSERSERSERSK
Ga0307473_1114054713300031820Hardwood Forest SoilFLASVATGVVVYLIVIRGALPLVTRRLTSEQIDWLRSAFDNHPWAVLGSIAIIAAILALPVLLAFRIVYGPMKGHWRRRPL
Ga0310892_1047337823300031858SoilNNRRIDARMVRALLASVTTGVVIYLIVIRGALPLLTRRLTSEQIDWLRGAFNAHPWVVLGSITMIAAILALPVLVAFRIVYGPMKGHWRRRPL
Ga0310900_1128487723300031908SoilLIVIRGALPLLTRRLTPEQIDWLRGAFDAHPWVVLGSITIIAALLALPVLVAFRMVYGPMKGHWRRRPL
Ga0310903_1077995823300032000SoilVVIYLIVIRGALPLLTRRLTSEQIDWLRGAFNAHPWVVLGSITMIAAILALPVLVAFRIVYGPMKGHWRRRPL
Ga0310897_1065000513300032003SoilRVRIEIGRQQQTRRRGLHRSPMNNRRIDARMVRALLASVTTGVVIYLIVIRGALPLLTRRLTSEQIDWLRGAFNAHPWVVLGSITMIAAILALPVLVAFRIVYGPMKGHWRRRPL
Ga0310902_1111103813300032012SoilMNNRRIDARMVRALLASVTTGVVIYLIVIRGALPLLTRRLTSEQIDWLRGAFNAHPWVVLGSITMIAAILALPVLVAFRIVYGPMKGHWRRR
Ga0310895_1023826723300032122SoilMNNQRVDARMIHAFLASVATGIVVYLIVIRGALPLLTRRLTPEQIDWLRGAFNAHPWVVLGSITIIAALLALPVLVAFRMVYGPMKGHWRRRPL
Ga0307471_10314749423300032180Hardwood Forest SoilMNNRRVDERMIRAFLASVATGVVVYLIVIRGALPLLTRRLTSDEIEWLRTAFYAHPWAVLGGIAFIAAVLALPVLLAFRIVYGPMKGHWRSERSERFERSERSK
Ga0310896_1010188033300032211SoilMNNQRVDARMIHAFLASVATGIVVYLIVIRGALPLLTRRLTPEQIDWLRGAFDAHPWVVLGSITIIAALLALPVLVAFRMVY
Ga0310812_1004078823300032421SoilMNNQRVDARMIHAFLACAATGIVVYLIAIRGALPLLTRRLTPEQIDWLRGAFNAHPWAALCGIAMVAAILALPVLVAFRIAYGPMKDHWRRRPL
Ga0310810_1011539073300033412SoilTGIVVYLIAIRGALPLLTRRLTPEQIDWLRGAFNAHPWIVLGGTAIVAAILALPVLVAFRIAYGPMKGHWRRRPL
Ga0373948_0201088_1_2553300034817Rhizosphere SoilIHAFLASVATGIVVYLIVIRGALPLLTRRLTPEQIDWLRGAFDAHPWVVLGSITIIAALLALPVLVAFRMVYGPMKGHWRRRPL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.