Metagenome Family F098392

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098392
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	97 residues
Representative Sequence	MSVSANRIIEIKVEESYNSFNLWHDSKLMDFLDTEADFFSRLSDDGTGISEVSVEVLEKAVSMSVELELDDDTVTNLKKDIAWAKEHDEEFVQYDCY
Number of Associated Samples	33
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.67 %
% of genes near scaffold ends (potentially truncated)	15.53 %
% of genes from short scaffolds (< 2000 bps)	85.44 %
Associated GOLD sequencing projects	33
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (63.107 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen (61.165 % of family members)
Environment Ontology (ENVO)	Unclassified (62.136 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (83.495 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.60% β-sheet: 12.00% Coil/Unstructured: 54.40%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00239	Resolvase	11.65
PF13408	Zn_ribbon_recom	3.88
PF09250	Prim-Pol	1.94
PF07508	Recombinase	0.97
PF13401	AAA_22	0.97
PF13646	HEAT_2	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	12.62
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	11.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.11 %
All Organisms	root	All Organisms	36.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.11 %
cellular organisms	root	All Organisms → cellular organisms	36.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.11 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.11 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	31.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.11 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	30.10 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.11 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	26.21 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1.94 %
Negativicutes	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.11 %
unclassified Anaerolineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae	26.21 %
Veillonellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales	0.97 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	0.97 %
Dehalococcoidales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.11 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	26.21 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.97 %
Dehalococcoidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae	0.97 %
Veillonellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.11 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	26.21 %
Megasphaera	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Megasphaera	0.97 %
Dehalococcoides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides	0.97 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.11 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	26.21 %
Megasphaera cerevisiae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Megasphaera → Megasphaera cerevisiae	0.97 %
Dehalococcoides mccartyi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	0.97 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908038\|B3_all_c_ConsensusfromContig154200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1241	Open in IMG/M
3300010341\|Ga0074045_10446977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	834	Open in IMG/M
3300014151\|Ga0181539_1295674	Not Available	595	Open in IMG/M
3300014158\|Ga0181521_10053172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Megasphaera → Megasphaera cerevisiae	2772	Open in IMG/M
3300014490\|Ga0182010_10028257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2586	Open in IMG/M
3300014490\|Ga0182010_10062625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1797	Open in IMG/M
3300014490\|Ga0182010_10067061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1743	Open in IMG/M
3300014490\|Ga0182010_10342151	Not Available	808	Open in IMG/M
3300014490\|Ga0182010_10400410	Not Available	749	Open in IMG/M
3300014490\|Ga0182010_10506329	Not Available	668	Open in IMG/M
3300014490\|Ga0182010_10611392	Not Available	609	Open in IMG/M
3300014494\|Ga0182017_10067013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	2375	Open in IMG/M
3300014494\|Ga0182017_10070020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	2318	Open in IMG/M
3300014494\|Ga0182017_10144982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1538	Open in IMG/M
3300014494\|Ga0182017_10147111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1525	Open in IMG/M
3300014494\|Ga0182017_10154881	Not Available	1481	Open in IMG/M
3300014494\|Ga0182017_10156692	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M
3300014494\|Ga0182017_10274245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1061	Open in IMG/M
3300014494\|Ga0182017_10318912	Not Available	971	Open in IMG/M
3300014494\|Ga0182017_10327342	Not Available	956	Open in IMG/M
3300014494\|Ga0182017_10370700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	889	Open in IMG/M
3300014494\|Ga0182017_10419186	Not Available	827	Open in IMG/M
3300014494\|Ga0182017_10443053	Not Available	800	Open in IMG/M
3300014494\|Ga0182017_10480543	Not Available	763	Open in IMG/M
3300014494\|Ga0182017_10499016	Not Available	746	Open in IMG/M
3300014494\|Ga0182017_10511422	Not Available	736	Open in IMG/M
3300014494\|Ga0182017_10608244	Not Available	665	Open in IMG/M
3300014494\|Ga0182017_10720523	Not Available	604	Open in IMG/M
3300014494\|Ga0182017_10723736	Not Available	602	Open in IMG/M
3300014496\|Ga0182011_10003853	Not Available	12161	Open in IMG/M
3300014496\|Ga0182011_10046047	All Organisms → cellular organisms → Bacteria	3101	Open in IMG/M
3300014496\|Ga0182011_10067321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2519	Open in IMG/M
3300014496\|Ga0182011_10085410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	2207	Open in IMG/M
3300014496\|Ga0182011_10095107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	2080	Open in IMG/M
3300014496\|Ga0182011_10183421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1431	Open in IMG/M
3300014496\|Ga0182011_10239481	Not Available	1221	Open in IMG/M
3300014496\|Ga0182011_10431955	Not Available	855	Open in IMG/M
3300014496\|Ga0182011_10552835	Not Available	736	Open in IMG/M
3300014496\|Ga0182011_10581328	Not Available	714	Open in IMG/M
3300014496\|Ga0182011_10668128	Not Available	657	Open in IMG/M
3300014496\|Ga0182011_10709906	Not Available	634	Open in IMG/M
3300014496\|Ga0182011_10821665	Not Available	581	Open in IMG/M
3300014498\|Ga0182019_10760240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	691	Open in IMG/M
3300014502\|Ga0182021_10021029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	7719	Open in IMG/M
3300014502\|Ga0182021_10309324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1862	Open in IMG/M
3300014502\|Ga0182021_10339835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1773	Open in IMG/M
3300014502\|Ga0182021_10693471	Not Available	1221	Open in IMG/M
3300014502\|Ga0182021_10714490	Not Available	1202	Open in IMG/M
3300014502\|Ga0182021_10717105	Not Available	1200	Open in IMG/M
3300014502\|Ga0182021_10776823	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300014502\|Ga0182021_10973035	Not Available	1021	Open in IMG/M
3300014502\|Ga0182021_11342127	Not Available	861	Open in IMG/M
3300014502\|Ga0182021_11568317	Not Available	793	Open in IMG/M
3300014502\|Ga0182021_11607538	Not Available	783	Open in IMG/M
3300014502\|Ga0182021_11810293	Not Available	735	Open in IMG/M
3300014502\|Ga0182021_12710114	Not Available	596	Open in IMG/M
3300014502\|Ga0182021_13106996	Not Available	555	Open in IMG/M
3300014839\|Ga0182027_10135068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	2922	Open in IMG/M
3300014839\|Ga0182027_10398627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1529	Open in IMG/M
3300014839\|Ga0182027_10511528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1309	Open in IMG/M
3300014839\|Ga0182027_10517636	Not Available	1299	Open in IMG/M
3300014839\|Ga0182027_10578803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1211	Open in IMG/M
3300014839\|Ga0182027_10665801	Not Available	1108	Open in IMG/M
3300014839\|Ga0182027_10754032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1024	Open in IMG/M
3300014839\|Ga0182027_10771625	Not Available	1009	Open in IMG/M
3300014839\|Ga0182027_11025478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	843	Open in IMG/M
3300014839\|Ga0182027_12090995	Not Available	540	Open in IMG/M
3300018005\|Ga0187878_1269001	Not Available	616	Open in IMG/M
3300018040\|Ga0187862_10313876	Not Available	986	Open in IMG/M
3300022516\|Ga0224542_1002123	All Organisms → cellular organisms → Bacteria	2410	Open in IMG/M
3300022520\|Ga0224538_1041108	Not Available	514	Open in IMG/M
3300023075\|Ga0224520_1012806	Not Available	2107	Open in IMG/M
3300023075\|Ga0224520_1034026	Not Available	1207	Open in IMG/M
3300023075\|Ga0224520_1056554	Not Available	896	Open in IMG/M
3300023075\|Ga0224520_1058267	Not Available	881	Open in IMG/M
3300023075\|Ga0224520_1127432	Not Available	560	Open in IMG/M
3300023075\|Ga0224520_1150242	Not Available	508	Open in IMG/M
3300023232\|Ga0224516_1023507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	821	Open in IMG/M
3300023232\|Ga0224516_1041287	Not Available	589	Open in IMG/M
3300023232\|Ga0224516_1042422	Not Available	580	Open in IMG/M
3300023232\|Ga0224516_1054759	Not Available	501	Open in IMG/M
3300024233\|Ga0224521_1079018	Not Available	717	Open in IMG/M
3300024233\|Ga0224521_1081390	Not Available	705	Open in IMG/M
3300024233\|Ga0224521_1083516	Not Available	695	Open in IMG/M
3300024238\|Ga0224523_1053140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	996	Open in IMG/M
3300024240\|Ga0224522_1157167	Not Available	518	Open in IMG/M
3300026451\|Ga0247845_1022901	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300026474\|Ga0247846_1061786	Not Available	664	Open in IMG/M
3300028653\|Ga0265323_10040023	Not Available	1707	Open in IMG/M
3300028653\|Ga0265323_10069787	Not Available	1204	Open in IMG/M
3300030000\|Ga0311337_11900570	Not Available	523	Open in IMG/M
3300030019\|Ga0311348_10711744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	749	Open in IMG/M
3300031344\|Ga0265316_10492110	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300033402\|Ga0326728_10889271	Not Available	633	Open in IMG/M
3300033798\|Ga0334821_073801	Not Available	677	Open in IMG/M
3300033819\|Ga0334816_042627	Not Available	861	Open in IMG/M
3300033819\|Ga0334816_091641	Not Available	559	Open in IMG/M
3300033820\|Ga0334817_031424	Not Available	1072	Open in IMG/M
3300033890\|Ga0334810_004220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi	4193	Open in IMG/M
3300034070\|Ga0334822_027258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1289	Open in IMG/M
3300034070\|Ga0334822_079934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	693	Open in IMG/M
3300034091\|Ga0326724_0012648	Not Available	8394	Open in IMG/M
3300034195\|Ga0370501_0247348	Not Available	636	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.09%
Host-Associated	Host-Associated	2.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.20%
Aquatic	Environmental → Aquatic	3.88%
Plants	Host-Associated → Plants	2.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.08%
Peat	Environmental → Terrestrial → Peat	29.13%
Freshwater	Environmental → Aquatic → Freshwater	3.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.91%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	63.11%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	29.13%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	61.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	29.13%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.97%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	61.17%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	25.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.91%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.94%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.94%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.97%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.97%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908038	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300022516	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 30-34	Environmental	Open in IMG/M
3300022520	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E2 20-24	Environmental	Open in IMG/M
3300023075	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T-25	Environmental	Open in IMG/M
3300023232	Peat soil microbial communities from Stordalen Mire, Sweden - IR.F.S.T0	Environmental	Open in IMG/M
3300024233	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T0	Environmental	Open in IMG/M
3300024238	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T50	Environmental	Open in IMG/M
3300024240	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T25	Environmental	Open in IMG/M
3300026451	Peat soil microbial communities from Stordalen Mire, Sweden - P.F.S.T-25	Environmental	Open in IMG/M
3300026474	Peat soil microbial communities from Stordalen Mire, Sweden - P.F.S.T0	Environmental	Open in IMG/M
3300028653	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG	Host-Associated	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033798	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-3-S	Environmental	Open in IMG/M
3300033819	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-2-M	Environmental	Open in IMG/M
3300033820	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-2-D	Environmental	Open in IMG/M
3300033890	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-M	Environmental	Open in IMG/M
3300034070	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-3-M	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B3_all_c_00414020	2124908038	Soil	VEDILMSVSANRIIEIKVEESYNTFNLWHDRKLMDFLDEEAAFFNQLTADGTGVSEAPVEILEKAVSMSVELELDDDTVTNLKKDIGWAKEHNEEFVQYYCY
Ga0074045_104469772	3300010341	Bog Forest Soil	MSVSANRIIEIKVEESYNSFNLWHDRKLMDFLDEEANFFSRLSDDGAGVSEVSVEVLEKAVSMSVELELDADTVTNLKKDIAWAKANDQEFVQYDCY*
Ga0181539_12956741	3300014151	Bog	MSVLARRIIEIRTEKKYISFNLWHNKKLMDFLDTEADFCSQLTNDGTGIAEASVEVLENAVSKAVELELGTDIVANLKKDIAWAKAHNQEFIQYYCY*
Ga0181521_100531723	3300014158	Bog	MSVLARRIIEIRTEKKYISFNLWHNKKLMDFLDTEADFCNQLTNGGTGIAEASVEVLENAISKAVELELATDIVANLKKDIAWAKAHNQEFIQYYCY*
Ga0182010_100282574	3300014490	Fen	MSVIARRIIEIKIETEYNSFNLWHDRKLMDFLDTEANFYSGLTDDGTGVAEASVEVLENAVSKAVELELDDDTVANLKKDIAWAKANDEEFVQYYCY*
Ga0182010_100626252	3300014490	Fen	VVKIIDTPYPQLIIKEDILMSISAHRIIEIKIEETYNSFNLWHDRKLMDFLDTEAGFYSSLSDDGTGVSEVSVEVLEKAVSMAVELELDDDTVANLKKDIAWAKEHDEEFVQYYCY*
Ga0182010_100670612	3300014490	Fen	MSVSANRIIEIKVEESYNTFNLWHDSKLMDFLDTEADFFSRLSDDGTGISEVSVEVLEKAVSMSVELELDDDTVTNLKKDIAWAKEHDEEFVQYDCY*
Ga0182010_103421511	3300014490	Fen	IEIKIETEYNSFNLWHDSKLMDFLDAEANFFSQLTADGTGVSEASVEVLEKAVSMAIELELDADTVTNLKKDIAWAREHNEVNVQYYCY*
Ga0182010_104004101	3300014490	Fen	MSVHANRIIKIEIEESYNSFNLWHDTKLMDFLEDEANFFSRLSDDGNGVSEVSVEVLENAVSKAIELELDADTVANLKKDIAWAKEHNEVNVQYYCY*
Ga0182010_105063291	3300014490	Fen	MSVSANRIIKIEVEESYNSFNLWHDRKLMDFLDAEANFFSRLSDDGSGVSEISVEILEKAVSMAVELELDADTIAHIKLDIAWAKANDQEFVQYDCY*
Ga0182010_106113921	3300014490	Fen	MSVSANRIIEIKIETEYNSFNLWHDRKLMDFLDTEADFFSQLNADGTGISEVSVEVLENAISKAVELELDADTVTNLKKDIAWAKEHKEEFVEYYCY*
Ga0182017_100670134	3300014494	Fen	LREDILMSISANRIIEIKVEESYNSFNLWHDRKLMDFLDEEANFFSRLSDDGSGVSEVSIEILEKAVSMSVELELDADTVANLKKDIAWAKTNDQEFVQYDCY*
Ga0182017_100700203	3300014494	Fen	MSVSANRIIEIKVEENYNSFNLWHDRKLMDFLDTEANFFSRLSDDGAGVSEVSVEVLEKAVSMAVELELDADTVAHIKLDIAWAKEHDDEFVQYDCY*
Ga0182017_101449822	3300014494	Fen	VEGIQMSVHANRIIKIEIEESYNTFNLWHDRKLMDFLDSEADFFSQLTADGTGVSEASVEVLEDAISKAVELELDDDTVANLKKDIAWAKEHDQEFVQYSCY*
Ga0182017_101471112	3300014494	Fen	MSVSANRIIEIKVEESYNSFNLWHDRKLMDFLDEEANFFSRLSDDGAGVSEVSVEVLEKAVSMSVELELDAGTIANLKKDIAWAKANDQEFVQYDCY*
Ga0182017_101548812	3300014494	Fen	MSVIAHRIIEIKIETEYHSFNLWHDRKLMDFLDTEAGFFNQLTADGTGISEVPVEVLEKAVSKAIELELDEDTIANLKKDVVWANEHNEVSVQYDCY*
Ga0182017_101566924	3300014494	Fen	MSVSANRIIEIKIEQSYNSFNLWHDRKLMDFLDTEADFFSQLTADGTGISEVSVEVLENAISKAVELELDADTVANIKKDIAWAKEHKEEFVEYYCY*
Ga0182017_102742452	3300014494	Fen	MSVSANRIIEIKVEESYNTFNLWHDRKLMDFLDTEADFFSRLSDDGTGISEVSVEVLEKAVSMAIELELDDDTVTNLRKDIAWAKANDQEFVQYDCY*
Ga0182017_103189123	3300014494	Fen	MSVSANRIIEIKVEESYNSFNLWHDRKLMDFLDEEANFFSRLSDDGAGVSEVSVEILEKAVSMPVELELDADTVANLKKDIAWAKANDQEFVQYDCY*
Ga0182017_103273421	3300014494	Fen	MSVRANRIIEIKIETEYNSFNLWHDKKLMEFLDTEANFYSGLTNDGTGVAEASVEVLENAVSKAVELELDDDTIINLKKDIAWAKEHDEEFVQYDCY*
Ga0182017_103707002	3300014494	Fen	MSVSANRIIEIKVEESYNSFNLWHDRKLMDFLDEEANFFSRLSDDGAGVSEVSVEILEKAVSMSVELELDADTVANLKKDIVWAKANDQEFVQYDCY*
Ga0182017_104191863	3300014494	Fen	MSVIARRIIEIKIETEYNSFNLWHDRKLMDFLDTEGDFFSQLTADGTGVSEASVEVLEKAVSMAIELELDADTVTNLKKDIAWAKEHDEEFVQYYCY*
Ga0182017_104430531	3300014494	Fen	MSVIAHRIIEIKIETEYHSFNLWHDRKLMDFFDTEADFFSQLSFDGTGISEVPVEVLEGAVSKAVELELDEDTIANLKKDIAWAGEHNEVSVQYDCY*
Ga0182017_104805432	3300014494	Fen	MSVIARRIIEIKIETEYNSFNLWRDTKLRDFLDSEADFFSQLTTDGTGVSEASVEVLEKAVSMAIELELDDDTVANLKKDIAWAKENNEEFVQYYCY*
Ga0182017_104990163	3300014494	Fen	RALVGEVPTEIHIKENILMSVSANRIIEIKMEESYNSFNLWHDSKLMDFLDTEADFFNRLSDDGTGVSEVSVEILEKAVSMAIELELDADTISNLKKDITWAKANDQEFIQYDCY*
Ga0182017_105114222	3300014494	Fen	SVPFPVIILREDILMSISANRIIKIEVEESYNSFNLWHDRKLMDFLDTEADFFSRLSDDGAGVSEISVEVLEKAVSMAVELELDADTVTNLKKDIAWAKANDQEFVQYDCY*
Ga0182017_106082441	3300014494	Fen	NRIIEIKVEESYNSFNLWHDRKLMDFLDEEANFFSRLSDDGAGVSEISVEILEKAVSMSVELELDADTVSNLKKDIAWAKANDDEFVQYDCY*
Ga0182017_107205231	3300014494	Fen	MSVIARRIIEIKTETEYDSFNLWHDGKLMEFLDDEANFFSQLTDDGTGVSEASVEVLEKAVSMAVELELDEDTISNLKKDIAWAKANDEEFVQYYCY*
Ga0182017_107237362	3300014494	Fen	MSVIAHRIIEIKIETEYHSFNLWHDRKLMDFFDTEADFFSQLSFDGTGITEVPVEVLEGAISKAVELELDEDTIANLKKDIAWAGEHNEASVQYDCY*
Ga0182011_1000385316	3300014496	Fen	MSVIAHRIIEIKIVTEYHSFNLWHDRKLMDFFDTEADFFSQLSFDGTGISEVPVEVLEGAVSKAVELELDEDTIANLKKDIAWAGEHNEVSVQYDCY*
Ga0182011_100460473	3300014496	Fen	LREDILMSISANRIIKIEVEESYNSFNLWHDRKLMDFLDTEADFFSRLSDDGAGVSEISVEVLEKAVSMAVELELDADTVTNLKKDIAWAKANDQEFVQYDCY*
Ga0182011_100673212	3300014496	Fen	MSVIARRIIEIKTETEYDSFNLWHDGKLMEFLDDEANFFSQLTDDGTGVSEASVEVLEKAVSKAVELELDEDIIINLKKDIAWAKANDEEFVQYYCY*
Ga0182011_100854102	3300014496	Fen	MSVSANRIIEIKVEESYNSFNLWHDRKLMDFLDTEADFFSRLSDDGAGISEVSVEVLEKAVSMAIELELDDDTVTNLKKDIAWAKANDQEFVQYDCY*
Ga0182011_100951073	3300014496	Fen	LREDILMSVSANRIIEIKVEESYNSFNLWHDRKLMDFLDEEANFFSRLSDDGAGVSEVSVEILEKAVSMSVELELDADTVANLKKDIVWAKANDQEFVQYDCY*
Ga0182011_101834213	3300014496	Fen	MSISANRIIEIKVEESYNSFNLWHDRKLMDFLDEEANFFSRLSDDGSGVSEVSIEILEKAVSMSVELELDADTVANLKKDIAWAKTNDQEFVQYDCY*
Ga0182011_102394812	3300014496	Fen	MSVSANRIIEIKVEESYNTFNLWHDRKLMDFLDTEADFFNRLSDDGTGVSEVSVEILEKAVSMAIELELDADTISNLKKDITWAKANDQEFIQYDCY*
Ga0182011_104319552	3300014496	Fen	MSVSANRIIEIKIETEYNSFNLWHDRKLMDFLDTEADFFSQLNADGTGISEVSVEVLENAISKAVELELDADTVTNLKKDIAWAKANDDEFVEYYCY*
Ga0182011_105528351	3300014496	Fen	MSVSANRIIKIEIEETYNSFNLWHDRKLMDFLDKEANFFSRLSDDGAGVSEVSIEILEKAVSMAVELELDADTIAHIKLDIAWAKANDQEFVQYDCY*
Ga0182011_105813283	3300014496	Fen	MSVSANRIIEIKVEESYNTFNLWHDSKLMDFLDTEADFFSRLSDDGTGISEVSVEVLEKAVSMSVELKLDDDTVTNMKKDIEWAKANDQEFVQYDCY*
Ga0182011_106681281	3300014496	Fen	MSVQANRIIEIKTETEYNSFNLWHDRKLMDFLDTEANFFDQLTDDGTGVSEASVEVLENAVSKAVELDLDADTVANLKKDIAWAKAHDEEFVQYYCY*
Ga0182011_107099061	3300014496	Fen	MSVKANRVIEIKIEEEYASFNLWHDRKLMDFLDNEVDFFRGLTSDGTGLAEASVEALENAVAKAVELELDENTVTNLKKDIAWAKENNEEFVQYYCY*
Ga0182011_108216652	3300014496	Fen	SVHANRIIKIEIEESYNSFNLWHDTKLMDFLEDEANFFSRLSDDGNGVSEVSVEVLENAVSKAIELELDADTVANLKKDIAWAKEHNEVNVQYYCY*
Ga0182019_107602402	3300014498	Fen	MSVSANRIIEIKVEESYNSFNLWHDRKLMDFLDAEANFFSRLSDDGSGVSEISVEILEDAVSKSVELELDADIIANLKK
Ga0182021_100210298	3300014502	Fen	VSVSAKRIIKIEIEENYSTFNLWHDRKLMDFLDSEADFFSRLSDDGNGISEVSVEVLEDAVSKASELELDDDTVAHLKLDIAWAKEHNETNVQYYCY*
Ga0182021_103093243	3300014502	Fen	MSVSANRIIEIKVEESYNTFNLWHDSKLMDFLDSEADFFGQLTADGTGVSEASVEVLEKAVSMAVELELDDDTVTNLKKDIAWAKANDQEFVQYDCY*
Ga0182021_103398352	3300014502	Fen	MSVSANRIIEIKTETEYDSFNLWHDRKLMDFLDTEADFFSQLNADGTGISEVSVEVLENAVSKAVELELDTDTVANLKKDIAWAKANDDEFVEYYCY*
Ga0182021_106934713	3300014502	Fen	MSVSANRIIEIKVEESYNSFNLWHDGKLMDFLDTEADFFSRLSDDGTGISEVSVEILEKAVSMAIELELDDDTVTNLKKDIAWAKANDQEFVQYDCY*
Ga0182021_107144903	3300014502	Fen	MSVIAHRIIEIKIETEYHSFNLWHDRKLMDFFDTEADFFSQLSFDGTGISEVPVEVLENAISKAVELELDEDTIADLKRDVVWANEHNEVSVQYDCY*
Ga0182021_107171054	3300014502	Fen	MSVSANRIIEIKVEESYNSFNLWHDRKLMDFLDEEANFFSRLSDDGVGVSEVSVEVLEKAVSMSVELELDADTISNLKKDIAWAKANDQEFVQYDCY*
Ga0182021_107768232	3300014502	Fen	MSVHANRIIKIEIEESYNTFNLWHDRKLMDFLDSEADFFSQLTADGTGVSEASVEVLEDAISKAVELELDDDTVANLKKDIAWAKEHDQEFVQYSCY*
Ga0182021_109730353	3300014502	Fen	MSVIARRIIEIKIETEYNSFNLWHDRKLMDFLDTEGDFFSQLTADGTGISEVSVEVLEDAVSKAIELELDDDTVTNLKKDIAWAKEHNEVNVQYYCY*
Ga0182021_113421273	3300014502	Fen	MSVSANRIIEIKIETGYNSFNLWHDRKLMDFLDTEADFFSQLTADGTGISEVSVEVLEDAVSKAVGLELDADTVANLKKDIAWAKEHKEEFVEYYCY*
Ga0182021_115683173	3300014502	Fen	MSVSANRIIEIKIEQSYNSFNLWHDRKLMDFLDTEADFFSQLTFDGTGVSEASVEVLEKAVSKAVELELDEDTIANLKMDIAWAKANDEEFVQYYCY*
Ga0182021_116075383	3300014502	Fen	MSVSANRIIEIKVEESYNSFNQWHDRKLMDFLDTEADFFSRLSDDGTGISEVSIEVLEKAVSMSVELELDDDTVTNLKKDIAWAKANDQEFVQYDCY*
Ga0182021_118102932	3300014502	Fen	MSVSANRIIEIKVEESYNTFNLWHDRKLMDFLDTEVDFFSRLSDDGTGISEASVEVLEAAVSKAVELELDDDTVTNLKKDIAWAKANDQEFVQYDCY*
Ga0182021_127101142	3300014502	Fen	MSVSANRIIEIKIETEYNSFNLWHDRKLMDFLDTEANFYSGLTNDGTGVAEASVEVLENAVSKAVELELDDDTVANLKKDIAWAKANDEEFVQYYCY*
Ga0182021_131069962	3300014502	Fen	MSVSANRIIEIKVEESYNSFNLWHDRKLMDFLDTEANFFSRLSDDGSGVSEISVEILEKTVSMAVELELDADTISNLKKDIAWAKANDQEFVQYDCY*
Ga0182027_101350684	3300014839	Fen	VEGIQMSVSANRIIEIKVEESYNSFNLWHDRKLMDFLDEEANFFSRLSDDGAGVSEVSVEVLEKAVSMAVDLELDADTVTHIKLDIAWAKEHDDEFVQYDCY*
Ga0182027_103986273	3300014839	Fen	MSVLARRIIEIRTEKKYISFNLWHDKKLMDFLDTEADFCSQLTNDGTGIAEASVEVLENAISKVVELELATDIVANLKKDIAWAKAHNQEFIQYYCY*
Ga0182027_105115282	3300014839	Fen	MSVSANRIIKIEIEETYNSFNLWHDRKLMDFLDKEANFFSRLSDDGAGVSEVSIEILEKAVSMAVELELDADTIAHIKLDIAWAKTNDQEFVQYDCY*
Ga0182027_105176363	3300014839	Fen	MSVIARRIIEIKIETEYNSFNLWHDSKLMDFLDAEANFFSQLTADGTGVSEASVEVLEKAVSMAVELELDDDTVAHLKKDIAWAKENNEEFVQYYCY*
Ga0182027_105788032	3300014839	Fen	MSVHANRIIKIEIEESYNSFNLWHDRKLMDFLDSEADFFSQLTADGTGVSEASVEVLEDAVSKADELELDADTVDNLKKDIAWAKEHNETNVQYYCY*
Ga0182027_106658012	3300014839	Fen	MSVSANRIIEIKVEESYNSFNLWHDRKLMDFLDTEANFFSRLSDDGAGVSEVSVEVLEKAVSMALELELDSDTVSNLKKDIEWGKANDQESVQYDCY*
Ga0182027_107540322	3300014839	Fen	MSVSANRIIEIKVEESYNSFNLWHDRKLMDFLDEEANFFSRLSDDGAGVSEISVEILEKAVSMSVELELDADTVSNLKKDIAWAKANDDEFVQYDCY*
Ga0182027_107716252	3300014839	Fen	MSVIARRIIEIKIETEYNSFNLWHDRKLMDFLDTEANFYSGLTDDGTGVAEASVEVLENAVSKAVELELDDDTVANLKKDI
Ga0182027_110254782	3300014839	Fen	MSVSANRIIEIKVEESYNSFNLWHDRKLMDFLDEEANFFSRLSDDGAGVSEVSVEVLEKAVSMSVELELDADTISNLKKDIAWAKTNDQEFVQYDCY*
Ga0182027_120909951	3300014839	Fen	MSVSANRIIEIKIEETYNSFNLWHDRKLMDFLDTEAGFYSSLSDDGTGVSEVSVEVLEKAVSMAVELELDDDTVANLKKDIAWAKEHDEEFVQYYCY*
Ga0187878_12690012	3300018005	Peatland	MSVNARRIIEIKTEDNYISFNLWHDRKLIEFLDSEGHFFSHLTDKGTGITEASVEVLEKAIDHASELELDTNTITKLKKKIDWEKEHNEEIIQYFCY
Ga0187862_103138762	3300018040	Peatland	MSVLARRIIEIRTEKKYISFNLWHDNKLMDFLDTEADFCSQLTNDGTGIAEASVEVLENAISKVVELELATDIVANLKKDIAWAKAHNQEFIQYYCY
Ga0224542_10021234	3300022516	Soil	MSISAHRIIEIKIEETYNSFNLWHDRKLMDFLDTEAGFYSSLSDDGTGVSEVSVEVLEKAVSMAVELELDDDTVANLKKDIAWAKEHDEEFVQYYCY
Ga0224538_10411081	3300022520	Soil	MSVSANRIIEIKVEESYNTFNLWHDSKLMDFLDTEADFFSRLSDDGTGISEVSVEVLEKAVSMSVELELDDDTVTNLKKDIAWAKEHDEEFV
Ga0224520_10128062	3300023075	Soil	MSVIARRIIEIKIETEYNSFNLWRDTKLRDFLDSEADFFSQLTTDGTGVSEASVEVLEKAVSMAIELELDDDTVANLKKDIAWAKENNEEFVQYYCY
Ga0224520_10340261	3300023075	Soil	MSVSANRIIEIKVEESYNTFNLWHDSKLMDFLDTEADFFSRLSDDGTGISEVSVEVLEKAVSMSVELELDDDTVTNLKKDIAWAKEHDEEFVQYDCY
Ga0224520_10565542	3300023075	Soil	MSVSANRIIEIKIETEYNSFNLWHDRKLMDFLDTEADFFSQLNADGTGISEVSVEVLENAISKAVELELDADTVTNLKKDIAWAKANDDEFVEYYCY
Ga0224520_10582673	3300023075	Soil	HRIIEIKIEETYNSFNLWHDRKLMDFLDTEAGFYSSLSDDGTGVSEVSVEVLEKAVSMAVELELDDDTVANLKKDIAWAKEHDEEFVQYYCY
Ga0224520_11274322	3300023075	Soil	MSVHANRIIKIEIEESYNTFNLWHDRKLMDFLDSEADFFSQLTADGTGVSEASVEVLEDAISKAVELELDDDTVANLKKDIAWAKEHDQEFVQYSCY
Ga0224520_11502422	3300023075	Soil	MSVIAHRIIEIKIETEYHSFNLWHDRKLMDFFDTEADFFSQLSFDGTGITEVPVEVLEGAISKAVELELDEDTIANLKKDIAWAGEHNEVSVQYDCY
Ga0224516_10235071	3300023232	Soil	MSVSANRIIEIKVEESYNSFNLWHDRKLMDFLDEEANFFSRLSDDGAGVSEVSVEILEKAVSMSVELELDADTVANLKKDIVWAKANDQEFVQYDCY
Ga0224516_10412872	3300023232	Soil	MSVIAHRIIEIKIETEYHSFNLWHDRKLMDFFDTEADFFSQLSFDGTGITEVPVEVLEGAISKAVELELDEDTIANLKKDIAWAGEHNEASVQYDCY
Ga0224516_10424222	3300023232	Soil	DKSSVPFPVIILREDILMSISANRIIEIKVEESYNSFNLWHDRKLMDFLDEEANFFSRLSDDGSGVSEVSIEILEKAVSMSVELELDADTVANLKKDIAWAKTNDQEFVQYDCY
Ga0224516_10547591	3300023232	Soil	MSVSANRIIEIKIETEYNSFNLWHDRKLMDFLDTEADFFSQLNADGTGISEVSVEVLENAISKAVELELDADTVTNLKK
Ga0224521_10790181	3300024233	Soil	MSVSANRIIEIKVEESYNTFNLWHDRKLMDFLDTEADFFSRLSDDGTGISEVSVEVLEKAVSMSVELKLDDDTVTNMKKDIEWAKANDQEFVQYDCY
Ga0224521_10813901	3300024233	Soil	GVSVVKIIDTPYPQLIIKEDILMSISAHRIIEIKIEETYNSFNLWHDRKLMDFLDTEAGFYSSLSDDGTGVSEVSVEVLEKAVSMAVELELDDDTVANLKKDIAWAKEHDEEFVQYYCY
Ga0224521_10835163	3300024233	Soil	SYNSFNLWHDRKLMDFLDTEADFFSQLTADGTGISEVSVEVLENAISKAVELELDADTVANIKKDIAWAKEHKEEFVEYYCY
Ga0224523_10531402	3300024238	Soil	MSVSANRIIEIKVEESYNTFNLWHDRKLMDFLDTEADFFSRLSDDGTGISEVSVEVLEKAVSMAIELELDDDTVTNLRKDIAWAKANDQEFVQYDCY
Ga0224522_11571671	3300024240	Soil	MSVSANRIIEIKVEESYNTFNLWHDRKLMDFLDTEADFFNRLSDDGTGVSEVSVEILEKAVSMAIELELDADTISNLKKDITWAKANDQEFIQYDCY
Ga0247845_10229013	3300026451	Soil	MSISANRIIKIEVEESYNSFNLWHDRKLMDFLDTEADFFSRLSDDGAGVSEISVEVLEKAVSMAVELELDADTVTNLKKDIAWAKANDQEFVQYDCY
Ga0247846_10617862	3300026474	Soil	MSVSANRIIEIKIETEYNSFNLWHDRKLMDFLDTEADFFSQLNADGTGISEVSVEVLENAISKAVELELDADTVTNLKKDIAWAKEHKEEFVEYYCY
Ga0265323_100400233	3300028653	Rhizosphere	MSVIAHRIIEIKIETEYHSFNLWHDRKLMDFLDTEADFFSQLTADGTGISEVPVEVLEKAISKAIELELDEDTIANLKKDIAWANEHNEVSVQYDCY
Ga0265323_100697872	3300028653	Rhizosphere	MSVSANRIIEIKVEESYNTFNLWHDRKLMDFLDEEAAFFNQLTADGTGVSEAPVEILEKAVSMSVELELDDDTVTNLKKDIGWAKEHNEEFVQYYCY
Ga0311337_119005701	3300030000	Fen	MSVSANRIIEIKVEESYNTFNLWHDSKLMDFLDTEADFFSRLSDDGTGISEVSVEVLEKAVSMSVELKLDDDTVTNMKKD
Ga0311348_107117442	3300030019	Fen	MSVSANRIIEIKVEESYNTFNLWHDSKLMDFLDTEADFFSRLSDDGTGISEVSVEVLEKAVSMSVELELDDDTVTNLKKDIAWAKEHDEEF
Ga0265316_104921103	3300031344	Rhizosphere	ILMSVSANRVIKIEIEESYNSFNLWHDRKLMDFLDEEGDFFSQLTADGTGVSEAPVEVLERAVSMAVELELDADTVTNLKKDIAWAKEHEEEFVQYYCF
Ga0326728_108892711	3300033402	Peat Soil	MSVLARRIIEIRTEKKYISFNLWHDKKLMDFLDTEADFCSQLTNDGTGIAEASVEVLENAVSKAAELELGTDIVAHLKKDIAWAKAHNQEFIQYYCY
Ga0334821_073801_273_566	3300033798	Soil	MSVIARRIIEIKIETEYNSFNLWHDSKLMDFLDAEANFFSQLTADGTGVSEASVEVLEKAVSMAVELELDDDTVANLKKDIAWAKENNEEFVQYYCY
Ga0334816_042627_211_504	3300033819	Soil	MSVSANRIIEIKIETEYNSFNLWHDRKLMDFLDTEADFFSQLNADGTGISEVSVEVLENAISKAVELELDADTVANIKKDIAWAKEHKEEFVEYYCY
Ga0334816_091641_116_409	3300033819	Soil	MSVSANRIIEIKVEESYNSFNLWHDRKLMDFLDEEANFFSRLSDDGAGVSEVSVEVLEKAVSMSVELELDADTISNLKKDIAWAKANDQEFVQYDCY
Ga0334817_031424_557_850	3300033820	Soil	MSVSANRIIEIKIETEYNSFNLWHDRKLMDFLDTEANFYSGLTNDGTGVAEASVEVLENAVSKAVELELDTDTVANLKKDIAWAKEHKEEFVEYYCY
Ga0334810_004220_2645_2956	3300033890	Soil	LREDILMSISANRIIEIKVEESYNSFNLWHDRKLMDFLDEEANFFSRLSDDGSGVSEVSIEILEKAVSMSVELELDADTVANLKKDIAWAKTNDQEFVQYDCY
Ga0334822_027258_915_1208	3300034070	Soil	MSVSANRIIEIKIETEYNSFNLWHDRKLMDFLDTEANFYSGLTNDGTGVAEASVEVLENAVSKAVELELDDDTVANLKKDIAWAKANDEEFVQYYCY
Ga0334822_079934_254_604	3300034070	Soil	VVKIIDTPYPQLIIKEDILMSISAHRIIEIKIEETYNSFNLWHDRKLMDFLDTEAGFYSSLSDDGTGVSEVSVEVLEKAVSMAVELELDDDTVANLKKDIAWAKEHDEEFVQYYCY
Ga0326724_0012648_1016_1309	3300034091	Peat Soil	MSVIARRIIEIKIETEYNSFNLWHDRKLMDFLDEEADFFSQLTADGTGVSEASVEVLEKAVSMVAELELDADTVANLKKDIAWAKAKDQEFVQYYCY
Ga0370501_0247348_242_535	3300034195	Untreated Peat Soil	MSVSANRIIEIKVEESYNSFNLWHDSKLMDFLDTEADFFSRLSDDGTGISEVSVEVLEKAVSMSVELELDDDTVTNLKKDIAWAKEHDEEFVQYDCY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098392

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences