NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F098422

Metagenome Family F098422

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F098422
Family Type Metagenome
Number of Sequences 103
Average Sequence Length 76 residues
Representative Sequence RATETVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Number of Associated Samples 61
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 27.18 %
% of genes near scaffold ends (potentially truncated) 53.40 %
% of genes from short scaffolds (< 2000 bps) 90.29 %
Associated GOLD sequencing projects 55
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (63.107 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(39.806 % of family members)
Environment Ontology (ENVO) Unclassified
(68.932 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(70.874 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 58.33%    β-sheet: 0.00%    Coil/Unstructured: 41.67%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF07238PilZ 4.85
PF01740STAS 4.85
PF13701DDE_Tnp_1_4 1.94
PF01872RibD_C 1.94
PF13826DUF4188 0.97
PF15780ASH 0.97
PF03795YCII 0.97
PF00034Cytochrom_C 0.97
PF00282Pyridoxal_deC 0.97
PF13683rve_3 0.97
PF04542Sigma70_r2 0.97
PF00069Pkinase 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 3.88
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 1.94
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 1.94
COG0076Glutamate or tyrosine decarboxylase or a related PLP-dependent proteinAmino acid transport and metabolism [E] 0.97
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.97
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 0.97
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.97
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 0.97
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 0.97


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A63.11 %
All OrganismsrootAll Organisms36.89 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004633|Ga0066395_10079549All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1531Open in IMG/M
3300005332|Ga0066388_100075854All Organisms → cellular organisms → Bacteria3700Open in IMG/M
3300005332|Ga0066388_100142601All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2962Open in IMG/M
3300005764|Ga0066903_101214286Not Available1401Open in IMG/M
3300005764|Ga0066903_101298478Not Available1359Open in IMG/M
3300005764|Ga0066903_102344720Not Available1031Open in IMG/M
3300005764|Ga0066903_107973535Not Available543Open in IMG/M
3300009792|Ga0126374_11624508Not Available535Open in IMG/M
3300010048|Ga0126373_10197018Not Available1950Open in IMG/M
3300010048|Ga0126373_10240220All Organisms → cellular organisms → Bacteria → Acidobacteria1777Open in IMG/M
3300010048|Ga0126373_10272752All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1675Open in IMG/M
3300010358|Ga0126370_10494165All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1032Open in IMG/M
3300010361|Ga0126378_11792890Not Available698Open in IMG/M
3300010376|Ga0126381_100735327All Organisms → cellular organisms → Bacteria1413Open in IMG/M
3300010376|Ga0126381_102382908Not Available759Open in IMG/M
3300012971|Ga0126369_10187587All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1982Open in IMG/M
3300012971|Ga0126369_11354054Not Available802Open in IMG/M
3300016270|Ga0182036_10073779Not Available2234Open in IMG/M
3300016270|Ga0182036_10228079Not Available1382Open in IMG/M
3300016294|Ga0182041_10075077Not Available2394Open in IMG/M
3300016294|Ga0182041_10204500Not Available1575Open in IMG/M
3300016294|Ga0182041_10504454All Organisms → cellular organisms → Bacteria → Acidobacteria1049Open in IMG/M
3300016319|Ga0182033_10609629Not Available949Open in IMG/M
3300016319|Ga0182033_11751336Not Available563Open in IMG/M
3300016357|Ga0182032_10644879Not Available885Open in IMG/M
3300016371|Ga0182034_10573475Not Available949Open in IMG/M
3300016404|Ga0182037_10243186All Organisms → cellular organisms → Bacteria → Acidobacteria1420Open in IMG/M
3300016404|Ga0182037_10538932Not Available983Open in IMG/M
3300016404|Ga0182037_11216354Not Available662Open in IMG/M
3300016422|Ga0182039_10181569Not Available1662Open in IMG/M
3300016422|Ga0182039_10743234All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium867Open in IMG/M
3300016422|Ga0182039_10746910All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter865Open in IMG/M
3300016422|Ga0182039_11940987Not Available541Open in IMG/M
3300016422|Ga0182039_12025355Not Available530Open in IMG/M
3300016422|Ga0182039_12186688Not Available510Open in IMG/M
3300021560|Ga0126371_10048058All Organisms → cellular organisms → Bacteria4074Open in IMG/M
3300021560|Ga0126371_10384905All Organisms → cellular organisms → Bacteria → Acidobacteria1542Open in IMG/M
3300021560|Ga0126371_10595822Not Available1254Open in IMG/M
3300021560|Ga0126371_12350072All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium644Open in IMG/M
3300021560|Ga0126371_12917305Not Available579Open in IMG/M
3300026809|Ga0207820_106812Not Available927Open in IMG/M
3300026859|Ga0207859_1017572Not Available621Open in IMG/M
3300026865|Ga0207746_1014839Not Available661Open in IMG/M
3300026909|Ga0207858_1004211Not Available1490Open in IMG/M
3300026928|Ga0207779_1004366All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2080Open in IMG/M
3300026945|Ga0207743_1008680All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1123Open in IMG/M
3300027000|Ga0207803_1031062Not Available639Open in IMG/M
3300027003|Ga0207722_1029257Not Available600Open in IMG/M
3300027035|Ga0207776_1039114Not Available584Open in IMG/M
3300027516|Ga0207761_1024437Not Available1204Open in IMG/M
3300031543|Ga0318516_10795981All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium534Open in IMG/M
3300031544|Ga0318534_10842700Not Available514Open in IMG/M
3300031545|Ga0318541_10858974Not Available506Open in IMG/M
3300031546|Ga0318538_10129352All Organisms → cellular organisms → Bacteria1324Open in IMG/M
3300031546|Ga0318538_10820492Not Available505Open in IMG/M
3300031561|Ga0318528_10323790All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300031573|Ga0310915_10607162Not Available775Open in IMG/M
3300031679|Ga0318561_10760751All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium532Open in IMG/M
3300031680|Ga0318574_10127422Not Available1433Open in IMG/M
3300031682|Ga0318560_10347928Not Available800Open in IMG/M
3300031719|Ga0306917_10859905Not Available710Open in IMG/M
3300031736|Ga0318501_10715552Not Available552Open in IMG/M
3300031744|Ga0306918_10141496All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1767Open in IMG/M
3300031744|Ga0306918_10943224Not Available671Open in IMG/M
3300031782|Ga0318552_10665955Not Available531Open in IMG/M
3300031792|Ga0318529_10105405All Organisms → cellular organisms → Bacteria1275Open in IMG/M
3300031793|Ga0318548_10242373All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium886Open in IMG/M
3300031795|Ga0318557_10023232All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2442Open in IMG/M
3300031805|Ga0318497_10149856Not Available1276Open in IMG/M
3300031819|Ga0318568_10512460All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300031833|Ga0310917_10239257Not Available1220Open in IMG/M
3300031879|Ga0306919_10598670All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium850Open in IMG/M
3300031879|Ga0306919_10950989Not Available658Open in IMG/M
3300031879|Ga0306919_11117289Not Available600Open in IMG/M
3300031879|Ga0306919_11393515Not Available529Open in IMG/M
3300031890|Ga0306925_10364763All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1550Open in IMG/M
3300031890|Ga0306925_10694475All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1066Open in IMG/M
3300031890|Ga0306925_10823401All Organisms → cellular organisms → Bacteria → Acidobacteria961Open in IMG/M
3300031890|Ga0306925_11349541Not Available706Open in IMG/M
3300031910|Ga0306923_10311808All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter1797Open in IMG/M
3300031910|Ga0306923_10391118Not Available1583Open in IMG/M
3300031910|Ga0306923_10696468All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1131Open in IMG/M
3300031910|Ga0306923_11233168Not Available797Open in IMG/M
3300031912|Ga0306921_10401736Not Available1599Open in IMG/M
3300031941|Ga0310912_10097119All Organisms → cellular organisms → Bacteria → Acidobacteria2164Open in IMG/M
3300031941|Ga0310912_10426263Not Available1033Open in IMG/M
3300031941|Ga0310912_10873425All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300031942|Ga0310916_10008783All Organisms → cellular organisms → Bacteria6641Open in IMG/M
3300031942|Ga0310916_10507329Not Available1027Open in IMG/M
3300031946|Ga0310910_10857659Not Available713Open in IMG/M
3300031947|Ga0310909_10646447Not Available881Open in IMG/M
3300031947|Ga0310909_11244949Not Available600Open in IMG/M
3300031954|Ga0306926_10808348All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1129Open in IMG/M
3300031954|Ga0306926_11299325Not Available849Open in IMG/M
3300031954|Ga0306926_11749663Not Available707Open in IMG/M
3300032001|Ga0306922_10080475Not Available3419Open in IMG/M
3300032001|Ga0306922_11030624Not Available847Open in IMG/M
3300032001|Ga0306922_11048935All Organisms → cellular organisms → Bacteria → Acidobacteria838Open in IMG/M
3300032010|Ga0318569_10395985All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium644Open in IMG/M
3300032039|Ga0318559_10107773Not Available1239Open in IMG/M
3300032051|Ga0318532_10242420Not Available640Open in IMG/M
3300032090|Ga0318518_10486524Not Available632Open in IMG/M
3300032261|Ga0306920_103328909Not Available598Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil39.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil29.13%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil16.50%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil14.56%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300026809Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 47 (SPAdes)EnvironmentalOpen in IMG/M
3300026859Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 25 (SPAdes)EnvironmentalOpen in IMG/M
3300026865Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 75 (SPAdes)EnvironmentalOpen in IMG/M
3300026909Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 23 (SPAdes)EnvironmentalOpen in IMG/M
3300026928Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 44 (SPAdes)EnvironmentalOpen in IMG/M
3300026945Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 55 (SPAdes)EnvironmentalOpen in IMG/M
3300027000Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41 (SPAdes)EnvironmentalOpen in IMG/M
3300027003Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 26 (SPAdes)EnvironmentalOpen in IMG/M
3300027035Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 30 (SPAdes)EnvironmentalOpen in IMG/M
3300027516Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031792Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23EnvironmentalOpen in IMG/M
3300031793Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21EnvironmentalOpen in IMG/M
3300031795Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032039Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21EnvironmentalOpen in IMG/M
3300032051Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26EnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0066395_1007954933300004633Tropical Forest SoilVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR*
Ga0066388_10007585413300005332Tropical Forest SoilMREVGAGRATETVVNVQPILNRRLDALSEWFLKQGFALTWRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMFREEDR*
Ga0066388_10014260143300005332Tropical Forest SoilMRDVSARRATETVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR*
Ga0066903_10121428633300005764Tropical Forest SoilVKVQPISHRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPVADMTGDEKEHADEAMRMFREEDR*
Ga0066903_10129847823300005764Tropical Forest SoilMRHVGAGRATETVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR*
Ga0066903_10234472023300005764Tropical Forest SoilVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPRADMTGDEKEHADEV
Ga0066903_10797353513300005764Tropical Forest SoilVKVQPISNRLLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRM
Ga0126374_1162450813300009792Tropical Forest SoilDVLSERLLKHGFALTQRNWCELKKTVNSDEPPADMTGDEKEHADEVMRIFREEDR*
Ga0126373_1019701823300010048Tropical Forest SoilVKVQPISNRRLDALSEWFLRHGLALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRLFREEDR*
Ga0126373_1024022023300010048Tropical Forest SoilMVVKAQPISNRRLDVLSEWYLKQGFALTWHNWCELKKKVNPDEPLADMTGDEKEYADEAMRMFREEDR*
Ga0126373_1027275213300010048Tropical Forest SoilVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDETLADMTGDEKEHADKVMRMFREEDR*
Ga0126370_1049416513300010358Tropical Forest SoilMRNLEPARAKAILATMRDVSARRATETVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR*
Ga0126378_1179289023300010361Tropical Forest SoilRSLEPARATAILATMRHVGAGRAAETVVKMQPISNRRLDVLSERLLKHGFALTQRNWCELKKKVNSDEPPADMTGDEKEHADEVMRIFREEDR*
Ga0126381_10073532723300010376Tropical Forest SoilVKVQPISNRRLDALSEWFLRHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRLFREEDR*
Ga0126381_10238290813300010376Tropical Forest SoilQPISNRRLDALSEWFLKHGFALTQRNWCDLKKKVNSDEPLADMTGDEKEDADEAMRMFREEDS*
Ga0126369_1018758723300012971Tropical Forest SoilMRDVSARRATETVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDETLADMTGDEKEHADKVMRMFREEDR*
Ga0126369_1135405423300012971Tropical Forest SoilVKVQPISHRRLDALSEWFLKHGFALTQRNWCELKKKVNPDEPLADMTGGEKEYADEAMRMFREEDR*
Ga0182036_1007377933300016270SoilMRSLEPARATAILATMSEVGTGRATDTVAKVRPISNRRLDALSEWFLKQGFALTWRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMFREEDR
Ga0182036_1022807943300016270SoilSLEPARATAILATMREVGAGRATETVVKVQPISNGRLDALGEWFLKQCFALTSRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMLREEDR
Ga0182041_1007507743300016294SoilMTNDAGLHEILHVALDNAIVRSLEPARATAILATMSEVGAVRATETVVKVQPISNRRLNALSEWFLEHGFALTRRNWCEFKKKVNSDEPLADMTGDEREHADEVMRIFREEDR
Ga0182041_1020450033300016294SoilMSEVGTGRATDTVAKVRPISNRRLDALSEWFLKQGFALTWRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMFRE
Ga0182041_1050445423300016294SoilDALGEWFLKQCFALTSRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMFREEDR
Ga0182033_1060962913300016319SoilVKVQPISSRRLDVLSERLLKHGFALTQRNWCELKKKVNSDEPPADMTGDEKEHADEVMRIFREEDR
Ga0182033_1175133613300016319SoilMGEAGAGRATKTVVKVQPISNRRLDAVSEWFLKQAFALTWRNWCELKKKVNSDETLADMTGDEKEYADEAMRMFREEDR
Ga0182032_1064487913300016357SoilMSEVGTGRATDTVAKVRPISNRRLDALSEWFLKQGFALTWRNWCELKKKVNSDEPLADMTGDEKEHADE
Ga0182034_1057347513300016371SoilMSEVGTGRATDTVAKVRPISNRRLDALSEWFLKQGFALTWRNWCELKKKVNSDETLADMTGDEKEHADKVMRMFREEDR
Ga0182037_1024318613300016404SoilILATMRDVGAGRATEMVVKVQPISNRRPDALSEWYLKQGFALTWRNWCELKKKINPDEPLAYMTGDEKEYADEAMRMFREEDR
Ga0182037_1053893213300016404SoilMREVGAGRATETVVKVQPISNRRLDALSEWFLKHGFALTRRNWCELKKKVHSDEPLADMTRDEKEHADDAMRMFREEDR
Ga0182037_1121635413300016404SoilMVVKVQPISNRRLDALSEWFLKHGFALTRRNWCELKKKVNSDEPLADMTGDEKEHADEVMRIFREEDR
Ga0182039_1018156933300016422SoilVKVQPISNRRLDALSEWFLKHGFALTRRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0182039_1074323413300016422SoilPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0182039_1074691013300016422SoilMVVKVQPISNRRLDALSEWFLKHGFALTRRNWCELKKKVNSDEPLADMTGDEKEHAD
Ga0182039_1194098723300016422SoilVKVQPISNGRLDALGEWFLKQCFALTSRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMFR
Ga0182039_1202535513300016422SoilAILATMSEVGAGRATETVVKVQPISNRRPDALSEWYLKQGFALTWRNWCELKKKINPDEPLAYMTGDEKEYADEAMRMFREEDR
Ga0182039_1218668823300016422SoilDALSEWFLKQGFALTWRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMFREEDR
Ga0126371_1004805813300021560Tropical Forest SoilQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0126371_1038490533300021560Tropical Forest SoilMVVKAQPISNRRLDVLSEWCLKQGFALTWHNWCELKKKVNPDEPLADMTGDEKEYADEAMRMFREEDR
Ga0126371_1059582213300021560Tropical Forest SoilVKVQPISHRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPVADMTGDEKEHADEAMRMFREEDR
Ga0126371_1235007213300021560Tropical Forest SoilVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDETLADMTGDEKEHADKVMRMFREEDR
Ga0126371_1291730523300021560Tropical Forest SoilVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0207820_10681223300026809Tropical Forest SoilMRDVGARRATETVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMFREEDR
Ga0207859_101757213300026859Tropical Forest SoilPISNRPLDAPSEWFLKQGFALTWRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMFREEDR
Ga0207746_101483923300026865Tropical Forest SoilVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMFREEDR
Ga0207858_100421143300026909Tropical Forest SoilDVVKVQPISNRPLDAPSEWFLKQGFALTWRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMFREEDR
Ga0207779_100436633300026928Tropical Forest SoilMRNLEPARLATMRDVGARRATETVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLTDMTGDEKEHADEVMRMFREEDR
Ga0207743_100868033300026945Tropical Forest SoilWLRCDVGARRATETVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0207803_103106213300027000Tropical Forest SoilYGDVVKVQPISNRPLDAPSEWFLKQGFALTWRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMFREEDR
Ga0207722_102925713300027003Tropical Forest SoilMRDVGARRATETVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0207776_103911423300027035Tropical Forest SoilVKVQPISNRPLDAPSEWFLKQGFALTWRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0207761_102443713300027516Tropical Forest SoilMRNLEPARLATMRDVGARRATETVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0318516_1079598113300031543SoilVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDETLADMTGDEKEHADKVMRMFREEDR
Ga0318534_1084270023300031544SoilMREVGAGRATETVVKVQPISNRRLDALSEWFLKRGFALTRRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMFREEDR
Ga0318541_1085897413300031545SoilILATMSEVGAVRATETVVKVQPISNRRLNALSEWFLEHGFALTRRNWCELKKKVNSDETLGDMTGDEKEHADEAMRIFREEDR
Ga0318538_1012935233300031546SoilMRNLEPARAKAILATMRHVGAGRATETVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0318538_1082049213300031546SoilMTNDAGLHEILHVALDNAIVRSLEPARATAILATMSEVGAVRATETVVKVQPISNRRLNALSEWFLEHGFALTRRNWCELKKKVNSDETLGDMTGDEKEHADEAMRIFREEDR
Ga0318528_1032379013300031561SoilMRHVGAGRATETVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0310915_1060716213300031573SoilMREVGAGRATETVVKVQPISNRRLDALSEWFLKHGFALTRRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMFREEDR
Ga0318561_1076075113300031679SoilVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0318574_1012742223300031680SoilVKVQPISNRRLNALSEWFLEHGFALTRRNWCELKKKVNSDETLGDMTGDEKEHADEAMRIFREEDR
Ga0318560_1034792813300031682SoilVKVQPISNGRLDALGEWFLKQCFALTWRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMFREEDR
Ga0306917_1085990513300031719SoilMRSLEPARATAILATMSEVGAGRATETVVKVQPISNRRPDALSEWYLKQGFALTWRNWCELKKKINPDEPLAYMTGDEKEYADEAMRMFREEDR
Ga0318501_1071555213300031736SoilMRSLEPARATAILATVRHVGAGRATETVVKVQPISSRRLDVLSERLLKHGFALTQRNWCELKKKVNSDEPPADMTGDEKEHADEVMRIFREEDR
Ga0306918_1014149633300031744SoilRDVSARRATETVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0306918_1094322413300031744SoilMRDVGAGRATEMVVKVQPISNRRLDALSEWFLKHGFALTRRNWCELKKKVNSDEPLADMTGDEKEHADEAMR
Ga0318552_1066595513300031782SoilLATMREVGAGRATETVVKVQPISNGRLDALGEWFLKQCFALTSRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0318529_1010540523300031792SoilMRGLEPARATAILATMREVGAGRATETVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0318548_1024237323300031793SoilAHFSMSTCRVRQRHRMRNLEPARAKAILATMRHVGAGRATETVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0318557_1002323233300031795SoilVKVQPISNRRLDALGEWFLKQCFALTSRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMFREEDR
Ga0318497_1014985613300031805SoilMSTCRVRQRHRMRNLEPARAKAILATMRHVGAGRATETVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0318568_1051246013300031819SoilMRHVGAGRATETVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMFREEDR
Ga0310917_1023925723300031833SoilVKVQPISNGRLDALGEWFLKQCFALTSRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMFREEDR
Ga0306919_1059867013300031879SoilARAKAILATMRDVSARRATETVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0306919_1095098913300031879SoilHRMRSLEPARATAILATMGEAGAGRATKTVVKVQPISNRRLDAVSEWFLKQAFALTWRNWCELKKKVNSDETLADMTGDEKEYADEAMRMFREEDR
Ga0306919_1111728913300031879SoilMSEVGTGRATDTVAKVRPISNRRLDALSEWFLKQGFALTWRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMFREEDR
Ga0306919_1139351513300031879SoilQRHRMRSLEPARATAILATMSEVGAGRATETVVKVQPISNRRPDALSEWYLKQGFALTWRNWCELKKKINPDEPLAYMTGDEKEYADEAMRMFREEDR
Ga0306925_1036476323300031890SoilMRDVSARRATETVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0306925_1069447513300031890SoilDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0306925_1082340123300031890SoilVKVQPISNRRLDALSEWFLKHGFALTRRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMFREEDR
Ga0306925_1134954123300031890SoilETVVKVQPISNRRPDALSEWYLKQGFALTWRNWCELKKKINPDEPLAYMTGDEKEYADEAMRMFREEDR
Ga0306923_1031180843300031910SoilMRDVGAGRATEMVVKVQPISNRRLDALSEWFLKHGFALTRRNWCELKKKVNSDEPLADMTGDEKEHADEVMRIFREEDR
Ga0306923_1039111813300031910SoilMRSLEPARATAILATMGEAGAGRATKTVVKVQPISNRRLDAVSEWFLKQAFALTWRNWCELKKKVNSDETLADMTGDEKEYADEAMRMFREEDR
Ga0306923_1069646813300031910SoilVKVQPISNGRLDALGEWFLKQCFALTSRNWCELKKKVNSDEPLADMTGDEKEHA
Ga0306923_1123316823300031910SoilRATETVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0306921_1040173633300031912SoilVKVQPISNRRPDALSEWYLKQGFALTWRNWCELKKKINPDEPLAYMTGDEKEYADEAMRMFREEDR
Ga0310912_1009711933300031941SoilMRSLEPARATAILATMREVGAGRATETVVKVQPISNGRLDALGEWFLKQCFALTSRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMFREEDR
Ga0310912_1042626333300031941SoilVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEV
Ga0310912_1087342513300031941SoilMRDVGAGRATEMVVKVQPISNRRLDALSEWFLKHGFALTRRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMF
Ga0310916_1000878313300031942SoilMSEVGTGRATDTVAKVRPISNRRLDALSEWFLKQGFALTWRNWCELKKKVNSDEPLADMTGDEKEHADEAMRM
Ga0310916_1050732913300031942SoilVKVQPISNGRLDALGEWFLKQCFALTSRNWCELKKKVNSDEPLADMTGDEKEHADEAM
Ga0310910_1085765923300031946SoilMRGLEPARATAILATMREVGAGRATETVVKVQPISNRRLDALSEWFLKHGFALTRRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMFREEDR
Ga0310909_1064644723300031947SoilMRSLEPARATAILATMREVGAGRATETVVKVQPISNRRLDALSEWFLKHGFALTRRNWCELKKKVNSDEPLADMTGDEKEHADEAMR
Ga0310909_1124494913300031947SoilDVLSERLLKHGFALTQRNWCELKKKVNSDEPPADMTGDEKEHADEVMRIFREEDR
Ga0306926_1080834833300031954SoilVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0306926_1129932513300031954SoilRQRHRMRSLEPARATAILATMSEVGAGRATETVVKVQPISNRRPDALSEWYLKQGFALTWRNWCELKKKINPDEPLAYMTGDEKEYADEAMRMFREEDR
Ga0306926_1174966313300031954SoilTCRVRQRHRMRNLEPARAKAILATMRHVGAGRATETVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0306922_1008047533300032001SoilMSEVGAGRATETVVKVQPISNRRPDALSEWYLKQGFALTWRNWCELKKKINPDEPLAYMTGDEKEYADEAMRMFREEDR
Ga0306922_1103062423300032001SoilVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDETLADMTGDEKEHADKVMRMFREE
Ga0306922_1104893513300032001SoilLEPARATAILATMREVGAGRATETVVKVQPISNRRLDALSEWFLKHGFALTRRNWCELKKKVNSDEPLADMTGDEKEHADEAMRMFREEDR
Ga0318569_1039598523300032010SoilVSARRATETVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0318559_1010777313300032039SoilAILATMRHVGAGRATETVVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDEPLADMTGDEKEHADEVMRMFREEDR
Ga0318532_1024242013300032051SoilVKVQPISNRRLDALSEWFLKHGFALTQRNWCELKKKVNSDETLADMTGDEKEHADKVMRMFR
Ga0318518_1048652423300032090SoilMSEVGAVRATETVVKVQPISNRRLNALSEWFLEHGFALTRRNWCELKKKVNSDETLGDMTGDEKEHADEAMRIFREEDR
Ga0306920_10332890913300032261SoilARATAIRATVRHVGAGRATETVVKVQPISSRRLDVLSERLLKHGFALTQRNWCELKKKVNSDEPPADMTGDEKEHADEVMRIFREEDR


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