NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F098785

Metagenome / Metatranscriptome Family F098785

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F098785
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 57 residues
Representative Sequence LVVVHPAGNSDFADACSRYRALLVDQSTFASATVEELLDGAILPAQTTAALRDRYLPG
Number of Associated Samples 93
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.02 %
% of genes near scaffold ends (potentially truncated) 94.17 %
% of genes from short scaffolds (< 2000 bps) 91.26 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (80.583 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(26.214 % of family members)
Environment Ontology (ENVO) Unclassified
(36.893 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.631 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 41.86%    β-sheet: 0.00%    Coil/Unstructured: 58.14%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF07883Cupin_2 9.71
PF09413DUF2007 3.88
PF00857Isochorismatase 3.88
PF01738DLH 2.91
PF02952Fucose_iso_C 1.94
PF13091PLDc_2 1.94
PF01636APH 1.94
PF13559DUF4129 1.94
PF04909Amidohydro_2 1.94
PF00296Bac_luciferase 1.94
PF12847Methyltransf_18 0.97
PF00196GerE 0.97
PF00583Acetyltransf_1 0.97
PF08281Sigma70_r4_2 0.97
PF12680SnoaL_2 0.97
PF07228SpoIIE 0.97
PF13578Methyltransf_24 0.97
PF00728Glyco_hydro_20 0.97
PF00903Glyoxalase 0.97
PF02771Acyl-CoA_dh_N 0.97
PF13302Acetyltransf_3 0.97
PF03737RraA-like 0.97
PF03640Lipoprotein_15 0.97
PF00005ABC_tran 0.97
PF00528BPD_transp_1 0.97
PF02782FGGY_C 0.97
PF13551HTH_29 0.97
PF00313CSD 0.97
PF07876Dabb 0.97
PF16875Glyco_hydro_36N 0.97
PF04828GFA 0.97
PF00330Aconitase 0.97
PF13649Methyltransf_25 0.97
PF01709Transcrip_reg 0.97
PF08241Methyltransf_11 0.97
PF00202Aminotran_3 0.97
PF02838Glyco_hydro_20b 0.97
PF00723Glyco_hydro_15 0.97
PF06772LtrA 0.97
PF07366SnoaL 0.97
PF09587PGA_cap 0.97
PF16874Glyco_hydro_36C 0.97
PF13419HAD_2 0.97
PF14378PAP2_3 0.97
PF00561Abhydrolase_1 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG1335Nicotinamidase-related amidaseCoenzyme transport and metabolism [H] 3.88
COG1535Isochorismate hydrolaseSecondary metabolites biosynthesis, transport and catabolism [Q] 3.88
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 1.94
COG2407L-fucose isomerase or related proteinCarbohydrate transport and metabolism [G] 1.94
COG3525N-acetyl-beta-hexosaminidaseCarbohydrate transport and metabolism [G] 1.94
COG0217Transcriptional and/or translational regulatory protein YebC/TACO1Translation, ribosomal structure and biogenesis [J] 0.97
COG0684RNA degradosome component RraA (regulator of RNase E activity)Translation, ribosomal structure and biogenesis [J] 0.97
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.97
COG3387Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 familyCarbohydrate transport and metabolism [G] 0.97
COG3791Uncharacterized conserved proteinFunction unknown [S] 0.97
COG4292Low temperature requirement protein LtrA (function unknown)Function unknown [S] 0.97
COG4315Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)Function unknown [S] 0.97

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms80.58 %
UnclassifiedrootN/A19.42 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000880|AL20A1W_1384710Not Available758Open in IMG/M
3300000956|JGI10216J12902_102811530All Organisms → cellular organisms → Bacteria → Terrabacteria group1074Open in IMG/M
3300000956|JGI10216J12902_117148667All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300003203|JGI25406J46586_10152464Not Available674Open in IMG/M
3300003373|JGI25407J50210_10051192Not Available1046Open in IMG/M
3300004156|Ga0062589_102379185Not Available546Open in IMG/M
3300004156|Ga0062589_102917286Not Available500Open in IMG/M
3300004157|Ga0062590_101691919All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium644Open in IMG/M
3300004479|Ga0062595_101305018All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales653Open in IMG/M
3300005168|Ga0066809_10041761All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1004Open in IMG/M
3300005171|Ga0066677_10647740All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium595Open in IMG/M
3300005177|Ga0066690_10646839All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium704Open in IMG/M
3300005181|Ga0066678_11069254All Organisms → cellular organisms → Bacteria → Terrabacteria group520Open in IMG/M
3300005330|Ga0070690_100800288Not Available731Open in IMG/M
3300005440|Ga0070705_101012759All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia675Open in IMG/M
3300005456|Ga0070678_102153223All Organisms → cellular organisms → Bacteria → Terrabacteria group529Open in IMG/M
3300005548|Ga0070665_100968553All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria863Open in IMG/M
3300005618|Ga0068864_102367944All Organisms → cellular organisms → Bacteria → Terrabacteria group537Open in IMG/M
3300005718|Ga0068866_10998433Not Available594Open in IMG/M
3300005843|Ga0068860_101371916All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium728Open in IMG/M
3300006028|Ga0070717_11786165All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium556Open in IMG/M
3300006894|Ga0079215_11149111All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium586Open in IMG/M
3300006903|Ga0075426_11278080Not Available557Open in IMG/M
3300006903|Ga0075426_11316853All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium548Open in IMG/M
3300009098|Ga0105245_12609858Not Available558Open in IMG/M
3300009100|Ga0075418_11615450All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium704Open in IMG/M
3300009840|Ga0126313_10688924All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300010045|Ga0126311_10093342All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2049Open in IMG/M
3300010154|Ga0127503_10380855All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300010321|Ga0134067_10376853All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300010323|Ga0134086_10482878All Organisms → cellular organisms → Bacteria → Terrabacteria group510Open in IMG/M
3300012019|Ga0120139_1145674All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia615Open in IMG/M
3300012189|Ga0137388_10656631All Organisms → cellular organisms → Bacteria → Terrabacteria group974Open in IMG/M
3300012200|Ga0137382_10855272All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300012210|Ga0137378_10732613All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300012285|Ga0137370_10445095All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium788Open in IMG/M
3300012353|Ga0137367_10223689All Organisms → cellular organisms → Bacteria1359Open in IMG/M
3300012355|Ga0137369_10143185All Organisms → cellular organisms → Bacteria1906Open in IMG/M
3300012355|Ga0137369_10776264All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium655Open in IMG/M
3300012355|Ga0137369_10997621All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium555Open in IMG/M
3300012356|Ga0137371_10929423All Organisms → cellular organisms → Bacteria → Terrabacteria group661Open in IMG/M
3300012357|Ga0137384_10490328All Organisms → cellular organisms → Bacteria1009Open in IMG/M
3300012358|Ga0137368_10352034All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia979Open in IMG/M
3300012359|Ga0137385_10846144All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300012532|Ga0137373_10035705All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4772Open in IMG/M
3300012915|Ga0157302_10191974Not Available726Open in IMG/M
3300012930|Ga0137407_12221381All Organisms → cellular organisms → Bacteria → Terrabacteria group524Open in IMG/M
3300012944|Ga0137410_10734073All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium825Open in IMG/M
3300012951|Ga0164300_10127798All Organisms → cellular organisms → Bacteria1159Open in IMG/M
3300012972|Ga0134077_10473409All Organisms → cellular organisms → Bacteria → Proteobacteria551Open in IMG/M
3300012986|Ga0164304_11791506All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi514Open in IMG/M
3300013308|Ga0157375_10590402All Organisms → cellular organisms → Bacteria1270Open in IMG/M
3300013765|Ga0120172_1033541All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1402Open in IMG/M
3300013768|Ga0120155_1190178Not Available546Open in IMG/M
3300014325|Ga0163163_10610634All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter1154Open in IMG/M
3300014881|Ga0180094_1155347All Organisms → cellular organisms → Bacteria → Terrabacteria group536Open in IMG/M
3300014969|Ga0157376_11356757All Organisms → cellular organisms → Bacteria → Terrabacteria group742Open in IMG/M
3300015077|Ga0173483_10709791All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300015245|Ga0137409_10306816All Organisms → cellular organisms → Bacteria1394Open in IMG/M
3300018027|Ga0184605_10375188All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300018061|Ga0184619_10070323All Organisms → cellular organisms → Bacteria1545Open in IMG/M
3300018061|Ga0184619_10194059All Organisms → cellular organisms → Bacteria933Open in IMG/M
3300018071|Ga0184618_10116760All Organisms → cellular organisms → Bacteria1063Open in IMG/M
3300018429|Ga0190272_10428416All Organisms → cellular organisms → Bacteria → Terrabacteria group1092Open in IMG/M
3300019884|Ga0193741_1159706All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300019885|Ga0193747_1091484All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium743Open in IMG/M
3300020002|Ga0193730_1134130All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium669Open in IMG/M
3300021080|Ga0210382_10065973All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1456Open in IMG/M
3300022756|Ga0222622_11386561All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia517Open in IMG/M
3300022880|Ga0247792_1118007Not Available556Open in IMG/M
3300026319|Ga0209647_1015560All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium4899Open in IMG/M
3300026527|Ga0209059_1309666All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium535Open in IMG/M
3300026547|Ga0209156_10368287All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300028711|Ga0307293_10044085All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1376Open in IMG/M
3300028715|Ga0307313_10159955All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300028717|Ga0307298_10076186All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium938Open in IMG/M
3300028718|Ga0307307_10183389All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium660Open in IMG/M
3300028719|Ga0307301_10043493All Organisms → cellular organisms → Bacteria1373Open in IMG/M
3300028784|Ga0307282_10176796All Organisms → cellular organisms → Bacteria1016Open in IMG/M
3300028784|Ga0307282_10577490All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium545Open in IMG/M
3300028787|Ga0307323_10121519All Organisms → cellular organisms → Bacteria940Open in IMG/M
3300028799|Ga0307284_10291158All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales655Open in IMG/M
3300028802|Ga0307503_10252941All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria862Open in IMG/M
3300028807|Ga0307305_10026752All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2621Open in IMG/M
3300028811|Ga0307292_10343929All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium629Open in IMG/M
3300028819|Ga0307296_10069314All Organisms → cellular organisms → Bacteria1872Open in IMG/M
3300028828|Ga0307312_10885783All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia591Open in IMG/M
3300028880|Ga0307300_10188427All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum664Open in IMG/M
3300028880|Ga0307300_10344548All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia513Open in IMG/M
3300028884|Ga0307308_10205562All Organisms → cellular organisms → Bacteria944Open in IMG/M
3300031226|Ga0307497_10103499Not Available1113Open in IMG/M
3300031226|Ga0307497_10727115All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300031354|Ga0307446_1061360Not Available1069Open in IMG/M
3300031903|Ga0307407_10352582All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1042Open in IMG/M
3300033550|Ga0247829_10111250All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Rathayibacter → unclassified Rathayibacter → Rathayibacter sp. AY1B72078Open in IMG/M
3300033550|Ga0247829_11471019All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia562Open in IMG/M
3300034001|Ga0334919_084204Not Available523Open in IMG/M
3300034143|Ga0334961_074206All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium595Open in IMG/M
3300034377|Ga0334931_048208Not Available948Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil26.21%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil16.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.83%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.88%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost3.88%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.91%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.91%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.91%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.94%
Sub-Biocrust SoilEnvironmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil1.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.94%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.97%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.97%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh0.97%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.97%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.97%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.97%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.97%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.97%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.97%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.97%
Hypolithic BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust0.97%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.97%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere0.97%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.97%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.97%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000880Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003203Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300003373Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005168Soil and rhizosphere microbial communities from Laval, Canada - mgLPCEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300012019Permafrost microbial communities from Nunavut, Canada - A7_5cm_12MEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300013765Permafrost microbial communities from Nunavut, Canada - A30_80cm_6MEnvironmentalOpen in IMG/M
3300013768Permafrost microbial communities from Nunavut, Canada - A35_65cm_0MEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014881Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1DaEnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015051Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300019884Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2EnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300022880Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6EnvironmentalOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028715Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203EnvironmentalOpen in IMG/M
3300028717Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031354Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1603-20EnvironmentalOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300034001Biocrust microbial communities from Mojave Desert, California, United States - 15HMCEnvironmentalOpen in IMG/M
3300034143Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 57SNSEnvironmentalOpen in IMG/M
3300034377Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNSEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
AL20A1W_138471013300000880PermafrostVLVHPAGNSDIAVACARYRDLLVDQSSFSSMTFEELLDADALQPQTTAALRDRYVPR*
JGI10216J12902_10281153013300000956SoilWGRYVVVHPAGNSDVAEACARYRALLVDQSTFSSVTVEDLLDAGALPTPTVAALRDRYIPR*
JGI10216J12902_11714866723300000956SoilFIVVHPAGNTDFADACSRYRSLLVDQSTFGSATVEDLLDADVLPHRTTTALRERYLPG*
JGI25406J46586_1015246413300003203Tabebuia Heterophylla RhizosphereAGNSDYAELCARYRTLLEDQSTFSSVTLEELLDAGALPEPTVAALRDRYLPP*
JGI25407J50210_1005119213300003373Tabebuia Heterophylla RhizosphereHPAGNSDLAEACARYRALLADQSTFASVTLEALLDAGALPAPTVAALRDRYLPGAA*
Ga0062589_10237918513300004156SoilAWTWGRYVVVHPAGNSDVVVACDRYRALLVDESTFSSVTLEEVLGARALPASTVAVLQDRYVPRD*
Ga0062589_10291728613300004156SoilRYVVVHPAGNSDVVAACDRYRALLVDESTFSSVTLEEVLGTRALPASTVAALQDRYVPRD
Ga0062590_10169191913300004157SoilHPTGNSDFADACARYRDLLVDQSTFSSVTLEELLGANALTPKATAALRRRYLPG*
Ga0062595_10130501823300004479SoilPAGNVDFANACERYRALLVDDSTFSSVTVEELLDGGALPAPTVAALRDRYIRG*
Ga0066809_1004176123300005168SoilNSDLADACARYRDLLVEQATFSSVAVEELLDANVLPARAARVLRKRYLPG*
Ga0066677_1064774023300005171SoilAGNSDYADACNRYRALLADTSTFSSTTVEELLDADALPARTATALRKRYISR*
Ga0066690_1064683913300005177SoilWGRLVVVHPAGNTDFADACSRYRALLVDQSTFASATVEEILDANVLPAHTATALRKRYIPR*
Ga0066678_1106925413300005181SoilWRWGRLVVVHPTGNTDFADACARYRDLLVDRSTFSSVTVEELLDANALPAQTTAALRDRYLPS*
Ga0070690_10080028813300005330Switchgrass RhizosphereENLDVAAACDRYRALLVDDSTFTSVTLEEILGSGALPPSTVAVLQDRYVLRD*
Ga0070705_10101275913300005440Corn, Switchgrass And Miscanthus RhizosphereGAWTWGRYLVVQPAANIDMVGLSARYGELLADPSTFASMTVQELLDPGVLTAKTTAALRDRYLDLGR*
Ga0070678_10215322323300005456Miscanthus RhizosphereDFADMCARYRALLSDETTFATVTVEELLDANVVAAKTATALRDRYLPG*
Ga0070681_1086616023300005458Corn RhizospherePAGNSDVADAVRRYRDLLVDGSTFSSVTIEELLTADVLPAKTTSALRDRYLPTPA*
Ga0070707_10089783823300005468Corn, Switchgrass And Miscanthus RhizosphereNSDVADLCARYRDLLVDGSTFHSMTLEALLDAKALPSRTIAALRGRYLPS*
Ga0070665_10096855313300005548Switchgrass RhizosphereHPTGNSDFAAMCARYRALLADETTFASVTVEELLDANVVAAKTATALRDRYLPG*
Ga0068864_10236794423300005618Switchgrass RhizospherePAGNSDFADMCARYRALLADEATFASVTVEELLDANVVAAKTATALRDRYLPG*
Ga0068866_1099843313300005718Miscanthus RhizosphereRYVIVHPAGNPDFEEACTRYRALLVDHATFSSVKVEELLETKVLPARTTKALRDRYLPS*
Ga0068860_10137191613300005843Switchgrass RhizospherePADNVDFAEASARYRALLVDSSTFASVTIEELLDPGVLPAATTAALRDRYLPS*
Ga0070717_1178616513300006028Corn, Switchgrass And Miscanthus RhizosphereAGNSDIAGLCARYAALLTDRSTFFSTTLEELLDARALPATTARALRRRYIIT*
Ga0079215_1114911113300006894Agricultural SoilTDFAEACARYRALLVDQSTFSSVTLEKLLDAGALPPPTVAALRERYIPG*
Ga0075426_1127808013300006903Populus RhizosphereDACARYRELLANEASFSSLTLEALLKARALPKATVAALRERYVPG*
Ga0075426_1131685323300006903Populus RhizosphereDNTDYAEACARYRGLLRDTSTFASVSLEECLDAPGLPAPTREALRERYLPAAS*
Ga0105245_1260985823300009098Miscanthus RhizosphereTWGRYVVVHPAENLDVATACDRYRALLVDDSTFTSVTFDEILGSGVLPPSTVAVLQDRYVLRD*
Ga0075418_1161545013300009100Populus RhizosphereVVVHPAGNSDYAEGCERYRALLANDSTFSATTLEGLLDAGVIPARTTAALRERYLPAE*
Ga0126313_1068892413300009840Serpentine SoilPAGNTDFADACARYRTLLVDHSTFSSITLEEVIDAGALPAPTLVTLRDRYIRRREEG*
Ga0126311_1009334213300010045Serpentine SoilPAGNTDYADACSGYRALLIDQSSFASATIEELLDAEVLRPQATAAFRDRYLPT*
Ga0127503_1038085523300010154SoilWGRYVVVHPAGNSDFADACTRYAGLLAERSTFASVTLEELLDSAVLPPQTAAAFRDRYILR*
Ga0134067_1037685323300010321Grasslands SoilSDFADACARYRDLLLDQSTFSSATIEELLGSGVLPARTATALRERYIPR*
Ga0134086_1048287813300010323Grasslands SoilSRAWHWGRLVVVHPADNTDFADACSRYRALLVDQSTFASATVEELLDADVVPAHTATALRERYLPSASR*
Ga0126372_1005803443300010360Tropical Forest SoilCLRRPGGRPRARLADGSTFSSVTIEELLDAGALPPKTATALRERYIPG*
Ga0120139_114567413300012019PermafrostMVHPAGNPDVADACTRYRDLLVDQSTFASVTFEELLDAGALPGQTTALLNDRYLRYRKR*
Ga0137388_1065663133300012189Vadose Zone SoilVHRDPADFADACSRYRALLVDHSTFASATVEQLLDANVLPARTATALRRRYIP
Ga0137382_1085527223300012200Vadose Zone SoilHPAGNTDFADACSRYRALLVDQSTFASVTVEELVDANLFPAHTARALRKRYISR*
Ga0137378_1073261323300012210Vadose Zone SoilVVYPAGNSDVAELCTHYAGLLVEPSTFSSTTIEQLLDAGALPAKAATALRDRYIVA*
Ga0137370_1044509533300012285Vadose Zone SoilLWRWGRYVVVHPAGNSDYGDACTRYRDLLAEESTFSSLTLDELLDADALPPSTVAPFRDRYLDG*
Ga0137367_1022368913300012353Vadose Zone SoilPSRTWRWGRLVVVHPAGNTDFADACSRYRALLVDQSTFASATVEELLDANVVPAQTATALRDRYLPS*
Ga0137369_1014318523300012355Vadose Zone SoilSWGRYVVVYPAGNSDVAEACARYRALLVDQSTFSSVSIDDLLDAGALPTPTVAALRDRYIPR*
Ga0137369_1077626413300012355Vadose Zone SoilTGNTDFADACSRYRALLVDQSTFASATVEELLDADVLPTRTATALRDRYLPAETPRT*
Ga0137369_1099762123300012355Vadose Zone SoilSWGRYVVVHPAANTDFANACARYRSLLVEQSTFGSMSLQELLDAGALPAATERALHDRYVHMSS*
Ga0137371_1092942313300012356Vadose Zone SoilAGNTDFADACSRYRALLVDQSTFSSMTLERLLEAGVLPAATALRDRYVSGYRT*
Ga0137384_1049032823300012357Vadose Zone SoilRYVVVYPAGNSDVAELCTRYTGLLVEPSTFSSTTIEQLLDAGALPAKAATALRDRYIVA*
Ga0137368_1035203413300012358Vadose Zone SoilNCDVVDACARYRTMLADEATFATMTLEHLLDTGNLPWPTVAALRDRYLTG*
Ga0137385_1084614423300012359Vadose Zone SoilELCTHYAGLLVEPSTFSSTTIEQLLDADALPQDTATALRDRYIVA*
Ga0137373_1003570583300012532Vadose Zone SoilVVVHPAGNTDFADACSRYRALLVDQSTLASLTVEELLDADVLPAGTATALRDRYPPS*
Ga0157302_1019197413300012915SoilVATACDRYRALLVDDSTFTSVTFDEILGSGALPHSTVAVLQDRYVLRD*
Ga0137407_1222138123300012930Vadose Zone SoilVVVHPAGNTDFADACGRYRALLVDQSTFASATVEELLDANVVPAQTATALRARYLRSPAAAGAQSMVVM*
Ga0137410_1073407333300012944Vadose Zone SoilVHPAGNTDFADACSRYRALLVDQSTFASATLEELIDANVFPAHTATALRDRYLTS*
Ga0164300_1012779813300012951SoilRFVVVHPAGNLDYDEACTRYRDLVVDPSTVASVTVENLPDADALPAPTTAALRERYIPR*
Ga0134077_1047340913300012972Grasslands SoilPSRAWHWGRLVVVHPADNTDFADACSRYRALLVDQSTFASATVEELLDADVVPAHTATALRERYLPSASR*
Ga0164304_1179150623300012986SoilRFVVVHPADNVQYDEACARYRDLVVDPSTFASVTVEELLDADVLPAPTTAALRERYIPR*
Ga0157375_1059040213300013308Miscanthus RhizosphereRYVVVHPGGNSDFADMCVRYRALLADEATFASVTVEELLDANVVAAKTATALRDRYLPG*
Ga0120172_103354123300013765PermafrostVVHPAGNPDIAGACARYRDLLVDDSSFSSMTVEELLDADALPPRTTAALRDRYLPR*
Ga0120155_119017823300013768PermafrostSWGRYVLVPPAGNSDIAVACARYRDLLVDQSSFSSMTFEELLDADALQPQTTAALRDRYLPR*
Ga0163163_1061063413300014325Switchgrass RhizosphereRYVVVHPADNVDFAEASARYRALLVDPSTFASVTVEELLDPGVLPAATTAALRDRYFPG*
Ga0180094_115534723300014881SoilVFVHPADNSDFADACARYRGLLADQSTFSSLTIEELLAAEIIPAATAAAFRE
Ga0157376_1135675733300014969Miscanthus RhizosphereVVHPTGNSDFAAMCARYRALLADETTFASVTVEELLDANVVAAKTATALRDRYLPG*
Ga0137414_125207033300015051Vadose Zone SoilLGTARRRASTGNSDFADACARYRALLVDESTFASRTIEQLLDSAILPAATVAALRNRYLGY*
Ga0173483_1070979123300015077SoilASGAWTWGRYVVVHPAENLDVATACDRYRALLVDDSTFTSVTFDEILGSGALPHSTVAVLQDRYVLRD*
Ga0137409_1030681613300015245Vadose Zone SoilPSRTWRWGWFVVVHPAGKTDFAEACHRYRDLLVDQSTFSSITVEELLDADVLPAPTATALRKRYIPR*
Ga0184605_1037518813300018027Groundwater SedimentSDFADACSRYRALLVDQSTFASATVEELLDANVVPAHMATALRDRYLPS
Ga0184619_1007032343300018061Groundwater SedimentGRLVVVHPAGNSDFADACSRYRALLVDQSTFASATVEELLGGTILPAQTTAALRDRYLPG
Ga0184619_1019405913300018061Groundwater SedimentTWTWGRYVVVHPAGNSDFAEACNRYRDLLADQSTFSSMTVEELLDADVLPAHTATALRDRYIPR
Ga0184618_1011676013300018071Groundwater SedimentMLQHPSRAWRWGRLVVVHPAGNSDFADACSRYRALLVDQSTFASATVEELLDGAILPAQTTAALRDRYLPG
Ga0190272_1042841623300018429SoilGRCVFLHPADNSDFAEACARYRGLLVDESTFSSLTIEALLAAEVLPASTGAAVRERYL
Ga0193741_115970613300019884SoilRLVVVHPAGNTDYADACDRYRSLLADGSSFASSTLEELLDARALTAATTLALRERYLLDAVSS
Ga0193747_109148413300019885SoilHPAGNSDFADACARYRELLVDQSTFSSVTVEELLDAKVLPVPTAAALRERLLPS
Ga0193730_113413013300020002SoilHPTGNSDFADACARYRELLVDQSTFSSVTVEELLDAKVLPARTTAALRERLLLT
Ga0210382_1006597313300021080Groundwater SedimentRLVVVHPAGNSDFADACSRYQDLLLDQSTFSSVTVEELLDADVLPVQTTAALRDRYLP
Ga0222622_1138656113300022756Groundwater SedimentDFAGACSRYRALLVEQATFSSVKVEELLKTNALPAKTTAALRDRFLPD
Ga0247792_111800713300022880SoilSGAWTWGRYVVVHPAENLDVATACDRYRALLVDDSTFTSVTFDEILGSGALPHSTVAVLQDRYVLRD
Ga0209647_101556013300026319Grasslands SoilAGNTDVAAACARYRALLADQSSFACVTVEELLDAGALPPTTVAALRDRYLPG
Ga0209059_130966613300026527SoilSMLQHPSRTWRWGRCVVVYPAGNSDYADACNRYRALLADTSTFSSTTVEELLDADALPARTATALRKRYISR
Ga0209156_1036828713300026547SoilVVVHPAGNSDFADACARYRDLLLDQSTFSSATIEELLGSGVLPARTATALRERYIPR
Ga0307293_1004408513300028711SoilRWGRLVVVHPAGNSDFADACSRYQDLLLDQSTFSSVTVEELLDADVLPVQTTAALRDRYL
Ga0307313_1015995513300028715SoilLVVVHPAGNSDFADACSRYRALLVDQSTFASATVEELLDGAILPAQTTAALRDRYLPG
Ga0307298_1007618613300028717SoilDFADACSRYRALLVDQSTFASVTVEELLDASVLPARTATALRDRYLPG
Ga0307307_1018338923300028718SoilHPAGNSDFADACARYRELLVDQSTFSSVTVEELLDAKVLPARTTAALRERLLLPS
Ga0307301_1004349313300028719SoilPAGNTDFADVCSRYQALLVEQSTFASATVEELLDANVVPARTSRALRDRYLPD
Ga0307282_1017679613300028784SoilVVHPAGNSDFADACSRYRALLVDQSTFASATVEELLGGTILPAQTTAALRDRYLPG
Ga0307282_1057749023300028784SoilAGNTDFADACSRYGALLVDQSTFASATIEDLLDANVVPARTAAALRDRYLPG
Ga0307323_1012151933300028787SoilVVHSAGNTDFADACSRYGALLVDQSTFASATIEDLLDANVVPARTAAALRDRYLPG
Ga0307284_1029115823300028799SoilNTDVAEACARYRALLVDQSSFSSVTVEELLDAGALPAPTVAAFRDRYIPG
Ga0307503_1025294123300028802SoilPAGNSDVAAACDHYRALLVDESTFSCVTLEEVLGTGALPASTVAALHDRYVTRD
Ga0307305_1002675213300028807SoilWGRLVVVHPAGNSDFADACSRYRALLVDQSTFASATVEELLDGAILPAQTTAALRDRYLP
Ga0307292_1034392913300028811SoilHSAGNTDFADACSRYGALLVDQSTFASATIEDLLDANVVPAKTAAALRDRYLPG
Ga0307296_1006931453300028819SoilRLVVVHPAGNSDFADACSRYRALLVDQSTFASATVEELLDGAILPAQTTAALRDRYLPG
Ga0307312_1088578313300028828SoilNTDFADACSRYRALLVDQSTFASATVEELLDAAAVPAQTAAALRDRYLPG
Ga0307300_1018842713300028880SoilGRLVVVHPAGNSDFADACSRYRALLVDQSTFASATVEELLDANVVPARTSRALRDRYLPD
Ga0307300_1034454813300028880SoilVHPAGNTEVADACARYRALLADQSTFASTTVEGLLDAAALPTPTVRTLRDRYLPG
Ga0307308_1020556213300028884SoilAWRWGRLIVVHPAGNTDFADACSRYRALLVDQSTFASVTVEELVDANLFPAHTARALRKRYVSR
Ga0307497_1010349923300031226SoilVIVHPAGNPDFEEACTRYRALLVDHATFSSVKVEELLETKVLPARTTKALRDRYLPS
Ga0307497_1072711513300031226SoilMWTFGRYVVVYLAGNTDLAEACSRYRALLVEQTTFSSVKVEVLLKTNALPAKTAAALRDRYLPS
Ga0307446_106136013300031354Salt MarshAGNTDVADLCARYRALLADTATFSSVTLEELLAAGALPPTTVAALRSRYLED
Ga0307407_1035258223300031903RhizosphereGNADLAGACARYRDLLVDSSTFSAATVEELLDAKVLPARTTAGLRRRYLPG
Ga0247829_1011125023300033550SoilNADIANACARYRDLLRDQSTFSSATVEELLDAKVLPARTTAALRRRYLPG
Ga0247829_1147101913300033550SoilTDFADACATYRGLLVDDSTFASATVEQLLGGGVLPEAMVAAFRGRYLPEPDA
Ga0334919_084204_3_1673300034001Hypolithic BiocrustHPAGNSDYTELCARYRTLLEDQSTFSSVTVEELLDAGALPETTVAALRDRYLPM
Ga0334961_074206_416_5953300034143Sub-Biocrust SoilASSSSTPAGNTDYAGACARYRTLLADQSTFSPVPLEELLDAGALPPPTVAALRDRYLPG
Ga0334931_048208_692_9073300034377Sub-Biocrust SoilMLQHVSGSWTRGRCVVVHPAGNSNVAEACARYRALLVDQSPFSSVTLEKLPDAGVLPMPTVAAFRDRYIPG

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