Metagenome / Metatranscriptome Family F098816

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098816
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	72 residues
Representative Sequence	MTFVGSVHNPKIMLGMLVKVLCGDAIATRRRLPREGNVTFEDLMRGTSDFDVRTVTIEGLTSVR
Number of Associated Samples	92
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.53 %
% of genes near scaffold ends (potentially truncated)	86.41 %
% of genes from short scaffolds (< 2000 bps)	91.26 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.058 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (44.660 % of family members)
Environment Ontology (ENVO)	Unclassified (38.835 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.485 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.52% β-sheet: 0.00% Coil/Unstructured: 68.48%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF10073	DUF2312	2.91
PF13649	Methyltransf_25	2.91
PF08241	Methyltransf_11	2.91
PF00195	Chal_sti_synt_N	2.91
PF01165	Ribosomal_S21	2.91
PF03699	UPF0182	1.94
PF00578	AhpC-TSA	1.94
PF08837	DUF1810	0.97
PF07690	MFS_1	0.97
PF12706	Lactamase_B_2	0.97
PF00296	Bac_luciferase	0.97
PF03237	Terminase_6N	0.97
PF02796	HTH_7	0.97
PF13577	SnoaL_4	0.97
PF00374	NiFeSe_Hases	0.97
PF02797	Chal_sti_synt_C	0.97
PF02515	CoA_transf_3	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0332	3-oxoacyl-[acyl-carrier-protein] synthase III	Lipid transport and metabolism [I]	2.91
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	2.91
COG3424	Predicted naringenin-chalcone synthase	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.91
COG1615	Uncharacterized membrane protein, UPF0182 family	Function unknown [S]	1.94
COG0374	Ni,Fe-hydrogenase I large subunit	Energy production and conversion [C]	0.97
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.97
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.97
COG3259	Coenzyme F420-reducing hydrogenase, alpha subunit	Energy production and conversion [C]	0.97
COG5579	Uncharacterized conserved protein, DUF1810 family	Function unknown [S]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	95.15 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	89.32 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	86.41 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.94 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	86.41 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.94 %
Unclassified	root	N/A	1.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_10431416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	796	Open in IMG/M
3300004082\|Ga0062384_100397711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	887	Open in IMG/M
3300004153\|Ga0063455_100967415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	612	Open in IMG/M
3300005167\|Ga0066672_10955780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300005175\|Ga0066673_10329664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	891	Open in IMG/M
3300005332\|Ga0066388_100401771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2015	Open in IMG/M
3300005439\|Ga0070711_101399916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	608	Open in IMG/M
3300005536\|Ga0070697_100264742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1472	Open in IMG/M
3300005554\|Ga0066661_10747943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300005575\|Ga0066702_10800790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300005576\|Ga0066708_10726535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300006854\|Ga0075425_102949596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300009143\|Ga0099792_10631298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	686	Open in IMG/M
3300009143\|Ga0099792_11107732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300009143\|Ga0099792_11136020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300010046\|Ga0126384_11894296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300010358\|Ga0126370_12481332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300010361\|Ga0126378_12055784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	651	Open in IMG/M
3300010366\|Ga0126379_10239865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1777	Open in IMG/M
3300010398\|Ga0126383_10706888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1086	Open in IMG/M
3300012202\|Ga0137363_11000746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	710	Open in IMG/M
3300012203\|Ga0137399_10388500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1163	Open in IMG/M
3300012285\|Ga0137370_10377324	All Organisms → cellular organisms → Bacteria → Proteobacteria	856	Open in IMG/M
3300012683\|Ga0137398_10604323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	759	Open in IMG/M
3300012685\|Ga0137397_11247780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300012929\|Ga0137404_11732642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300012944\|Ga0137410_12057153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508	Open in IMG/M
3300012955\|Ga0164298_11518271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300012957\|Ga0164303_10301425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	945	Open in IMG/M
3300012960\|Ga0164301_11242774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300015242\|Ga0137412_10526415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	902	Open in IMG/M
3300016270\|Ga0182036_11194344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	632	Open in IMG/M
3300016341\|Ga0182035_10846080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	805	Open in IMG/M
3300016341\|Ga0182035_11069446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	717	Open in IMG/M
3300016357\|Ga0182032_10609990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	909	Open in IMG/M
3300016404\|Ga0182037_10355037	Not Available	1195	Open in IMG/M
3300016445\|Ga0182038_11097977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	707	Open in IMG/M
3300017972\|Ga0187781_11363278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300020199\|Ga0179592_10492356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300020580\|Ga0210403_10582785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	904	Open in IMG/M
3300020582\|Ga0210395_10084905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2335	Open in IMG/M
3300021171\|Ga0210405_10074597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2673	Open in IMG/M
3300021178\|Ga0210408_11070945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	621	Open in IMG/M
3300021180\|Ga0210396_10122018	All Organisms → cellular organisms → Bacteria → Proteobacteria	2352	Open in IMG/M
3300021406\|Ga0210386_10357287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1256	Open in IMG/M
3300021406\|Ga0210386_10432054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1136	Open in IMG/M
3300021474\|Ga0210390_11060596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M
3300021475\|Ga0210392_10803249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	702	Open in IMG/M
3300021478\|Ga0210402_11543472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	591	Open in IMG/M
3300022513\|Ga0242667_1026956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	636	Open in IMG/M
3300022523\|Ga0242663_1050945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	729	Open in IMG/M
3300022528\|Ga0242669_1007060	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300022529\|Ga0242668_1061241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	694	Open in IMG/M
3300022716\|Ga0242673_1120989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300022717\|Ga0242661_1101930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300022724\|Ga0242665_10019826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1531	Open in IMG/M
3300024288\|Ga0179589_10479818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	575	Open in IMG/M
3300024347\|Ga0179591_1022317	All Organisms → cellular organisms → Bacteria	3253	Open in IMG/M
3300025915\|Ga0207693_11433220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M
3300025934\|Ga0207686_11615900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	535	Open in IMG/M
3300026489\|Ga0257160_1026184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	945	Open in IMG/M
3300026557\|Ga0179587_10489226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	807	Open in IMG/M
3300027548\|Ga0209523_1104006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300027610\|Ga0209528_1042502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1007	Open in IMG/M
3300027882\|Ga0209590_10302183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1028	Open in IMG/M
3300031544\|Ga0318534_10611005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300031561\|Ga0318528_10550956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300031573\|Ga0310915_10661770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	738	Open in IMG/M
3300031668\|Ga0318542_10251723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	899	Open in IMG/M
3300031668\|Ga0318542_10612583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300031680\|Ga0318574_10486956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	722	Open in IMG/M
3300031719\|Ga0306917_11387174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300031753\|Ga0307477_10614745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	732	Open in IMG/M
3300031754\|Ga0307475_11552414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300031768\|Ga0318509_10409580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	758	Open in IMG/M
3300031771\|Ga0318546_11000877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300031777\|Ga0318543_10188757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	914	Open in IMG/M
3300031781\|Ga0318547_10041499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2433	Open in IMG/M
3300031796\|Ga0318576_10108822	All Organisms → cellular organisms → Bacteria → Proteobacteria	1271	Open in IMG/M
3300031796\|Ga0318576_10560392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M
3300031805\|Ga0318497_10328963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	852	Open in IMG/M
3300031833\|Ga0310917_10316258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1057	Open in IMG/M
3300031880\|Ga0318544_10057245	All Organisms → cellular organisms → Bacteria → Proteobacteria	1418	Open in IMG/M
3300031880\|Ga0318544_10223322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	728	Open in IMG/M
3300031912\|Ga0306921_12549908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300031942\|Ga0310916_10156646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1883	Open in IMG/M
3300031947\|Ga0310909_10566437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	950	Open in IMG/M
3300031947\|Ga0310909_10898586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	727	Open in IMG/M
3300031947\|Ga0310909_11655381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300031954\|Ga0306926_12870655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300031959\|Ga0318530_10261086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	714	Open in IMG/M
3300031981\|Ga0318531_10497126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300032001\|Ga0306922_11738877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300032052\|Ga0318506_10183949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	920	Open in IMG/M
3300032059\|Ga0318533_10085819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2157	Open in IMG/M
3300032089\|Ga0318525_10657615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300032261\|Ga0306920_100042384	All Organisms → cellular organisms → Bacteria → Proteobacteria	6586	Open in IMG/M
3300032261\|Ga0306920_103701403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300032515\|Ga0348332_13126721	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300033289\|Ga0310914_10796872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	843	Open in IMG/M
3300033290\|Ga0318519_10176800	All Organisms → cellular organisms → Bacteria → Proteobacteria	1207	Open in IMG/M
3300033290\|Ga0318519_10645541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	645	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.06%
Host-Associated	Host-Associated	1.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.12%
Aquatic	Environmental → Aquatic	1.94%
Plants	Host-Associated → Plants	1.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.15%
Freshwater	Environmental → Aquatic → Freshwater	1.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.94%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.44%
Loam	Environmental → Terrestrial → Soil → Loam	8.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.97%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	58.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.91%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.97%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	44.66%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.91%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.97%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022513	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_104314162	3300004080	Bog Forest Soil	LEIDRRSGASGTVLLIFVGSIHNPKIMLGMLVEVLCRDPIATGRRLPREGNVTFEDLMRGASDFDVRTVT
Ga0062384_1003977112	3300004082	Bog Forest Soil	LEIDRRSGASGTVLLIFVGSIHNPKIMLGMLVEVLCRDPIATGRRLPREGNVTFEDLMRGASDFDVRTVTI
Ga0063455_1009674151	3300004153	Soil	MTFVSSVHNPIIMLGMLVKVLRGDPIATRRRLPREGNVTFEDLMRGASDFDVRTITIEGLRSVRYLLPITVRVVTVIATI*
Ga0066672_109557802	3300005167	Soil	MLMAFVSSVHNPKIMLGMLIKVLCGDSIATRRRLPCEGNVTFEDLMRAASDFDVRTVTIE
Ga0066673_103296642	3300005175	Soil	VLLTFISSVHYPKVMLGMLVEVLCRNSIATRRRFPRKGNVAFEDLMRRASDFDVRTVTIETLTSRRHLLPIAVGIVTVI
Ga0066388_1004017711	3300005332	Tropical Forest Soil	MVEMTFVSSLHNPKIMLGMLVEVLCGHSIATRRCLLREGNVTFEDLMRGASDLDVRTVTIEIVTSLRYLLPITVKIVTV
Ga0070711_1013999161	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTFVGSVHNPKIMLGMLVKVLCGDAIATRRRLPREGNVTFEDLMRGTSDFDVRTVTLEILTSMRYLLPI
Ga0070697_1002647423	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MVEMTFVSSVHNPKIMLGMLVKVLCGDSIATRRCLPREGNVTFEDLMRGASDLDVRTVT
Ga0066661_107479432	3300005554	Soil	VLLTFIGSVHYAKVMLGMLVEVLCRDAVATGRRLPRKGDVAFENLMRRTSDFDVRTVTIE
Ga0066702_108007902	3300005575	Soil	MLMAFVSSVHNPKIMLGMLIKVLCGDSIATRRRLPCEGNVTFEDLMRAASDFDVRTVTIEGLTPVRYLLPITVGSIA
Ga0066708_107265352	3300005576	Soil	MTFVGSVHNPKIMLGMLVKVLCGDAIATRRRLAREGDVTFEDLMRGTSDFDVRTVTLEIPTSMRYLLPITVGIVAVIATM
Ga0075425_1029495962	3300006854	Populus Rhizosphere	PKIMLGMLIKVLRGHSIATGRRLPCKGNIAFEELMGGASDPDMQTGTIKIVTSLRYLPPITVRIVTVITTMR*
Ga0099792_106312981	3300009143	Vadose Zone Soil	LEIGRRGGARDTVLMTLVSSVHNPKIMLGMLVKVLRGDSIATRRRLPREGNVTFEDLRSVASDFDVRTVA
Ga0099792_111077321	3300009143	Vadose Zone Soil	MTFVSSVHNPIIMLGMLVKVLRGDPIATRRRLPREGNVTFEDLMRGASDFDVRTITIEG
Ga0099792_111360201	3300009143	Vadose Zone Soil	MVGMTFVSSVHNPKIMLGMLVKVLCGDAIVTRRSLPREGNVTFKDLMRSAPDLDIRTVTIEGLTSARYLLPITVGSVTVIA
Ga0126384_118942962	3300010046	Tropical Forest Soil	HNPKIMLGMLVKVLCSNSIATRRRLPRESNVTFEDLMRRASDLDVRTVTFEVLTSM*
Ga0126370_124813321	3300010358	Tropical Forest Soil	MALVTFGSSVINAKIMLGMLVKVFRGDSIATRRRLPCEGDVTFEDLMSATSNFDVRTVTIEGLTSVRYLL
Ga0126378_120557841	3300010361	Tropical Forest Soil	MVLVTFGSSVLNAKIMLGMLVKVFRGDSIATCRRLPREGDVTFEDLMSATSNFDVRTVTIEGLTSVRYL
Ga0126379_102398653	3300010366	Tropical Forest Soil	MVLVTFGSSVINAKIMLGMLVKVFRGDSIATRRRLPCEGDVTFDDLMSATSNFDVRTVTIEGLTSVRYLLP
Ga0126383_107068881	3300010398	Tropical Forest Soil	MCRRDWVGGVVLVTLGSSVHNAKIMLGVLVKVLRGDSIAARRRLAREGKVTFEDLMRATSNFDVRTVTIKGLTYWGLTN
Ga0137363_110007461	3300012202	Vadose Zone Soil	MLMTLVSGVHDPKIMVGMLVKVLRGDSIATRGRLARKGNVTFEDLMRGTSDFDVRTVTIEGLTSVRYLLPMPVGIV
Ga0137399_103885001	3300012203	Vadose Zone Soil	MPMTVFSGVHDPKIMVGMLVKVLRGDSIATRGRLARKGNVTFEDLMRGTSDFDVRTVTIEGLTSVRYLLPMPVGIVTVIATMVS*
Ga0137370_103773241	3300012285	Vadose Zone Soil	MLSMLVKVLCGDPIVTRRRLPPKGNVTFEDLMSGTSDFDVRTITIEGLTSVLYLLPIAVGIVTVIATIRSPGLS
Ga0137398_106043232	3300012683	Vadose Zone Soil	VLLTFVGSVHNPKIMLGMLVKVLCRYSIAARRRLPREGNVTFEDLMRSASDFDVRTVTIETLTSWR*
Ga0137397_112477801	3300012685	Vadose Zone Soil	MVLRTFVTSVHNPKIMLRVLIKVLCGDAIATRRRLPREGNVAFEYLMSGAPDFDVRSITIEGVTSTR*
Ga0137404_117326421	3300012929	Vadose Zone Soil	MLMTLVSGVHDPKIMVGMLVKVLRGDSIATRGRLAREGNVTFEDLMRGTSDFDVRTVTIEGLTSVRYLLPMP
Ga0137410_120571531	3300012944	Vadose Zone Soil	LEIGRRGGARDTVLMTLVSSVHNPKIMLGMLVKVLRGDSIATRRRLPREGNVTFEDLRRAASDFDVRTVAIE
Ga0164298_115182711	3300012955	Soil	MTFVGSVHNPKIMLGMLVKVLCGDAIATRRRLPREGNVTFEDLMRGTSDFDVRTVTLEILTSMRYLLPIMVGIVAVIATMRS
Ga0164303_103014251	3300012957	Soil	MTFVGSVRNPKIMLGMLVKVLCGDAIATRRRLPREGNVTFEDLMRGTSDFDVRTVTLEIL
Ga0164301_112427741	3300012960	Soil	MTFVGSVHNPKIMLGMLVKVLCGDAIATRRRLPREGNVTFEDLMRGTSDFDVRTVTIEGLTSVR*
Ga0137412_105264152	3300015242	Vadose Zone Soil	MVEMTFVSSIHNPKIMLGMLVKVLCGHSIATRRCLPCEGNVTFEDLMRGASDLDVRTVTIEIVTSLRY
Ga0182036_111943441	3300016270	Soil	VLMTFVGSVHNPKIMLGMLVKVLCGDAIAARRRLPREGDVTFEDLMSVASDFDIRTVTFEGLTSVRNRLPITVGIVTVIA
Ga0182035_108460802	3300016341	Soil	VLMTFVGSVHNPKIMLGMLVKVLCGDAIAARRRLPREGDVTFEDLMSVASDFDIRTVTFEGL
Ga0182035_110694461	3300016341	Soil	VVLVTFGSSVNNAKIMLGMLVKVLRGDSIATRRRLARKGNVTFEDLMRATPNFDVRTVTIEG
Ga0182032_106099901	3300016357	Soil	VVLVTFSRSVHNAKIMLGMLVKVLRGDSIATRRRLAREGDVTFEDLMRATSNFDVRTVTIEGLTSVRHLLPIT
Ga0182037_103550371	3300016404	Soil	VVLVTFGSSVHDAKIMLGMLVKVLRGDSIATRRRLAREGDVTFEDLMRATSNFDVRTVTIEGLTSVRHLLPITVGIIVTV
Ga0182038_110979771	3300016445	Soil	MVLVTFGSSVFDAKIMLGMLVKVLRGDSIATRRRLPREGDVTFEDLMSATSNFDVRTVTIEGLTSVRYLLPITV
Ga0187781_113632781	3300017972	Tropical Peatland	LVTFGSSVHNPKIMLGMLVKVLRGDSIATRRRLAPEGNVTFEDLMSGAANPGIATIAFKGLIMLCDSWLLLERAV
Ga0179592_104923561	3300020199	Vadose Zone Soil	MTFVGSVHNPKIMLGMLVKVLCGDAIATRRRLPREGNVTFEDLMRGTSDFDVRTVTLEILTSMRYLLPIMVGVVAVIA
Ga0210403_105827852	3300020580	Soil	MVEMTFVSSVHNPKIMLGMLVKVLCGHSIATRRCLPREGNVTFEDLMRGASDLDVRTVTIEIVTSLRYLLPITVRI
Ga0210395_100849052	3300020582	Soil	LEIGRRGGVRGALLLTFVGSINNPKIMLGMLVKVLCRDSIAARRRLPRESNVTFEDLMRSASDFDVRTVTVETLTSLR
Ga0210405_100745971	3300021171	Soil	LEIGRPGGAHRTVLLTFISSVHYPKVMLGMLIKVFRRNSVATRRRLPREGNVTFEDL
Ga0210408_110709452	3300021178	Soil	MLRMLVKVLCRDSIAISRGLSGERNVTFEDLVRAALDFDVRTVTTEGLISV
Ga0210396_101220182	3300021180	Soil	LLLTFVGSINNPKIMLGMLVKVLCRDSIAARRRLPRESNVTFEDLMRSASDFDVRTVTVETLTSLR
Ga0210386_103572871	3300021406	Soil	LLLTFVGSINNPKIMLGMLVKVLCRDSIAARRRLPRESNVTFEDLMRSASDFDVRTVTIETLTSLR
Ga0210386_104320541	3300021406	Soil	VLLTFVGSVHNPKIMLGMLVKVLCRDSIAARRRLPREGNIPFEDLMRRASDFDVRTVTIEILTSRRHLLPIAVGIITVITT
Ga0210390_110605962	3300021474	Soil	MTFVGSFHHAKIMLGVLVKVLCVDAIATCRRLPTKGDVAFKDLMRVASDFDVGTVTIECLTSVRYLLPITVGIITVIATML
Ga0210392_108032491	3300021475	Soil	MTFVGSVHNPKIMLGMLVKVLCGDAIATRRRLPREGNVTFEDLMRGTSDFDVRTVTLEILTSMRYLLPIMVGIVP
Ga0210402_115434722	3300021478	Soil	LLLTFVGSINNPKIMLGMLVKVLCRDSIAARRRLPRESNVTFEDLMRSASDFDVRTVTVETLTSL
Ga0242667_10269561	3300022513	Soil	MTFVGSVHNPKIMLGMLVKVLCGDAIATRRRLPREGNVTFEDLMRGTSDFDVRTVTLEILTSMRYLLPIMVGIVAVIA
Ga0242663_10509452	3300022523	Soil	RSGGGHDTVLMTFVGSAHNPKIMLGMLVKVLCGDAIATRRRLPREGNVTFEDLMRGTSGFDVRTVTLEILTSMR
Ga0242669_10070603	3300022528	Soil	KIMLGMLVKVLCRDSIAARRRLPRESNVTFEDLMRSASDFDVRTVTVETLTSLR
Ga0242668_10612411	3300022529	Soil	MVEMTFVSSVHNPKIMLGMLVKVLCGHSIATRRCLPREGNVTFEDLMRGASDLDVRTVTIEIVTSLRYLLPITVRIVTVI
Ga0242673_11209891	3300022716	Soil	MTFVGSVHNPKIMLGMLVKVLCGDAIATRRRLPREGNVTFEDLMRGTSDFDVRTVTLEILTSMRYLLPIMVGI
Ga0242661_11019301	3300022717	Soil	MTFVGSVHNPKIMLGMLVKVLCGDAIATRRRLPREGNVTFEDLMRGTSDFDVRTVTLEILTSMR
Ga0242665_100198262	3300022724	Soil	MTFVGSVHNPKIMLGMLVKVLCGDAIATRPRLPREGNVTFEDLMRGTSDFDVRTVTLEILTSMR
Ga0179589_104798181	3300024288	Vadose Zone Soil	MVEMTFVSSVHNPKIMLGMLVKVLCGHSIATRRCLPCEGNVTFEDLMRGASDLDVRTVTIEIVTSLRY
Ga0179591_10223171	3300024347	Vadose Zone Soil	MTFVGSVHNPKIMLCMLIKVLCSDSIATRRRLPSEGNVTFEDLMRGASDFDGPLLSR
Ga0207693_114332201	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSFVSSVHNPKIMFGMLAKVLCSNSIATRRRLPREGNVTFEDLMWRASDFDVRTVTVEILTSMRYRLPMTVGIVTVITTIRPGCPVL
Ga0207686_116159001	3300025934	Miscanthus Rhizosphere	MTFVGSVHNPKIMLGMLVKVLCGDAIATRRRLPREGNVTFEDLMRGTSDFDVRTVTLEILTSMRYLLPIMVGIVAVIATMRSSSLP
Ga0257160_10261842	3300026489	Soil	MTFVGSVHNPKIMLGMLVKVLCGDAIATRRRLPREGNVTFEDLMRGTSDFDVRTVTLEILTSMRYLLPIVVG
Ga0179587_104892262	3300026557	Vadose Zone Soil	MVGMTFVSSVHNPKIMLGMLVKVLCGHAIATRRRLPREGNVTFKDLMRGASNFDVRTITVEGLISLRYVLPITVGIAT
Ga0209523_11040061	3300027548	Forest Soil	KIMLGMLVKVLCGDAIAARRRLPREGNIAFEDLMRGTSDFDVRTVTIGGPTSLR
Ga0209528_10425021	3300027610	Forest Soil	MPMTLVSGVHDPKIMVGMLVKVLRGDSIATRGRLARKGNVTFEDLMRGTSDFDVRTVTIEGLTSV
Ga0209118_10368873	3300027674	Forest Soil	MLGMLIKVLCGDSIATRRRLPSEGNVTFEDLMSGASNFDVRTVTIEG
Ga0209590_103021832	3300027882	Vadose Zone Soil	MTFVSGVHNPKIMLGMLVKVLRGDSIATRRRLARKGNVTFEDLMRATSDFDVRTVTIEGLTSVRYL
Ga0318534_106110051	3300031544	Soil	VVLVTFGSSVHNPKIMLRVLVKVLRGYSIATRRRLARKGNITFEDLMRATSDFDVRTVTIEGLTSVR
Ga0318528_105509562	3300031561	Soil	MVLVTFGSSVFDAKIMLGMLVKVLRGDSIATRRRLPREGDVTFEDLMSATSNFDVRTVTIEGLTSVRYLLPITVSIITVMAAMRSA
Ga0310915_106617702	3300031573	Soil	VVLVTFGSSVNNAKIMLGMLVKVLRGDSIATRRRLARKGNVTFEDLMRATPNFDVRTVTIEGLTSVRYLLPVTVGIITVMAT
Ga0318542_102517232	3300031668	Soil	MLLMTFASSVHNPKIMLRMLVKVLCGDPIATRRRLPPKGNVAFEDLTSGVADFDV
Ga0318542_106125831	3300031668	Soil	MSFFSSVHNPKIMLRMLVKVLRSNSIATRRSLPREGNVTFADLMRRASDFDVRTVTIEILPSVRCRLPITVGIVTVIT
Ga0318574_104869562	3300031680	Soil	VVLVTFGSSVHNAKIMLGMLVKVLRGDSIATRRRLAREGNVTFEDLMRATPNFDVRTVTIEGLTSVRYLSPVTVGII
Ga0306917_113871741	3300031719	Soil	VVLVTFGSSVHNPKIMLRVLVKVLRGYSIATRRRLARKGNITFEDLMRATSDFDVRTVTIEGLTSVRYLLS
Ga0307477_106147451	3300031753	Hardwood Forest Soil	RHLRFEIGRRGWAGGTMLMTLVSGVHDPKIMVGMLVEVLRGDSIATRGRLARKGYVTFEDLMRGPSDFDVRTVTIGGPTSLR
Ga0307475_115524141	3300031754	Hardwood Forest Soil	MLCMLVKVLCGHAIATRRRLPREGSVTFEDLMRGASDLDVRTVTLEIVTSLRDLWPITVRIVTV
Ga0318509_104095802	3300031768	Soil	MSFVSSVHNPKIMLGMLVKVLCGDSIATRRCLPRECNVTFEDLMRVASDFDVRTVAIEGLTSVRYLLPITVGMITVIATMLSAGL
Ga0318546_110008771	3300031771	Soil	VVLVTFGSSVNNAKIMLGMLVKVLRGDSIATRRRLARKGNVTFEDLMRATPNFDVRTVTIEGLTSVRYLLPVTVGIITVMATMRSA
Ga0318543_101887571	3300031777	Soil	MLGMLIKVLCGHAIATRRRLSREGSVTFEHLMRGASDLDVRSGTIETVTSLRDLWPITVRIVTVI
Ga0318547_100414991	3300031781	Soil	MLLMTFASSVHNPKIMLRMLVKVLCGDPIATRRRLPRKGNVTFEDLMSGASDFDVRTITIKGLTSVRYLL
Ga0318576_101088224	3300031796	Soil	VVLVTFGSSVHDAKIMLGMLVKVLRGDSIATRRRLAREGDVTFEDLMRATSNFDVRTVTIEGLTSVRYLLP
Ga0318576_105603921	3300031796	Soil	VVLVTFGSSVHNAKIMLGMLVKVLRGDSIATRRLFAREGNVTFEDLMRATPNFDVRTVTIEGLTSVR
Ga0318497_103289631	3300031805	Soil	VVLVTFSRSVHNAKIMLGMLVKVLRGDSIATRRRLAREGDVTFEDLMRATSNFDVRTVTIEGLTSVRYLLPIT
Ga0310917_103162581	3300031833	Soil	MGGLVLVTFRSSVHNAKIMLGMLVKVLRGDAISTRRRLAREGNVTFEDLMRATSNFDVRAVTIEDLTSVRHLLPITVGLL
Ga0318544_100572454	3300031880	Soil	VVLVTFGSSVHDAKIMLGMLVKVLRGDSIATRRRLAREGDVTFEDLMRATSNFDVRTVTIEGLTSVRHLLPITVGIIVTVMATVRS
Ga0318544_102233222	3300031880	Soil	VLVTFRSRVHNAKIMLGMLVKILRGDSIATRRRLAREGNVTFEDLMRATPNFDVRTVTIEGLTSVRY
Ga0306921_125499081	3300031912	Soil	VLVTFGSSVHNAKIMLGMLVKVLRADSIATRRRLAREGNVTFKDLMRATSNFDVRTVTIEVLTSVRYLLPVTIGIIT
Ga0310916_101566461	3300031942	Soil	VLVTFRSRVHNAKIMLGMLVKVLRGDSIATGRRLAREGNVTFEDLMRATLNFDVRAVTIEGLTSVWYLLSITVGIITVMATM
Ga0310909_105664372	3300031947	Soil	VVLVTFGGSVHNAKIMLGMLVKVFRGDSIATRRRLAREGKVTFKDLMRATSNFDVRTVTIEGLTSVRHLLPITVGIIITVMATMRS
Ga0310909_108985861	3300031947	Soil	MGGLVLVTFRSSVHNAKIMLGMLVKVLRGDAISTRRRLAREGNVTFEDLMRATSNFDVRAVTIEDLTSVRHLLPITVGIIITVMAT
Ga0310909_116553811	3300031947	Soil	MVLVTFGSSVFDAKIMLGMLVKVLRGDSIATRRRLPREGDVTFEDLMSATSNFDVRTVTIEGLTSVRYLLPITVS
Ga0306926_128706551	3300031954	Soil	VVLVTFGSSVNNAKIMLGMLVKVLRGDSIATRRRLARKGNVTFEDLMRATPNFDVRTVTIEGLTSVRYLLPVTVGIITVMATMRS
Ga0318530_102610861	3300031959	Soil	MLVTLGGSVHNAKIMLGMLVKVLHDDSIATRRRLEREGNVTFEDLMRATSNFDVRTVTIESLTSVRHLLPITVGIITVM
Ga0318531_104971261	3300031981	Soil	VVLVTSASSVHNAKIMFGMLVKVLCGDSIATDRRFAREGNVAFEDLMRATSNFDVRTVTIVGLTSVRYLLPIMVGIITVMAAMR
Ga0306922_117388772	3300032001	Soil	VLMTFVSSVPNPKIMLGMLVKVLCGDAIATRRRLPREGNVTFEDLMRGTSDFDVRTVTLEILTSMRYLLPIMVGIVAVI
Ga0318506_101839492	3300032052	Soil	VVLLTFGSSVHNPKIMLGMLVKVLRGDSIATRRRLAREGNVTFKDLMRATSNFDVRTVTFERLTSWRYLLPISVGIITVMATMR
Ga0318533_100858194	3300032059	Soil	MSFVSSVHNPKIMLGMLVKVLCGDSIATRRCLPRECNVTFEDLMRVASDFDVRTVAIEGLTSVRYLLPIMVGMITVI
Ga0318525_106576151	3300032089	Soil	MVLVTFGSSVLNAKIMLGMLVKVLRGDSIATRRRLPREGDVTFEDLMSATSNFDVRTV
Ga0306920_1000423841	3300032261	Soil	MLVTLGGSVHNAKIMLGMLVKVLHDDSIATRRRLEREGNVTFEDLMRATSNFDVRTVTIEGLTSVRH
Ga0306920_1037014032	3300032261	Soil	VVLVTFGGSVHNAKIMLGMLVKVFRGDSIATRRRLAREGKVTFKDLMRATSNFDVRTVTIEGLTSARHL
Ga0348332_131267213	3300032515	Plant Litter	MLGMLVKVLRGYSIVTRRCLARKGNVTFEDLMRGTSDFDVRTVTIEV
Ga0310914_107968721	3300033289	Soil	VLVTFGGSVHNAKIMLGMLVKVLRADSIATRRRLAREGNVTFEDLMRATPNFDVRTVTIEGLTSVRYLLPVTVGIITVMATM
Ga0318519_101768002	3300033290	Soil	VVLLTFGSSVHNPKIMLGMLVKVLRGDSIATRRRLAREGNVTFKDLMRATSNFDVRTVTFERLTSWRYLLPISVGIIPVM
Ga0318519_106455412	3300033290	Soil	MSFVSSVHNPKIMLGMLVKVLCGDSIATRRCLPRECNVTFEDLMRVASDFDVRTVAIEGLTSVRYLLPIMVGMIT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098816

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences