Metagenome Family F098856

Basic Information
Family ID	F098856
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	139 residues
Representative Sequence	PDRQDRAEAGRLLAYLTAQGPEIFVPCHPFYSVLAGGRGHLHIMGVNDVYSWPRTITSDPARDTAIKDRFRESVTSSFRSRRWKMVILDDCFTPRLFGLNRDYRLVEDLARSGKAPRSLTGYPCAPRYVWVPRGEDVVP
Number of Associated Samples	99
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	1.94 %
% of genes from short scaffolds (< 2000 bps)	1.94 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Most Common Taxonomy
Group	Unclassified (98.058 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (11.650 % of family members)
Environment Ontology (ENVO)	Unclassified (28.155 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (33.981 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.74% β-sheet: 15.57% Coil/Unstructured: 52.69%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00107	ADH_zinc_N	1.94
PF07228	SpoIIE	1.94
PF13407	Peripla_BP_4	1.94
PF05128	DUF697	1.94
PF00710	Asparaginase	1.94
PF05426	Alginate_lyase	0.97
PF04909	Amidohydro_2	0.97
PF03551	PadR	0.97
PF07676	PD40	0.97
PF00015	MCPsignal	0.97
PF13386	DsbD_2	0.97
PF00437	T2SSE	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0252	L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D	Translation, ribosomal structure and biogenesis [J]	3.88
COG0840	Methyl-accepting chemotaxis protein (MCP)	Signal transduction mechanisms [T]	1.94
COG3768	Uncharacterized membrane protein YcjF, UPF0283 family	Function unknown [S]	1.94
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.97
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.97
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.97

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.06 %
All Organisms	root	All Organisms	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.06 %
cellular organisms	root	All Organisms → cellular organisms	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.06 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.06 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.06 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.06 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.94 %

Scaffold	Taxonomy	Length	IMG/M Link
3300033414\|Ga0316619_10361164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1135	Open in IMG/M
3300033521\|Ga0316616_101138565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	986	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.87%
Host-Associated	Host-Associated	28.16%
Engineered	Engineered	0.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.40%
Plants	Host-Associated → Plants	28.16%
Aquatic	Environmental → Aquatic	17.48%
Bioremediation	Engineered → Bioremediation	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.66%
Freshwater	Environmental → Aquatic → Freshwater	14.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.62%
Peat	Environmental → Terrestrial → Peat	7.77%
Marine	Environmental → Aquatic → Marine	2.91%
Floodplain	Environmental → Terrestrial → Floodplain	0.97%
Roots	Host-Associated → Plants → Roots	0.97%
Metal	Engineered → Bioremediation → Metal	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	20.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.68%
Loam	Environmental → Terrestrial → Soil → Loam	7.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.77%
Lake	Environmental → Aquatic → Freshwater → Lake	5.83%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.91%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.94%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.94%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.94%
Coastal	Environmental → Aquatic → Marine → Coastal	0.97%
Sand	Environmental → Terrestrial → Soil → Sand	0.97%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.97%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.97%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	15.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.80%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.85%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.85%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.91%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.94%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.97%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.97%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.97%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	11.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.74%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	6.80%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	5.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.88%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.91%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.91%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.94%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.97%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.97%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.97%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.97%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Sediment	0.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.97%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.97%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.97%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.97%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.97%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.97%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.97%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300004073	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_CordB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009430	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big Spring	Environmental	Open in IMG/M
3300009795	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300025106	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big Spring (SPAdes)	Environmental	Open in IMG/M
3300025799	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026053	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028741	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_4	Environmental	Open in IMG/M
3300028870	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030010	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031727	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5	Host-Associated	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032263	Coastal sediment microbial communities from Maine, United States - Phippsburg sediment 1	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M
3300034419	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B5A4.3	Engineered	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_122022382	3300000550	Soil	IFVPGHPFYSVLAGGRGHLDIVGVSDVYAWPRSITSDPATDAAIKDRFRTSVMSSFQSRRWKMVIGDDCATPRLFGLDTYYQQVEDLARSGRAPRSLTGYPCTPRYVWVPRREGVLP*
Ga0055516_100659811	3300004073	Natural And Restored Wetlands	PSAHVPSQQDRANASRLLAYLREQGPEVFVPSHPYYSVLAGGSGHLHIMGVNDVYSWPRTITSDPGRDTAIKDRFRESLMSSFRSRRWKMVIQDDCSTPRLFGLRRYYRLVEDLARSGKAPRSLTGYPCAPRYVWVPRANDS*
Ga0062593_1028131431	3300004114	Soil	AFGLLGLGILSAHAMIRWLDPSPHVPSRQDRTEAGRLLAYLTNQGPEIFVPCHPFYSVLAGGRGHLHVMGLNDVYFWPRAITSDPARDAAIRDRFRESVMSSFRSNRWKRVIQDDCATSRLFGLEKYYTLVEDLARSGRSPRSLTGYPCAPRYVWEPRGEGEVP*
Ga0062595_1026734781	3300004479	Soil	LGLLSAHAASHWLDPSPHVPSRQDLAAAKGFLAYLGEQGPEIFVPGHPFYSVLAGGRGHLDIVGVSDVYAWPRSITSDPARDAAIKDRFRTSVLSSFQSRRWKMVIADDCATPRLFGLNTYYQQVEDLARTGRAPRPLTGYLCTPRYVWVPRREGVLP*
Ga0062592_1007087362	3300004480	Soil	GLLGLGLLSAHAATHWLDPSPHVPSRHDLAAARSFLAYVRAQGPDILVPGHPFYSVLAGGRGHFDIMGVSDVYAWPRSITSDPAWDAAIKDRFRTSVAGSFKARRWKLVIGDDCATPRLFGLNTYYEQVEDLAGSGRAPRSLTGYPCTPRYVWAPRAGASREDR*
Ga0062591_1017929692	3300004643	Soil	LLGLGLLSARAATRWLDPSAHVPTRQDLAAATSFLAYLGAQGPEILVPGHPFYSVLAGGRGHLDIVGVSDVYAWPRSITSDPARDAAIKDRFRESVAGSFKARRWKLVIGDDCATPRLFGLNTYYEPVEDLARSGRAPRSLTGYPCTLRYVWAPR*
Ga0066676_110230882	3300005186	Soil	PFYNVLAGGRGHLHIMGLNDVFSWPRTITSDPGRDAAIKDRFRESVMTSFRSRRWKRVIQDDCGTPRLFGLDRYYRPVEDLARSGKSPRSLTGYPCAPRSVWVPRGEGVVP*
Ga0070690_1011996931	3300005330	Switchgrass Rhizosphere	AIYFGALLSAVCVVEVAALAAGLGPVSVRMAGVIGLLVLSGHAAIRWLVPSPHVPTLQDRAEARRLLDYLTEEGPGIFVPCHPFYNVLAGGRGHLHVMGISDVYSWPRRITADPARDAAIKDGFRRSVSESFRSRRWTVVLDDAAITRQLFGLEQYYVPVDDLAHTGRVPRVLTGYPCAPRRVFVPR*
Ga0070680_1011199402	3300005336	Corn Rhizosphere	HWLDPSPHVPSRHDLAAARSFLAYVRAQGPDILVPGHPFYSVLAGGRGHFDIMGVSDVYAWPRSITSDPAWDAAIKDRFRTSVASSFKARRWKRVIGDDCATPRLFGLNTYYEQVEDLAGSGRAPRSLTGYPCTPRYVWAPRAGASREDR*
Ga0070687_1014492861	3300005343	Switchgrass Rhizosphere	SPHVPTLQDRAEARRLLDYLTEEGPGIFVPCHPFYNVLAGGRGHLHVMGISDVYSWPRRITADPARDAAIKDGLRRSVSESFRSRRWTVVVDDAAFTRQLFGLEQYYVPVDDLAHTGRVPRVLTGYPCAPRRVFVPR*
Ga0070673_1000397964	3300005364	Switchgrass Rhizosphere	NAYIPAIYFGALLSAVCVVEVAALAAGLGPVSVRMAGVIGLLVLSGHAAIRWLDPSPHVPTLQDRAEARRLLDYLTEEGPGIFVPCHPFYNVLAGGRGHLHVMGISDVYSWPRRITADPARDAAIKDGFRRSVSESFRSRRWTVVVDDAAFTRQLFGLEQYYVPVDDLAHTGRVPRVLTGYPCAPRRVFVPR*
Ga0070701_108033582	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	LQDRAEARRLLDYLTEEGPGIFVPCHPFYNVLAGGRGHLHVMGISDVYSWPRRITADPARDAAIKDGFRRSVSESFRSRRWTVVVDDAAFTRQLFGLEQYYLPVDDLGHAGRVPRVLTGYPCAPRRVFVPR*
Ga0070700_1005551961	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	HFDIMGVSDVYAWPRSITSDPTRDAAIKDRFRTSVASSFKARRWKRVIGDDCATPRLFGLNTYYEQVEDLAGSGRAPRSLTGYPCTPRYVWAPRAGASREDR*
Ga0070696_1003665081	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	EARRLLDYLTEEGPGIFVPCHPFYNVLAGGRGHLHVMGISDVYSWPRRITSDPARDAAIKDGFRRSVSESFRSRRWTVVVDDAAFTRQLFGLEQYYVPVDDLAHTGRVPRVLTGYPCAPSRVFVPR*
Ga0068854_1004030442	3300005578	Corn Rhizosphere	AEARRLLDYLTEEGPGIFVPCHPFYNVLAGGRGHLHVMGISDVYSWPRRITADPARDAAIKDGLRRSVSESFRSRRWTVVVDDAAFTRQLFGLEQYYVPVDDLGHAGRVPRVLTGYPCAPRRVFVPR*
Ga0068866_108587491	3300005718	Miscanthus Rhizosphere	PHVPSREDRAEAGRLLAYLTNGGPEVFVPCHPFYSVLAGGRGHLHVMGLNDVYFWPRAITADPAWDAAIKERFRASVVSSFESRRWTRVILDDCATSRLFGLEKYYTLVEDLARSGRSPRSLTGYPCAPRYVWEPRGEGS*
Ga0068863_1017454521	3300005841	Switchgrass Rhizosphere	AIYFGALLSAACVVEVAALAAGLGPVSVRMAGVIGLLVLSGHAAIRWLDPSPHVPTLQDRAEARRLLDYLTEEGPGIFVPCHPFYNVLAGGRGHLHVMGISDVYSWPRRITADPARDAAIKDGFRRSVSESFRSRRWTVVLDDAAFTRQLFGLEQYYVPVDDLAHTGRVPRVLTGYPCAPRRVFVPR*
Ga0068860_1022179282	3300005843	Switchgrass Rhizosphere	LQDRAEARRLLDYLTEEGPGIFVPCHPFYNVLAGGRGHLHVMGISDVYSWPRRITADPARDAAIKDGFRRSVSESFRSRRWTVVVDDAAFTRQLFGLEQYYVPVDDLAHTGRVPRVLTGYPCAPRRVFVPR*
Ga0075364_111616512	3300006051	Populus Endosphere	HLHIMGVNDVYSWPRAITSDAARDAAIKERFRESMARSFSTRRWSIVLQDDCFTSRLFGLETYYRLAEDLAESGKAPRTLTGNPCVPRYVWVPREEGAAP*
Ga0075428_1018204941	3300006844	Populus Rhizosphere	PFYSVLAGGRGHLDIVGVSDVYAWPRSITSDPARDTAIKDRFRTSVMSSFQSRRWKMVIGDDCATPRLFGLNTYYQQVEDLARSGRAPRSLTGYPCTPRYVWVPRREGVLP*
Ga0075428_1023610851	3300006844	Populus Rhizosphere	HPFYSVLAGGRGHLDIVGVSDVYAWPRSITSDPARDAAIKERFRTSVMSSFQSRRWKLVIGDDCATPRLFGLNTYYEQVEDLARSGRAPRSLTGYPCTPRYVWVPRRDGVLP*
Ga0075420_1001096973	3300006853	Populus Rhizosphere	SFLSYLGEQGPEIFVPGHPFYSVLAGGRGHLDIVGVSDVYAWPRSITSDPARDTAIKDRFRTSVMSSFQSRRWKMVIGDDCATPRLFGLNTYYQQVEDLARSGRAPRSLTGYLCTPRYVWVPRRQGVPP*
Ga0075429_1007363602	3300006880	Populus Rhizosphere	YLTEQGPEIFVPSHPFYSVLAGGRGHLHVMGINDVYSWPRTITSDPVRDAAIKDRFRSSVMSSFKSKRWKLVIQDDCATPRLFGLNSSYRLAEDLAPGGMAPRSLTGYPCAPRHVWVPREEGVVP*
Ga0105095_108186021	3300009053	Freshwater Sediment	HVPTRQDRAEARRLLAYLTEQGPEIFVPCHPFYSVLAGGRGHLHIMGINDVYSWPRSITPDPGRDTAIKDRFRRSVMSSFRSKRWKMVVHDDCPTPRLFGLNTYYRLVEDLARSGKAPRSLTGYPCAPRYVWVPRGEGADGPSDGKAVVSPVLPSSRNEVLAQIRPPTRGAAA
Ga0075418_100534431	3300009100	Populus Rhizosphere	IFVPAHPFYSVLAGGRGHLDIVGVSDVYAWPRSITSDPARDAAIKERFRTSVMSSFQSRRWKLVIGDDCATPRLFGLNTYYEQVEDLARSGRAPRSLTGYPCTPRYVWVPRRDGVLP*
Ga0115026_111491012	3300009111	Wetland	GLLSAHTVIRWLDPSPHVPSSQDRAEARRFLDYLTEQGPATFVPGHPFYNVLAGGAGHLHVMGVNDVYSWPRTITSDPGRDAAIKDRFRRSVMGSFRSRRWKMVIQDDCATPRLFGLNTYYRLVGDLARSGEAPRSLTGYPCAPRYVWVPRGEGEVP*
Ga0114129_100433031	3300009147	Populus Rhizosphere	FYSVLAGGRGHLHVMGINDVYSWPRTITSDPVRDAAIKDRFRSSVMSSFKSKRWKLVIQDDCATPRLFGLNSSYRLAEDLAPGGMAPRSLTGYPCAPRHVWVPREEGVVP*
Ga0113563_138790891	3300009167	Freshwater Wetlands	LLGLGLLAAHATIRWLDPSPHVPTQLDHAKARRLLAYLTEQGPEIFVPCHPYYSVLAGGRGHLHVMGVNDVYSWPRAITSDPGRDTAIRDRFRRSVMSSFRSKRWKMVIHDDCPTPRLSGLNTYYRLVEDLARSGKAPRSLTGYLCAPRYVWVPRGDGVVP*
Ga0105248_109890441	3300009177	Switchgrass Rhizosphere	GAYDNAYIPAIYFGALLSAVCVVEVAALAAGLGPVSVRMAGVIGLLVLSGHAAIRWLDPSPHVPTLQDRAEARRLLDYLTEEGPGIFVPCHPFYNVLAGGRGHLHVMGISDVYSWPRRITADPARDAAIKDGFRRSVSESFRSRRWTVVVDDAAFTRQLFGLEQYYVPVDDLGHAGRVPRVLTGYPCAPRRVFVPR*
Ga0114938_11239211	3300009430	Groundwater	VGIRWLDPSPHVPSRQDRAVAGRFLDWLGEQGPDIFVPAHPFYNVLAGGRGHLHVMGVSDAWAWARTITSDPGRDRAIKDRFRESIAGSLASGRWTLVLQDDCPTPRLFGLQTHYRLVEDLASSGRAPRTLTGYPCTLRSVWAPRLTPGPRPGPP*
Ga0105059_10225102	3300009795	Groundwater Sand	GLGLLSAHAASHWLDPSPHVPSRQDLAAARSFLSYLAEQGPEIFVPGHPFYSVLAGGRGHLDIVGVSDVYAWPRSITSDPATDAAIKDRFRASVMSSFQSRRWKLVIGDDCATPRLFGLNTYYQQVEDLARSGRAPRSLTGYPCTPRYVWVPRREGVLP*
Ga0126372_122088602	3300010360	Tropical Forest Soil	LTEQGSGVFVPCHPFYNVLAGGSGHLHMMGVNDVYAWPHAITADPRRDTEIRDHFRASLEQSFEARRWKLVIQDDCGTPALAGLKSNYRMVEDLALSGRSPHPLTGYPCSPRYVWIPRG*
Ga0134122_114411641	3300010400	Terrestrial Soil	YNVLAGGRGHLHIMGGSDVYSWPHRITSDRGTDAAIKERFRLSVPHSFRSKRWKMVIDDAALRHQLFGLTSYYRLVDDLASSGRTPRSLTGYTCAPGDVWVPR*
Ga0134121_102198633	3300010401	Terrestrial Soil	MRVFSLLGLTVLSAHALIHRLDPSPHIPTALDQAEAKRLLAYLTEQGPDTFVPAHPFYNVLAGGAGHMHAMGLNDVYAWPRAITGDPNRDAAIKERFRESVMTSFQAHRWKRVILDDCATPPLFGLSRYYGVALDLGQSGKAPRAFTGYPCTPRYVWAPRGELP*
Ga0157299_102411031	3300012899	Soil	PTLQDRAEARRLLDYLTEEGPGIFVPCHPFYNVLAGGRGHLHVMGISDVYSWPRRITADPARDAAIKDGFRRSVSESFRSRRWTVVVDDAAFTRQLFGLEQYYVPVDDLGHAGRVPRVLTGYPCAPRRVFVPR*
Ga0157288_101938052	3300012901	Soil	VRMAGVIGLLVLSGHAAIRWLDPSPHVPTLQDRAEARRLLDYLTEEGPGIFVPCHPFYNVLAGGRGHLHVMGISDVYSWPRRITADPARDAAIKDGFRRSVSESFRSRRWTVVLDDAAFTRQLFGLEQYYVPVDDLAHTGRVPRVLTGYPCAPRRVFVPR*
Ga0157283_104035431	3300012907	Soil	PTLQDRAEARRLLDYLTEEGPGIFVPCHPFYNVLAGGRGHLHVMGISDVYSWPRRITADPARDAAIKDGFRRSVSESFRSRRWTVVLDDAAFTRQLFGLEQYYVPVDDLAHTGRVPRVLTGYPCAPRRVFVPR*
Ga0153916_101176301	3300012964	Freshwater Wetlands	RIFSLLGLGLLTAHATIRWLDPSPHVPNQQDHAKARRLLAYLTEQGPEILVPCHPFYSVLAGGRGHLHVMGVNDVYSWPRSITSDPGRDTAIKDRFRESVTSSFRSKRWKMVIQDDCPTPRLFGLNTYYRLAEDLAPSGKAPRSLTGYPCTPRYAWVPRGGVVAP*
Ga0132258_111942121	3300015371	Arabidopsis Rhizosphere	QGAYDNAYIPAIYFGALLSAACVVEVAALAAGLGSVSVRVAGVIGLLVLSGHAAIRWLDPSPHVPTPQDRAEARRLLDYLTEEGPGTFVPCHPFYNVLAGGRGHLHVMGISDVYSWPRRITSDPARDAAIKDGFRRSVSESFRSRRWTVVVDDAAFTHQLFGLEQYYVPVDDLAHTGRAPRVLTGYPFAPSRVFVPR*
Ga0132256_1012507192	3300015372	Arabidopsis Rhizosphere	SPHVPSRQDLAVARSFLAYLAEQGPEIFVPGHPFYSVLAGGRGHLDIVGVSDVYAWPRSITSDPARDTAIKDRFRTSVSSSFESRRWKMVIADDCATPRLFGLNTYYQQVEDLARSGRAPRSLTGYLCSPRYVWVPRREGVLP*
Ga0132255_1023462011	3300015374	Arabidopsis Rhizosphere	LLGLGLLSAHAASHWLDPSPHVPSRQDLAVARSFLAYLAEQGPEIFVPGHPFYSVLAGGRGHLDIVGVSDVYAWPRSITSDPARDTAIKDRFRTSVSSSFESRRWKMVIADDCATPRLFGLNTYYQQVEDLARSGRAPRSLTGYLCSPRYVWVPRREGVLP*
Ga0187779_112672341	3300017959	Tropical Peatland	GLVLLSAHAAIRWLDPSPLVPSERDRVEAKRLLAYLVEQGPEILVPCHPFYSVLAGGRGHLHIMGVNDVYSWPRAITSDPDRDAAIKERFRGSVASSFSSRRWKVVIQDDCGTPRLFGLDRYYRLVDDLARSGRAPRTLTGYPCAPRYVWVPRGDGAAP
Ga0187788_100764031	3300018032	Tropical Peatland	IFALLGLGLLSAHAMIRWLDPSPHVPSPQDRAEARRLLDYLAQQGPEVFVPCHPYYSVLAGGRGHLHIMGVNDVYSWPRRITSDPGRDAVIKDRFRESVTGSFRSRRWKAVIQDDCGTPRLFGLNTYYRPVEDLARSGRAPRSLTGYPCTPRYVWVPRGDAGVP
Ga0187774_107572412	3300018089	Tropical Peatland	CHPFYSVLAGGAGHLHAMGLNDVYTWPRSITSDPARDAVIKERFRESVRRSFESRRWKAVILDDCATPRLFGLESHYGLVEDLARSGRSPRSLTGYPCTPRYVWVPRG
Ga0247796_11214601	3300023261	Soil	TNQGPEIFVPCHPFYSVLAGGRGHLHVMGLNDVYFWPRAITSDPARDAAIRDRFRESVMSSFRSNRWKRVIQDDCATSRLFGLEKYYTLVEDLARSGRSPRSLTGYPCAPRYVWEPRGEGEVP
Ga0209398_10699632	3300025106	Groundwater	VGIRWLDPSPHVPSRQDRAVAGRFLDWLGEQGPDIFVPAHPFYNVLAGGRGHLHVMGVSDAWAWARTITSDPGRDRAIKDRFRESIAGSLASGRWTLVLQDDCPTPRLFGLQTHYRLVEDLASSGRAPRTLTGYPCTLRSVWAPRLTPGPRPGPP
Ga0210122_11426541	3300025799	Natural And Restored Wetlands	LDPSPHVPNRQDHAEARRLLAYLTEQGPEILVPCHPFYSVLAGGRGHLHIMGLNDVYFWPRTITSDPARDAAIKDRFRRSVRSSFRSRRWKMVIRDDCATPRLFGLNRNYRLVEDLAQSGKAPRSLTGYLCAPRYVWVPRGEGAVP
Ga0207660_109747202	3300025917	Corn Rhizosphere	HAATHWLDPSPHVPSRHDLAAARSFLAYVRAQGPDILVPGHPFYSVLAGGRGHFDIMGVSDVYAWPRSITSDPARDAAIKDRFRTSVASSFKARRWKRVIGDDCATPRLFGLNTYYEQVEDLAGSGRAPRSLTGYPCTPRYVWAPRAGASREDR
Ga0207711_108005001	3300025941	Switchgrass Rhizosphere	LLSAACVVEVAALAAGLGPVSVRMAGVIGLLVLSGHAAIRWLDPSPHVPTLQDRAEARRLLDYLTEEGPGIFVPCHPFYNVLAGGRGHLHVMGISDVYSWPRRITADPARDAAIKDGFRRSVSESFRSRRWTVVVDDAAFTRQLFGLEQYYVPVGDLAHTGRVPRVLTGYPCAPRRVFVP
Ga0207689_115477282	3300025942	Miscanthus Rhizosphere	DPSRHVPSRQDRAEAGRLLAYLTNQGPEVFVPCHPFYSVLAGGRGHLHVMGLNDVYFWPRAITSDPARDAAIRDRFRESVMSSFRSNRWKRVIQDDCATSRLFGLEKYYTLVEDLARSGRSPRSLTGYPCAPRYVWEPRGEGP
Ga0207651_100590453	3300025960	Switchgrass Rhizosphere	CVVEVAALAAGLGPVSVRMAGVIGLLVLSGHAAIRWLDPSPHVPTLQDRAEARRLLDYLTEEGPGIFVPCHPFYNVLAGGRGHLHVMGISDVYSWPRRITADPARDAAIKDGFRRSVSESFRSRRWTVVLDDAAFTRQLFGLEQYYVPVDDLGHAGRVPRVLTGYPCAPRRVFVPR
Ga0207640_103648882	3300025981	Corn Rhizosphere	PSPHVPTLQDRAEARRLLDYLTEEGPGIFVPCHPFYNVLAGGRGHLHVMGISDVYSWPRRITADPARDAAIKDGLRRSVSESFRSRRWTVVVDDAAFTRQLFGLEQYYVPVDDLGHAGRVPRVLTGYPCAPRRVFVPR
Ga0207703_123812621	3300026035	Switchgrass Rhizosphere	PCHPFYSVLAGGRGHLHVMGLNDVYFWPRAITSDPARDAAIKDRFRTSVAGSFKARRWKLVIGDDCATPRLFGLNTYYEQVEDLAGSGRAPRSLTGYPCTTRYVWAPRAGGALP
Ga0208422_10451481	3300026053	Natural And Restored Wetlands	LAGGSGHLHIMGVNDVYSWPRTITSDPGRDTAIRDRFRRSLTGSFTSRRWTMVIQDDCFTPRLVGLNRHYRLVEDLARSGKAPRPLTGYPCGPRYVWVPRGEER
Ga0207676_100618621	3300026095	Switchgrass Rhizosphere	SGHAAIRWLDPSPHVPTLQDRAEARRLLDYLTEEGPGIFVPCHPFYNVLAGGRGHLHVMGISDVYSWPRRITADPARDAAIKDGFRRSVSESFRSRRWTVVLDDAAFTRQLFGLEQYYVPVDDLAHTGRVPRVLTGYPCAPRRVFVPR
Ga0207674_113491922	3300026116	Corn Rhizosphere	VSVRMAGVIGLLVLSGHAAIRWLDPSPHVPTLQDRAEARRLLDYLTEEGPGIFVPCHPFYNVLAGGRGHLHVMGISDVYSWPRRITADPARDAAIKDGFRRSVSESFRSRRWTVVVDDAAFTRQLFGLEQYYLPVDDLGHAGRVPRVLTGYPCAPRRVFVPR
Ga0207675_1002094212	3300026118	Switchgrass Rhizosphere	GSLRTFSVLGLTVLSGHVVIHWLDASPHIPTAQEQAAAKKLLGYLTEQGPDTFVPCHPFYNVLAGGPGHMHVMGLNDVYAWPRAITSDPARDAAIKDGLRRSVSESFRSRRWTVVVDDAAFTRQLFGLEQYYLPVDDLGHAGRVPRVLTGYPCAPRRVFVPR
Ga0209056_104191921	3300026538	Soil	SLLAYLTEQGPDIFVPCHPFYNVLAGGRGHLHIMGLNDVFSWPRTITSDPGRDAAIKDRFRESVMTSFRSRRWKRVIQDDCGTPRLFGLDRYYRPVEDLARSGKSPRSLTGYPCAPRSVWVPRGEGVVP
Ga0209481_103599802	3300027880	Populus Rhizosphere	MNVLVFMIPIALTLGLLGLGLLAGHTAIRWLDPSPHVPTPQDRAEARRLLDYLTEQGPGTFVPCHPFYNVLAGGKGHLHVMGISDVYSWPRRITPDPARDAAIKDRFRRSVEDSFRSRRWTRVIDDPAFTDQLFGLEQYYVRVDDLARDARAPRVLTGYPCAARRVWVPR
Ga0209254_100095281	3300027897	Freshwater Lake Sediment	EILVPSHPFYNVLAGGRGHLHVMGVNDVYLWPRTITSDPARDTAIKDRFRGSVMSSFRSRRWKMVIQDDCPTPRLFGLNTYYRLVEDLAQSGKAPRSLTGYPCAPRYVWVPREEGVATATDPGT
Ga0209668_111312941	3300027899	Freshwater Lake Sediment	PGHLHIMGVNDVYSWPRTITSDPARDTAIKDRFRESVTSSFRSRRWKMVILDDCFTPRLFGLNRDYRLVEDLARSGKAPRSLTGYPCAPRYVWVPRGEGVVP
Ga0209048_110849041	3300027902	Freshwater Lake Sediment	EQGPEILVPCHPYYSVLAGGRGHLHVMGVNDVYSWPRTITSDPGRDAAIKGRFRESVLSSFRSRRWKMVIQDDCFTPRLFGLNKYYRLVEDLARSGKAPRSLTGYPCAPRHVWVPRGEGVVP
Ga0207428_101454161	3300027907	Populus Rhizosphere	GHPFYSVLAGGRGHFDIMGVSDVYAWPRSITSDPTRDAAIKDRFRTSVAGSFKARRWKLVIGDDCATPRLFGLNTYYEQVEDLAGSGRAPRSLTGYPCTPRYVWAPRAGGALP
Ga0209382_109720962	3300027909	Populus Rhizosphere	EARRLLDYLTEQGPGTFVPCHPFYNVLAGGKGHLHVMGISDVYSWPRRITPDPARDAAIKDRFRRSVEDSFRSRRWTRVIDDPAFTDQLFGLEQYYVRVDDLARDARAPRVLTGYPCAARRVWVPR
Ga0268264_120915191	3300028381	Switchgrass Rhizosphere	LQDRAEARRLLDYLTEEGPGIFVPCHPFYNVLAGGRGHLHVMGISDVYSWPRRITADPARDAAIKDGFRRSVSESFRSRRWTVVLDDAAFTRQLFGLEQYYVPVDDLAHTGRVPRVLTGYPCAPRRVFVPR
Ga0302256_100680672	3300028741	Fen	EWLGSLRLFSLLGLGLLSAHSMIRWLDPSAHVPNQQDRAEARRLLAFLSEQGPEVFVPCHPFYNVLAGGRGHLHVMGMNDVYLWPRTITADPGKDTAIKDRFRESVTSSFRSRRWKMVIQDDCATPRLFGLNTYYRRVEDLALVGRSPRSLTGYPCAPRSVWLPSGESVAP
Ga0302254_102424992	3300028870	Fen	LGLLSAHSMIRWLDPSAHVPNQQDRAEARRLLAFLSEQGPEVFVPCHPFYNVLAGGRGHLHVMGMNDVYLWPRTITADPGKDTAIKDRFRESVTSSFRSRRWKMVIQDDCATPRLFGLNTYYRRVEDLALVGRSPRSLTGYPCAPRSVWLPRGESVAP
Ga0311334_107829971	3300029987	Fen	AHAMIRWLDPSPHVPSQQDHAKARRLLAYLAEQGPEIFVPCHPFYNVLAGGSGHLHVMGINDVYSWPRTITSDPGRDTVIKDRFRESVTSSFRSKRWKMVILDDCFTPRLFGLNRYYRLVEDLARSGKAPRSLTGYPCAPRYVSLPRGAGVAP
Ga0302299_100990212	3300030010	Fen	SAHSMIRWLDPSAHVPNQQDRAEARRLLAFLSEQGPEVFVPCHPFYNVLAGGRGHLHVMGMNDVYLWPRTITADPGKDTAIKDRFRESVTSSFRSRRWKMVIQDDCATPRLFGLNTYYRRVEDLALVGRSPRSLTGYPCAPRSVWLPRGESVAP
Ga0311366_112405061	3300030943	Fen	HLHVMGMNDVYLWPRTITADPGRDTAIKDRFRESVMSSFRSRRWKMVIQDDCATPRLFGLNTYYRRVEDLALVGRSPRSLTGYPCAPRSVWLPRGESVAP
Ga0302323_1004000842	3300031232	Fen	AEQGPEIFVPCHPFYNVLAGGSGHLHVMGINDVYSWPRTITSDPGRDTVIKDRFRESVTSSFRSKRWKMVILDDCFTPRLFGLNRYYRLVEDLARSGKAPRSLTGYPCAPRYVSLPRGAGVAP
Ga0318560_107961941	3300031682	Soil	MVPCHPFYSVLAGGAGHLHVMGVNDVYAWPRTITSDPARDAAIKDRFRESVRQSFESRRWSLVVLDDCATPRLFGLESHYRLALDLAQTRSAPRSFTGYPCTPRYVWLPQE
Ga0302321_1004618791	3300031726	Fen	GLGLLSAHSMIRWLDPSAHVPNQQDRAEARRLLAFLSEQGPEVFVPCHPFYNVLAGGRGHLHVMGMNDVYLWPRTITADPGKDTAIKDRFRESVTSSFRSRRWKMVIQDDCATPRLFGLNTYYRRVEDLALVGRSPRSLTGYPCAPRSVWLPRGESVAP
Ga0316576_107743531	3300031727	Rhizosphere	GLGLLSAHAAIRWLDPSPHVPNREDHAEARRLLAYLTEQGPGIFVPCHPYYSVLAGGEGHLHIMGLNDVYFWPRTITSDPTRDRAIKDRLRESVRSSFKSRRWEMVILDDCPTPRLFGLDRNYRLVEDLARSGKSPRTLTGYACAPRHVWVPR
Ga0318492_105386672	3300031748	Soil	LHVMGVNDVYAWPRTITSDPARDAAIKDRFRESVRQSFESRRWSLVVLDDCATPRLFGLESHYRLALDLAQTRSAPRSFTGYPCTPRYVWLPQE
Ga0318565_105828062	3300031799	Soil	VERMARHLHVMGVNDVYAWPRTITSDPARDAAIKDRFRESVRQSFESRRWSLVVLDDCATPRLFGLESRYRLALDLAQTRSAPRSFTGYPCTPRYVWLPQE
Ga0315290_113848952	3300031834	Sediment	RSLLAYLTEQGPEIFVPCHPFYSVLAGGPGHLHIMGVNDVYSWPRTITSDPARDTAIKDRFRESLTSSFRSRRWKMVILDDCFTPRLFGLNRDYRLVEDLARSGKAPRSLTGYPCAPRYVWVPRGEDVVP
Ga0310907_102053242	3300031847	Soil	VLAGGRGHLDIVGVSDVYAWPRSITSDPARDTAIKDRFRTSVLSSFQSRRWKLVIGDDCATPHLFGLNTYYEQVEDLARSGRAPRSLTGYPCSPRYVWVPRREGVLP
Ga0310904_105817671	3300031854	Soil	VAKGFLAYLGEQGPEIFVPGHPFYSVLAGGRGHLDIVGVSDVYAWPRSITSDPARDTAIKDRFRTSVLSSFQSRRWKLVIGDDCATPHLFGLNTYYEQVEDLARSGRAPRSLTGYPCSPRYVWVPRREGVLP
Ga0310884_106794931	3300031944	Soil	RHDLAAARSFLAYVRAQGPDILVPGHPFYSVLAGGRGHFDIMGVSDVYAWPRSITSDPAWDAAIKDRFRTSVASSFKARRWKRVIGDDCATPRLFGLNTYYEQVEDLAESGRAPRSLTGYPCTPRYVWAPRAGASREDR
Ga0310890_102774541	3300032075	Soil	YSVLAGGRGHFDIMGVSDVYAWPRSITSDPAWDAAIKDRFRTSVAGSFKARRWKLVIGDDCATPRLFGLNTYYEQVEDLAGSGRAPRSLTGYPCTPRYVWAPRAGGALP
Ga0310895_103032232	3300032122	Soil	PSRHDLAAARSFLAYVRAQGPDILVPGHPFYSVLAGGRGHFDIMGVSDVYAWPRSISSDPAWDAAIKDRFRTSVAGSFKARRWKLVIGDDCATPRLFGLNTYYEQVEDLAGSGRAPRSLTGYPCTPRYVWAPRAGASREDR
Ga0315292_116963131	3300032143	Sediment	VLAGGRGHLHVMGVNDVYSWPRTITSDPVRDTAIKDRFCESVTSSFRSRRWKMVIQDDCSTPRLFGLNRYYRLVEDLARSGKAPRSLTGYPCAPRYVWVPRGEGAVP
Ga0316195_103520242	3300032263	Sediment	YSVLAGGRGHLHIMGLNDVYFWPRTITSDPARDTAIKDGLRRSVRDSFRARRWKMVIRDDCPTPRLFGLNRNYRLVADLGERGKAPRTLTGYRCAPRHVWVPRGEGVAP
Ga0315286_107988982	3300032342	Sediment	SVLAGGPGHLHIMGVNDVYSWPRTITSDPARDTAIKDRFRESVTSSFRSRRWKMVILDDCFTPRLFGLNRDYRLVEDLARSGKAPRSLTGYPCAPRYVWVPRGEGVVP
Ga0315287_118133221	3300032397	Sediment	PTQQDHAEARRLLAYLTEQGPEILVPSHPFYSVLAGGSGHLHVMGVNDVYLWPRTITSDPGRDTAIRDRFRGSVMSSFRSRRWKMVIQDDCPTPRLFGLNTYYRLVEDLAQSGKAPRSLTGYPCAPRYVWLPREEGR
Ga0315275_112952361	3300032401	Sediment	AHAMTRWLEPSPHVPTQQDHAEARRFLAYLIEQGPEIFVPSHPFYSVLAGGSGHLHVMGVNDVYLWPRTITSDPGRDTAIKDRFRGRVMSSFRSRRWKMVIQDDCPTPRLFGLNTYYRLVEDLAQRGKSPRSLTGYPCAPRYVWVPRAEGG
Ga0315273_121146621	3300032516	Sediment	PDRQDRAEAGRLLAYLTAQGPEIFVPCHPFYSVLAGGRGHLHIMGVNDVYSWPRTITSDPARDTAIKDRFRESVTSSFRSRRWKMVILDDCFTPRLFGLNRDYRLVEDLARSGKAPRSLTGYPCAPRYVWVPRGEDVVP
Ga0335069_125222601	3300032893	Soil	PHVPNQQDYAEARRLLAYLTEQGPEAFVPCHPFYSVLAGGRGHLHVMGVNDVYTWPRTITSDPGRDTAIKDRFRESVMSSFRSKRWKMVILDDCFTPRLPGLNRYYRLVEDLGRSGRAPRSLTGYPCAPRYVWVPRGEGV
Ga0316605_113241102	3300033408	Soil	VPCHPFYSVLAGGRGHLHIMGISDVYSWPRTITSDPGRDIAIKDRFRRSVMSSFRSRRWKMVIQDDCATPRLFGLNTYYRLVEDLARSGKAPRSLAGYPCAPRYVWLPRGEGVVP
Ga0316619_103611642	3300033414	Soil	GLGLLSAHAMIRWVDPSPHVPNQQDQAEARRLLVYLTEQGPEIFVPCHPFYSVLAGGRGHLHIMGVNDVYSWPRTITSDPGRDTAIKDRFRRSVMSSFRSKRWKMVIHDDCPTPRLSGLNTYYRLVEDLARSGKAPRSLTGYLCAPRYVWVPRGEGVVP
Ga0316619_104406222	3300033414	Soil	VIRWLDPSPHVPSSQDRAEARRFLDYLTEQGPATFVPGHPFYNVLAGGAGHLHVMGVNDVYSWPRTITSDPGRDAAIKDRFRRSVMGSFRSRRWKMVIQDDCATPRLFGLNTYYRLVGDLARSGEAPRSLTGYPCAPRYVWVPRGEGEVP
Ga0316622_1002099691	3300033416	Soil	RQDRAEARRLLAYLTEQGPEIFVPCHPFYSVLAGGRGHLHVMGVNDVYSWPRAITSDPVRDAAIKDRFRRSVASSFRSRRWRMVIQDDCPTPRLFGLNRNYRLVEDLARGGRAPRPLTGFGCTPRYVWVPR
Ga0316622_1019781191	3300033416	Soil	GSLRVFGLVGLGLLSAHAMFRWLDPSPHVPSQQDHAEARRLLAYLSEQGPEIFVPCHPFYSVLAGGEGHLHIMGVNDVYSWPRTITSDPGRDTGIKDRFRRSVMSSFRSKRWKMVILDDCFTPRLFGLNTYYRLAEDLAGSGRAPRVLTGYPCAPRHVWVPRGEGVIP
Ga0316622_1019989891	3300033416	Soil	LLSAHAATRWLDPSSLVPTRQDRAEASRLLDYLTEQGPEILVPCHPFYNVLAGGSGHLHMMGVNDVYAWPRGITSDSARDAAIKERFRESVAGSLRSRRWKMVIQDECPLPRLVGLDRNYRLVEDLARSGRAPRPLTGYGCTPRYVWVPREEAAAP
Ga0326726_105214612	3300033433	Peat Soil	WPRTITSDPGRDTAIKDRFRRSVMGSFRSKRWKMVIQDDCFTPRLFGLNTYYRLVEDLARSGKAPRSLTGYPCAPRYVWVPRGEGVAASDGAAGSRPGLELVKE
Ga0316600_105765662	3300033481	Soil	WPGSLRIFSLLGLGLLSAHTVIRWLDPSPHVPSSQDRAEARRFLDYLTEQGPATFVPGHPFYNVLAGGAGHLHVMGVNDVYSWPRTITSDPGRDAAIKDRFRRSVMGSFRSRRWKMVIQDDCATPRLFGLNTYYRLVGDLARSGEAPRSLTGYPCAPRYVWVPRGEGEVP
Ga0316624_117362652	3300033486	Soil	IFVPCHPFYSVLAGGRGHLHIMGVNDVYSWPRTITSDPARDTAIKERFRESVMSSFRSKRWKIVIQDDCFTPRLFGLNSYYRLVEDLARSGKAPRSLTGYPCAPRYVWVPRGEGVVPSSVEDRAR
Ga0316630_106128872	3300033487	Soil	SSQDRAEARRFLDYLTEQGPATFVPGHPFYNVLAGGAGHLHVMGVNDVYSWPRTITSDPGRDAAIKDRFRRSVMGSFRSRRWKMVIQDDCATPRLFGLNTYYRLVGDLARSGEAPRSLTGYPCAPRYVWVPRGEGEVP
Ga0316628_1025584062	3300033513	Soil	FVPCHPFYSVLAGGRGHLHIMGVNDVYSWPRAITSDPGRDTAIKDRFRRSVMSSFRSKRWKMVIQDDCPTPRLFGLSTYYRLVEDLAPSGKAPRSLTGYPCTPRYAWVPRGGVVAP
Ga0316616_1011385651	3300033521	Soil	NQQDQAEARRLLVYLTEQGPEIFVPCHPFYSVLAGGRGHLHIMGVNDVYSWPRTITSDPGRDTAIKDRFRRSVMSSFRSKRWKMVIHDDCPTPRLSGLNTYYRLVEDLARSGKAPRSLTGYLCAPRYVWVPRGEGVVP
Ga0364941_078869_356_772	3300034417	Sediment	NQQDRAEARRLLAYLTEQGPEIFVPCHPFYSVLAGGNGHFHVMGLNDVYSWPRTITSDAGRDTVIRDRFRESLTSSFKSRRWKMVIQDDCFTPRLFGLNRYYRLVEDLARSGKAPRSLTGYPCAPRHVWVPRGEGVLP
Ga0373914_0109160_278_688	3300034419	Sediment Slurry	QDHAKARRLLAYLTEQGPEIFVPCHPYYSVLAGGGGHLHVMGVNDVYSWPRAITSDPGRDTAIKDRFRRSVMSSFRSRRWKMVIQDDCFTARLFGLNTYYRRVEDLARSGRAPRSLTGYPCAPRYVWVPRGKGAVP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098856

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign