Metagenome / Metatranscriptome Family F099244

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099244
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	109 residues
Representative Sequence	VTRTRVWLVVSPVVAAGVLVAHSLAYRLTGTPTDAFHAYLGHAPQVLLLLTIAGIVVGALGAPRQAPPAHVFPFVALGTFVVQEHVERLVHGGGVPLLLTSPAF
Number of Associated Samples	93
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	44.55 %
% of genes near scaffold ends (potentially truncated)	98.06 %
% of genes from short scaffolds (< 2000 bps)	95.15 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.350 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (33.010 % of family members)
Environment Ontology (ENVO)	Unclassified (45.631 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.427 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.55% β-sheet: 0.00% Coil/Unstructured: 45.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF13181	TPR_8	5.83
PF13432	TPR_16	3.88
PF13414	TPR_11	1.94
PF07719	TPR_2	1.94
PF02934	GatB_N	0.97
PF02637	GatB_Yqey	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0064	Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit	Translation, ribosomal structure and biogenesis [J]	1.94
COG2511	Archaeal Glu-tRNAGln amidotransferase subunit E, contains GAD domain	Translation, ribosomal structure and biogenesis [J]	1.94
COG1610	Uncharacterized conserved protein YqeY, may have tRNA amino acid amidase activity	General function prediction only [R]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.35 %
Unclassified	root	N/A	11.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.35 %
Unclassified	root	N/A	11.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.35 %
Unclassified	root	N/A	11.65 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	85.44 %
Unclassified	root	N/A	11.65 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	85.44 %
Unclassified	root	N/A	11.65 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	84.47 %
Unclassified	root	N/A	11.65 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	83.50 %
Unclassified	root	N/A	11.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.97 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	83.50 %
Unclassified	root	N/A	11.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_280_length_1299_cov_7.117013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1331	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2313208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1332	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_14403497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	856	Open in IMG/M
3300001213\|JGIcombinedJ13530_108715448	Not Available	583	Open in IMG/M
3300002077\|JGI24744J21845_10094136	Not Available	551	Open in IMG/M
3300004156\|Ga0062589_102526904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300004157\|Ga0062590_100667987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	929	Open in IMG/M
3300004479\|Ga0062595_101045496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300005332\|Ga0066388_102593041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	923	Open in IMG/M
3300005345\|Ga0070692_10457030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	818	Open in IMG/M
3300005345\|Ga0070692_10616482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	720	Open in IMG/M
3300005354\|Ga0070675_100169360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1883	Open in IMG/M
3300005355\|Ga0070671_101250778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300005455\|Ga0070663_101686441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300005456\|Ga0070678_102273039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300005457\|Ga0070662_101378969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300005466\|Ga0070685_11197418	Not Available	577	Open in IMG/M
3300005544\|Ga0070686_101296902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300005578\|Ga0068854_101950095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300005615\|Ga0070702_101351972	Not Available	580	Open in IMG/M
3300005713\|Ga0066905_101623002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300005713\|Ga0066905_101718277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300006580\|Ga0074049_13109925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1490	Open in IMG/M
3300006605\|Ga0074057_11061542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300006845\|Ga0075421_102752748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300006903\|Ga0075426_11346856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300009094\|Ga0111539_12202057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300009100\|Ga0075418_10749700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1054	Open in IMG/M
3300009147\|Ga0114129_13158661	Not Available	537	Open in IMG/M
3300009148\|Ga0105243_12607199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300009162\|Ga0075423_12068193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300009176\|Ga0105242_12323332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300010047\|Ga0126382_12124421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300010400\|Ga0134122_12187209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300010403\|Ga0134123_12112673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300012893\|Ga0157284_10085498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	796	Open in IMG/M
3300012901\|Ga0157288_10397413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300012905\|Ga0157296_10310178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300012907\|Ga0157283_10007511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1723	Open in IMG/M
3300012911\|Ga0157301_10451453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300012912\|Ga0157306_10422609	Not Available	527	Open in IMG/M
3300012913\|Ga0157298_10047294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	975	Open in IMG/M
3300012914\|Ga0157297_10519479	Not Available	505	Open in IMG/M
3300012916\|Ga0157310_10583480	Not Available	502	Open in IMG/M
3300012961\|Ga0164302_10507606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	852	Open in IMG/M
3300012961\|Ga0164302_11370200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300015077\|Ga0173483_10277870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	810	Open in IMG/M
3300015200\|Ga0173480_11116265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300015200\|Ga0173480_11126603	Not Available	525	Open in IMG/M
3300015371\|Ga0132258_11836774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1527	Open in IMG/M
3300015371\|Ga0132258_12970501	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300015372\|Ga0132256_101551616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	773	Open in IMG/M
3300015373\|Ga0132257_103256333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300015374\|Ga0132255_100249378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2536	Open in IMG/M
3300018031\|Ga0184634_10108101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1220	Open in IMG/M
3300019356\|Ga0173481_10194062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	875	Open in IMG/M
3300019356\|Ga0173481_10452602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300022756\|Ga0222622_10349779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1030	Open in IMG/M
3300022756\|Ga0222622_10958990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300022880\|Ga0247792_1071340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300022901\|Ga0247788_1094877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300022915\|Ga0247790_10036179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1106	Open in IMG/M
3300025537\|Ga0210061_1074595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300025899\|Ga0207642_10862830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300025926\|Ga0207659_10413319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1130	Open in IMG/M
3300025930\|Ga0207701_10060880	All Organisms → cellular organisms → Bacteria	3447	Open in IMG/M
3300025931\|Ga0207644_11084131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	673	Open in IMG/M
3300025933\|Ga0207706_10892208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	751	Open in IMG/M
3300025934\|Ga0207686_11519840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300025941\|Ga0207711_10267694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1572	Open in IMG/M
3300026118\|Ga0207675_102657411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300027909\|Ga0209382_12308731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300028589\|Ga0247818_10420642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	903	Open in IMG/M
3300028707\|Ga0307291_1027518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1318	Open in IMG/M
3300028713\|Ga0307303_10164988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300028718\|Ga0307307_10177016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300028755\|Ga0307316_10404150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300028768\|Ga0307280_10121927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	882	Open in IMG/M
3300028768\|Ga0307280_10157556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	787	Open in IMG/M
3300028778\|Ga0307288_10066290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1269	Open in IMG/M
3300028807\|Ga0307305_10313541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	713	Open in IMG/M
3300028809\|Ga0247824_10501411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	716	Open in IMG/M
3300028812\|Ga0247825_11099179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300028814\|Ga0307302_10526484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300028872\|Ga0307314_10014853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1721	Open in IMG/M
3300028875\|Ga0307289_10191926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	840	Open in IMG/M
3300028875\|Ga0307289_10247883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300028878\|Ga0307278_10005466	All Organisms → cellular organisms → Bacteria	6082	Open in IMG/M
3300028878\|Ga0307278_10313428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300028885\|Ga0307304_10061120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1422	Open in IMG/M
3300028889\|Ga0247827_11324750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300030336\|Ga0247826_10187469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1403	Open in IMG/M
3300031455\|Ga0307505_10245152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	833	Open in IMG/M
3300031547\|Ga0310887_11022923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300031847\|Ga0310907_10251478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	870	Open in IMG/M
3300031854\|Ga0310904_10927079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300031858\|Ga0310892_11348746	Not Available	511	Open in IMG/M
3300031943\|Ga0310885_10651993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300032000\|Ga0310903_10500950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300032013\|Ga0310906_10122591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1469	Open in IMG/M
3300034115\|Ga0364945_0202532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.82%
Host-Associated	Host-Associated	27.18%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.96%
Plants	Host-Associated → Plants	27.18%
Aquatic	Environmental → Aquatic	4.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.74%
Sediment	Environmental → Aquatic → Sediment	2.91%
Marine	Environmental → Aquatic → Marine	1.94%
Floodplain	Environmental → Terrestrial → Floodplain	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.68%
Loam	Environmental → Terrestrial → Soil → Loam	7.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.91%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.94%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.97%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.86%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	11.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.91%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.97%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.97%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	33.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	11.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.91%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.94%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.97%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.97%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002077	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022880	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300025537	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_01596630	2140918013	Soil	VWLVVSPVLAGGVLVAHSLAYRLTGTPTDPFHSYLAHVPQILLLLTLAGLALGGLGPRLQAPRAAAFPLVALTTFAAQEHLERIVHGTGVPFLLATPAFLVGLLLQVPFALAAWALARWLLRAVAPTRRRRPRRPRLVLYALSAAD
ICChiseqgaiiDRAFT_23132082	3300000033	Soil	VWLVVSPVLAGGVLVAHSLAYRLTGTPTDPFHSYLAHVPQILLLLTLAGLALGGLGPRLQAPRAAAFPLVALTTFAAQEHLERIVHGTGVPFLLATPAFLVGLLLQVPFALAAWALARWLLRAVAPTRTRRPRRPRLVLYALSAAD
ICChiseqgaiiFebDRAFT_144034971	3300000363	Soil	VTRTRVWLVVSPVLAGGVLVAHSLAYRLTGTPTDPFHSYLAHVPQILLLLTLAGLALGGLGPRLQAPRAAAFPLVALTTFAAQEHLERIVHGTGVPFLLATPAFLVGLLLQVPFALAAWALARWLLRAVAPTRTRRPRRPRLV
JGIcombinedJ13530_1087154481	3300001213	Wetland	VSRTRAWIIVFPVIAAGVLVAHALAYRLTSTPTDRFHAYLEHAPQVLLLLVLSGLVLGGFGRRRTTAPAAHVFPLVAITTFAAQEHLERLVHGGSVPILVTSPAFLLGIVLQVPFALLAWFLARWL
JGI24744J21845_100941361	3300002077	Corn, Switchgrass And Miscanthus Rhizosphere	VNRTRAWLVVSPVIAAGVLVAHALAYRLTATPTDPFHEYLAHAPQVLLLLALSGLVLAGFGPRREAPPAWVFPLVGVATFVAQEHVERIVHGGGVPILVTTPVFLVGL
Ga0062589_1025269041	3300004156	Soil	VSRTRAWIVVFPVVTAGVLVAHALAYRLTSTPTEPFHAYLGHAPQVLLLLVVSGFALGGFGRPRAAAPAAHVFPLVAITTFAAQEHLERLVHGGSFPILVTSPAFLL
Ga0062590_1006679872	3300004157	Soil	VNRTWVWLVVSPIVAAGVLTGHWLAYRLTATPTEPLHAYLGHAPQVLLLFIGAALILAALGTRMNAPSFRAFPLVGLVTFVAQEHLERLA
Ga0062595_1010454961	3300004479	Soil	VSRTRAWIVVFPVVTAGVLVAHALAYRLTSTPTEPFHAYLGHAPQVLLLLVVSGFALGGLGRSRAAAPAVHVFPLVAITTFAVQEHLERLVHGGSVPLLATSPAFLLGI
Ga0066388_1025930411	3300005332	Tropical Forest Soil	VLSPVLAAGVLVAHALAYRVTGTSTERFHAYLEHAPQVLLLLAFCGIALGGFGRRREAPAAYVFPLVAMTTFAVQEHLERLVHDGTFPFLLTSPAFVVGVLLQVPIALGVWVVARWLLAAGDEPRPRVALRPR
Ga0070692_104570302	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VWIVVSPVVAAGVLVAHSVAYRVTRTPADPFHEYLGHAPQILLLLAIAGIVIGAFGAPGQAPPAHAFPVVALGTFVVQEHVERLVHGGVPLLLTSPAFLVGLALQIPVALGAWALARWLLRAVRDEPLTVRLR
Ga0070692_106164821	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VWLVVSPVVAAGVLVAHSLAYRLTRTPTDAFHAYLGHAPQVLLLLAIAGIVVGALGAPRQAPRAHVFPLVALGTFVVQEHVERLVHGGGVPLLLTSPAFLAGLAL
Ga0070675_1001693603	3300005354	Miscanthus Rhizosphere	VNRTRAWLVVSPVIAAGVLVAHALAYRLTATPTDPFHEYLAHAPQVLLLLALSGLVLAGFGPRREAPPAWVFPLVGVATFVAQEHVERIVHGGGV
Ga0070671_1012507781	3300005355	Switchgrass Rhizosphere	VSRTRAWIVVFPVVTAGVLVAHALAYRLTSTPTEPFHAYLGHAPQVLLLLVVSGFALGGFGRPRAAAPAAHVCPLVAITTFAAQEHLERLVHGGSFPILVTSPAFLLGIALQVPFALLA
Ga0070663_1016864411	3300005455	Corn Rhizosphere	VNRTRAWLVVSPVIAAGVLVAHALAYRLTATPTDPFHEYLAHAPQVLLLLALSGLVLAGFGPRREAPPAWVFPLVGVATFVAQEH
Ga0070678_1022730392	3300005456	Miscanthus Rhizosphere	VWIVVSPVVAAGVLVAHSVAYRVTRTPADPFHEYLGHAPQILLLLAIAGIVIGAFGAPGQAPPAHAFPVVALGTFVVQEHVERLVHGGVPLLLTSPA
Ga0070662_1013789691	3300005457	Corn Rhizosphere	VSRTRAWIVVFPVVTAGVLVAHALAYRLTSTPTEPFHAYLGHAPQVLLLLVVSGFALGGFGRPRAAAPAAHVFPLVAITTFAAQEHLERLVHGGSFPILVTSPAFLLGIALQVPFALLAWLLARWLLS
Ga0070685_111974181	3300005466	Switchgrass Rhizosphere	VSRTRAWIVVFPVVTAGVLVAHALAYRLTSTPTEPFHAYLGHAPQVLLLLVVSGFALGGLGRSRAAAPAVHVFPLVAITTFAVQEHLERLVHGGSVPLLATSPAFLLGIALQVPFALLAWLLARWLLSA
Ga0070686_1012969022	3300005544	Switchgrass Rhizosphere	VNRTRAWLVVSPVIAAGVLVAHALAYRLTATPTDPFHEYLAHAPQVLLLLALSGLVLAGFGPRREAPPAWVFPLVGVATFVAQEHVERIVHGGGVPILV
Ga0068854_1019500952	3300005578	Corn Rhizosphere	VNRTRAWLVVSPVIAAGVLVAHALAYRLTATPTDPFHEYLAHAPQVLLLLALSGLVLAGFGPRREAPPAWVFPLVGVATFVAQEHVERIVHGGGVPIL
Ga0070702_1013519721	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VSRTRAWIVVFPVVTAGVLVAHALAYRLTATPTEPFHAYLGHAPQVLLLLVVSGFALGGFGRPRAAAPAAHVFPLVAITTFAAQEHLERLVHGGSFPILVTSPAFLLGIALQVPFALLAWLLARWLLSA
Ga0066905_1016230021	3300005713	Tropical Forest Soil	VTRTRVWLVVSPVSATGVLVAHSLAYRVTGAPTDPFHAYLGHAPQVLLLLAVAGIVLGALGAPRQGPPAYAFPLAALGTFVVQEHVERLVHGGVPLLLASPAFLVGLALQMPVALGAWAL
Ga0066905_1017182771	3300005713	Tropical Forest Soil	VLSPVLAAGVLVSHALAYRVTGTPTERFHAYLGHAPQVLLLLAFCGIALGGFGRRREAPAAYVFPLVAMTTFAVQEHLERLVHEGTFPFLLTSPAFVVGVLLQVP
Ga0074049_131099252	3300006580	Soil	VNRTRVWLVVSPVVAGGVLLAHSLAYRLTATPTDPFHSYLEHVPQILLLLTLAGLLLARVGSRLDAPLPAAFPLVALTTFVLQEHVERIVHGGGVPFLL
Ga0074057_110615421	3300006605	Soil	VNRTRVWLVVSPVVAGGVLLAHSLAYRLTATPTDPFHSYLEHVPQILLLLTLAGLLLARVGSRLDAPLPAAFPLVALTTFVLQEHVERIVHGGGVP
Ga0075421_1027527482	3300006845	Populus Rhizosphere	VNRTRVWLVVSPVVAAGVLIAHSVAYRLTSTPTDPFHAYLGHAPQVLLLLAIAGIVVAALGRPRSAAPAHVFPVVALATFVVQEHVERIVHGGVPLLLTSPAFLVGLALQ
Ga0075426_113468561	3300006903	Populus Rhizosphere	VLSPVLAAGVLVSHALAYRITGTPTERFHAYLGHAPQVLLLLTFLGIVLGGVGRIGTAPAAHVFPLVAVTTFALQEHLERIVHGGSFPVLVTSPAFVVGLLLQVPFALLAWVVARWLL
Ga0111539_122020571	3300009094	Populus Rhizosphere	VNRTRVWLVVSPVVAAGVLIAHSVAYRLTSTPTDPFHAYLGHAPQVLLLLAITGIVVAALGRPRSAPPAHGFPVVALATFVVQEHVERVVHGGVPMLLTSPAFLVGLVLQVPVALVAWGL
Ga0075418_107497002	3300009100	Populus Rhizosphere	VNRTRAWLVVSPVIAAGVLVAHALAYRITSTPADPLHEYLGHAPQVLLLLTLSGFALAGFGRRRDSPPAWIFPVVAVATFVAQEHVERLVHGGGVPILVTTPVFLVGLALQIPVALVAWA
Ga0114129_131586612	3300009147	Populus Rhizosphere	VWLVVSPVVAAGVLVAHSLAYRLTGTPTDAFHAYLRHAPQVLLLLAIAGVVVGALGAPRQAPRAHVFPLVALGTFVVQEHVERLVHGGGVPLLLTSPAFLAGLALQVPIAVGAWALARWLLRVVHEE
Ga0105243_126071992	3300009148	Miscanthus Rhizosphere	VSRTRAWIVVFPVVTAGVLVAHALAYRLTSTPTEPFHAYLGHAPQVLLLLVLSGFAFGGLGRSRAAAPAVHVFPLVAITTFAVQEHLERLVHGGSIPLLA
Ga0075423_120681931	3300009162	Populus Rhizosphere	VLSPVLAAGVLVSHALAYRVTGTPTEPFHAYLEHAPQVLLVLALCGIALGGFGRRREAPAAYVFPVVALTTFSAQEHLERLVHEGTFPFLLTSPVFVVGLLLQVP
Ga0105242_123233321	3300009176	Miscanthus Rhizosphere	VNRTWVWLVVSPVAAAGVLIGHGLAYRLTSTPTDPFHAYLEHAPQVLLILTVAGMILAALGTRTNAPPARAFPLVAIATFVVQEHLERLVHGGG
Ga0126382_121244212	3300010047	Tropical Forest Soil	VNRTRAWLVLSPVLAAGVLVAHAVAYRITGTPTERFHAYLGHAPQVLLVVAICGIALGGFGRRRETPAAYVFPLVATAAFAVQERLVHEGTFPFLLTSPAFVVGVLLQVPVALAAWFLARWLL
Ga0134122_121872091	3300010400	Terrestrial Soil	VNRTWVWLVVSPVAAAGVLIGHGLAYRLTSTPTDPFHAYLEHAPQVLLILTVAGVILAALGTRTNAPPARTFPLVAIATFVVQEHLERLVHGGGVPMILT
Ga0134123_121126732	3300010403	Terrestrial Soil	VWLVVSPVVAAGVLVAHSLAYRLTGTPTDAFHAYLGHAPQVLLLLTIAGIVVGALGAPRQAPPAHDFPFVALGTFVVQEHVERLVHGGGVPLLLTSPAFLAGLALQVPVALGAWAL
Ga0157284_100854982	3300012893	Soil	VWIVVSPVVAAGVLVAHSVAYRVTGTPADPFHEYLGHAPQILLLLAIAGIVIGAFGTPGQAPPAHAFPVVALGTFVVQEHVERLVHGGVPLLLTSPAFLVGLALQI
Ga0157288_103974132	3300012901	Soil	VNRTWVWLVVSPVVAAGVLTGHWLAYQLTATPTEPLHAYLAHAPEVLLIFAAAALLLAALGTSINAPPVRTFPLVGLATFVVQEHLERL
Ga0157296_103101782	3300012905	Soil	VARTRVWLVVSPVVAAGVLVAHSLAYRLTGTPTDAFHAYLGHAPQVLLLLTIAGIVVGALGAPRQAPPAHVFPFVALGTFVVQEHVERLVHGGGVPLLLTSPAFLAGLALQVEG
Ga0157283_100075111	3300012907	Soil	VWIVVSPVVAAGVLVAHSVAYRVTGTSADPFHEYLGHAPQILLLLAIAGIVIGAFGTPGQAPPAHAFPVVALGTFVVQEHVERLVHGGVPLLLTSPAFLVGLALQIPVALGAWALARWLLRAVRDEP
Ga0157301_104514531	3300012911	Soil	VNRTRVWLVVSPIVAAGVLMAHSVAYRLTSTATDPFHAYLGHAPQVLLLLAIAGIVVAALGGPRSAPPAHVFPVVALATFVVQEHVERIVHDGVPLLVTSPAFLVGLALQ
Ga0157306_104226091	3300012912	Soil	VWLVVSPVVAAGVLVAHSLAYRLTGTPTDAFHAYLGHAPQVLLLLAIAGIVVGALGAPRQAPPAHVFPLVALGTFVVQEHVERLVHGGGVPLLLTAPAFLAGLALQVPVALGAWALARWLLRVVHDERPTVGLRSRLQF
Ga0157298_100472941	3300012913	Soil	VWIVVSPVVAAGVLVAHSVAYRVTRTPADPFHEYLGHAPQILLLLAIAGIVIGAFGAPGQAPPAHAFPVVALGTFVVQEHVERLVHGGVPLLLTSPAFLVGLALQIPVALGAWALAR
Ga0157297_105194792	3300012914	Soil	VWIVVSPVVAAGVLVAHSVAYRVTGTSADPFHEYLGHAPQILLLLAIAGIVIGAFGTPGQAPPAHAFPVVALGTFVVQEHVERLVHGGVPLLLTSPAFLVGLALQIPVALGAWALARWLLRA
Ga0157310_105834801	3300012916	Soil	VWIVVSPVVAAGVLVAHSVAYRVTGTPADPFHEYLGHAPQILLLLAIAGIVIGAFGTPGQAPPAHAFPVVALGTFVVQEHVERLVHGGVPLLLTSPAFLVGLALQIPVALGAWALARWLLRAVRDEPLTVRLR
Ga0164302_105076061	3300012961	Soil	VSPVLAAGVLVGHTLAYRLTGTPADAFHSYLQHVPQILLIASLLGLALGGAGRRLDAPNPVFFGAIAVTTFVLQEHVERLVHEGTLPLLL
Ga0164302_113702001	3300012961	Soil	VNRTRAWFVLSPVLAAGVLVSHALAYRITATPTERFHAYLGHAPQVLLLLTFFGIVLGGVGRRGSAPAAHVFPLVAVTTFALQEHLERIVHGGSFPVLVTSPAFVVGLLLQVPVALVAWVVS
Ga0173483_102778702	3300015077	Soil	VNRTRAWLAVSPVVAAGVLAAHALAYSLTSTPTGPFHEYLAHAPQVLLLLTFSGLALAGFGQRRDAPPAWVFPLAAVVTFVAQEHVERIVHGGGVPILVTTPVFL
Ga0173480_111162651	3300015200	Soil	VNRTWVWLVVSPVVAAGVLTGHWLAYQLTATPTEPLHAYLAHAPEVLLIFAAAALLLAALGTSINAPPVRTFPLVGLATFVVQEHLERLAHGGGLPMLLTSPAFVVGLTL
Ga0173480_111266031	3300015200	Soil	VWLVVSPVVAAGVLVAHSLAYRLTGTPTDAFHAYLGHAPQVLLLLAIAGIVVGALGAPRQAPPAHVFPLVALGTFVVQEHVERLVHGGGVPLLLTSPAFLAGLALQVPVALGA
Ga0132258_118367741	3300015371	Arabidopsis Rhizosphere	VLSPVLATGVLVSHALAYRITATPTERFHAYLGHAPQVLLLLTFFGIVLGGVGRRGTAPAAHVFPLVAVTTFALQEHLERIVHGGSFPVLVTSPAFVVGLLLQVPVALVAWVV
Ga0132258_129705011	3300015371	Arabidopsis Rhizosphere	VSRTRAWIVVFPVVTAGVLVAHALAYRLTSTPTEPFHAYLGHAPQVLLLLVVSGFALGGFGRPRAAAPAAHVCPLVAITTFAAQEHLERLVHGGSFPILVTSPAFLLGIALQVPFALLAWLLARWLLSAAADAL
Ga0132256_1015516161	3300015372	Arabidopsis Rhizosphere	VLSPVLAAGVLVSHALAYRVTGTPTERFHAYLEHAPQVLLVLALCGIVLGGFGRRREAPAAYVFPLIAMTTFAVQEHLERVVHEGTLPFLLASPVFVVGVLLQIPVALGAWVLARWLLAA
Ga0132257_1032563332	3300015373	Arabidopsis Rhizosphere	VNRTRAWLVVSPVIAAGVLVAHALAYRLTSTPAGPFHEYIAHAPQVLLLLALSGLALAGFGSRREAPPAWIFPLGAMTTFAAQEHL
Ga0132255_1002493781	3300015374	Arabidopsis Rhizosphere	VSRTRAWIVVFPVVTAGVLIAHALAYRLTSTPTEPFHAYLGHAPQVLLLLVVSGFALGGFGRPRAAAPAAHVFPLVAITTFAAQEHLERLVHGGSFPILVTSPAFLLGI
Ga0184634_101081011	3300018031	Groundwater Sediment	VNRTRVWLVVSPVVAAGVLTAHWFAYRLTSTPTDPFHGYLEHAPQVLLLLALAGVILAAVTARVDAPPTRAFPLVGLATFVLQEHLERLVHGGGVPFLLTSPAFLLGLALQIPVALVAWALARW
Ga0173481_101940622	3300019356	Soil	VTRTRVWLVVSPVVAAGVLVAHSLAYRLTGTPTDAFHAYLGHAPQVLLLLTIAGIVVGALGAPRQAPPAHVFPFVALGTFVVQEHVERLVHGGGVPLLLTAPAFLAG
Ga0173481_104526022	3300019356	Soil	VTRARVWLVVSPVVAAGVLVAHSLAYRLTGTPTDAFHAYLGHAPQVLLLLAIAGIVVGALGAPRQAPPAHVFPLVALGTFVVQEHVERLVHGGGVPLLLTAPAFLAGLAL
Ga0222622_103497791	3300022756	Groundwater Sediment	VNRTRVWLVVSPVVAGGVLLAHSLAYRLTAAPTDPFHSYLEHVPQILLLTTLAGLALGGLGPRLQAPPVAAFPMVALAAFAAQEHLERLV
Ga0222622_109589902	3300022756	Groundwater Sediment	VNRTRVWLVVSPVVVAGVLTGHWLAYRLTATPTEPLHAYLEHAPEVLLLLAAAALILAALGTCMNTPPVRTFPLLGLATFVLQEHLERLVHGGGLPMLLTSPAFVAGLALQIPVALVAWAVARWLL
Ga0247792_10713401	3300022880	Soil	VTRARVWLVVSPVVAAGVLVAHSLAYRLTGTPTDAFHAYLGHAPQVLLLLAIAGIVVGALGAPRQAPPAHVFPLVALGTFVVQEHVERLVHGGGVPLLLTAPAFLAGLALQVPVALGAWALA
Ga0247788_10948772	3300022901	Soil	VTRTRVWLVVSPVVAAGVLVAHSLAYRLTGTPTDAFHAYLGHAPQVLLLLTIAGIVVGALGAPRQAPPAHVFPFVALGTFVVQEHVERLVHGGGVPLLLTSPAF
Ga0247790_100361792	3300022915	Soil	VTRTRVWLVVSPVVAAGVLVAHSLAYRLTGTPTDAFHAYLGHAPQVLLLLTIAGIVVGALGAPRQAPPAHVFPFVALGTFVVQEHVERLVHGGGVPLLLTSPAFLAGLALQIPVALGAWALA
Ga0210061_10745952	3300025537	Natural And Restored Wetlands	VNRTRAWLVVSPVVATGVLVAHALAYRLTSTPTDPFHEYLSHAPQVLLLLTLSGLVLAGLGSRREAPPAWVFPVLALVTFVAQ
Ga0207642_108628301	3300025899	Miscanthus Rhizosphere	VNRTRAWLVVSPVIAAGVLVAHALAYRLTATPTDPFHEYLAHAPQVLLLLALSGLVLAGFGPRREAPPAWVFPLVGVATFVAQEHVERIVHGGGVPI
Ga0207659_104133191	3300025926	Miscanthus Rhizosphere	VNRTRAWLVVSPVIAAGVLVAHALAYRLTATPTDPFHEYLAHAPQVLLLLALSGLVLAGFGPRREAPPAWVFPLVGVATFVAQEHVERIVHGGGVPILVTTPVFLVGLALQLPVALVAWF
Ga0207701_100608801	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VWIVVSPVVAAGVLVAHSVAYRVTGTPADPFHEYLGHAPQILLLLAIAGIVIGAFGTPGQAPPAHAFPVVALGTFVVQEHVERLVHGGVPLLLTSPAFLVGLALQIPVALGAWALARWLLRA
Ga0207644_110841311	3300025931	Switchgrass Rhizosphere	VSRTRAWIVVFPVVTAGVLVAHALAYRLTSTPTEPFHAYLGHAPQVLLLLVVSGFALGGFGRPRAAAPAAHVCPLVAITTFAAQEHLERLVHGGSFPILVTSPAFLLGIALQVPFALLAWLL
Ga0207706_108922082	3300025933	Corn Rhizosphere	VTRTRVWLVVSPVVAAGVLVAHSLAYRLTGTPTDAFHAYLGHAPQVLLLLAIAGIVVGALGAPRQAPRAHVFPLVALGTFVVQEHVERLVHGGGVPLLLTSPAFLAGLALQVPIAVGA
Ga0207686_115198401	3300025934	Miscanthus Rhizosphere	VNRTWVWLVVSPVAAAGVLIGHGLAYRLTSTPTDPFHAYLEHAPQVLLILTVAGMILAALGTRTNAPPARAFPLVAIATFVVQEHLERLV
Ga0207711_102676942	3300025941	Switchgrass Rhizosphere	MRTRVWLVVSPAVAAGVLVAHSVAYRVTGTPADPFHEYLGHAPQILLLLAIAGIVIGAFGTPGQAPPAHAFPVVALGTFVVQEHVERLVHGGVPLLLTSPAFLVGLALQIPVALGAWALARWLLRAVGD
Ga0207675_1026574111	3300026118	Switchgrass Rhizosphere	VNRTRAWLVVSPVIAAGVLVAHALAYRLTATPTDPFHEYLAHAPQVLLLLALSGLVLAGFGPRREAPPAWVFPLVGVATFVAQEHVERIVHGGGVPILVTTPVFL
Ga0209382_123087312	3300027909	Populus Rhizosphere	VSSTRAWLVVSPVSAAGVLVGHALAYRLTSTPTDPFHEYLAHAPQVLLLLALSGLVLAGFGTRRDALPAWVFPAVAVATFGAQEHVSG
Ga0247818_104206422	3300028589	Soil	VNRTWVWLVVSPVVAAGVLTGHWLAYQLTATPTEPLHAYLAHAPEVLLIFAAAALLLAALGTSINAPPVRTFPLVGLATFVVQEHLERLAHG
Ga0307291_10275181	3300028707	Soil	VNRTRAWLVVSPVLAAGVLVAHTLAYRLTGTPTDAFHEYLAHVPQILLLVALAGLGLGGLGARVDAPRPVFFAAVALTTFVAQEHLERLVHGGGVP
Ga0307303_101649882	3300028713	Soil	VSPVLAAGVLVAHTLAYRLTGTPTDAFHEYLAHVPQILLLVALAGLGLGGLGARVDAPRPVFFAAVALTTFVAQEHLERLVHGGGVPMLLTTPAFVVGVLLQIPVALVAWT
Ga0307307_101770161	3300028718	Soil	VSPVLAAGVLVAHTLAYRLTGTPTDAFHEYLAHVPQILLLVALAGLGLGGLGARVDAPRPVFFAAVALTTFVAQEHLERLVHGGGVPMLLTTPAFVVGVLL
Ga0307316_104041501	3300028755	Soil	VNRTRVWLVVSPVVAGGVLLAHSLAYRLTAAPTDPFHSYLEHVPQILLLLVLAGLVLARFASRLDAPLPATFPLVALTTFVL
Ga0307280_101219271	3300028768	Soil	VSPVLAAGVLVAHTLAYRLTGTPTDAFHAYLAHVPQILLLVALAGLGLGGLGSRVDAPRPVFFAAVAVTTFVAQEHLERLVHGGGIPMLLTAP
Ga0307280_101575561	3300028768	Soil	VNRTRVWLVVSPVVAGGLLVAHSLAYRLTATATDPFHSYLEHVPQILLLLVLAGLVLARFGSRLDAPLPATFPLVALTTFVLQEHVERMVHGGGVPFLLTTPAFLVGLLLQ
Ga0307288_100662901	3300028778	Soil	VNRTRAWLVVSPVLAAGVLVAHTLAYRLTGTPTDAFHEYLAHVPQILLLVALAGLGLGGLGARVDAPRPVFFAAVALTTFVAQEHLERLVHGGGVPMLLTTPAFVVGVLLQIPVALVAWALARWLLSAVAESR
Ga0307299_102749871	3300028793	Soil	VNRTRVWLVVSPVVAGGVLLAHSLAYRLTAAPTDPFHSYLEHVPQILLLLVLAGLVLARFGSRLDAPLPAAFP
Ga0307305_103135411	3300028807	Soil	VNRTRVWLVVSPVVAGGVLLAHSLAYRLTAAPTDPFHSYLEHVPQILLLLVLAGLVLARFGSRLDAPLPAAFPLVALTTFVLQEHVERMVHGGGVPFLLTT
Ga0247824_105014112	3300028809	Soil	VNRTWVWLVVSPVVAAGVLTGHWLAYQLTATPTEPLHAYLAHAPEVLLIFAAAALLLAALGTSINAPPVRTFPLVGLATFVVQEHLERLAHGGGLPMLLTSPAFVVGLTLQIPVALVAWAVARWLL
Ga0247825_110991791	3300028812	Soil	VNRTWVWLVVSPVVAAGVLTGHWLAYQLTATPTEPLHAYLAHAPEVLLIFAAAALLLAALGTSINAPPVRTFPLVGLATFVVQEHLERLAHGGGLPMLLTSPAFVVGLTLQIPVALVAWAVARW
Ga0307302_105264842	3300028814	Soil	VNRTRVWLVVSPVVAAGVLTAHWFAYRLTSTPTDPFHGYLEHAPQVLLLLALAGVILAAVTARVDAPPTRAFPLVGLATFVLQEHLERLVHGGGLPFLLT
Ga0307314_100148531	3300028872	Soil	VNRTRAWLVVSPVVAVGVLVAHTLAYRLTGTPTDAFHAYLAHVPQILLLVALAGLGLGGLGARVDAPRPVFFAAVALTTFVAQEHLERLVH
Ga0307289_101919262	3300028875	Soil	VNRTRVWLVVSPVVAGGVLLAHSLAYRLTAAPTDPFHSYLEHVPQILLLLVLAGLLLARIGSRLDVPLPAAFPLVALMTFVLQEH
Ga0307289_102478832	3300028875	Soil	VNRTRVWLVVSPVVAGGVLVAHSLAYRLTATPTDPFHSYLEHVPQILLLLMLAGLALGGIGTRLHVPPAAAFPIVAITTFAAQEHVERIVHGAGVP
Ga0307278_100054666	3300028878	Soil	VWLVVSPVVAGGVLVAHSLAYRLTATPTDPFHSYLEHVPQILLLLMLAGLALGGIGTRLHVPPAAAFPIVAITTFAAQEHVERIVHGAGVPFLLTTPAFVVGLLLQVPFAL
Ga0307278_103134281	3300028878	Soil	VNRTRVWLVVLPVLAGGVVVAHSLAYRLTGTPTDPFHSYLEHVPQILLLTTLAGLALGGLGPRLQAPPVAAFPVVALTTFAAQEHLERLVHGAG
Ga0307308_101460522	3300028884	Soil	VNRTRVWLVVSPVVAGGVLLAHSLAYRLTAAPTDPFHSYLEHVPQILLLLVLAGLMLARFASRLDAPLPATF
Ga0307304_100611201	3300028885	Soil	VNRTRAWLVVSPVLAAGVLVAHTLAYRLTGTPTDAFHEYLAHVPQILLLVALAGLGLGGLGARVDAPRPVFFAAVAATT
Ga0247827_113247502	3300028889	Soil	VNRTRVWLLVSPIVAAGVLIAHSVAYRLTSTPTDPFHAYLGHAPQVLLLIAIGGIVVAALGRPRSAPPAQVFPLVALATFVVQEHVERIVHGGVPMLLTSPAFLVG
Ga0247826_101874692	3300030336	Soil	VTRTRVWLVVSPVVAAGVLVAHSLAYRLTGTPTDAFHAYLGHAPQVLLLLAIAGIVVGALGAPRQAPPAHVFPFVALGTFVVQEHVERDEGKD
Ga0307505_102451521	3300031455	Soil	VNRTRAWLVVSPVSAAGVLVAHSLAYRLTSTPTDPFHEYLAHAPQVLLLLALSGLALAGFGPRRDAPPAWVFPLVGIATFVAQEHVERIAHGE
Ga0310887_110229232	3300031547	Soil	VWLVVSPAVAAGVLVAHSVAYRVTGTPADPFHEYLGHAPQILLLLAIAGIVIGAFGAPGQAPPAHTFPVVALGTFVVQEHVERLVHGGVPLLLTSPAFLVGLALQIPVAL
Ga0310907_102514781	3300031847	Soil	VNRTRVWLVVSPVVAAGVLIAHSVAYRLTSTPTDPFHAYLGHAPQVLLLIAIGGIVVAALGRPRSAPPARVFPVVALATFVVQEHVERVVHGGVPMLL
Ga0310904_109270792	3300031854	Soil	VNRTRVWLVVSPVVAAGVLIAHSVAYRLTSTPTDPFHAYLGHAPQVLLLLAIAGIVVAALGRPRSAPPAHGFPVVALATFVVQEHVERIVHGGVPLLLTSPAFLV
Ga0310892_113487461	3300031858	Soil	VTRTRVWLVVSPVVAAGVLVAHSLAYRLTGTPTDAFHAYLGHAPQVLLLLAIAGIVVGALGAPRQAPPAHVFPFVALGTFVVQEHVERLVHGGGVPLLLTSPAFLAGLALQVPVALGA
Ga0310885_106519931	3300031943	Soil	VNRTWVWLVVSPVVAAGVLTGHWLAYQLTATPTEPLHAYLAHAPEVLLIFAAAALLLAALGTSINAPSVRTFPLVGLATFVVQEHLERLAHGGGLPMLLTSPAFVVGL
Ga0310903_105009501	3300032000	Soil	VTRTRVWLVVSPVVAAGVLVAHSLAYRLTGTPTDAFHAYLGHAPQVLLLLAIAGIVVGALGAPRQAPPAHVFPFVALGTFVVQEHVERLVHGGGVPLLLTSPAFLAGLALQAPVALGAWALARWLLRVVHD
Ga0310906_101225911	3300032013	Soil	VNRTWVWLVVSPVVAAGVLTGHWLAYQLTATPTEPLHAYLAHAPEVLLIFAAAALLLAALGTSINAPPVRTFPLVGLATFVVQEHLERLAHGGGLPMLLTSPA
Ga0364945_0202532_3_266	3300034115	Sediment	VNRTRVWLVVSPVVAAGVLTAHCLAYRLTSTPTDPFHGYLEHAPQVLLLLALAGVILAAVTARVDAPPTRAFPLVGLVTFVLQEHLER

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099244

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences