NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F099468

Metagenome / Metatranscriptome Family F099468

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F099468
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 63 residues
Representative Sequence MDHLMIVMAAGKTLIVSSDSRGNEVVGCKKLVTRTGVQQPATKPKRQQLYFTHAAPLEK
Number of Associated Samples 74
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 57.28 %
% of genes near scaffold ends (potentially truncated) 36.89 %
% of genes from short scaffolds (< 2000 bps) 77.67 %
Associated GOLD sequencing projects 63
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (81.553 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere
(9.709 % of family members)
Environment Ontology (ENVO) Unclassified
(38.835 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(53.398 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 27.59%    Coil/Unstructured: 72.41%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF00072Response_reg 49.51
PF02518HATPase_c 11.65
PF01590GAF 3.88
PF13492GAF_3 2.91
PF00012HSP70 1.94
PF01839FG-GAP 0.97
PF00149Metallophos 0.97
PF01435Peptidase_M48 0.97
PF03551PadR 0.97
PF07963N_methyl 0.97
PF08281Sigma70_r4_2 0.97
PF10589NADH_4Fe-4S 0.97
PF00574CLP_protease 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG0443Molecular chaperone DnaK (HSP70)Posttranslational modification, protein turnover, chaperones [O] 1.94
COG0616Periplasmic serine protease, ClpP classPosttranslational modification, protein turnover, chaperones [O] 1.94
COG0740ATP-dependent protease ClpP, protease subunitPosttranslational modification, protein turnover, chaperones [O] 1.94
COG1030Membrane-bound serine protease NfeD, ClpP classPosttranslational modification, protein turnover, chaperones [O] 0.97
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 0.97
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.97
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.97

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms81.55 %
UnclassifiedrootN/A18.45 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_104485483All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia697Open in IMG/M
3300003323|rootH1_10094815All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1909Open in IMG/M
3300004153|Ga0063455_100805718All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium651Open in IMG/M
3300004803|Ga0058862_12066151All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia722Open in IMG/M
3300005336|Ga0070680_101011042All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia718Open in IMG/M
3300005341|Ga0070691_10169080All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1132Open in IMG/M
3300005435|Ga0070714_100049870All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia3564Open in IMG/M
3300005455|Ga0070663_102147302Not Available504Open in IMG/M
3300005458|Ga0070681_10024358All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia6093Open in IMG/M
3300005458|Ga0070681_11585274All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia580Open in IMG/M
3300005458|Ga0070681_11814563Not Available537Open in IMG/M
3300005466|Ga0070685_10037757All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2737Open in IMG/M
3300005538|Ga0070731_10136567All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1625Open in IMG/M
3300005563|Ga0068855_100045058All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia5218Open in IMG/M
3300005563|Ga0068855_100320726All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1713Open in IMG/M
3300005578|Ga0068854_101718795All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia574Open in IMG/M
3300006046|Ga0066652_100246590All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1562Open in IMG/M
3300006237|Ga0097621_100493602All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1108Open in IMG/M
3300006755|Ga0079222_11858468All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia585Open in IMG/M
3300006804|Ga0079221_11469532Not Available546Open in IMG/M
3300009093|Ga0105240_10057949All Organisms → cellular organisms → Bacteria4837Open in IMG/M
3300009093|Ga0105240_10519158All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1322Open in IMG/M
3300009093|Ga0105240_12351667All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia552Open in IMG/M
3300009174|Ga0105241_10638802All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia966Open in IMG/M
3300009551|Ga0105238_11459243Not Available712Open in IMG/M
3300009551|Ga0105238_12290523Not Available575Open in IMG/M
3300010048|Ga0126373_11499118All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium740Open in IMG/M
3300010048|Ga0126373_13032608All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia523Open in IMG/M
3300010359|Ga0126376_10261323All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales1480Open in IMG/M
3300010371|Ga0134125_10061527All Organisms → cellular organisms → Bacteria4179Open in IMG/M
3300010371|Ga0134125_10764510All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1064Open in IMG/M
3300010371|Ga0134125_11446065All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia749Open in IMG/M
3300010373|Ga0134128_10004304All Organisms → cellular organisms → Bacteria17441Open in IMG/M
3300010373|Ga0134128_10070247Not Available4015Open in IMG/M
3300010373|Ga0134128_11703631All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia694Open in IMG/M
3300010396|Ga0134126_11324094All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia797Open in IMG/M
3300010396|Ga0134126_12904388All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia519Open in IMG/M
3300010398|Ga0126383_13137075All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia540Open in IMG/M
3300010399|Ga0134127_13580675Not Available509Open in IMG/M
3300012212|Ga0150985_108827210All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia792Open in IMG/M
3300012469|Ga0150984_109954344Not Available1817Open in IMG/M
3300012469|Ga0150984_111416286All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia512Open in IMG/M
3300012469|Ga0150984_114713756All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia835Open in IMG/M
3300012469|Ga0150984_115362574All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1093Open in IMG/M
3300012924|Ga0137413_11175224All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia610Open in IMG/M
3300012929|Ga0137404_10016516All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia5239Open in IMG/M
3300013100|Ga0157373_10828618Not Available683Open in IMG/M
3300013104|Ga0157370_10075339All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia3181Open in IMG/M
3300013296|Ga0157374_10200210All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1955Open in IMG/M
3300013296|Ga0157374_10999646All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia856Open in IMG/M
3300013296|Ga0157374_12631664All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium531Open in IMG/M
3300013308|Ga0157375_10697500All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1169Open in IMG/M
3300014968|Ga0157379_11765494Not Available607Open in IMG/M
3300015374|Ga0132255_104155775Not Available614Open in IMG/M
3300019886|Ga0193727_1100738Not Available852Open in IMG/M
3300019886|Ga0193727_1178558All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium548Open in IMG/M
3300019890|Ga0193728_1030425All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2685Open in IMG/M
3300020021|Ga0193726_1012020All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales4618Open in IMG/M
3300020199|Ga0179592_10328249Not Available676Open in IMG/M
3300021560|Ga0126371_10455079All Organisms → cellular organisms → Bacteria1426Open in IMG/M
3300021560|Ga0126371_10901004All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1028Open in IMG/M
3300025909|Ga0207705_11487927All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia513Open in IMG/M
3300025912|Ga0207707_10059257Not Available3332Open in IMG/M
3300025912|Ga0207707_10110551All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2402Open in IMG/M
3300025913|Ga0207695_10027466All Organisms → cellular organisms → Bacteria6337Open in IMG/M
3300025915|Ga0207693_11001845Not Available638Open in IMG/M
3300025917|Ga0207660_10718017All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia815Open in IMG/M
3300025924|Ga0207694_10019341All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium5149Open in IMG/M
3300025924|Ga0207694_11305306Not Available614Open in IMG/M
3300025924|Ga0207694_11538852All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia561Open in IMG/M
3300025929|Ga0207664_10040836All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales3611Open in IMG/M
3300025949|Ga0207667_10069668All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia3661Open in IMG/M
3300025981|Ga0207640_11357664All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia636Open in IMG/M
3300026116|Ga0207674_11166491Not Available740Open in IMG/M
3300026116|Ga0207674_11206673All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia726Open in IMG/M
3300027869|Ga0209579_10011502All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula5355Open in IMG/M
3300028536|Ga0137415_10607853All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium904Open in IMG/M
3300028563|Ga0265319_1260840Not Available528Open in IMG/M
3300028573|Ga0265334_10010948All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales3827Open in IMG/M
3300028800|Ga0265338_10028094All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula5622Open in IMG/M
3300028800|Ga0265338_10718317All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium689Open in IMG/M
3300028800|Ga0265338_10901914All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia602Open in IMG/M
3300030521|Ga0307511_10139322All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1432Open in IMG/M
3300031057|Ga0170834_104460093All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia855Open in IMG/M
3300031064|Ga0102767_11064288All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia546Open in IMG/M
3300031128|Ga0170823_11175091All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia569Open in IMG/M
3300031231|Ga0170824_115089063All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium775Open in IMG/M
3300031231|Ga0170824_128875572All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia714Open in IMG/M
3300031232|Ga0302323_100239365All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1854Open in IMG/M
3300031446|Ga0170820_15951768All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia826Open in IMG/M
3300031474|Ga0170818_104643638All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium574Open in IMG/M
3300031474|Ga0170818_104687922All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia560Open in IMG/M
3300031708|Ga0310686_119680393All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia685Open in IMG/M
3300031726|Ga0302321_100726664All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1116Open in IMG/M
3300031754|Ga0307475_10704485All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia805Open in IMG/M
3300031754|Ga0307475_10796657All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia750Open in IMG/M
3300031947|Ga0310909_10878774All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium737Open in IMG/M
3300031962|Ga0307479_10366599All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1424Open in IMG/M
3300032515|Ga0348332_13260486All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia761Open in IMG/M
3300032770|Ga0335085_10001432All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula50843Open in IMG/M
3300032893|Ga0335069_12423080Not Available545Open in IMG/M
3300033475|Ga0310811_10012834All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula10894Open in IMG/M
3300033475|Ga0310811_10321810All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1761Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere9.71%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil8.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.80%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil6.80%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere6.80%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere6.80%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.83%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere4.85%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.88%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere3.88%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.91%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.94%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.94%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.94%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.94%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.94%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen1.94%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.94%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.94%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.97%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.97%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.97%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.97%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.97%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.97%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza0.97%
Sugarcane Root And Bulk SoilHost-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil0.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.97%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300003323Sugarcane root Sample H1Host-AssociatedOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004803Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020021Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028563Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaGHost-AssociatedOpen in IMG/M
3300028573Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaGHost-AssociatedOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300030521Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EMHost-AssociatedOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031064Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 3C (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10448548323300000364SoilMDHLMIVMAAGKTLIVSSDSRGKQVISCQKLVTRTGVQQPAARPKRQQLFLTVAGPLEK*
rootH1_1009481523300003323Sugarcane Root And Bulk SoilMDHLMIVMAAGKSLIVSSDERGNQVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK*
Ga0063455_10080571813300004153SoilMIVMAAGKTLIVSSDSRGKQVISCQKLVTRTGVQQPAARPKRQQLFLT
Ga0058862_1206615113300004803Host-AssociatedKKQFDRIGNRMDHLMIVMAAGKTLVVSSDARGNEVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK*
Ga0070680_10101104223300005336Corn RhizosphereMDHLMIVMAAGKTLIVSSDSRGQEVVGCKKLVTRTGVQQPATKPKRQQLYFTHAAPLEK*
Ga0070691_1016908013300005341Corn, Switchgrass And Miscanthus RhizosphereMDHLMIVMAAGKSLIVSSNSRGNEIVGCKRLVTRTGVQQPATKPKRQQFFFTHAAPLEK*
Ga0070714_10004987023300005435Agricultural SoilMDHLMIVMAAGKSLVVSTDSRGNQVVGCNKLVTRTGVQQPATKPKRQQLFFTHAAPLEK*
Ga0070663_10214730213300005455Corn RhizosphereMQESSGELFKKQFDRIGNRMDHLMIVMAAGKTLIVSSDARGTEVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK*
Ga0070681_1002435823300005458Corn RhizosphereMSLRLLRGLVIVMKSSQELIKKQFDRIGNRMDHLMIVMAAGKTLIVSSDARGNEVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK*
Ga0070681_1158527413300005458Corn RhizosphereMDHLMIVTAAGKSLVVSSDERGNQIVGCKKLVTRTGVQQPATKPKRLQLYFTHATPLEK*
Ga0070681_1181456323300005458Corn RhizosphereMDHLMIVMAAGKSLIVSIDERGNQVVGCKKLVTRTGVQQPAT
Ga0070685_1003775723300005466Switchgrass RhizosphereMDHLMIVMAAGKTLIVSSDGRGTEIVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK*
Ga0070731_1013656723300005538Surface SoilMDHLMIVMAAGKTLIVSSDSRGKQVVGCQKLVTRTGAQQAAARPKRQQLFLTHAGPTEK*
Ga0068855_10004505843300005563Corn RhizosphereMDHLMIVMAAGKTLIVSSDARGNEVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK*
Ga0068855_10032072623300005563Corn RhizosphereMQESSGELFKKQFDRIGNRMDHLMIVMAAGKTLIVSSDDRGTQVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK*
Ga0068854_10171879523300005578Corn RhizosphereIGNRMDHLMIVMAAGKTLIVSSDGKGNEVVGCTKLVTRTGVQQPATKPKRQQLFFTHATPLEK*
Ga0066652_10024659023300006046SoilMIVMAAGKTLIVSSDSRGKQVVSCQKLVTRTGVQQPAARPKRQQLFLTVAGPLEK*
Ga0097621_10049360223300006237Miscanthus RhizosphereMDHLMIVMAAGKSLVVSSDDRGTQIVGCKKLVTRTGVQQPATKPKRQQLYFTHATPTAK*
Ga0079222_1185846813300006755Agricultural SoilEFVVLVTKKQFDRTGNRMDHLMIVMVAGKSLIVSTDSRGNHVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK*
Ga0079221_1146953213300006804Agricultural SoilMDHLTIVMAAGKTLIVSINGRDNEVVGYKKLVTRTAVQQPTTKPKGQQL
Ga0105240_1005794953300009093Corn RhizosphereFARSCVLFLKKQIDRIGNRMDHLMIVMAAGKSLIVSSNSRGNEIVGCKRLVTRTGVQQPATKPKRQQFFFTHAAPLEK*
Ga0105240_1051915823300009093Corn RhizosphereMDHLMIVMAAGKTLIVSSDARGTEVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK*
Ga0105240_1235166723300009093Corn RhizosphereKKQFDRIGNRMDHLMIVMAAGKTLIVSSDVRGTEDVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK*
Ga0105241_1063880213300009174Corn RhizosphereRNIRPSIVFQESSRELFKKQFDRIGNRMDHLMIVMAAGKTLIVSSDARGTEVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK*
Ga0105238_1145924323300009551Corn RhizosphereMSLQVPQCLVIVLEDFWQKQFDRIGNRMDHLMIVMAAGKTLIVSSDGRGNEVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK*
Ga0105238_1229052313300009551Corn RhizosphereMDHLMIVMAAGKTLIVSSDVRGTEVVGCKKLVTRTGVQQ
Ga0126373_1149911823300010048Tropical Forest SoilMDHLTIVMAAGKTLIVSSDSRGKQIVGCQKLVTRTGVQQPVARPRRQQLFLTLAAPLEK*
Ga0126373_1303260813300010048Tropical Forest SoilLRPIAPTDYSVKRKFDRIGNRMDHLMIVMAAGKTLIVSSDGRGKHVVGCQKLVTRTGALQVAARPKRQQLYLTHAGPHEK*
Ga0126376_1026132323300010359Tropical Forest SoilMDHLMIVMAAGKTLIVSSDRRGKQVVGCQKLVTRTGAQQAAARPKRQQLYLTHAGPTEK*
Ga0134125_1006152723300010371Terrestrial SoilMDHLTIVMAAGKTLIVSSDERGNAVVGCKKLVTRTGVQQPATRPKRQQLFFTHAAPLEK*
Ga0134125_1076451023300010371Terrestrial SoilMDHLMIVMAAGKTLIVSSDAQGNEVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK*
Ga0134125_1144606523300010371Terrestrial SoilVMAAGKTLIVSSDSRGQEVVGCKKLVTRTGVQQPATKPKRQQLYFTHAAPLEK*
Ga0134128_10004304153300010373Terrestrial SoilMDHLTIVMAAGKSLVVSGDSRGNQVVGCKKIVTRTGVQQPTTKPRRQQLFFTHAAPLEK*
Ga0134128_1007024723300010373Terrestrial SoilMDHLMIVMAAGKTLVVSSDARGNEVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK*
Ga0134128_1170363113300010373Terrestrial SoilQELLKKQFDRIGNRMDHLMIVMAAGKTLIVSSDARGNEVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK*
Ga0134126_1132409413300010396Terrestrial SoilPQRRLVIVVAQSSQELFKKQFDRIGNRMDHLMIVMAAGKTLVVSSDARGNEVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK*
Ga0134126_1290438823300010396Terrestrial SoilVQEEFVVLVTKKQFDRTGNRMDHLMIVMVAGKSLIVSTDSRGNHVVGCRKLVTRTGVQQPDIKPKRQQLFFTHAAPLEK*
Ga0126383_1313707523300010398Tropical Forest SoilMDHLMIVMAAGKTLIVSSDSRGKQVVGCQKLVTRTGAQQAAARPKRQQLFFTHAGPQEK*
Ga0134127_1358067513300010399Terrestrial SoilLQPQRRLVIVVAQSSQELFKKQFDRIGNRMDHLMIVMAAGKTLVVSSDARGNEVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK*
Ga0150985_10882721023300012212Avena Fatua RhizosphereKKQFDRIGNRMDHLMIVMAAGKTLVVSSDDRGTEVVGCKKLVTRTAVQQPATKPKRQQLYFTHATPLEK*
Ga0150984_10995434423300012469Avena Fatua RhizosphereMDHLMIVMAAGKTLVVSSDDRGTEVVGCKKLVTRTAVQQPATKPKRQQLYFTHATPLEK*
Ga0150984_11141628613300012469Avena Fatua RhizosphereIGNRMDHLMIVMAAGKSLIVSSNERGNEVVGCKKLVTRTGVQQPATKPKRQQLYFTHAAPLEK*
Ga0150984_11471375613300012469Avena Fatua RhizosphereKKQIDRTGNRMDHLMIVMAAGKSLIVSSDDRGNQVVGCKKLVTRTGVQQPATKPKRQQLYFTHAAPLEK*
Ga0150984_11536257413300012469Avena Fatua RhizosphereMDHLMIVMAAGKSLVVSSDDRGNQIVGCKKLVTRTGVQQPATKPKRQQLYFTHATPTAK*
Ga0137413_1117522413300012924Vadose Zone SoilLIIVLEKKQIDRIGNRMDHLMIVIAAGKTLIVSSDSRGNQVVGCKKLVTRTGVQQPATKPKRLQLFFTHAAPLEK*
Ga0137404_1001651623300012929Vadose Zone SoilMDHLMIVMAAGKTLIVSSDSRGNQVVGCKKLVTRTGVQQPATKPKRQQLYFTHAAPLEK*
Ga0157373_1082861823300013100Corn RhizosphereMQESSGELFKKQFDRIGNRMDHLMIVMAAGKTLVVSSDARGNEVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK*
Ga0157370_1007533933300013104Corn RhizosphereMDHLMIVMVAGKSLIVSTDSRGNHVVGCRKLVTRTGVQQPDIKPKRQQLFFTHAAPLEK*
Ga0157374_1020021033300013296Miscanthus RhizosphereMQESSRELFKKQFDRIGNRMDHLMIVMAAGKTLIVSSDDRGTEVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK*
Ga0157374_1099964623300013296Miscanthus RhizosphereMDHLMIVMAAGKTLIVSSDGRGTEVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK*
Ga0157374_1263166413300013296Miscanthus RhizosphereMDHLMIVMAAGKSLVVSSDERGNQIVGCKKLVTRTGVQQQATRPKRQQLYFTHATPLEK*
Ga0157375_1069750023300013308Miscanthus RhizosphereSRELRKKQFDRIGNRMDHLMIVMAAGKTLIVSSDGRGTEIVGCKKLVTRTGVQQPATKPKRQQLYFTHATPL*
Ga0157379_1176549413300014968Switchgrass RhizosphereMDHLMIVMAAGKSLIVSSDDRGNQVVGCKKLVTRTGVQQ
Ga0132255_10415577523300015374Arabidopsis RhizosphereMDHLMIVMAAGKSLVVSSDERGNQIVGCKKLVTRTGVQQPATRPKRQQLYFTHATPLEK*
Ga0193727_110073813300019886SoilMDHLMIVMAAGKTLIVSSDSRGNQVVGCKKLVTRTGVQQPATKPKRQQLYFTHAAPLEK
Ga0193727_117855813300019886SoilMDHLMIVMAAGKSLIVSSDDRGNQVVGCKKLVTRTGVQQPATKPKRQQ
Ga0193728_103042523300019890SoilMCLKKQIDRIGNRMDHLMIVMAAGKTLIVSSDSRGNQVVGCRKLVTRTGVQQPATKPKRQQLYFTHAAPLEK
Ga0193726_101202023300020021SoilMDHLMIVMAAGKSLIVSSDDRGNQVVGCKKLVTRTGVQQPATKPKRQQLYFTHAAPLEK
Ga0179592_1032824923300020199Vadose Zone SoilMDHLMIVMAAGKTLIVSSDSRGNQVVGCKKLVTRTGVQQP
Ga0126371_1045507923300021560Tropical Forest SoilMDHLTIVMAAGKTLIVSSDSRGKQIVGCQKLVTRTGVQQPVARPRRQQLFLTLAAPLEK
Ga0126371_1090100423300021560Tropical Forest SoilMDHLIIVMAAGKSLVVSGDSRGNQVVGCKKLVTRTGVQQPATKPRRQQLFFTHAAPLEK
Ga0207705_1148792713300025909Corn RhizosphereDHLMIVMAAGKSLIVSSNSRGNEIVGCKRLVTRTGVQQPATKPKRQQFFFTHAAPLEK
Ga0207707_1005925733300025912Corn RhizosphereMDHLMIVMAAGKTLIVSSDSRGQEVVGCKKLVTRTGVQQPATKPKRQQLYFTHAAPLEK
Ga0207707_1011055133300025912Corn RhizosphereMSLRLLRGLVIVMKSSQELIKKQFDRIGNRMDHLMIVMAAGKTLIVSSDARGNEVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK
Ga0207695_1002746633300025913Corn RhizosphereMDHLMIVMAAGKSLIVSSNSRGNEIVGCKRLVTRTGVQQPATKPKRQQFFFTHAAPLEK
Ga0207693_1100184523300025915Corn, Switchgrass And Miscanthus RhizosphereMDHLMIVMAAGKSLIVSSNSRGNEIVGCKKLVTRTGVQQPATKPKRQQFFFTHAAPLEK
Ga0207660_1071801713300025917Corn RhizosphereIPCRCVRTAGLSLSFESSQELLKKQFDRIGNRMDHLMIVMAAGKTLIVSSDARGNEVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK
Ga0207694_1001934143300025924Corn RhizosphereMQESSGELFKKQFDRIGNRMDHLMIVMAAGKTLIVSSDDRGTQVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK
Ga0207694_1130530613300025924Corn RhizosphereMSLQVPQCLVIVLEDFWQKQFDRIGNRMDHLMIVMAAGKTLIVSSDSRGIEVVGCKKLVTRTGVQQPATKPKRQQLYFTHA
Ga0207694_1153885223300025924Corn RhizosphereSLQSSQELLKKQFDRIGNRMDHLMIVMAAGKTLVVSSDARGNEVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK
Ga0207664_1004083623300025929Agricultural SoilMDHLMIVMAAGKSLVVSTDSRGNQVVGCNKLVTRTGVQQPATKPKRQQLFFTHAAPLEK
Ga0207667_1006966833300025949Corn RhizosphereMDHLMIVMAAGKTLIVSSDARGNEVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK
Ga0207640_1135766423300025981Corn RhizosphereMDHLMIVMAAGKTLIVSSDGKGNEVVGCTKLVTRTGVQQPATKPKRQQLFFTHATPLEK
Ga0207674_1116649113300026116Corn RhizosphereMDHLMIVMAAGKTLIVSSDDRGTQVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK
Ga0207674_1120667323300026116Corn RhizosphereLKKQFDRIGNRMDHLMIVMAAGKTLVVSSDARGNEVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK
Ga0209579_1001150223300027869Surface SoilMIVMAAGKTLIVSSDSRGKQVVGCQKLVTRTGAQQAAARPKRQQLFLTHAGPTEK
Ga0137415_1060785323300028536Vadose Zone SoilLIIVLEKKQIDRIGNRMDHLMIVIAAGKTLIVSSDSRGNQVVGCKKLVTRTGVQQPATKPKRLQLFFTHAAPLEK
Ga0265319_126084023300028563RhizosphereMDHLTIVMAAGKSLIVSNDERGIEVVGCKKLVTRTGVQQAATKPKRQQLYFTHAAPLEK
Ga0265334_1001094833300028573RhizosphereMDHLMIVMAAGKSLIISSDKRGVEVVGCKKLVTRTGVQQAATRPKRQLLYFTHAAPLEK
Ga0265338_1002809423300028800RhizosphereMDHLMIVMAAGKTLIVSSDSRGNEVVGCKKLVTRTGVQQPATKPKRQQLYFTHAAPLEK
Ga0265338_1071831723300028800RhizosphereMDHLNIVMAAGKSLIVSTDERGIEVVGCKKLVTRTGVQQAAAKPKR
Ga0265338_1090191413300028800RhizosphereQFDRIGNRMDHLTIVMAAGKSLIVSNDERGIEVVGCKKLVTRTGVQQAATKPKRQQLYFTHAAPLEK
Ga0307511_1013932223300030521EctomycorrhizaMCLKKQIDRTGNRMDHLMIVMAAGKTLIVSSDSRGNQVVGCRKLVTRTGVQQPATKPKRQQLYFTHAAPLEK
Ga0170834_10446009323300031057Forest SoilAAGKTFIVSSDSRGKQVVGCQKLVTRTGVQQAAARPKRQQLFLSLAGPLEK
Ga0102767_1106428823300031064SoilDHLTIVMAAGKTLIISSDARGNEVVGCKKLVTRTGAQQQATKPKRQQLYFTHAAPLEK
Ga0170823_1117509123300031128Forest SoilAGKTFIVSSDSRGKQVVGCQKLVTRTGVQQAAARPKRQQLFLSLAGPLEK
Ga0170824_11508906323300031231Forest SoilMDHLMIVMAAGKTLIVSSDGRGSQVVGCKKLVTRTGVQQPAAKPRRQQLFLTHAAPLEK
Ga0170824_12887557223300031231Forest SoilDHLMIVMAAGKTLIVSSDGRGKQVVGCQKLVTRTGAQQAAARPKRQQLFLTHAGPQEK
Ga0302323_10023936513300031232FenKTLIVSSGRRGPEVIGCHKLATRTAVEQPTTRPKRQQLYFTHATPLEK
Ga0170820_1595176813300031446Forest SoilMDHLMIVMAAGKSLVVSSDERGNQIVGCKKLVTRTGVQQPATKPKRLQLYFTHATPLEK
Ga0170818_10464363813300031474Forest SoilMDHLTIVMAAGKTLIISSDGRDNEVVGCKKLVTRTSAQQPATKPKRQQLYFTHAAPLEK
Ga0170818_10468792223300031474Forest SoilSQKQIDRTGNRMDHLMIVMAAGKSLVVSSDERGNQIVGCKKLVTRTGVQQPATKPKRLQLYFTHATPLEK
Ga0310686_11968039323300031708SoilMDHLIIVMAAGKTLIVSSGSRGQQVVGCQKLVTRTGAQQAAAWPKRQQLFLTHHAGPLEK
Ga0302321_10072666423300031726FenMDHLTIVMAAGKTLIVSSGRRGPEVIGCHKLATRTAVEQPTTRPKRQQLYFTHATPLEK
Ga0307475_1070448523300031754Hardwood Forest SoilRKFDRIANRMDHLMIVMAAGKTLIVSSDSRGSQVVGCHKLVTRTGVQQTAARPKRQQLFLTLAGPLEK
Ga0307475_1079665723300031754Hardwood Forest SoilMDHLMIVMAAGKTLIVSSDGRGNEVVACKKLVTRTGVQQPATKPKRQQLFFTHAAPLEK
Ga0310909_1087877413300031947SoilMDHLMIVMAAGKTLIVSSDRQGKRIVGCQKLATRTGVQQAAARPKRQQLFLTHAGPHEK
Ga0307479_1036659923300031962Hardwood Forest SoilMDHLMIVMAAGKTLIVSSDSRGSQIVGCHKLVTRTGVQQTAARPKRQQLFLTLAGPLEK
Ga0348332_1326048623300032515Plant LitterGNRMDHLIIVMAAGKTLIVSSGSRGQQVVGCQKLVTRTGAQQAAAWPKRQQLFLTHHAGPLEK
Ga0335085_1000143253300032770SoilMDHLTIVMAAGKTLIVSSDERGKEVVGCKKLVTRTGVQQPATKPKRQQLFFTHAAPLEK
Ga0335069_1242308023300032893SoilMDHLMIVMAAGKTLIVSSDGRGNQVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLKK
Ga0310811_1001283443300033475SoilMKSSQELIKKQFDRIGNRMDHLMIVMAAGKTLIVSSDARGNEVVGCKKLVTRTGVQQPATKPKRQQLYFTHATPLEK
Ga0310811_1032181023300033475SoilMDHLMIVMAAGKTLIVSSDERGQEVVGCKKLVTRTGVQQPVTKPKRQQLFFTHAAPLEK

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.