Metagenome / Metatranscriptome Family F099499

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F099499
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	49 residues
Representative Sequence	MSLITILMFLAIAASVCLVVHVLKRDKVPLWVAVALLCLIELLRTLPLGRY
Number of Associated Samples	76
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.82 %
% of genes near scaffold ends (potentially truncated)	35.92 %
% of genes from short scaffolds (< 2000 bps)	87.38 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (68.932 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (24.272 % of family members)
Environment Ontology (ENVO)	Unclassified (36.893 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (33.981 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 72.55% β-sheet: 0.00% Coil/Unstructured: 27.45%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF11295	DUF3096	28.16
PF05239	PRC	5.83
PF04972	BON	3.88
PF00582	Usp	2.91
PF00912	Transgly	2.91
PF11752	DUF3309	2.91
PF01594	AI-2E_transport	1.94
PF03703	bPH_2	1.94
PF03992	ABM	1.94
PF06727	DUF1207	0.97
PF05532	CsbD	0.97
PF07813	LTXXQ	0.97
PF01988	VIT1	0.97
PF00575	S1	0.97
PF11821	ActD	0.97
PF01566	Nramp	0.97
PF00115	COX1	0.97
PF00903	Glyoxalase	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	3.88
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	2.91
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	2.91
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	2.91
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	1.94
COG3402	Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	1.94
COG3428	Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	1.94
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.97
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.97
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.97
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.93 %
Unclassified	root	N/A	31.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.93 %
Unclassified	root	N/A	31.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.93 %
Unclassified	root	N/A	31.07 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.98 %
Unclassified	root	N/A	31.07 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	23.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.07 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	22.33 %
Zetaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria	7.77 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.33 %
unclassified Zetaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria	7.77 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.94 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.33 %
Zetaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	7.77 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	1.94 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.33 %
Zetaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	7.77 %
Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36	1.94 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.97 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908038\|B3_all_c_ConsensusfromContig126607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1008	Open in IMG/M
3300002121\|C687J26615_10021819	All Organisms → cellular organisms → Bacteria → Proteobacteria	1572	Open in IMG/M
3300004282\|Ga0066599_100146754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	1206	Open in IMG/M
3300004481\|Ga0069718_16079902	Not Available	1490	Open in IMG/M
3300006224\|Ga0079037_100427911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36	1258	Open in IMG/M
3300006930\|Ga0079303_10192714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	813	Open in IMG/M
3300009037\|Ga0105093_10688453	Not Available	586	Open in IMG/M
3300009053\|Ga0105095_10233069	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300009081\|Ga0105098_10800345	Not Available	509	Open in IMG/M
3300009091\|Ga0102851_10415622	All Organisms → cellular organisms → Bacteria → Proteobacteria	1358	Open in IMG/M
3300009111\|Ga0115026_10580407	All Organisms → cellular organisms → Bacteria → Proteobacteria	847	Open in IMG/M
3300009111\|Ga0115026_11718239	Not Available	529	Open in IMG/M
3300009146\|Ga0105091_10137401	All Organisms → cellular organisms → Bacteria → Proteobacteria	1140	Open in IMG/M
3300009153\|Ga0105094_10503604	Not Available	704	Open in IMG/M
3300009166\|Ga0105100_10633341	Not Available	657	Open in IMG/M
3300009168\|Ga0105104_10521174	Not Available	670	Open in IMG/M
3300009171\|Ga0105101_10613471	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300009179\|Ga0115028_10122843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	1519	Open in IMG/M
3300009518\|Ga0116128_1162308	Not Available	636	Open in IMG/M
3300009548\|Ga0116107_1151050	Not Available	640	Open in IMG/M
3300009549\|Ga0116137_1002180	All Organisms → cellular organisms → Bacteria → Proteobacteria	11860	Open in IMG/M
3300009839\|Ga0116223_10603904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300010131\|Ga0115594_1075888	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300010138\|Ga0115595_1223380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300010144\|Ga0115593_1189161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300011340\|Ga0151652_13607499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	1058	Open in IMG/M
3300011391\|Ga0137331_1037609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300011436\|Ga0137458_1046706	Not Available	1153	Open in IMG/M
3300012931\|Ga0153915_10119922	All Organisms → cellular organisms → Bacteria → Proteobacteria	2819	Open in IMG/M
3300013046\|Ga0079038_138420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300014306\|Ga0075346_1102532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300014490\|Ga0182010_10644033	Not Available	594	Open in IMG/M
3300014496\|Ga0182011_10929792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300014498\|Ga0182019_10202448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1285	Open in IMG/M
3300014502\|Ga0182021_11580433	Not Available	790	Open in IMG/M
3300014502\|Ga0182021_11668153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300014502\|Ga0182021_11821539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300014839\|Ga0182027_10446055	All Organisms → cellular organisms → Bacteria → Proteobacteria	1426	Open in IMG/M
3300014839\|Ga0182027_10568385	Not Available	1225	Open in IMG/M
3300014839\|Ga0182027_12095489	Not Available	539	Open in IMG/M
3300014877\|Ga0180074_1135267	Not Available	552	Open in IMG/M
3300014883\|Ga0180086_1047884	All Organisms → cellular organisms → Bacteria → Proteobacteria	1024	Open in IMG/M
3300014885\|Ga0180063_1010261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2503	Open in IMG/M
3300015259\|Ga0180085_1131811	All Organisms → cellular organisms → Bacteria → Proteobacteria	746	Open in IMG/M
3300017929\|Ga0187849_1007328	All Organisms → cellular organisms → Bacteria	8093	Open in IMG/M
3300018005\|Ga0187878_1234349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36	673	Open in IMG/M
3300018005\|Ga0187878_1324208	Not Available	547	Open in IMG/M
3300018055\|Ga0184616_10416524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300018059\|Ga0184615_10037035	All Organisms → cellular organisms → Bacteria	2708	Open in IMG/M
3300018068\|Ga0184636_1175097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300018070\|Ga0184631_10468262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300019248\|Ga0180117_1164466	All Organisms → cellular organisms → Bacteria → Proteobacteria	1557	Open in IMG/M
3300019785\|Ga0182022_1070140	All Organisms → cellular organisms → Bacteria	1985	Open in IMG/M
3300020063\|Ga0180118_1316894	All Organisms → cellular organisms → Bacteria → Proteobacteria	1439	Open in IMG/M
3300020067\|Ga0180109_1159499	Not Available	1320	Open in IMG/M
3300020068\|Ga0184649_1358020	Not Available	562	Open in IMG/M
3300022185\|Ga0079039_1026757	Not Available	542	Open in IMG/M
3300022185\|Ga0079039_1426610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	1111	Open in IMG/M
3300022185\|Ga0079039_1434945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300022185\|Ga0079039_1483604	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300022185\|Ga0079039_1655214	Not Available	532	Open in IMG/M
3300025160\|Ga0209109_10001128	All Organisms → cellular organisms → Bacteria → Proteobacteria	14643	Open in IMG/M
3300025167\|Ga0209642_10465963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300025443\|Ga0208081_1005864	All Organisms → cellular organisms → Bacteria → Proteobacteria	2419	Open in IMG/M
3300025499\|Ga0207931_1043201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	923	Open in IMG/M
3300027871\|Ga0209397_10256720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	824	Open in IMG/M
3300027890\|Ga0209496_10190418	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300027896\|Ga0209777_10184765	Not Available	1689	Open in IMG/M
3300027902\|Ga0209048_10901041	Not Available	571	Open in IMG/M
3300031707\|Ga0315291_10452013	Not Available	1206	Open in IMG/M
3300031949\|Ga0214473_10015465	All Organisms → cellular organisms → Bacteria → Proteobacteria	8934	Open in IMG/M
3300031949\|Ga0214473_11205632	Not Available	783	Open in IMG/M
3300032829\|Ga0335070_12029082	Not Available	517	Open in IMG/M
3300033408\|Ga0316605_11915052	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300033413\|Ga0316603_12292329	Not Available	509	Open in IMG/M
3300033414\|Ga0316619_10101651	All Organisms → cellular organisms → Bacteria → Proteobacteria	1843	Open in IMG/M
3300033416\|Ga0316622_100118664	All Organisms → cellular organisms → Bacteria → Proteobacteria	2695	Open in IMG/M
3300033416\|Ga0316622_100646922	All Organisms → cellular organisms → Bacteria → Proteobacteria	1219	Open in IMG/M
3300033418\|Ga0316625_100818405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300033418\|Ga0316625_100945842	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300033433\|Ga0326726_10083423	All Organisms → cellular organisms → Bacteria → Proteobacteria	2836	Open in IMG/M
3300033433\|Ga0326726_10352305	All Organisms → cellular organisms → Bacteria → Proteobacteria	1390	Open in IMG/M
3300033433\|Ga0326726_11054353	Not Available	790	Open in IMG/M
3300033433\|Ga0326726_11549503	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300033433\|Ga0326726_12116287	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300033480\|Ga0316620_10071423	All Organisms → cellular organisms → Bacteria → Proteobacteria	2493	Open in IMG/M
3300033480\|Ga0316620_11017109	Not Available	806	Open in IMG/M
3300033480\|Ga0316620_11571939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300033482\|Ga0316627_100799903	Not Available	891	Open in IMG/M
3300033482\|Ga0316627_101216776	Not Available	746	Open in IMG/M
3300033485\|Ga0316626_10225064	All Organisms → cellular organisms → Bacteria → Proteobacteria	1489	Open in IMG/M
3300033485\|Ga0316626_10855130	Not Available	801	Open in IMG/M
3300033485\|Ga0316626_10982089	All Organisms → cellular organisms → Bacteria → Proteobacteria	748	Open in IMG/M
3300033485\|Ga0316626_11029310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300033486\|Ga0316624_10471315	All Organisms → cellular organisms → Bacteria → Proteobacteria	1067	Open in IMG/M
3300033486\|Ga0316624_11550644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300033488\|Ga0316621_10044928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	2169	Open in IMG/M
3300033488\|Ga0316621_10414574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria → unclassified Zetaproteobacteria → Zetaproteobacteria bacterium	921	Open in IMG/M
3300033513\|Ga0316628_100383888	All Organisms → cellular organisms → Bacteria	1780	Open in IMG/M
3300033513\|Ga0316628_100673573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1355	Open in IMG/M
3300033513\|Ga0316628_100941726	Not Available	1144	Open in IMG/M
3300033557\|Ga0316617_101063392	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300033755\|Ga0371489_0012453	All Organisms → cellular organisms → Bacteria	7620	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.49%
Aquatic	Environmental → Aquatic	49.51%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.69%
Freshwater	Environmental → Aquatic → Freshwater	39.81%
Sediment	Environmental → Aquatic → Sediment	9.71%
Peat	Environmental → Terrestrial → Peat	5.83%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.97%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	34.95%
Sediment	Environmental → Aquatic → Freshwater → Sediment	20.39%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	6.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.83%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.94%
Loam	Environmental → Terrestrial → Soil → Loam	1.94%
Lake	Environmental → Aquatic → Freshwater → Lake	0.97%
Pond	Environmental → Aquatic → Freshwater → Pond	0.97%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	25.24%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	20.39%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	11.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.71%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	9.71%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.91%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.94%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.94%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.97%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.97%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.97%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	24.27%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	9.71%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	7.77%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	7.77%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	7.77%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.83%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	5.83%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.91%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.91%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.94%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.97%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.97%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.97%
Wetland	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland	0.97%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.97%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.97%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.97%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.97%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908038	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
3300002121	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_11_14_A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010138	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_11_14_B (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010144	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_11_14_C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011340	Combined Assembly of Wetland Metatranscriptomes	Environmental	Open in IMG/M
3300011391	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT163_2	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300013046	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300014306	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D1	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014877	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT366_16_10D	Environmental	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018068	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2	Environmental	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300019248	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_2_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019785	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020067	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020068	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022185	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025167	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)	Environmental	Open in IMG/M
3300025443	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025499	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B3_all_c_02112620	2124908038	Soil	MSIITILMFLAIAASVCLVVHVLKRDKVPLWVAVALLCVIELLRTLPLGRF
C687J26615_100218192	3300002121	Soil	MSIITLLMFLAIAASVCLVVHVLQRDKVPLWVAVALLCLIELLRTLPLGRY*
Ga0066599_1001467541	3300004282	Freshwater	MSIITILLLLAIAASVCLVGHVLRRDAFPLWVPVALLCLIDLLRTLPLGRY*
Ga0069718_160799023	3300004481	Sediment	MSLITILMFLAIAASVCLVVHVLTRDKVPLWVAVALLCVIELLRTLPLGRY*
Ga0079037_1004279113	3300006224	Freshwater Wetlands	MSLITILMFLAIAASVCLVVHVLKRDKVPLWVAVALLCLIELLRTLPLGRY*
Ga0079303_101927142	3300006930	Deep Subsurface	MSIITILLLLAIAASVCLVGHVLRRDAFPLWVPVALLCLIELLRTLPLGRY*
Ga0105093_106884532	3300009037	Freshwater Sediment	MSLITILMFLAMAASVCLVVHVLTRDKVPLWVAVALLCVIELLRTLPLGRY*
Ga0105095_102330693	3300009053	Freshwater Sediment	CLVVHVLKRDKVPLWVAVALLCLIELLRTLPLGRY*
Ga0105098_108003451	3300009081	Freshwater Sediment	MSIITILMSLAIAASVCLVVHVVKRDTVPLWVAVALLCLIELLRTLPLGRH*
Ga0102851_104156223	3300009091	Freshwater Wetlands	MSIITILMFLAIAASACVVVHVLNRDKVPLWVAVALLCLIELLRT
Ga0115026_105804073	3300009111	Wetland	LAFAASVCLVVHVLKRDKVPLWVAVALLCLIELRRTLPLGRY*
Ga0115026_117182392	3300009111	Wetland	MMCLAMAASVCLVVHVLKPDRLPLWVAAALLCVIELLRTLPLGRY*
Ga0105091_101374011	3300009146	Freshwater Sediment	MSIITILMSLAIAASVCLVVHVVKRDTVPLWVAVALLCLIELLRTLPLGRY*
Ga0105094_105036043	3300009153	Freshwater Sediment	MSLITILMFLAIAASVCLVVHVLTRDKVPLWVAVALLCVIELL
Ga0105100_106333412	3300009166	Freshwater Sediment	MSLITILMFLAIAASVCLVVHVLTRDKVPLWVAVDLLCVIELLRTLPLGRY*
Ga0105104_105211742	3300009168	Freshwater Sediment	TILMFLAIAASVCLTVHVFRRDKVPLWVAVALLCLIELLRTLPLGRY*
Ga0105101_106134711	3300009171	Freshwater Sediment	REPPSLVAAGVEPRSLITIMMCLAMAASVCLVVHVRTRERVPLWVAVPLLCGMEVLGTLPLGRY*
Ga0115028_101228434	3300009179	Wetland	TTLMFLAIAASVCLVVHVLKRDLVPLWVAVALLCLIELLRTLPLGRY*
Ga0116128_11623081	3300009518	Peatland	VLAIAASVCLVVHVLQRDTVPLWVAVALLCLIELLRTLPLGRY*
Ga0116107_11510501	3300009548	Peatland	AIAASVCLVVHVLQRDTVPLWVAVALLCLIELLRTLPLGRY*
Ga0116137_100218012	3300009549	Peatland	MSIITILMVLAIAASVCLVVHVLQRDTVPLWVAVALLCLIELLRTLPLGRY*
Ga0116223_106039042	3300009839	Peatlands Soil	MSIITVLMFLAIAASVCLVIHVLQRDKVPLWVAVALLCLIELLRTLPLGRY*
Ga0115594_10758882	3300010131	Wetland	MPIITILMFLAIAASVCLVVHVLKPDRLPLWVSAALLCVIELLRTLPLGRY*
Ga0115595_12233801	3300010138	Wetland	MPIITILMFLAIAASVCLVLHVLQRDKVPLWVAVALLCLIELLRTLPLGRY*
Ga0115593_11891612	3300010144	Wetland	MSLITILMFLAIAASVCVVIHVLNRDKVPLWVAVALLCLIELLRTLPLGRY*
Ga0151652_136074992	3300011340	Wetland	MSIITILLLLAIAASVCLVGHVLRRDAYPLWVPVALLCLIELLRTLPLGRY*
Ga0137331_10376091	3300011391	Soil	MSLITILMFLAIAASVCLVVHLLKRDKVPLWVAVALLCLIELLRTLPLGRY*
Ga0137458_10467063	3300011436	Soil	MSLITILMFLAIAASVCLVIHVLTRDKVPLWVAVALLCLIELLRTLPLGRY*
Ga0153915_101199224	3300012931	Freshwater Wetlands	MSIITILLVLAIAASVCLVVHVLHRDKVPLWVAVALLCVIELLRTLPLGRY*
Ga0079038_1384202	3300013046	Freshwater Wetlands	MPIITILMFLAIAASVCLVLHVLRRDTVPLWVAVALLCLIELLRTLPLGRD*
Ga0075346_11025322	3300014306	Natural And Restored Wetlands	MSLITILMFLAIAAAVCLVVHLLTRDKVPLWVAVALLCLIELLRTLPLGRY*
Ga0182010_106440331	3300014490	Fen	MSIITILMFLAIAASVCLVVHVVKRDKVPLWVAVALLCVIELLRTLPLGRF*
Ga0182011_109297922	3300014496	Fen	MSIITILMFLAIAASVCLVVHVVKRDKVPLWVAVALLC
Ga0182019_102024483	3300014498	Fen	MSLITLLMFLAIAASVCLVVHVLKRDTVPLWVAVALLCVIELLRTLPLGRF*
Ga0182021_115804331	3300014502	Fen	RDPPSPVADGVEPMSLITILMFLAIAASVCLIVHVLKRDKVPLWVAVALLCVIELLRTLPLGRF*
Ga0182021_116681531	3300014502	Fen	MSLITLLMFLAIAASVCLVVHVLKRDTVPLWVAVALLCV
Ga0182021_118215391	3300014502	Fen	MSLITILMFLAIAASVCLIVHVLKRDTVPLWVAVALLCVIELLRTLPLGRF*
Ga0182027_104460552	3300014839	Fen	MSLITILMFLAIAASVCVVVHVLKRDKVPLWVAVALLCVIELLRTLPLGHY*
Ga0182027_105683851	3300014839	Fen	MSIITILMFLAIAASVCLVVHVVKRDKVPLWVAVALLCVIE
Ga0182027_120954893	3300014839	Fen	AIAASVCLVVHVVKRDKVPLWVAVALLCVIELLRTLPLGRF*
Ga0180074_11352671	3300014877	Soil	MSLITILMFLAIAASVCLVVHVLQRDKVPLWIAVALLCLIELLRTLPLGRY*
Ga0180086_10478843	3300014883	Soil	MSIITILMFLAIAASVCLVVHVLKRDKVPLWVAVALLCLIELLRTLPLGRY*
Ga0180063_10102612	3300014885	Soil	MSLITILMVLAIAASVCLVVHVLQRDKVPLWVAVALLCLIELLRTLPLGRY*
Ga0180085_11318112	3300015259	Soil	MSIITILMFLAIAASVCLVVHVLKRDKVPLWIAVALLCLIELLRTLPLGRY*
Ga0187849_10073287	3300017929	Peatland	MSIITILMVLAIAASVCLVVHVLQRDTVPLWVAVALLCLIELLRTLPLGRY
Ga0187878_12343491	3300018005	Peatland	AASVCLVVHVLKRDTVPLWVAVALLCLIELLRTLPLGRY
Ga0187878_13242081	3300018005	Peatland	MSLITILMFLAIAASVCVVVHVLKRDKVPLWVAVALLCVIELLRTLPLGHY
Ga0184616_104165241	3300018055	Groundwater Sediment	MSLITILMFLAIAASVCLVVHVLKRDKVPLWVAVALLCLIELLRTLPLGRY
Ga0184615_100370351	3300018059	Groundwater Sediment	MSLITILMFLAIAASVCLVVHVLQRDKVPLWVAVALLCLIELLRTLPLGRY
Ga0184636_11750971	3300018068	Groundwater Sediment	MSLITILMVLAIAASVCLVVHVLQRDKVPLWVAVALLCLIELLRTLPLGRY
Ga0184631_104682622	3300018070	Groundwater Sediment	VAEGGESLSLITILMVLAIAASVCLVVHVLQRDKVPLWVA
Ga0180117_11644661	3300019248	Groundwater Sediment	MSIITILMSLAIAASVCLVVHVVKRDTVPLWVAVALLCLIELLRTLPLGRY
Ga0182022_10701404	3300019785	Fen	MSLITILMFLAIAASVCLIVHVLKRDTVPLWVAVALLCVIELLRTLPLGRF
Ga0180118_13168943	3300020063	Groundwater Sediment	MSIITILMSLAIAASVCLVVHVVKCDTVPLWVAVALLCLIELLRTLPLGRY
Ga0180109_11594991	3300020067	Groundwater Sediment	RRRDPPSPVADEGEPMSLITILMVLAIAASVCLVVHVLQRDKVPLWVAVALLCLIELLRTLPLGRY
Ga0184649_13580201	3300020068	Groundwater Sediment	MSIITILMFLAIAASVCLVVHVLKRDKVPLWIAVALLC
Ga0079039_10267571	3300022185	Freshwater Wetlands	MSLITLLMLLAIAASVCLVVHVLKWDKVPLWVVVALLCVIELLRTLPLGRD
Ga0079039_14266101	3300022185	Freshwater Wetlands	MSLITVLMFLAIAASVCLVIHVLTRDKVPLWVAVALLCVIELLRTLPLGRY
Ga0079039_14349451	3300022185	Freshwater Wetlands	MSLITILMFLAIAASVCVVIHVLNRDKVPLWVAVALLCLIELLRTLPLGRY
Ga0079039_14836043	3300022185	Freshwater Wetlands	MSLITLLMVLAIAASVCLVLHVLQRDTVPLWVAVALLCLIELLRTLPLGRD
Ga0079039_16552142	3300022185	Freshwater Wetlands	MPIITILMFLAIAASVCLVLHVLQRDKVPLWVAVALLCLIELLRTLPLGRY
Ga0209109_1000112810	3300025160	Soil	MSIITLLMFLAIAASVCLVVHVLQRDKVPLWVAVALLCLIELLRTLPLGRY
Ga0209642_104659632	3300025167	Soil	MSIITLLMFLAIAASVCLVVHVLQRDKVPLWVAVALLCLIE
Ga0208081_10058643	3300025443	Arctic Peat Soil	MSIITILMFLAIAASVFLVVHVLKRDKVPLWVAVALLCLIELLRTLPLGRY
Ga0207931_10432012	3300025499	Arctic Peat Soil	MSIITILMFLSIAASVFLVVHVLKRDKVPLWVAVALLCLIELLRTLPLGRY
Ga0209397_102567202	3300027871	Wetland	MSIITILLLLAIAASVCLVGHVLRRDAFPLWVPVALLCLIELLRTLPLGRY
Ga0209496_101904181	3300027890	Wetland	ASVCLVVHVLKRDKVPLWVAVALLCLIELLRTLPLGRY
Ga0209777_101847652	3300027896	Freshwater Lake Sediment	MSIITILMFLAIAASVCLVVHVLQRDKVPLWVAVALLCLIELLRTLPLGRY
Ga0209048_109010411	3300027902	Freshwater Lake Sediment	MSLITILMFLAIAASVCLVVHLLTRDKVPLWVAVALLCLIELLRTLPSAARA
Ga0315291_104520132	3300031707	Sediment	MITIPMLLAVAASVCLVVHVLRRDKVPLWVAVALLCAIELLRTVPLGRY
Ga0214473_100154654	3300031949	Soil	MSIITILMFLAIAASGCLVVHVLKRDKVPLWVAVALLCLIELLRTLPLGRY
Ga0214473_112056322	3300031949	Soil	ADEGEPMSLITILMVLAIAASVCLVVHVLQRDKVPLWVAVALLCLIELLRTLPLGRY
Ga0335070_120290821	3300032829	Soil	MSLITILMFLAIAASVCVVVHVLNRDKLPLWVAVALLCLIELLRTLPLERY
Ga0316605_119150522	3300033408	Soil	SVCLVVHVLKRDRIPLWVAVALLCLIELLRTLPLGRY
Ga0316603_122923291	3300033413	Soil	MMCVAMAASVCLVVHVRTWERVPLWVAVPLLCGMEVLGTLPLGRY
Ga0316619_101016512	3300033414	Soil	MSLITILMFLAIVASVCLVVHVLKRDRIPLWVAVALLCLIELLRTLPLGRY
Ga0316622_1001186641	3300033416	Soil	MSLITILMFLAIAASVCLVVHVLTRDKVPLWVAVALLCLIELLRTLPLGRY
Ga0316622_1006469222	3300033416	Soil	MSIITILLVLAIAASVCLVVHVLHRDKVPLWVAVALLCVIELLRTLPLGRY
Ga0316625_1008184052	3300033418	Soil	MSLITILMFLAIAASVCLVVHVLKRDKVPLWVAVALLCLIELL
Ga0316625_1009458421	3300033418	Soil	ASVCLVVHVLKRDKVPLWVAVALLCVIELLRTLPLGR
Ga0326726_100834233	3300033433	Peat Soil	MSLITILMFLAIAASVCLVVHVVKRDTVPLWVAVALLCLIELLRTLPLGRY
Ga0326726_103523053	3300033433	Peat Soil	ITILMFLAIAASVCLVLHVLKRDTVPLWVAVALLCLIELLRTLPLGRY
Ga0326726_110543533	3300033433	Peat Soil	MSLITILMFLAIAASVCLVVHLLTRDKVPLWVAVALLCLIELLRTLPLGRY
Ga0326726_115495031	3300033433	Peat Soil	TILMLLAVAASVCLVVHVLRRDKVPLWVAVALLCAIELLRTVPLGR
Ga0326726_121162871	3300033433	Peat Soil	ITILMVLAIAASVCLVVHVLRGDKVPLWVAVALLCVIELLRTLPLGRY
Ga0316620_100714233	3300033480	Soil	MSLMTILMFLAIAACVCLVVHVLKPDKVPLWVAVALLCLIELLRTLPLGRY
Ga0316620_110171092	3300033480	Soil	PSVPVVAGVEPMSLITLLMVLAIAASVCLVLHVLKRDQVPLWVAVALLCLIELLRTLPLGRY
Ga0316620_115719392	3300033480	Soil	MSLITILMFLAIAASVCLIVHVLKRDKVPLWVAVALLCLIELLRT
Ga0316627_1007999031	3300033482	Soil	VEPRSLITIMMCVAMAASVCLVVHVRTRERVPLWVAVPLLCGMEVLGTLPLGRY
Ga0316627_1012167762	3300033482	Soil	MSIITILMFLAIAASVCLVVHVLTRDKVPLWVAVALLCLIELLRTLPLGRY
Ga0316626_102250643	3300033485	Soil	AASVCLVVHVLTRDKVPLWVAVALLCLIELLRTLPLGRY
Ga0316626_108551303	3300033485	Soil	MSLITILMFLAIAASVCLVVHVLKPDRLPLWVAAALLCVIELLRTLPLGRF
Ga0316626_109820892	3300033485	Soil	MMCVAMAASVCLVVHVRTRERVPLWVAVPLLCGMEVLGTLPLGRY
Ga0316626_110293101	3300033485	Soil	VAEGGEPISLITLLMVLAIAASVCLVLHVLQRDTVPLWVAVALLCLIE
Ga0316624_104713152	3300033486	Soil	MSLITLLMVLAIAASVCLVLHVLKRDQVPLWVAVALLCLIELLRTLPLGRY
Ga0316624_115506441	3300033486	Soil	MSLITILMFLAIAASVCLVVHVLKPDKVPLWVAVALLCLIELLRTLPLGRY
Ga0316621_100449283	3300033488	Soil	MSLITILMFLAIVASVCLVVHVLKRDRIPLWVAVALLCLIELRRTLPLGRY
Ga0316621_104145743	3300033488	Soil	MSIITILLLLAIAASVCLVGHVLRRDAFPLWVPVALLC
Ga0316628_1003838883	3300033513	Soil	MSLITILMFLAIAASVCVVVHVLKPDKVPLWVAVALLCLIELLRTLPLGRY
Ga0316628_1006735731	3300033513	Soil	DPPAPVADGVEPMSIITILMVLAIAASVCLVVHVLKRDKVPLWVAVALLCLIELLRTLPLGRF
Ga0316628_1009417262	3300033513	Soil	MSIITILMFLAIAASVCLVLHVLKRDKVPLWVAVALLCLIELLRTLPLGRY
Ga0316617_1010633921	3300033557	Soil	RRCVSPSPVADGVKPMSLITILMFLAIVASVCLVVHVLKRDRIPLWVAVALLCLIELLRTLPLGRY
Ga0371489_0012453_444_578	3300033755	Peat Soil	MLLAIAASACLVVHVLKPKKVPLWVAVAIVCVIELLRTVPLGRY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099499

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences