NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F099590

Metagenome / Metatranscriptome Family F099590

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F099590
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 53 residues
Representative Sequence ETLKDQLCKAGKCPTYTVFKDHSHISEVMSPDTADDSVTGPILKWMKSVK
Number of Associated Samples 90
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 95.15 %
% of genes from short scaffolds (< 2000 bps) 93.20 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction Yes
3D model pTM-score0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (84.466 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(8.738 % of family members)
Environment Ontology (ENVO) Unclassified
(24.272 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.718 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 20.51%    β-sheet: 0.00%    Coil/Unstructured: 79.49%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF01436NHL 5.83
PF00903Glyoxalase 5.83
PF01738DLH 4.85
PF09363XFP_C 4.85
PF01019G_glu_transpept 2.91
PF08240ADH_N 2.91
PF02567PhzC-PhzF 1.94
PF06325PrmA 1.94
PF00753Lactamase_B 1.94
PF04014MazE_antitoxin 1.94
PF00188CAP 0.97
PF05995CDO_I 0.97
PF05193Peptidase_M16_C 0.97
PF01975SurE 0.97
PF13485Peptidase_MA_2 0.97
PF02775TPP_enzyme_C 0.97
PF14066DUF4256 0.97
PF00174Oxidored_molyb 0.97
PF00135COesterase 0.97
PF13302Acetyltransf_3 0.97
PF11737DUF3300 0.97
PF02371Transposase_20 0.97
PF13360PQQ_2 0.97
PF08308PEGA 0.97
PF03476MOSC_N 0.97
PF00890FAD_binding_2 0.97
PF00355Rieske 0.97
PF01850PIN 0.97
PF13614AAA_31 0.97
PF00076RRM_1 0.97
PF01479S4 0.97
PF01261AP_endonuc_2 0.97
PF12681Glyoxalase_2 0.97
PF07853DUF1648 0.97
PF00437T2SSE 0.97
PF00999Na_H_Exchanger 0.97
PF12704MacB_PCD 0.97
PF07883Cupin_2 0.97
PF13577SnoaL_4 0.97
PF12867DinB_2 0.97
PF13365Trypsin_2 0.97
PF030614HBT 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG0405Gamma-glutamyltranspeptidaseAmino acid transport and metabolism [E] 2.91
COG3897Protein N-terminal and lysine N-methylase, NNT1/EFM7 familyPosttranslational modification, protein turnover, chaperones [O] 1.94
COG0384Predicted epimerase YddE/YHI9, PhzF superfamilyGeneral function prediction only [R] 1.94
COG2264Ribosomal protein L11 methylase PrmATranslation, ribosomal structure and biogenesis [J] 1.94
COG2890Methylase of polypeptide chain release factorsTranslation, ribosomal structure and biogenesis [J] 1.94
COG3217N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domainDefense mechanisms [V] 0.97
COG3263NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domainsEnergy production and conversion [C] 0.97
COG3547TransposaseMobilome: prophages, transposons [X] 0.97
COG3915Uncharacterized conserved proteinFunction unknown [S] 0.97
COG4651Predicted Kef-type K+ transport protein, K+/H+ antiporter domainInorganic ion transport and metabolism [P] 0.97
COG5553Predicted metal-dependent enzyme of the double-stranded beta helix superfamilyGeneral function prediction only [R] 0.97
COG0025NhaP-type Na+/H+ or K+/H+ antiporterInorganic ion transport and metabolism [P] 0.97
COG0475Kef-type K+ transport system, membrane component KefBInorganic ion transport and metabolism [P] 0.97
COG0496Broad specificity polyphosphatase and 5'/3'-nucleotidase SurEReplication, recombination and repair [L] 0.97
COG2041Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductasesEnergy production and conversion [C] 0.97
COG2272Carboxylesterase type BLipid transport and metabolism [I] 0.97
COG2340Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domainCell cycle control, cell division, chromosome partitioning [D] 0.97
COG3004Na+/H+ antiporter NhaAEnergy production and conversion [C] 0.97

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms84.47 %
UnclassifiedrootN/A15.53 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000559|F14TC_104903471All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300004082|Ga0062384_100111316All Organisms → cellular organisms → Bacteria1485Open in IMG/M
3300005184|Ga0066671_10449280All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria827Open in IMG/M
3300005290|Ga0065712_10024802All Organisms → cellular organisms → Bacteria1107Open in IMG/M
3300005328|Ga0070676_11428651All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium531Open in IMG/M
3300005332|Ga0066388_105394196All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300005340|Ga0070689_100023079All Organisms → cellular organisms → Bacteria4654Open in IMG/M
3300005340|Ga0070689_100576162All Organisms → cellular organisms → Bacteria972Open in IMG/M
3300005436|Ga0070713_101929792All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300005564|Ga0070664_101147772All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium732Open in IMG/M
3300005712|Ga0070764_10919434All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300006047|Ga0075024_100244857All Organisms → cellular organisms → Bacteria858Open in IMG/M
3300006059|Ga0075017_100614024All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300006176|Ga0070765_100505231All Organisms → cellular organisms → Bacteria1136Open in IMG/M
3300006176|Ga0070765_100799541All Organisms → cellular organisms → Bacteria891Open in IMG/M
3300006237|Ga0097621_100773764All Organisms → cellular organisms → Bacteria → Proteobacteria888Open in IMG/M
3300006354|Ga0075021_11022139All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300006791|Ga0066653_10172232All Organisms → cellular organisms → Bacteria → Proteobacteria1077Open in IMG/M
3300006845|Ga0075421_100189089All Organisms → cellular organisms → Bacteria2555Open in IMG/M
3300009093|Ga0105240_12732300All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium509Open in IMG/M
3300009098|Ga0105245_10670632All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius1068Open in IMG/M
3300009100|Ga0075418_10988779All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300009100|Ga0075418_11109596All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium857Open in IMG/M
3300009101|Ga0105247_10576970All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18831Open in IMG/M
3300009101|Ga0105247_10635562Not Available796Open in IMG/M
3300009148|Ga0105243_11220110All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium766Open in IMG/M
3300009176|Ga0105242_13238779Not Available506Open in IMG/M
3300009524|Ga0116225_1081605All Organisms → cellular organisms → Bacteria1514Open in IMG/M
3300009637|Ga0116118_1064477All Organisms → cellular organisms → Bacteria1278Open in IMG/M
3300010037|Ga0126304_11212682All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium517Open in IMG/M
3300010044|Ga0126310_11299712Not Available588Open in IMG/M
3300010048|Ga0126373_13165877All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium512Open in IMG/M
3300010362|Ga0126377_13177205All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium531Open in IMG/M
3300010366|Ga0126379_10255477All Organisms → cellular organisms → Bacteria1729Open in IMG/M
3300010366|Ga0126379_11725074All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300010375|Ga0105239_10801695Not Available1079Open in IMG/M
3300010379|Ga0136449_100778944Not Available1585Open in IMG/M
3300010401|Ga0134121_11452185All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300010403|Ga0134123_13592355All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium503Open in IMG/M
3300011120|Ga0150983_10714234All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium604Open in IMG/M
3300011120|Ga0150983_11617451Not Available603Open in IMG/M
3300011403|Ga0137313_1025407All Organisms → cellular organisms → Bacteria → Acidobacteria967Open in IMG/M
3300011416|Ga0137422_1085492Not Available756Open in IMG/M
3300011425|Ga0137441_1195638All Organisms → cellular organisms → Bacteria → Acidobacteria508Open in IMG/M
3300012199|Ga0137383_10614332All Organisms → cellular organisms → Bacteria → Acidobacteria795Open in IMG/M
3300012906|Ga0157295_10423905All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium503Open in IMG/M
3300013296|Ga0157374_12105165Not Available591Open in IMG/M
3300013297|Ga0157378_11542001All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300013306|Ga0163162_11314791Not Available821Open in IMG/M
3300013306|Ga0163162_12455635All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium599Open in IMG/M
3300014501|Ga0182024_11109877All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium933Open in IMG/M
3300014654|Ga0181525_10647255All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300014654|Ga0181525_10753926All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium548Open in IMG/M
3300014968|Ga0157379_11589294Not Available638Open in IMG/M
3300015371|Ga0132258_11016612All Organisms → cellular organisms → Bacteria → Proteobacteria2095Open in IMG/M
3300015371|Ga0132258_11820850All Organisms → cellular organisms → Bacteria → Acidobacteria1534Open in IMG/M
3300015371|Ga0132258_12779461All Organisms → cellular organisms → Bacteria1219Open in IMG/M
3300015372|Ga0132256_100689778All Organisms → cellular organisms → Bacteria1137Open in IMG/M
3300015373|Ga0132257_101969323Not Available753Open in IMG/M
3300015374|Ga0132255_104579123All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300015374|Ga0132255_105790984All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300016294|Ga0182041_12205103All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium515Open in IMG/M
3300016357|Ga0182032_11002838All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium713Open in IMG/M
3300017972|Ga0187781_11379343All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300019362|Ga0173479_10734759All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300020580|Ga0210403_10855928All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis720Open in IMG/M
3300021132|Ga0214196_1024508All Organisms → cellular organisms → Bacteria853Open in IMG/M
3300021170|Ga0210400_10310324All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1296Open in IMG/M
3300021407|Ga0210383_10686751All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium880Open in IMG/M
3300021407|Ga0210383_11171070Not Available647Open in IMG/M
3300021433|Ga0210391_11539572All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3509Open in IMG/M
3300021475|Ga0210392_10051795All Organisms → cellular organisms → Bacteria2531Open in IMG/M
3300021478|Ga0210402_10546481All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1075Open in IMG/M
3300022722|Ga0242657_1221422All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300025898|Ga0207692_11007985Not Available550Open in IMG/M
3300025906|Ga0207699_10807191All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium690Open in IMG/M
3300025914|Ga0207671_10616336Not Available865Open in IMG/M
3300025917|Ga0207660_10625361All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales877Open in IMG/M
3300025928|Ga0207700_10814568All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium835Open in IMG/M
3300025934|Ga0207686_11539028Not Available549Open in IMG/M
3300026075|Ga0207708_10438882All Organisms → cellular organisms → Bacteria1085Open in IMG/M
3300026142|Ga0207698_10399789Not Available1313Open in IMG/M
3300027609|Ga0209221_1067890All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium934Open in IMG/M
3300027826|Ga0209060_10516742All Organisms → cellular organisms → Bacteria → Acidobacteria541Open in IMG/M
3300027839|Ga0209403_10363434All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium774Open in IMG/M
3300027874|Ga0209465_10615039All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300027895|Ga0209624_10065350All Organisms → cellular organisms → Bacteria2342Open in IMG/M
3300029913|Ga0311362_11125861All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium595Open in IMG/M
3300029951|Ga0311371_10781550All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1180Open in IMG/M
3300030580|Ga0311355_10602163All Organisms → cellular organisms → Bacteria1037Open in IMG/M
3300030706|Ga0310039_10028433All Organisms → cellular organisms → Bacteria2614Open in IMG/M
3300030743|Ga0265461_13945780All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300031094|Ga0308199_1044299All Organisms → cellular organisms → Bacteria → Acidobacteria850Open in IMG/M
3300031247|Ga0265340_10238223All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium812Open in IMG/M
3300031524|Ga0302320_10485380All Organisms → cellular organisms → Bacteria → Acidobacteria1505Open in IMG/M
3300031708|Ga0310686_102471107All Organisms → cellular organisms → Bacteria → Acidobacteria3213Open in IMG/M
3300031708|Ga0310686_119590680All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300031716|Ga0310813_11294896All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300031823|Ga0307478_11484591All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium561Open in IMG/M
3300031901|Ga0307406_11693559All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium560Open in IMG/M
3300031938|Ga0308175_103234357All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium505Open in IMG/M
3300031954|Ga0306926_11083839All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium948Open in IMG/M
3300032180|Ga0307471_101240566All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales909Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil8.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere5.83%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.85%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.88%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.88%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.91%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.91%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.91%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.91%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.91%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.91%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.94%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.94%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.94%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.94%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.94%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.94%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.94%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog1.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.94%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater0.97%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.97%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.97%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.97%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.97%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.97%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.97%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.97%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.97%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.97%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.97%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.97%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.97%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.97%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.97%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009637Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011403Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2EnvironmentalOpen in IMG/M
3300011416Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2EnvironmentalOpen in IMG/M
3300011425Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT244_2EnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012906Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1EnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014654Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaGEnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021132Freshwater microbial communities from Trout Bog Lake, WI - 25AUG2008 epilimnionEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300022722Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027609Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027826Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027839Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300029913III_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030580II_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030706Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)EnvironmentalOpen in IMG/M
3300030743Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assemblyEnvironmentalOpen in IMG/M
3300031094Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031247Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaGHost-AssociatedOpen in IMG/M
3300031524Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F14TC_10490347123300000559SoilLDPPNIYAFDETLKNALCNAGRCPTSAFYKDHSRVSLVFSPNTADNSVTGPILKWMKGVK
Ga0062384_10011131633300004082Bog Forest SoilISVAELDPPNIIGFAETLRDELKKANRNVTYSVYKDHSHISEVMSPNTADKSVTGRIVKWMKSVK*
Ga0066671_1044928013300005184SoilLKDQLCKAGHCPAYLVFKDHSHISEVMSPNTADDSVTGPILKWIKSVK*
Ga0065712_1002480213300005290Miscanthus RhizosphereDEALKNALCKAGRCPTSAVFKDHSHVSLVFSPNTRDDSVTGPILKWMKSIK*
Ga0070676_1142865123300005328Miscanthus RhizosphereFAETLRDELCKAGHCATYAVYKDHSHISEVMSPNTADDSVTGSILKWMKSVK*
Ga0066388_10539419623300005332Tropical Forest SoilNILSFDLALKNALCKAGRCPTTAELIKDHSHVSLVFSPNTSDDSVTGPILKWMKSVK*
Ga0070689_10002307913300005340Switchgrass RhizosphereIGFAETLRDQLCKAGRCATYVMYKDHSHISEVMSPDTADTSVTGPILKWMKGVK*
Ga0070689_10057616213300005340Switchgrass RhizosphereLCKAGRCPTSAVFKDHSHVSLVFSPNTRDDSVTGPILKWMKSIK*
Ga0070713_10192979223300005436Corn, Switchgrass And Miscanthus RhizosphereLKSELCKAGACPTYMVYKDHSHISEVLSPNTADTSVTGPILKWMKSVK*
Ga0070664_10114777223300005564Corn RhizosphereIDSANIWVFDEALKNALCKTGRCPTSAVFKDHSHVSLVFSPNTKDDSVTGPILKWMKSVK
Ga0070764_1091943413300005712SoilPNIIGFAETLRDELKKANRNVTFAVYKDHSHISEVMSPDTADQSVTGPILKWMKSVK*
Ga0075024_10024485713300006047WatershedsRADRSPARPLQLHKPGIIAFAETLKDQLCKAVHCPEYLVFKDHIHISEVMSPNTADDSVTGPILRWIKNIK*
Ga0075017_10061402413300006059WatershedsPNIIGFAETLKSELCKAGDCPTYMVYKDHSHISEVMSPDTKDTSVTSPILKWIKSVK*
Ga0070765_10050523113300006176SoilAETLRDQLAKGGHAPTYVVYKDHSHISEVMSPDTADDSVTGPILKWIKSVK*
Ga0070765_10079954123300006176SoilFAKTLKDEICKAGKTCPTYLVFKDHSHISQVLSPDTADTSVTGPILNWMKTVK*
Ga0097621_10077376413300006237Miscanthus RhizosphereGELDLPGITAFHEVLKEQLCMVNHCPTVMVFKDHSHVSEVFSPNTADDSVTGPILKWMKSAKK*
Ga0075021_1102213923300006354WatershedsLCKAGHCAVYAVYKDHSHISEVMSPDTKDTSVTSPILKWIKSVK*
Ga0066653_1017223233300006791SoilLKNALCKAGRCPTTGYFKDHSHMSLVFSPNTADTSVTAPILKWMKSIK*
Ga0075421_10018908923300006845Populus RhizosphereLKNALCKAGRCPTTTFFMDHSHVSLVFSPNTADDSVTGPILKWMKSVK*
Ga0105240_1273230023300009093Corn RhizosphereCMANHCPTVMIFKDHSHVSEVFSPNTADDSVTGPILKWMKSAKK*
Ga0105245_1067063233300009098Miscanthus RhizosphereFAQTLRDELTKAGAKPTFMEFKDHSHISEVMSPDTADTSVTGPILKWIKSVK*
Ga0075418_1098877923300009100Populus RhizosphereDSANIWVFDEALKNALCKAGRCATSMVFKDHSHVSLVFSPNTADDSVTGPILKWMKSVK*
Ga0075418_1110959623300009100Populus RhizosphereETLKNALCKIGRCPTTAFYKDHSHVSLVFSPNTADNSVTAPILEWMKSVQ*
Ga0105247_1057697023300009101Switchgrass RhizospherePPNIIVFAETLRDELNKAGAKVTFANFKDHSHISEVMSPNTPDDSVTGPILKWIKDVK*
Ga0105247_1063556213300009101Switchgrass RhizosphereIGFAETLKSELCKAGECPAYMVYKDHSHISEVMSPDTADDSVTGPILKWIKSVK*
Ga0105243_1122011013300009148Miscanthus RhizosphereLDLSNIITFATTLQDKLTKAGAKPTFMEFKDHSHISEVMSPDTADTSVTGPILKWMKSVK
Ga0105242_1323877923300009176Miscanthus RhizosphereFAETLRDKLCEAKHCPQYATFKDHSHISEVLSPNTKDTSVTGPILKWMKSVK*
Ga0116225_108160513300009524Peatlands SoilAELCKAGRCPTYVVYKDHSHISEVMSPDTADTSVTGPILKWMKSVK*
Ga0116118_106447723300009637PeatlandCKAGQCPTYLVFKDHSHISEVMSPDTADTTVTGPILKWIKSVK*
Ga0126304_1121268223300010037Serpentine SoilKAGTCPMTMIFKDHSHMSAVFSANTADQSVTGPILEWMRALQ*
Ga0126310_1129971213300010044Serpentine SoilSFDEGLKNALCKAGRCPTTGYFKDHSHMSLVFSPNTTDTSVTAPILNWMKCIK*
Ga0126373_1316587713300010048Tropical Forest SoilTLRDELCKAGRCATYTVFKDHSHISEVMSPDTADASVTGPILKWIKSVK*
Ga0126377_1317720513300010362Tropical Forest SoilLCKAGRCPTTAELIKDHSHVSLVFSPNTADDSVTGPILKWMKSVK*
Ga0126379_1025547723300010366Tropical Forest SoilALKDALCKAGRCPTTAEFIKDHSHVSLVFSPNTADDSVTGPILKWMKSVK*
Ga0126379_1172507413300010366Tropical Forest SoilELCKANRCPTYTVFKDHSHISEVMSPDTADTSVTGPILKWIKSVK*
Ga0105239_1080169513300010375Corn RhizosphereVIAFAETLRDQLCKGGHCPTYTLFKDHSHISEVMSPDTKDTSVTGPILKWMKSVK*
Ga0136449_10077894433300010379Peatlands SoilKDELCKAGHCPTYLELKDHSHVSEVFSPNTADDSVTGPILKWMTGVK*
Ga0134121_1145218533300010401Terrestrial SoilQNIIVFGETLRDELTKAGHPVTFVRMKDHSHISEVMSPNTADDSVTTPILKWMKSVK*
Ga0134123_1359235523300010403Terrestrial SoilELTKAGAKPTFMNFKDHSHISEVMSPDTADTSVTGPILKWMKGVK*
Ga0150983_1071423423300011120Forest SoilLKIALCKAGRCPATGFFKDHSHMSLVFSPNTADNSVTGPILKWMKSVK*
Ga0150983_1161745113300011120Forest SoilNILAFDYALKNALCKAGRCPTTAELIKDHSHVSLVFSPNTADDSVTGPILKWMKGVK*
Ga0137313_102540723300011403SoilWVFDEALKNALCKAGRCATTAIFKDHSHVSLVFSPNTADDSVTGPILKWMKSVK*
Ga0137422_108549223300011416SoilCKAGRCPTSTVFKDHSHVSLVFSPNTADNSVTGPILKWMKSVK*
Ga0137441_119563823300011425SoilVFDEALKNALCKAGRCPTTAIFKDHSHASLVFSPNTADDSVTGPILKWIKSVK*
Ga0137383_1061433223300012199Vadose Zone SoilEALKNALCKTGKCPATAFFKDHSHVSLVFSPNTADNSVTGPILKWMKSVK*
Ga0157295_1042390513300012906SoilTLRDELTKAGAKPTFINFKDHSHISEVMSPDTADTSVTGPILKWMKSVK*
Ga0157374_1210516513300013296Miscanthus RhizosphereNIIGFAETLKSELCKAGDCPTYMVYKDHSHISEVLSPDTADTSVTGPILKWIKSVK*
Ga0157378_1154200133300013297Miscanthus RhizosphereEIDSANIWVFDEALKNALCKAGRCPTSAVFKDHSHVSLVFSPNSPDNSVTGPILKWMKSVK*
Ga0163162_1131479113300013306Switchgrass RhizosphereGVIAFAETLRDQLCKGGHCPTYVLFKDHSHISEVMSPDTKDNSVTGPILKWMKSVK*
Ga0163162_1245563523300013306Switchgrass RhizosphereETFKEQLCKAGKCPVYAVFKDHSHISEVMSPDTPDTSVTGPILKWIKSVK*
Ga0182024_1110987713300014501PermafrostMISVAELDPPNIIGFAETLRDELKKANRNVTYVVYKDHSHISEVMSPDTADKSVSGPILKWMKSVK*
Ga0181525_1064725513300014654BogPPNIIGFAETLRDELKKANRNVSYVAYKDHSHISEVMSPDTADTSVTGTILKWMKSVK*
Ga0181525_1075392613300014654BogMISVAELDPPNIIGFAETLRDELKKANRNVTYAVYKGHSHISEVMSPDTADESVTGPILRWMNSVR*
Ga0157379_1158929423300014968Switchgrass RhizosphereIGFAETLKSELCKAGTCPTYMVYKDHSHISEVMSPDTADTSVTGPILKWMKSVK*
Ga0132258_1101661233300015371Arabidopsis RhizosphereLKKALCNAGRCPTTAFFKDHSHASVVFSPNTADDSVTGPILKWMKSVK*
Ga0132258_1182085013300015371Arabidopsis RhizosphereDQLCKAGHCPTYVVFKDHSHISEVMSPNTPDDSVTGPILKWIKDVK*
Ga0132258_1277946133300015371Arabidopsis RhizosphereIWAFDEALKNALCKAGRCPTSAVFKDHSHVSLVFSPNTADNSVTGPILKWMKTVK*
Ga0132256_10068977813300015372Arabidopsis RhizospherePSIIAFAETLKDQLCKAGHCPMYVVFKDHSHISEVMSPDTADDSVTGPILKWIRSVK*
Ga0132257_10196932323300015373Arabidopsis RhizosphereGWGEIDSANIWVFDEGLKNALCKAGRCPTSAVFKDHSHVSLVFSPNTADDSVTGPILKWMKSVK*
Ga0132255_10457912323300015374Arabidopsis RhizosphereIWAFDEALKNALCKAGRCPTSAVFKDHSHVSLVFSPNTSDNSVTGPILKWMKTVK*
Ga0132255_10579098423300015374Arabidopsis RhizosphereQLCKAGHCPTYVVFKDHSHISEVMSPNTPDDSVTGPILKWIKDVK*
Ga0182041_1220510323300016294SoilGWGELDSSNILSFDEALKSALCKAGRCPTTAELIKDHSHVSLVFSPNTADDSVTGPILKWMKSVK
Ga0182032_1100283813300016357SoilYALKDALCKAGRCPATAELIKDHSHVSLVFSPNTADDSVTGPILKWMKSVK
Ga0187781_1137934323300017972Tropical PeatlandRDQLCKAGHCPTYEVYKDHSHISEVMSPDTADTSVTGPILKWIKSVK
Ga0173479_1073475923300019362SoilVFDEALKNALCKTGRCPTSAVFKDHSHVSLVFSPNTKDDSVTGPILKWMKSVK
Ga0210403_1085592813300020580SoilGFAETLKAELCKADRCPSYVVYKDHSHISEVMSPDTADTSVTGPILKWMKSVK
Ga0214196_102450833300021132FreshwaterNTAAFSETLKDELCKAGRCPVYLFNKGHNHFSEVMTADTADASVTGPVLKWMKSVK
Ga0210400_1031032443300021170SoilETLKDQLCKAGKCPTYTVFKDHSHISEVMSPDTADDSVTGPILKWMKSVK
Ga0210383_1068675133300021407SoilLDSSNILAFDVALKDALCKTGRCPTTAEFIKDHSHVSLVFSPNTADDSVTGPILKWMKSV
Ga0210383_1117107013300021407SoilPGMTEFNEVLKEQLCKVGRCPTVMVSKDQSHISEVMSVNTSDDSVSGPILKWIKSVK
Ga0210391_1153957223300021433SoilLDPPNIIGFAETLRDELKKANRNVTYVEYKDHSHISEVMSPDTADTSVTGTILKWMKSVK
Ga0210392_1005179543300021475SoilDELCKANRCPTYMQFKDHSHISEVMSPDTPDTSVTGPILKWIKSVK
Ga0210402_1054648123300021478SoilLCMVKHCPTVMVFKDHSHVSEVFSPNTADDSVTGPILKWMKSAKK
Ga0242657_122142223300022722SoilNIVGFAETLRDQLTKGGHAPTYVVYKDHSHISEVMSPDTADTSVTGPILTWIKSVK
Ga0207692_1100798513300025898Corn, Switchgrass And Miscanthus RhizosphereIGFAETLKSELCKAGDCPTYMVYKDHSHISEVMSPDTADTSVTGPILKWIKSVK
Ga0207699_1080719113300025906Corn, Switchgrass And Miscanthus RhizosphereIFLGAGELDLPGMTEFHEILKGQLCMVKNCPTVVVFKDHSHVSEVFSPNTADDSVTGPILKWMKSAKK
Ga0207671_1061633623300025914Corn RhizosphereIAFAETLRDQLCKGGHCPTYVLFKDHSHISEVMSPDTKDNSVTGPILKWMKSVK
Ga0207660_1062536123300025917Corn RhizosphereQLCKAGRCPTYLVFKDHSHISEVMSPNTADDSVTGPILKWIKDIK
Ga0207700_1081456823300025928Corn, Switchgrass And Miscanthus RhizosphereLPGMTEFHEILKGQLCMVKNCPTVMVFKGHSHVSEVFSPNTADDSVTGPILKWMKSAKK
Ga0207686_1153902813300025934Miscanthus RhizosphereAETLRDQLCKGGHCPTYVLFKDHSHISEVMSPDTKDNSVTGPILKWMKSVK
Ga0207708_1043888213300026075Corn, Switchgrass And Miscanthus RhizosphereNIWVFDEALKNALCKAGRCPTSAVFKDHSHVSLVFSPNTKDDSVTGPILKWMKSVK
Ga0207698_1039978913300026142Corn RhizosphereEALKNALCKTGRCPTSAVFKDHSHVSLVFSPNTKDDSVTGPILKWMKSVK
Ga0209221_106789023300027609Forest SoilMISVAELDPPNIIGFAETLRDELKKANRNVTYVVYKDHSHISEVMSPDTADQSVTGPILKWMKSVK
Ga0209060_1051674213300027826Surface SoilISFSKTLRDELCKAGNCPMYVEFKDHSHISEVMSPDTADTSVTGPILKWMKSVK
Ga0209403_1036343413300027839MarineDSPNVIVFDEALEDALCEAGRCPTVGIFDDHSHMSLVFAPNTDDDSVTGPILEWMRSVD
Ga0209465_1061503913300027874Tropical Forest SoilLRDELCKANRCPTYTVFKDHSHISEVMSPDTADTSVTGPILKWIKSVK
Ga0209624_1006535033300027895Forest SoilRDELKKATRNVTYVVYKEHSHISEVMSPDTADKSVSGPILEWMKSVK
Ga0311362_1112586113300029913BogSVAELDPANIIGFAETLRDELKKANRNVTYAVYKDHSHISEVMSPDTADESVTGPILRWMNSVR
Ga0311371_1078155033300029951PalsaMISVAELDPPNIIGFAETLRDELKKANRNVTYAVYKDHSHISEVMSPDTADESVTGPILRWMNSVR
Ga0311355_1060216323300030580PalsaTLRDELKKANRNVTYVAYKDHSHISEVMSPDTADTSVTGTILKWMKSVK
Ga0310039_1002843333300030706Peatlands SoilGFAETLRDELSKGGHSATYTVFKDHSHISEVMSPDTADTSVTGPILKWIKSVK
Ga0265461_1394578013300030743SoilPNIIGFAETLRDELKKANRNVTFVEYKDHSHISEVMSPDTADTSVTGTILKWMKSVK
Ga0308199_104429923300031094SoilALCKAGRCPATGFFKDHSHMSLVFSPNTADNSVTGPILKWMKSVK
Ga0265340_1023822313300031247RhizosphereLKDQLCMVNRCPTVMIFKDHSHVSEVFSPNTADDSVTAPILTWMKSVKK
Ga0302320_1048538033300031524BogIIAFAGTLKDELCKANRCPTYMEFKDHSHISEVMSPDTADTTVTGPILKWMKSVK
Ga0310686_10247110773300031708SoilFAETLRDQLTKGGHAPTYVVYKDHSHISEVMSPDTADTSVTGPILKWIKSVK
Ga0310686_11959068013300031708SoilIIGFAETLRDQLIKGGHAPTYVVYKDHSHISEVMSPDTADTSVTGPILKWIKSVK
Ga0310813_1129489613300031716SoilIWVFDEALKNALCKAGRCPTSAVFKDHSHVSLVFSPNSPDNSVTGPILKWMKSVK
Ga0307478_1148459123300031823Hardwood Forest SoilDPANIITFAETLKAELCKANRCPNYAVFKDHSHISEVMSPDTADTSVTGPILQWIKSVKK
Ga0307406_1169355923300031901RhizosphereGSCPTTTIFKDHSHMSAVFSANTADQSVTGPILEWMRAVK
Ga0308175_10323435713300031938SoilTLKDQLCQAKHCPTYMVFKDHSHISEVMSPDTPDTSVTGPILKWMKAVK
Ga0306926_1108383923300031954SoilLCKAGRCPATAELIKDHSHVSLVFSPNTADDSVTGPILKWMKSVK
Ga0307471_10124056623300032180Hardwood Forest SoilLCKANRCPTYVVFKDHSHISEVMSPDTADTSVTGPILKWMKSVK

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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