Metagenome / Metatranscriptome Family F099639

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099639
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	91 residues
Representative Sequence	MASIALIAGIGIFVVGVVVGIIAMVTHGIHREQQRYEEARRYRDEHGFWDDPEAPEYFLTEEAPDGVSMMARSFNGLYVRRPSIHRFDAELAAHA
Number of Associated Samples	84
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.35 %
% of genes near scaffold ends (potentially truncated)	33.01 %
% of genes from short scaffolds (< 2000 bps)	77.67 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.252 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.184 % of family members)
Environment Ontology (ENVO)	Unclassified (30.097 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.602 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.41% β-sheet: 1.63% Coil/Unstructured: 47.97%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00392	GntR	25.24
PF07702	UTRA	22.33
PF00583	Acetyltransf_1	3.88
PF01717	Meth_synt_2	1.94
PF03120	DNA_ligase_OB	0.97
PF03444	HrcA_DNA-bdg	0.97
PF01425	Amidase	0.97
PF00128	Alpha-amylase	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	1.94
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.97
COG0272	NAD-dependent DNA ligase	Replication, recombination and repair [L]	0.97
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.97
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.97
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.97
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	0.97
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.25 %
Unclassified	root	N/A	41.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.25 %
Unclassified	root	N/A	41.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.25 %
Unclassified	root	N/A	41.75 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	57.28 %
Unclassified	root	N/A	41.75 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	55.34 %
Unclassified	root	N/A	41.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	48.54 %
Unclassified	root	N/A	41.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.75 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	11.65 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.75 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	10.68 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.75 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	3.88 %
Thermomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	1.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.75 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.94 %
Actinomadura viridilutea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura viridilutea	0.97 %
Thermomonospora curvata	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora curvata	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_123209033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1132	Open in IMG/M
3300005177\|Ga0066690_10169692	Not Available	1442	Open in IMG/M
3300005332\|Ga0066388_100031277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5007	Open in IMG/M
3300005434\|Ga0070709_10003456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8477	Open in IMG/M
3300005435\|Ga0070714_100026132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	4824	Open in IMG/M
3300005435\|Ga0070714_100684929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	988	Open in IMG/M
3300005435\|Ga0070714_101473698	Not Available	665	Open in IMG/M
3300005436\|Ga0070713_100641313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1011	Open in IMG/M
3300005436\|Ga0070713_101085034	Not Available	773	Open in IMG/M
3300005467\|Ga0070706_101552791	Not Available	604	Open in IMG/M
3300005533\|Ga0070734_10024985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora curvata	3868	Open in IMG/M
3300005537\|Ga0070730_10056170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2821	Open in IMG/M
3300005541\|Ga0070733_10356151	Not Available	971	Open in IMG/M
3300005549\|Ga0070704_102251194	Not Available	507	Open in IMG/M
3300005586\|Ga0066691_10403877	Not Available	812	Open in IMG/M
3300005764\|Ga0066903_100193100	All Organisms → cellular organisms → Bacteria	3029	Open in IMG/M
3300005764\|Ga0066903_101042355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1501	Open in IMG/M
3300005764\|Ga0066903_105023026	Not Available	702	Open in IMG/M
3300006175\|Ga0070712_100943937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	745	Open in IMG/M
3300006854\|Ga0075425_100104513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3224	Open in IMG/M
3300006893\|Ga0073928_10027216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	5610	Open in IMG/M
3300007076\|Ga0075435_100166769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1857	Open in IMG/M
3300009038\|Ga0099829_10926881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	723	Open in IMG/M
3300009090\|Ga0099827_10073475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2648	Open in IMG/M
3300010043\|Ga0126380_10502003	Not Available	931	Open in IMG/M
3300010046\|Ga0126384_10031966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3503	Open in IMG/M
3300010048\|Ga0126373_10186627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1999	Open in IMG/M
3300010358\|Ga0126370_11203276	Not Available	705	Open in IMG/M
3300010360\|Ga0126372_10148601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1868	Open in IMG/M
3300010360\|Ga0126372_10783249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	942	Open in IMG/M
3300010361\|Ga0126378_10056536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3688	Open in IMG/M
3300010361\|Ga0126378_11095234	Not Available	898	Open in IMG/M
3300010362\|Ga0126377_12634157	Not Available	578	Open in IMG/M
3300010366\|Ga0126379_10747641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1074	Open in IMG/M
3300010366\|Ga0126379_11250635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	849	Open in IMG/M
3300010396\|Ga0134126_10015480	All Organisms → cellular organisms → Bacteria → Terrabacteria group	9650	Open in IMG/M
3300010398\|Ga0126383_10079008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2864	Open in IMG/M
3300010937\|Ga0137776_1004124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1992	Open in IMG/M
3300011120\|Ga0150983_11543972	Not Available	539	Open in IMG/M
3300011120\|Ga0150983_11735828	Not Available	509	Open in IMG/M
3300011120\|Ga0150983_12492073	Not Available	502	Open in IMG/M
3300012096\|Ga0137389_10328623	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1298	Open in IMG/M
3300012199\|Ga0137383_10519454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	872	Open in IMG/M
3300012199\|Ga0137383_10835635	Not Available	672	Open in IMG/M
3300012206\|Ga0137380_10007864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	9590	Open in IMG/M
3300012207\|Ga0137381_11302573	Not Available	619	Open in IMG/M
3300012209\|Ga0137379_10960965	Not Available	759	Open in IMG/M
3300012356\|Ga0137371_10224219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1469	Open in IMG/M
3300012359\|Ga0137385_11166165	Not Available	631	Open in IMG/M
3300012363\|Ga0137390_10008323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	8982	Open in IMG/M
3300012957\|Ga0164303_11118624	Not Available	570	Open in IMG/M
3300016319\|Ga0182033_10465879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1080	Open in IMG/M
3300016319\|Ga0182033_12154806	Not Available	509	Open in IMG/M
3300016357\|Ga0182032_12030802	Not Available	505	Open in IMG/M
3300020582\|Ga0210395_10040249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3424	Open in IMG/M
3300021402\|Ga0210385_10249555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1304	Open in IMG/M
3300021474\|Ga0210390_10034174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura viridilutea	4152	Open in IMG/M
3300021474\|Ga0210390_10124950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	2158	Open in IMG/M
3300021559\|Ga0210409_11020080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	702	Open in IMG/M
3300021560\|Ga0126371_10301502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1729	Open in IMG/M
3300021560\|Ga0126371_10760573	Not Available	1116	Open in IMG/M
3300022557\|Ga0212123_10066533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3139	Open in IMG/M
3300025910\|Ga0207684_11139725	Not Available	648	Open in IMG/M
3300025915\|Ga0207693_10028154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4440	Open in IMG/M
3300025916\|Ga0207663_10050805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	2578	Open in IMG/M
3300025928\|Ga0207700_10035065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3610	Open in IMG/M
3300025939\|Ga0207665_11521381	Not Available	531	Open in IMG/M
3300026551\|Ga0209648_10459138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	783	Open in IMG/M
3300027165\|Ga0208608_104687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	839	Open in IMG/M
3300027826\|Ga0209060_10019060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	3649	Open in IMG/M
3300027857\|Ga0209166_10223075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1007	Open in IMG/M
3300027867\|Ga0209167_10623954	Not Available	590	Open in IMG/M
3300031090\|Ga0265760_10142234	Not Available	782	Open in IMG/M
3300031543\|Ga0318516_10137257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1401	Open in IMG/M
3300031544\|Ga0318534_10234731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1058	Open in IMG/M
3300031546\|Ga0318538_10124741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1347	Open in IMG/M
3300031546\|Ga0318538_10227936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	998	Open in IMG/M
3300031561\|Ga0318528_10718319	Not Available	534	Open in IMG/M
3300031668\|Ga0318542_10405882	Not Available	704	Open in IMG/M
3300031708\|Ga0310686_117971741	Not Available	836	Open in IMG/M
3300031744\|Ga0306918_11441534	Not Available	527	Open in IMG/M
3300031748\|Ga0318492_10688732	Not Available	547	Open in IMG/M
3300031751\|Ga0318494_10830295	Not Available	541	Open in IMG/M
3300031764\|Ga0318535_10075163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1451	Open in IMG/M
3300031769\|Ga0318526_10128643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1024	Open in IMG/M
3300031771\|Ga0318546_10601953	Not Available	773	Open in IMG/M
3300031771\|Ga0318546_11214727	Not Available	530	Open in IMG/M
3300031781\|Ga0318547_10296434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	982	Open in IMG/M
3300031781\|Ga0318547_10630499	Not Available	665	Open in IMG/M
3300031782\|Ga0318552_10158985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1137	Open in IMG/M
3300031819\|Ga0318568_10128635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1537	Open in IMG/M
3300031821\|Ga0318567_10418249	Not Available	760	Open in IMG/M
3300031835\|Ga0318517_10093854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1312	Open in IMG/M
3300031890\|Ga0306925_12223212	Not Available	509	Open in IMG/M
3300031910\|Ga0306923_10344117	Not Available	1701	Open in IMG/M
3300031910\|Ga0306923_10687861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1140	Open in IMG/M
3300031910\|Ga0306923_12061608	Not Available	577	Open in IMG/M
3300031946\|Ga0310910_11522874	Not Available	513	Open in IMG/M
3300031947\|Ga0310909_10762520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	801	Open in IMG/M
3300032060\|Ga0318505_10112079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1243	Open in IMG/M
3300032063\|Ga0318504_10640856	Not Available	511	Open in IMG/M
3300032180\|Ga0307471_101838977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	756	Open in IMG/M
3300033289\|Ga0310914_11896254	Not Available	501	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.06%
Host-Associated	Host-Associated	1.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.15%
Aquatic	Environmental → Aquatic	2.91%
Plants	Host-Associated → Plants	1.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.15%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.79%
Loam	Environmental → Terrestrial → Soil → Loam	21.36%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.88%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.94%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.91%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.94%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027165	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF035 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1232090333	3300000956	Soil	MAGIALIAAIGIFAIGVFVGVVAMVSHGIHREQQRYEEARRYREDYGILDGSDSTGRFIPVEAPDGVSMVARSFNGLYVRRPAAGKHDAELATLA*
Ga0066690_101696922	3300005177	Soil	MATIALIAAIGIFAVGVVVGIIAMVTHGIHRERRRYEEERRYRDEHRLWDEPGAREYFLPDEAPDGVSLAARRFNGLYVRRPTVHRDDADLVLQG*
Ga0066388_1000312775	3300005332	Tropical Forest Soil	MAGIVLIAAIGIFAIGVFVGIVAMVSHGIHREQQRYEEARRHREDYGILDGPDSTGRFITEEAPDGVSLVARSFNGLYVRRPTAPRNDPELATLA*
Ga0070709_100034568	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MATIALIAAIGIFTIGVVVGVIGMVSHGIHREQQRFEEARRYRDENGLWDDPESLGYFLSDEAPDGVSLAARRFNGLYVRRPAGQRQDSDLVLQD*
Ga0070714_1000261323	3300005435	Agricultural Soil	MATIALITAIGIFAIGVVVGVIAMVTRGIHREQRRYEQARRHRDENGLWDDPEAQGYFLSEEAPDGVSLMARSFNGLYVRRPTVRRHDSDLVLQG*
Ga0070714_1006849291	3300005435	Agricultural Soil	MAAIALIAAIGIFTVGVVVGVIAMVTHGIHRERRRYEEERRYRDKHGIWDDPAAKEYFLTDEAPDGVSLAARRFNGLYVRRPTDRRHDSDLVLQG*
Ga0070714_1014736981	3300005435	Agricultural Soil	MATIALIAAVGIFTVGVVVGVIAMVTHGIHREQRRYEEVRRYRDQHGIWDDPESPEYFLSEQAPDGVSHAARRFNGLYVRRPTVHSNDSELVLQG*
Ga0070713_1006413132	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MASIALIAGTGIFVVGVVVGIIAMVTRGIHREQQRYEEARRYRDEHGFWDDPEAPEYFLTEEAPDGVSLMARSFN
Ga0070713_1010850341	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAAIALIAGIGIFTVGVVVGVIAMVTHGIHREQRRYEEQRRYRDKHGIWDDPAAKEYFLTDEAPDGVSLAARRFNGLYVRRPTDRRHDSDLVLQG*
Ga0070706_1015527911	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MASIALIAGTGIFVVGVVVGIIAMVTRGIHREHQRYEEARRYRDEHGLWDDPEAPEYFLTEEAPDGVSLMARSFNGLYVRRPSIHHFDAELAARA*
Ga0070734_100249852	3300005533	Surface Soil	MATIALIAAIGIFTVGVVVGVIAMVTHGIHHEQRRYEEVRRYRDAHGIWDDPEYFFSEQAPNGVSHAARRFNGLYVRRPTVHSDDPDLVLQG*
Ga0070730_100561702	3300005537	Surface Soil	MAGIALIAAIGIFAVGVVVGIIAMVTHGIHREQRRYEEARRYREEYGNWGGPSPHWHFLPDQAPDGVSLVARSFNGLYVRRPSARQRDAEMATLA*
Ga0070733_103561512	3300005541	Surface Soil	MASIALIAALGIFAVGVVVGVIAMVTHGIHRERRRYTETRRYREEHGLWDDPHDPGHFLPEEAPDGVSMMARGFNGLYVRRTADHRYDAELAARA*
Ga0070704_1022511941	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MAAIALIAAIGIFTVGVVVGVIAMVTHGIHRERRRYEEVRRYRDKHGIWDDPVAKEYFLTDEAPDGVS
Ga0066691_104038772	3300005586	Soil	AVGVVVGIIAMVTHGIHRERRRYEEERRYRDEHRLWDEPGAREYFLPDEAPDGVSLAARRFNGLYVRRPTVQSHDADLVLQG*
Ga0066903_1001931003	3300005764	Tropical Forest Soil	MATIVLIAAIGIFTIGVVVGIIGMVSHGIHTERQRYEETRRYRDEHGLWDDFEAQEYFLSDEAPDGVSLAARRLNGLYVRRPTVHRHDSDLVLQD*
Ga0066903_1010423551	3300005764	Tropical Forest Soil	MASIALIAGIGIFVVGVVVGVIAMVTRGIHREQQRYEQARRYRDEHGLWDDPEAPEYFLTEQAPDGVSSMARSFNGLYVRRPSIHRFDAELAAHA*
Ga0066903_1050230261	3300005764	Tropical Forest Soil	MAGIVLIAAIGIFAIGVFVGIVAMVSHGIHREQQRYEEARRHREDYGILDGPDSTGRFITEEAPDGVSLVARSFNGLYVRRPAAPRNDPELATLA*
Ga0070712_1009439371	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GIFTVGVVVGVIAMVTHGIHREQRRYEEQRRYRDKHGIWDDPAAKEYFLTDEAPDGVSLAARRFNGLYVRRPTDRRHDSDLVLQG*
Ga0075425_1001045133	3300006854	Populus Rhizosphere	MATIVLIAAIGIFTIGVVVGIIGMVSHGIHRERQRYEETRRYRHEHGLWDDLEAQEYFLADEAPDGVSLAARRLNGLYVRRPTVHRHDSDLVLQG*
Ga0073928_100272163	3300006893	Iron-Sulfur Acid Spring	MASIALIAGIGIFVTGVIVGVIAMVTHGIHRERRRYEEERRHRDEQGLWSDPDTREYFLTDEAPDGVSLAARRFNGLYVRRPTGRRDDADLVLRG*
Ga0075435_1001667691	3300007076	Populus Rhizosphere	MATIVLIAAIGIFTIGVVVGIIGMVSHGIHRERQRYEETRRYRDEHGLWDDLEAQEYFLADEAPDGVSLAARRLNGLYVRRPTVHRHDSDLVLQG*
Ga0099829_109268811	3300009038	Vadose Zone Soil	MILIAAVGIFVVGVVVGIIFMVCGGIRREQRRYEEARRFRQEHGIWDDPDAERHFLPDEAPDGVSMIARGVNGLYVRRLPTVHGYDTKLAA*
Ga0099827_100734753	3300009090	Vadose Zone Soil	MAAIALITAIGIFAVGVVVGVIAMVTHGIHRERRRYEEERRYRDERRLWDEPGAREYFLPDEAPDGVSLAARRFNGLYVRRPTVHRHDADLVLQG*
Ga0126380_105020032	3300010043	Tropical Forest Soil	MATIVLIAAIGIFTIGVVVGIIGMVSHGIHRERQRYEETRRYRDEHGLWDDFEAQEYFLSNEAPDGVSLAARRLNGLYVRRPTVHRHDSDLVLQD*
Ga0126384_100319664	3300010046	Tropical Forest Soil	MAGIALIAGIGIFAIGVFVGIVAMVSHGIHREQQRYEEARRYREEYGMGDGSDSPGHFLPEDAPDGVSLVARGFNGLYVRRPTGDRYDAELATHA*
Ga0126373_101866272	3300010048	Tropical Forest Soil	MATIVLIAAIGIFTIGVVVGIIGMVSHGIHRERQRYEETRRYRDEHGLWDDFEAQEYFLSDEAPDGVSLAARRLNGLYVRRPTVHRHDSDLVLQG*
Ga0126370_112032762	3300010358	Tropical Forest Soil	MASIALIAGLGIFVVGVVVGIIAMVTRGIHREQQRYEEARRYRDEHGFWDDPEAPEYFLDEEAPDGVSLAARRLNGLYVRRPTVHRHDSDLVLQD*
Ga0126372_101486013	3300010360	Tropical Forest Soil	MATIVLIAAIGIFTIGVVVGIIGMVSHGIHRERQRYEETRRYRDEHGLWDDHQAQEYFLSDEAPDGVSLAARRLNGLYVRRPTVHRHDSDLVLQG*
Ga0126372_107832491	3300010360	Tropical Forest Soil	MAGIVLIAAIGIFAIGVFVGIVAMVSHGIHREQQRYEEARRHREDYGILDGPDSTGRFITEEAPDGVSLVARSFNGLYVRRPTAPRNDPELATLT*
Ga0126378_100565364	3300010361	Tropical Forest Soil	MATIVLIAAIGIFTIGVVVGIIGMVSHGIHRERQRYEETRRYRDEHGLWDDHEAQEYFLSDEAPDGVSLAARRLNGLYVRRPTVHRHDSDLVLQG*
Ga0126378_110952342	3300010361	Tropical Forest Soil	MATIVLIAAIGIFTIGVVVGIIGMVSHGIHTERQRYEETRRYRDEHGLWDDFEAQEYFLSDEAPDGVSLAARRLNGLYVRRPTVHRHDADLVLQG*
Ga0126377_126341571	3300010362	Tropical Forest Soil	MAGIVLIAAIGIFAIGVFVGIVAMVSHGIHREQQRYEQARRHREDYGILDGPDSTGRFITEEAPDGVSL
Ga0126379_107476412	3300010366	Tropical Forest Soil	MATIVLIAAIGIFTIGVVVGIIGMVSHGIHRERQRYEETRRYRDEHGLWDDFEAQEYFLSDEAPDGVSLAARRLNGLYVRRP
Ga0126379_112506352	3300010366	Tropical Forest Soil	MASIALIAGIGIFVVGVVVGVIAMVTRGIHREQQRYEQARRYRDEHGLWDDPEAPEYFLTEEAPDGVSLMARSFNGLYVRRPTIHRFDEELAARA*
Ga0134126_1001548010	3300010396	Terrestrial Soil	MATIALIAAIGIFTIGVVVGVIGMVSHGIHREQQRFEEARRYRDENGLWDDPESLGYFLSDEAPDGVSLAARRFN
Ga0126383_100790084	3300010398	Tropical Forest Soil	MAGIALIAGIGIFAIGVFVGIVAMVSHGIHREQQRYEEARRYREEYGMGDGSDSPGHFLPEETPDGVSLVARGFNGLYVR
Ga0137776_10041242	3300010937	Sediment	MATIALIAAIGIFTIGVVVGVIAMVTRGIHHEQRRYEEVRRYRDEHGIWDDPEYFLSEQAPNGVSHAARRFNGLYVRRPTVHSDDPDLVLQG*
Ga0150983_115439721	3300011120	Forest Soil	MAAIALIAGIGIFTVGVVVGVIAMVTHGIHRERRRYEEQRRYRDKHGIWDDPAAKEYFLTDEAPDGVSLAARRFNGLYVRRLTDRRHDSDLVLQG*
Ga0150983_117358281	3300011120	Forest Soil	MATIALIAGIGIFVIGVVVGVIAMVTHGIHREQRRYEEVRRYRDEHGFWDDPEAREYFLTDEAPDGVSLAARRFNGLYVRRPPAQRHDADLVLQG*
Ga0150983_124920731	3300011120	Forest Soil	MATIALIAGIGIFVIGVVVGVIAMVTHGIHREQRRYEEVRRYRDENGLWDGPEAREYFLTDEAPDGVSLAARRFNGLYVRRPPAQRHDADLVLQG*
Ga0137389_103286232	3300012096	Vadose Zone Soil	MAAIALTAIGIFAIGVVIGVIAMVRHGIHREQRRFDEARRYREEQGIWDDPDAERHFLPDEAPDGVSMIARGVNGLYVRRLPTVHGYDTKLAA*
Ga0137383_105194541	3300012199	Vadose Zone Soil	MAAIALIAAIGIFTVGVVVGVIAMVTHGIHRERRRYQEERRYRDEHGLWDEPGAREYFLPDEAPDGVSQTARRFNGLYVRRPTDDHRHD
Ga0137383_108356352	3300012199	Vadose Zone Soil	MATIALIAAIGIFAVGVVVGIIAMVTHGIHRERRRYEEERRYRDEHRLWDEPGAREYFLPDEAPDGVSLAARRFNGLYVRRPTHHRDDADLVLQG*
Ga0137380_100078644	3300012206	Vadose Zone Soil	MAAIALIAAIGIFTVGVVVGVIAMVTHGIHREQRRYQQERRYRDEHGLWDEPGAREYFLPDEAPDGVSQTARRFNGLYVRRPTDDHRRDAGLVLQG*
Ga0137381_113025731	3300012207	Vadose Zone Soil	MAAIALIAAIGIFTVGVVVGVIAMVTHGIHRERRRYQEERRYRDEHGLWDEPGAREYFLPDEAPDGVSLAARRFNGLYVRRLTDHPHDADLVLQG*
Ga0137379_109609651	3300012209	Vadose Zone Soil	VVVGVIAMVTHGIHRERRRYQEERRYRDEHGLWDEPGAREYFLPDEAPDGVSLAARRFNGLYVRRLTDHPHDADLVLQG*
Ga0137371_102242192	3300012356	Vadose Zone Soil	MAAIALIAAIGIFTVGVVVGVIAMVTHGIHREQRRYQQERRYRDEHGLWDEPGAREYFLPDEAPDGVSQTARRFNGLYVRRPTDDHRHDAGLVLQG*
Ga0137385_111661651	3300012359	Vadose Zone Soil	IFTVGVVVGVIAMVTHGIHRERRRYQEERRYRDEHGLWDEPGAREYFLPDEAPDGVSLAARRFNGLYVRRLTDHPHDADLVLQG*
Ga0137390_100083231	3300012363	Vadose Zone Soil	MASMSLSAAVGIFVVGVVVGIIFMVCGGIRREQRRYEEARRFRQEHGIWDDPDAERHFLPDEAPDGVSMIARGVNGLYVRRLPTVHGYDTKLAA*
Ga0164303_111186241	3300012957	Soil	MAAIALIAAIGIFTVGVVVGVIAMVTHGIHRERRRYEEERRYRDKHGIWDDTAAKEYFLTEEAPDGVSLAARRFNGLYVRRP
Ga0182033_104658792	3300016319	Soil	MASIALIAGIGIFVVGVVVGIVAMVTRGIHREQQRYEQARRYRDEHGLWDDPDASEYFLTEEAPDGVSMMARSFNGLYVRRPSIQRFD
Ga0182033_121548061	3300016319	Soil	MASIALIAGIGIFVVGVVVGVVAMVTRGIHREQQRYEQARRYRDEHGLWDDPEAPEYFLTEEAPDGVSMMARSFNGLYVRRPSIQRFD
Ga0182032_120308021	3300016357	Soil	VVGIVAMVTRGIHREQQRYEEARRYRDEHGFWDDPEAPEYFLTEEAPDGVSMMARRFNGLYVRHPSIHRLDAELAARA
Ga0210395_100402493	3300020582	Soil	MATIALIAGIGIFVIGVVVGVIAMVTHGIHREQRRYEEVRRYRDEHGFWDDPEAREYFLTDEAPDGVSLAARRFNGLYVRRPPAQRHDADLVLQG
Ga0210385_102495551	3300021402	Soil	MATIALIAGIGIFVIGVVVGVIAMVTHGIHREQRRYEEVRRYRDEHGFWDDPEAREYFLTDEAPDGVSLAARRFNGLYVRRPPAQRHDADLV
Ga0210390_100341742	3300021474	Soil	MATIALIAGIGIFVIGVVVGVIAMVTHGIHREQRRYEEVRRYRDENGLWDGPEAREYFLTDEAPDGVSLAARRFNGLYVRRPPAQRHDADLVLQG
Ga0210390_101249502	3300021474	Soil	MASIALIAALGIFAVGVVVGVIAMVTHGIHRERRRYTEARRYREEHGLWDDPRDPGHFRPEEAPDGVSMMARGFNGLYVRRTADHRYDAELAARA
Ga0210409_110200802	3300021559	Soil	VVVGVIAMVTHGIHRERRRYTEARRYREEHGLWDDPRDPGHFLPEEAPDGVSMMARGFNGLYVRRTADHRYDAELAARA
Ga0126371_103015022	3300021560	Tropical Forest Soil	MATIVLIAAIGIFTIGVVVGIIGMVSHGIHTERQRYEETRRYRDEHGLWDDFEAQEYFLSDEAPDGVSLAARRLNGLYVRRPTVHRHDADLVLQG
Ga0126371_107605732	3300021560	Tropical Forest Soil	MASIALIAGIGIFVVGVVVGIIAMVTHGIHREQQRYEEARRYRDEHGFWDDPEAPEYFLTEEAPDGVSMMARSFNGLYVRRPSIHRFDAELAAHA
Ga0212123_100665332	3300022557	Iron-Sulfur Acid Spring	MASIALIAGIGIFVTGVIVGVIAMVTHGIHRERRRYEEERRHRDEQGLWSDPDTREYFLTDEAPDGVSLAARRFNGLYVRRPTGRRDDADLVLRG
Ga0207684_111397251	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MASIALIAGTGIFVVGVVVGIIAMVTRGIHREHQRYEEARRYRDEHGLWDDPEAPEYFLTEEAPDGVSLMARSFNGLYVRRPSIHHFDAELAARA
Ga0207693_100281545	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MATIALIAAIGIFTIGVVVGVIGMVSHGIHREQQRFEEARRYRDENGLWDDPESLGYFLSDEAPDGVSLAARRFNGLYVRRPAGQRQDSD
Ga0207663_100508053	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MATIALIAAIGIFTIGVVVGVIGMVSHGIHREQQRFEEARRYRDENGLWDDPESLGYFLSDEAPDGVSLAARRFNGLYVRRPAGQRQDSDLVLQG
Ga0207700_100350655	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MATIALIAAVGIFTVGVVVGVIAMVTHGIHREQRRYEEVRRYRDQHGIWDDPESPEYFLSEQAPDGVSHAARRFNGLYVRRPTVHSNDSELVLQG
Ga0207665_115213811	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MAAIALIAAIGIFTVGVVVGVIAMVTHGIHRERRRYEEERRYRDKHGIWDDPAAKEYFLTDEAPDGVSQAARRFNGLYVRRPTDRRHDSDLVLQG
Ga0209648_104591381	3300026551	Grasslands Soil	MASMILIAAVGIFVVGVVVGIIFMVCGGIRREQRRYEEARRFRQEHGIWDDPDAERHFLPDEAPDGVSMIARGVNGLYVRRLPTVHGYDT
Ga0208608_1046872	3300027165	Forest Soil	MATIALIAGIGIFVIGVVVGVIAMVTHGIHREQRRYEEVRRYRDEHGFWDDPEAREYFLTDEAPDGVSLAARRFNGLYVRRPPAQR
Ga0209060_100190603	3300027826	Surface Soil	MATIALIAAIGIFTVGVVVGVIAMVTHGIHHEQRRYEEVRRYRDAHGIWDDPEYFFSEQAPNGVSHAARRFNGLYVRRPTVHSDDPDLVLQG
Ga0209166_102230753	3300027857	Surface Soil	GILAVGVVVGIIAMVTHGIHREQRRYEEARRYREEYGNWGGPSPHWHFLPDQAPDGVSLVARSFNGLYVRRPSARQRDAEMATLA
Ga0209167_106239541	3300027867	Surface Soil	MASIALIAALGIFAVGVVVGVIAMVTHGIHRERRRYTETRRYREEHGLWDDPHDPGHFLPEEAPDGVSMMARGFN
Ga0265760_101422342	3300031090	Soil	MATIALIAGIGIFVIGVVVGVIAMVTHGIHREQRRYEEVRRYRDEHGLWDDPEAREYFLTDEAPDGVSLAARRFNGLYVRRPPAHRNDADLVLQG
Ga0318516_101372572	3300031543	Soil	MASIALITGIGIFVVGVVVGIVAMVTRGIHREQQRYEEARRYRDEHGLWDDPEAPEYFLTEEAPDGVSMMARSFNGLYVRRPSIQRFDAELAARA
Ga0318534_102347311	3300031544	Soil	MASIALITGIGIFVVGVVVGIIAMVTRGIHREQQRYEEARRYRDEHGLWDDPEAPEYFLTEEAPDGVSMMARSFNGLYVRRP
Ga0318538_101247412	3300031546	Soil	MASIALIAGIGIFVVGVVVGVVAMVTRGIHREQRRYEQARRYRDEHGLWDDPEAPEYFLTEEAPDGVSSMARSFNGLYVRRPSINRFDAELAARECHGSRLAAGHRSGGGPAADLR
Ga0318538_102279361	3300031546	Soil	MAGIALIAAIGIFAIGVFVGIVAMVSHGIHREQRRYEEARRYREEYGIVDGSDSPGHFLPEEAPDGVSLVARGFNGLYV
Ga0318528_107183191	3300031561	Soil	MAGIALIAAIGIFAIGVFVGIVAMVSHGIHREQRRYEEARRYREEYGIVDGSDSPGHFLPEEAPDGVSLVARGFNGLYVRRPTVQRYDAELATQA
Ga0318542_104058821	3300031668	Soil	MAGIALIAAIGIFAIGVFVGIVAMVSHGIHREQRRYEEARRYREEYGIVDGSDSPGHFLPEEAPDGVSLVARG
Ga0310686_1179717412	3300031708	Soil	MASIALIAALGIFAVGVVVGVIAMVTHGIHRERRRYTETRRYREEHGLWDDPRDPGHFLPEEAPDGVSMMARGFNGLYVRRTADHRYDAELAARA
Ga0306918_114415341	3300031744	Soil	MAGIALIAAIGIFAIGVFVGIVAMVSHGIHREQRRYEEARRYREEYGIVDGSDSPGHFLPEEAPDGVSLVARGFNGLYVRRPTVQRYDAELATQ
Ga0318492_106887321	3300031748	Soil	MASIALIAGIGIFVVGVVVGVVAMVTRGIHREQQRYEQARRYRDEHGLWDDPDAPEYFLTEEAPDGVSSMARSFNGLYVRRPSINRFDAELAARA
Ga0318494_108302951	3300031751	Soil	MASIALIAGIGIFVVGVVVGVVAMVTRGIHREQRRYEQARRYRDEHGFWDDPDAPEYFLTEEAPDGVSSMARSFNGLYVRRPSINRFDAELAARA
Ga0318535_100751631	3300031764	Soil	MASIALIAGIGIFVVGVVVGIVAMVTRGIHREQQRYEEARRYRDEHGFRDDPEAPEYFLTEEAPDGVSMMARSFNGLYVRRPSIQRFDAELAARA
Ga0318526_101286432	3300031769	Soil	MASIALIAGIGIFVVGVVVGVVAMVTRGIHREQQRYEQARRYRDEHGLWDDPDAPEYFLTEEAPDGVSSMARSFNGLY
Ga0318546_106019531	3300031771	Soil	MASIALITGIGIFVVGVVVGIIAMVTRGIHREQQRYEEARRYRDEHGFRDDPEAPEYFLTEEAPDGVSMMARRFNGLYVRHPSIHRLDAELAARA
Ga0318546_112147271	3300031771	Soil	MASIALIAGIGIFVVGVVVGVVAMVTRGIHREQRRYEQARRYRDEHGLWDDPEAPEYFLTEEAPDGVSMMARSFNGLYVRRPSIHRLDAELAARA
Ga0318547_102964342	3300031781	Soil	MASIALITGIGIFVVGVVVGIIAMVTRGIHREQQRYEEARRYRDEHGLWDDPEAPEYFLTEEAPDGVSMMARSFNGLYVRRPSIQRFDTELAARV
Ga0318547_106304991	3300031781	Soil	MAGIALIAAIGIFAIGVFVGIVAMVSHGIHREQRRYEEARRYREEYGIVDGSDSPGHFLPEEAPDGVSLVA
Ga0318552_101589851	3300031782	Soil	MASIALIAGIGIFVVGVVVGIVAMVTRGIHREQQRYEEARRYRDEHGFWDDPEAPEYFLTEEAPDGVSMMARSFNGLYVRRPSIQRFDAELAARA
Ga0318568_101286351	3300031819	Soil	MASIALIAGIGIFVVGVVVGVVAMVTRGIHREQRRYEQARRYRDEHGLWDDPDAPEYFLTEEAPDGVSSMARSFNGLYVRRPSI
Ga0318567_104182492	3300031821	Soil	MASIALIAGLGIFVVGIVVGIIAMVTRGIHREQRRYEEARRYRDEHGFWDDPEAPEYFLTEEAPDGLSLMARSFNGLYVRRPSIHRFDAELAARA
Ga0318517_100938542	3300031835	Soil	MASIALIAGIGIFVVGVVVGVVAMVTRGIHREQRRYEQARRYRDEHGLWDDPEAPEYFLTEEAPDGVSMMARSFNGLYVRRPSIQRFDAELAARA
Ga0306925_122232121	3300031890	Soil	MASIALITGIGIFVVGVVVGIIAMVTRGIHREQQRYEEARRYRDEHGLWDDPEAPEYFLTEEAPDGVSMMARSFNGLYVRRPSIQRFDAELAARA
Ga0306923_103441171	3300031910	Soil	MAGIALIAAIGIFAIGVFVGIVAMVSHGIHREQQRYEEARRYREEYGIVDGSDSPGHFLPEEAPDGVSLVARGFNGLYVRRPTVQRYDAELATQA
Ga0306923_106878611	3300031910	Soil	MASIALIAGIGIFVVGVVVGVVAMVTRGIHREQRRYEQARRYRDEHGLWDDPDAPEYFLTEEAPDGVSSMARSFNGLYVRRPSINRFDAELAARA
Ga0306923_120616081	3300031910	Soil	MASIALIAGIGIFVVGVVVGIVAMVTRGIHREQQRYEEARRYRDEHGLWDDPEAPEYFLTEEAPDGVSMMARSFNGLYVRRPSIQRFDTELAARV
Ga0310910_115228741	3300031946	Soil	MAGIALIAAIGIFAIGVFVGIVAMVSHGIHREQQRYEEARRYREEYGIVDGSDSPGHFLPEEAPDGVSLVAR
Ga0310909_107625202	3300031947	Soil	MAGIALIAAIGIFAIGVFVGIVAMVSHGIHREQRRYEEARRYREEYGIVDGSDSPGHFLPEEAPDGVSLVAR
Ga0318505_101120792	3300032060	Soil	MASIALIAGIGIFVVGVVVGIVAMVTRGIHREQQRYEEARRYRDEHGFRDDPEAPEYFLTEEAPDGVSMMARRFNGLYVRHPSIHRLDAELAARA
Ga0318504_106408561	3300032063	Soil	MASIALIAGIGIFVVGVVVGIIAMVTRGIHREQQRYEQARRYRDEHGLWDDPEAPEYFLTEEAPDGVSMMARSFNGLYVRRPSIQRFDAE
Ga0307471_1018389771	3300032180	Hardwood Forest Soil	MAGIAIIAAIGIFAIGVVVGIVAMVSHGIRREQQRYEEARRYREEYGIWDGLDSSGHFIPNEAPDAVSLVARSFNGLYVRRPTVHKHDAELATLA
Ga0310914_118962541	3300033289	Soil	FVVGVVVGIIAMVTRGIHREQQRYEEARRYRDEHGLWDDPDAPEYFLTEEAPDGVSSMARSFNGLYVRRPSINRFDAELAARA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099639

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences