Metagenome / Metatranscriptome Family F099692

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099692
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	51 residues
Representative Sequence	RLIIMILTGDNQSQHDLLGDASELFSRKEAVDRAVHANTFLELVAALNAPVQ
Number of Associated Samples	85
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.88 %
% of genes near scaffold ends (potentially truncated)	94.17 %
% of genes from short scaffolds (< 2000 bps)	94.17 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.282 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.447 % of family members)
Environment Ontology (ENVO)	Unclassified (35.922 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.874 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.00% β-sheet: 0.00% Coil/Unstructured: 60.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF04972	BON	10.68
PF07238	PilZ	5.83
PF04916	Phospholip_B	5.83
PF00072	Response_reg	2.91
PF00359	PTS_EIIA_2	1.94
PF02954	HTH_8	1.94
PF01063	Aminotran_4	0.97
PF07228	SpoIIE	0.97
PF00589	Phage_integrase	0.97
PF00528	BPD_transp_1	0.97
PF06762	LMF1	0.97
PF01171	ATP_bind_3	0.97
PF00069	Pkinase	0.97
PF00781	DAGK_cat	0.97
PF05187	ETF_QO	0.97
PF08240	ADH_N	0.97
PF07690	MFS_1	0.97
PF00857	Isochorismatase	0.97
PF01244	Peptidase_M19	0.97
PF13419	HAD_2	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.88
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	1.94
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	1.94
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	0.97
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.97
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	0.97
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	0.97
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.97
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.97
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.97
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.97
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	0.97
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	0.97
COG2440	Ferredoxin-like protein FixX	Energy production and conversion [C]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.28 %
Unclassified	root	N/A	42.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.28 %
Unclassified	root	N/A	42.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.28 %
Unclassified	root	N/A	42.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	29.13 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.72 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.77 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.94 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.77 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.94 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.77 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.94 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.77 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.97 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.77 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.97 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.77 %
Citreicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Citreicoccus	0.97 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.77 %
Citreicoccus inhibens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Citreicoccus → Citreicoccus inhibens	0.97 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001175\|JGI12649J13570_1009837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1141	Open in IMG/M
3300001175\|JGI12649J13570_1021967	Not Available	687	Open in IMG/M
3300001634\|JGI20245J16306_1002287	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300002914\|JGI25617J43924_10347953	Not Available	514	Open in IMG/M
3300003370\|JGI26337J50220_1034695	Not Available	576	Open in IMG/M
3300004080\|Ga0062385_10241062	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300004080\|Ga0062385_10422212	All Organisms → cellular organisms → Bacteria → Acidobacteria	803	Open in IMG/M
3300004080\|Ga0062385_10823876	All Organisms → cellular organisms → Bacteria → Acidobacteria	609	Open in IMG/M
3300004080\|Ga0062385_10935989	Not Available	577	Open in IMG/M
3300004080\|Ga0062385_10959755	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300004092\|Ga0062389_103198103	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300004631\|Ga0058899_10240617	Not Available	662	Open in IMG/M
3300004631\|Ga0058899_10602271	Not Available	886	Open in IMG/M
3300005533\|Ga0070734_10481894	Not Available	707	Open in IMG/M
3300005602\|Ga0070762_10778424	Not Available	646	Open in IMG/M
3300005610\|Ga0070763_10781106	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300005610\|Ga0070763_10838956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300005921\|Ga0070766_10223323	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300005921\|Ga0070766_10279843	All Organisms → cellular organisms → Bacteria → Acidobacteria	1066	Open in IMG/M
3300005921\|Ga0070766_10894048	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300006174\|Ga0075014_100351419	All Organisms → cellular organisms → Bacteria → Acidobacteria	791	Open in IMG/M
3300006176\|Ga0070765_101743872	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300009143\|Ga0099792_10433401	All Organisms → cellular organisms → Bacteria → Acidobacteria	811	Open in IMG/M
3300009521\|Ga0116222_1502879	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300009633\|Ga0116129_1113444	Not Available	780	Open in IMG/M
3300010343\|Ga0074044_10776103	Not Available	626	Open in IMG/M
3300011269\|Ga0137392_10407236	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1129	Open in IMG/M
3300012211\|Ga0137377_11613866	Not Available	572	Open in IMG/M
3300012362\|Ga0137361_10226708	All Organisms → cellular organisms → Bacteria	1697	Open in IMG/M
3300012582\|Ga0137358_10294848	Not Available	1101	Open in IMG/M
3300012685\|Ga0137397_10496345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300012924\|Ga0137413_10198553	All Organisms → cellular organisms → Bacteria → Acidobacteria	1347	Open in IMG/M
3300014165\|Ga0181523_10206230	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300014201\|Ga0181537_10371825	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300017975\|Ga0187782_10522750	All Organisms → cellular organisms → Bacteria → Acidobacteria	908	Open in IMG/M
3300018024\|Ga0187881_10178024	All Organisms → cellular organisms → Bacteria → Acidobacteria	914	Open in IMG/M
3300018030\|Ga0187869_10536402	Not Available	555	Open in IMG/M
3300018034\|Ga0187863_10046717	All Organisms → cellular organisms → Bacteria → Proteobacteria	2490	Open in IMG/M
3300018038\|Ga0187855_10578309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300020583\|Ga0210401_10020237	All Organisms → cellular organisms → Bacteria → Acidobacteria	6397	Open in IMG/M
3300021170\|Ga0210400_10208012	All Organisms → cellular organisms → Bacteria	1592	Open in IMG/M
3300021181\|Ga0210388_10494663	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300021181\|Ga0210388_10971406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300021402\|Ga0210385_10279234	Not Available	1234	Open in IMG/M
3300021403\|Ga0210397_11570616	Not Available	511	Open in IMG/M
3300021405\|Ga0210387_10263053	All Organisms → cellular organisms → Bacteria	1511	Open in IMG/M
3300021406\|Ga0210386_10145215	All Organisms → cellular organisms → Bacteria	1981	Open in IMG/M
3300021406\|Ga0210386_11634786	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300021407\|Ga0210383_11453015	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300021420\|Ga0210394_11585634	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300021432\|Ga0210384_11800916	Not Available	518	Open in IMG/M
3300021474\|Ga0210390_10720068	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Citreicoccus → Citreicoccus inhibens	831	Open in IMG/M
3300021477\|Ga0210398_10149517	Not Available	1900	Open in IMG/M
3300021477\|Ga0210398_10967086	All Organisms → cellular organisms → Bacteria → Acidobacteria	680	Open in IMG/M
3300021479\|Ga0210410_10662449	Not Available	924	Open in IMG/M
3300021559\|Ga0210409_11259785	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300022557\|Ga0212123_10016723	All Organisms → cellular organisms → Bacteria → Acidobacteria	8911	Open in IMG/M
3300022557\|Ga0212123_10182706	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300022557\|Ga0212123_10439967	Not Available	862	Open in IMG/M
3300022722\|Ga0242657_1064801	Not Available	834	Open in IMG/M
3300022726\|Ga0242654_10197476	Not Available	698	Open in IMG/M
3300023019\|Ga0224560_113911	Not Available	506	Open in IMG/M
3300023030\|Ga0224561_1018299	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300024225\|Ga0224572_1108658	Not Available	513	Open in IMG/M
3300024271\|Ga0224564_1015196	All Organisms → cellular organisms → Bacteria → Acidobacteria	1350	Open in IMG/M
3300025412\|Ga0208194_1026732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	917	Open in IMG/M
3300026551\|Ga0209648_10262639	Not Available	1269	Open in IMG/M
3300027575\|Ga0209525_1116551	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300027635\|Ga0209625_1030430	All Organisms → cellular organisms → Bacteria → Acidobacteria	1204	Open in IMG/M
3300027737\|Ga0209038_10185736	Not Available	629	Open in IMG/M
3300027767\|Ga0209655_10058535	All Organisms → cellular organisms → Bacteria → Acidobacteria	1283	Open in IMG/M
3300027767\|Ga0209655_10206698	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300027855\|Ga0209693_10236737	All Organisms → cellular organisms → Bacteria → Acidobacteria	896	Open in IMG/M
3300027884\|Ga0209275_10526969	Not Available	675	Open in IMG/M
3300027895\|Ga0209624_10576251	Not Available	747	Open in IMG/M
3300027903\|Ga0209488_10025899	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4263	Open in IMG/M
3300027908\|Ga0209006_10948842	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300027908\|Ga0209006_11453310	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300028010\|Ga0265358_100792	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300028047\|Ga0209526_10542147	Not Available	753	Open in IMG/M
3300028775\|Ga0302231_10355827	Not Available	615	Open in IMG/M
3300028806\|Ga0302221_10481249	Not Available	541	Open in IMG/M
3300028873\|Ga0302197_10338472	Not Available	673	Open in IMG/M
3300028906\|Ga0308309_10435281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1128	Open in IMG/M
3300028909\|Ga0302200_10404208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300028909\|Ga0302200_10464787	Not Available	581	Open in IMG/M
3300029882\|Ga0311368_10076349	All Organisms → cellular organisms → Bacteria → Acidobacteria	2939	Open in IMG/M
3300029944\|Ga0311352_11152152	Not Available	591	Open in IMG/M
3300029999\|Ga0311339_11315383	Not Available	654	Open in IMG/M
3300030058\|Ga0302179_10276716	Not Available	740	Open in IMG/M
3300030399\|Ga0311353_11273707	Not Available	604	Open in IMG/M
3300030503\|Ga0311370_10663342	Not Available	1234	Open in IMG/M
3300030524\|Ga0311357_10046003	All Organisms → cellular organisms → Bacteria	4479	Open in IMG/M
3300030693\|Ga0302313_10054278	Not Available	1753	Open in IMG/M
3300030746\|Ga0302312_10051856	Not Available	1814	Open in IMG/M
3300031090\|Ga0265760_10034300	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
3300031258\|Ga0302318_10230755	Not Available	901	Open in IMG/M
3300031261\|Ga0302140_10784945	Not Available	682	Open in IMG/M
3300031708\|Ga0310686_103119617	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300031708\|Ga0310686_117913839	Not Available	1235	Open in IMG/M
3300031871\|Ga0316036_110661	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300032805\|Ga0335078_12031121	Not Available	614	Open in IMG/M
3300034282\|Ga0370492_0170581	Not Available	889	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.06%
Host-Associated	Host-Associated	1.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.70%
Aquatic	Environmental → Aquatic	21.36%
Plants	Host-Associated → Plants	1.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.17%
Freshwater	Environmental → Aquatic → Freshwater	17.48%
Peat	Environmental → Terrestrial → Peat	15.53%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.94%
Sediment	Environmental → Aquatic → Sediment	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.89%
Loam	Environmental → Terrestrial → Soil → Loam	20.39%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	17.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.53%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.88%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	15.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.53%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.88%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.91%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.68%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	10.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	9.71%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	9.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.80%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.88%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.91%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.94%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.94%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.97%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.97%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.97%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.97%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001175	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3	Environmental	Open in IMG/M
3300001634	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003370	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023019	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU1	Environmental	Open in IMG/M
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028010	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA6	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030693	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2	Environmental	Open in IMG/M
3300030746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_1	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031871	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12649J13570_10098371	3300001175	Forest Soil	LIIMILTGDNQSQHDLLGDASELFSHKEAVDQAVHASNFVELVAALNAPVR*
JGI12649J13570_10219671	3300001175	Forest Soil	IIMILTGDNQSQHDLLGDASALFSRKEAIERAVNAQTFVELVAALNAPVH*
JGI20245J16306_10022872	3300001634	Forest Soil	AKLIILILTGDNQSQHDLLLDAGELFSRKEAIEQALHAETFVELMAALNAPVH*
JGI25617J43924_103479531	3300002914	Grasslands Soil	GDNQSQQDLLGNASELFSRKEAVERALHASNFLELVAALNAPVQ*
JGI26337J50220_10346952	3300003370	Bog Forest Soil	LIIMILTADNQSQHDLLGDASELFSRKEAVDQAVNAKTFVELVAALNAPVQ*
Ga0062385_102410621	3300004080	Bog Forest Soil	RDGKPARLIILILTGDNQSQHDLLGDASELFSRKEAVDRAVNASSFLELVAALNAPVR*
Ga0062385_104222122	3300004080	Bog Forest Soil	GDNQSQHDLLLDAGELFRHKEAIDQALHAETFVELMAAFNAPVH*
Ga0062385_108238761	3300004080	Bog Forest Soil	RLIILILTGDNQSQHDLLGDAGELFERKEAIDQALSADTFLELVAALNAPVK*
Ga0062385_109359892	3300004080	Bog Forest Soil	IILILTEDNQSQHDLLGDASELFSRKEAVERAVNASSFLELVAALNAPVR*
Ga0062385_109597551	3300004080	Bog Forest Soil	LTPDNPSQHDLLADAGQLFSQKEVVDRTLAATSFTELVAVLNAPVK*
Ga0062389_1031981031	3300004092	Bog Forest Soil	SRLIILILTGDNQSQHDLLGDAGELFERKEAIDQALSADTFLELVAALNAPVK*
Ga0058899_102406172	3300004631	Forest Soil	ARDGKLAKLIVLILTGDNQSQHDLLGDASELFSRKEAIDNALRATSFVELGAALNAPVQ*
Ga0058899_106022711	3300004631	Forest Soil	RLIIMILTGDNQSQHDLLGDASELFSRKEAVDRAVHANTFLELVAALNAPVQ*
Ga0070734_104818942	3300005533	Surface Soil	AKLIVLILTPDNQSQHDLLADAGQLFSHKEMIDRALAASSFVELLAALNAPVK*
Ga0070762_107784242	3300005602	Soil	NQSQQDLLGDASELFGHSEAVDQAVTATTFMEFVAALNAPVQ*
Ga0070763_107811062	3300005610	Soil	DGRPARLIVMVLTGDNQSQHDLLRNAGELFSRKEAIEQALNAQTFVELVAALNAPVS*
Ga0070763_108389562	3300005610	Soil	GDNQSQHDLLYDAGELFSRREAIEQALHAQTFTELVAALNAPVH*
Ga0070766_102233233	3300005921	Soil	IMILTGDNQSQHDLLGDASELFSNKEAVERAVNAKSFLELGAALNAPVQ*
Ga0070766_102798431	3300005921	Soil	RPARLIVLILTPDNQSQHDLLADAGQLFSQKEMVDRALAANSFVELAAALNAPVK*
Ga0070766_108940481	3300005921	Soil	ILTGDNQSQHDLLRNAGELFSRKEAIEQTLNAQSFVELVAALNAPVS*
Ga0075014_1003514192	3300006174	Watersheds	LIVMILTGDHQSQHDLLSDAGELFSRKEAIEQALNADTFLELIAALNAPVK*
Ga0070765_1017438722	3300006176	Soil	ARDGKPARLIILILTGDNQSQHDLLYDAGELFSRREAIEQALHAQTFTELVAALNAPVH*
Ga0099792_104334012	3300009143	Vadose Zone Soil	VFTVIRDECKSQQDLLGNASELFSRKEAVERAVHAGNFLELAAALNAPVQ*
Ga0116222_15028792	3300009521	Peatlands Soil	RLIVLILTPDTQSQHDLLAQAGQLFSRKEIVDRMLAANSFVELVAALNAPVK*
Ga0116129_11134442	3300009633	Peatland	MILTGDNQSQHDLLGDASALFSRKEAIERAVNAQTFVELVAALNAPVH*
Ga0074044_107761032	3300010343	Bog Forest Soil	LILTGDNQSQHDLLGDASELFSHKEAVDRAVDAKNFMELVAALNAPVQ*
Ga0137392_104072361	3300011269	Vadose Zone Soil	ILILTGDNQSQQDLLGNASELFSRKEAVDRAVNASSFLELVAALNAPVH*
Ga0137377_116138661	3300012211	Vadose Zone Soil	GKPARLVVLILTGDSRHQHDLLGDASEVVQHKEAIDRAAIAASFVELVAALNAPVQ*
Ga0137361_102267083	3300012362	Vadose Zone Soil	IILILTGDNQSQQDLLGDASELFSRREAVDRAVNASTFLELAAALNAPVH*
Ga0137358_102948481	3300012582	Vadose Zone Soil	LTGDNQSQQDLLGDASELFSRKEAVERAVHANNFLELVAALNAPVQ*
Ga0137397_104963452	3300012685	Vadose Zone Soil	LVVLILTGDSRPQHDLLGDASEVVQHKEAIDRAATATSVVELVAALNAPVQ*
Ga0137413_101985532	3300012924	Vadose Zone Soil	VFTVIRDECKSQQDLLGNASELFSRKEAVERAVHASNFLELAAALNAPVQ*
Ga0181523_102062303	3300014165	Bog	IIMILTGDNQSQHDLLGDASEHFSHKEAVERAVHAASFVELMAALNAPVR*
Ga0181537_103718252	3300014201	Bog	FNARDGKLSRLIILILTGDNQSQHDLLGNAEEMFSRKEAIDQVLEAATFVELVAALNAPVK*
Ga0187782_105227502	3300017975	Tropical Peatland	DARDGKLTRLIFLILTGDNQSQDDLLRDAGELFGRREALEQAMGATTFVELVAALNAPVD
Ga0187881_101780242	3300018024	Peatland	FDGRDGKPARLIILILTGDNQSQHDLLLDAGELFSRKEAIDQALHAETFVELVAALNAPV
Ga0187869_105364021	3300018030	Peatland	IMLILTGDNQSQHDLLGDASELFSHKEAVDRAVDAKNFVELVAALNAPVQ
Ga0187863_100467173	3300018034	Peatland	GDNQSQHDLLGDASELFSRKEAVERAVSANSFLELVAALNAPVQ
Ga0187855_105783092	3300018038	Peatland	LILTPDNQSQHDLLGDASELFSRSDAIFQALGASSFIELVAALKAPVT
Ga0210401_100202377	3300020583	Soil	ILTSDHQSQHDLLSDAGELFSRKEAIEQALSAETFIELVAALNAPVK
Ga0210400_102080121	3300021170	Soil	IVMILTGDNRSQHDLLGDASELFSRREAIDNMLKATTFMELVAALNAPVQ
Ga0210388_104946631	3300021181	Soil	GKLARLIILILTGDNQSQHDLLLDAGELFSRKEAIEQALHAETFVELVAALNAPVH
Ga0210388_109714061	3300021181	Soil	GRPARLIVLILTPDIRSQQDLLAGAGQLFSQKEMVDRALAANSFVELLAALNAPVK
Ga0210385_102792341	3300021402	Soil	LILTPDSQSQQDLLGDASELFAHKEAVERAVNANNFLELVAALNAPVQ
Ga0210397_115706162	3300021403	Soil	ADNQSQQDLLGDASELFGHSEAVDQAVTATTFMEFVAALNAPVQ
Ga0210387_102630532	3300021405	Soil	KPARLIILILTGDNQSQHDLLLDAGELFSRKEAIEQALHADTFVELMAAFNAPVH
Ga0210386_101452151	3300021406	Soil	VLILTGDNQSQHDLLRNAGELFSHKEAIEQTLNAQTFVELVAALNAPVD
Ga0210386_116347861	3300021406	Soil	KPARLIILILTGDNQSQHDLLYDAGELFSRREAIEQALHAQTFTELVAALNAPVH
Ga0210383_114530151	3300021407	Soil	GDNQSQHDLLLDAGQLFSRKEAIEQALNAENFVELMAALNAPVH
Ga0210394_115856341	3300021420	Soil	IILILTGDNQSQHDLLGDASERFLHVEAIDRALAAKSFVELIAALNAPVH
Ga0210384_118009161	3300021432	Soil	RLIILILTGDNQSQHDLLLDAGELFSRKEAVEQALHAETFVELMAALNAPVH
Ga0210390_107200681	3300021474	Soil	ILILTPDSQSQQELLAEAGQLFSRKEMVDRALAANTFVELVAALNAPVK
Ga0210398_101495172	3300021477	Soil	RLIVMILTGDNQSQHDLLRNAGELFSRKEAIEQTLNAQSFVELVAALNAPVS
Ga0210398_109670862	3300021477	Soil	DGKPSRLIVLILTGDNQSQHDLLGDAGEMFSRKEAIDQVLSAGSYLELVAALNAPVK
Ga0210410_106624492	3300021479	Soil	RLIILILTGDNQSQQDLLADASELFSRKEAVDRAVNATNFLELVAALNAPVR
Ga0210409_112597852	3300021559	Soil	ARDGKLTKLIILILTGDNQSQNDLLLDAAELFSRKEAIEQALNAETFVELMAALNAPVH
Ga0212123_100167231	3300022557	Iron-Sulfur Acid Spring	RDGKSSRLIILILTGDNQSQHDLLGDAGEMFNGKEAIDQVLNAASFLELVAALNAPVK
Ga0212123_101827062	3300022557	Iron-Sulfur Acid Spring	LILTGDNQSQHDLLGDAGELFERKEAIDQALSAATFLELVAALNAPVK
Ga0212123_104399671	3300022557	Iron-Sulfur Acid Spring	KPSRLIILILTGDNQSQHDLLGDAGEMFRSKEAIEQLLDANTFVELVAALNAPVK
Ga0242657_10648011	3300022722	Soil	DNQSQQDLLGDASELFGHSEAVDQAVTATTFMEFVAALNAPVQ
Ga0242654_101974761	3300022726	Soil	AKLIVMILTGDNRSQHDLLGDASELFSRREAIDNMLKATTFMELVAALNAPVQ
Ga0224560_1139112	3300023019	Soil	LTGDNQSQHDLLGDASELFSRKEAVDQAINASTFLELVAALNAPVR
Ga0224561_10182992	3300023030	Soil	KPARLIILILTGDNQSQYDLLLDAGELFSRKEAIEQALHAETFVELMAALNAPVH
Ga0224572_11086582	3300024225	Rhizosphere	MILTGDNQSQHDLLGDASELFSHKEAVDQAVQATNFVELVAALNAPVR
Ga0224564_10151963	3300024271	Soil	MILTGDNQSQHDLLGDASELFSRKEAVDQAINASSFLELVAALNAPVR
Ga0208194_10267322	3300025412	Peatland	DNQSQHDLLGDASELFSHKEAVDRAVDAKNFVELVAALNAPVQ
Ga0209648_102626391	3300026551	Grasslands Soil	TGDNKSQQDLLGDASELFSRKEAVDRAVNASTFLELAAALNAPVH
Ga0209525_11165511	3300027575	Forest Soil	LAKLIILILTGDNQSQHDLLLDAGELFSRKEAIEQALHAETFVELMAALNAPVH
Ga0209625_10304303	3300027635	Forest Soil	RPAKLIVLILTSDHQSQHDLLSDAGELFSRKEAIEQALSAETFIELVAALNAPVK
Ga0209038_101857361	3300027737	Bog Forest Soil	RDGKLSRLIILILTGDNQSQHDLLGNAEEMFSRKEAIDQVLEAATFVELVAALNAPVK
Ga0209655_100585354	3300027767	Bog Forest Soil	RLIILILTGDNQSQHDLLGNAEEMFSRKEAIDQVLEAATFLELVAALNAPVK
Ga0209655_102066982	3300027767	Bog Forest Soil	GRPARLIVMILTGDNQSQHDLLRNAGELFGRKEAIEQTLNAHTFVELVAALNAPVH
Ga0209693_102367371	3300027855	Soil	DGKLARLIILILTGDNQSQHDLLLDAGELFSRKEAVEQALHAETFVELMAALNAPVH
Ga0209275_105269692	3300027884	Soil	RLIIMILTADNQSQQDLLGDASELFGHSEAVDQAVTATTFMEFVAALNAPVQ
Ga0209624_105762511	3300027895	Forest Soil	LILTGDNQSQQDLLADASELFSRKEAIEQAVNATNFLELAAALNAPVQ
Ga0209488_100258992	3300027903	Vadose Zone Soil	VFTVIRDECKSQQDLLGNASELFSRKEAVERAVHAGNFLELAAALNAPVQ
Ga0209006_109488422	3300027908	Forest Soil	ILTGDNQSQHDLLRNAGELFSRKEAIEQTLNAQSFVELVAALNAPVN
Ga0209006_114533102	3300027908	Forest Soil	KPARLIVLILTPDNQSQHDLLGDASELFSGPDAILQALGASSFIELVAALKAPVT
Ga0265358_1007921	3300028010	Rhizosphere	ILILTGDNQSQHDLLLDAGELFSRKEAIEQALHAETFVELVAALNAPVH
Ga0209526_105421471	3300028047	Forest Soil	DGKPARLIVLILTGDNQSQQDLLGDASELFSRKEAVDRAVNAKTFLELVAALNAPVQ
Ga0302231_103558271	3300028775	Palsa	DGKLSRLIILILTGDNQAQHDLLGDAGEMFSRKEAIDQVLEASTFVELVAALNAPVK
Ga0302221_104812491	3300028806	Palsa	LIIMILTADNQSQQDLLGDASELFAHREAVDQAVNATTFMELVAALNAPVK
Ga0302197_103384721	3300028873	Bog	RLIIMILTGDNQSQHDLLGDASELFSNKEAVERAVNAKSFLELAAALNAPVQ
Ga0308309_104352814	3300028906	Soil	KLIVLILTPDIRSQQDLLAGAGQLFSQKEMVDRALAANSFVELLAALNAPVK
Ga0302200_104042082	3300028909	Bog	IMILTGDNQSQHDLLGDASELFSHEEAVDQAVHASNFVELVAALNAPVR
Ga0302200_104647871	3300028909	Bog	DGKPARLIILILAGDNRSQHDLLGDASELFSRKEAVDRAVNASTFLELVAALNAPVQ
Ga0311368_100763491	3300029882	Palsa	KLSRLIILILTGDNQAQHDLLGDAGEMFSRKEAIDQVLEASTFVELVAALNAPVK
Ga0311352_111521522	3300029944	Palsa	RLIVMILTPDNQSQHDLLAEAGQLFSQKEMVDRTLAANTFVELMAALNAPVK
Ga0311339_113153832	3300029999	Palsa	DGKPARLIVMILTGDNQSQRDLLGDASELFSHKEAVEGAVKAASFVELVAALNAPVQ
Ga0302179_102767162	3300030058	Palsa	TGDNQSQHDLLGDASELFSNKEAVERAVNAKSFLELAAALNAPVQ
Ga0311353_112737071	3300030399	Palsa	IVMILTGDNQSQNDLLGDASELFSQKEAVDRAVAAANFVELVAALNAPVQ
Ga0311370_106633422	3300030503	Palsa	LIVMILTGDNQSQNDLLGDASELFSQKEAVDRAVAAANFVELVAALNAPVQ
Ga0311357_100460036	3300030524	Palsa	ARLIIMILTGDNQSQHDLLGDASELFSQREAVERVVKAKNFVELVAALNAPVQ
Ga0302313_100542781	3300030693	Palsa	GRVARLIVMILTGDNQSQHDLLRNAGELFSRKEAIEQTLNAQSFVELVAALNAPVS
Ga0302312_100518562	3300030746	Palsa	RDGRVARLIVMILTGDNQSQHDLLRNAGELFSRKEAIEQTLNAQSFVELVAALNAPVS
Ga0265760_100343001	3300031090	Soil	RDGKPARLIILILTGDNQSQHDLLLDAGELFSRKEAIDQALHAETFVELMAALNAPVH
Ga0302318_102307551	3300031258	Bog	ILAGDNRSQHDLLGDASVLFSRKEAVDRAVNASTFLELVAALNAPVQ
Ga0302140_107849452	3300031261	Bog	ILILTGDNQSQHDLLGDASELFSHREAVDQAVNATSFLELVAALNAPVQ
Ga0310686_1031196172	3300031708	Soil	RDGKPARLIILILTGDNQSQQDLLGDASELFSRKEAVEQAVHASSFLELVAALNAPVQ
Ga0310686_1179138391	3300031708	Soil	LIVLILTPDNQSQQDLLADAGQLFSHKEMIDRTLAANSFVELVAALNAPVK
Ga0316036_1106613	3300031871	Soil	ARLIVMILTGDNQSQHDLLADASELFSHKEAVDRAVHAANFVELVAALNAPVS
Ga0335078_120311211	3300032805	Soil	PARLIVLILTPNNTAQHDLLADAGHLFSQKEMVDRTLAANSFVELVAALNAPVR
Ga0370492_0170581_3_134	3300034282	Untreated Peat Soil	DNQSQRDLLGDASELFSHKEAVEGAVKAASFVELVAALNAPVQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099692

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences