Basic Information | |
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Family ID | F099710 |
Family Type | Metagenome |
Number of Sequences | 103 |
Average Sequence Length | 90 residues |
Representative Sequence | MAIRECQVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEDLTVDIKTTTSHKVPFFKLKAWLESSGRDPREAALKSKLR |
Number of Associated Samples | 77 |
Number of Associated Scaffolds | 103 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 22.33 % |
% of genes near scaffold ends (potentially truncated) | 25.24 % |
% of genes from short scaffolds (< 2000 bps) | 83.50 % |
Associated GOLD sequencing projects | 63 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.55 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (66.019 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere (12.621 % of family members) |
Environment Ontology (ENVO) | Unclassified (70.874 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (71.845 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 31.36% β-sheet: 19.49% Coil/Unstructured: 49.15% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.55 |
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Pfam ID | Name | % Frequency in 103 Family Scaffolds |
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PF04679 | DNA_ligase_A_C | 13.59 |
PF08239 | SH3_3 | 7.77 |
PF03060 | NMO | 2.91 |
PF00293 | NUDIX | 1.94 |
PF01161 | PBP | 1.94 |
PF02321 | OEP | 1.94 |
PF02735 | Ku | 1.94 |
PF03807 | F420_oxidored | 1.94 |
PF13419 | HAD_2 | 1.94 |
PF00756 | Esterase | 0.97 |
PF04357 | TamB | 0.97 |
PF00282 | Pyridoxal_deC | 0.97 |
PF00440 | TetR_N | 0.97 |
PF13620 | CarboxypepD_reg | 0.97 |
PF14255 | Cys_rich_CPXG | 0.97 |
PF02371 | Transposase_20 | 0.97 |
PF01694 | Rhomboid | 0.97 |
PF00355 | Rieske | 0.97 |
PF10091 | Glycoamylase | 0.97 |
PF01551 | Peptidase_M23 | 0.97 |
PF00593 | TonB_dep_Rec | 0.97 |
PF00916 | Sulfate_transp | 0.97 |
PF01425 | Amidase | 0.97 |
COG ID | Name | Functional Category | % Frequency in 103 Family Scaffolds |
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COG1793 | ATP-dependent DNA ligase | Replication, recombination and repair [L] | 13.59 |
COG1538 | Outer membrane protein TolC | Cell wall/membrane/envelope biogenesis [M] | 3.88 |
COG0516 | IMP dehydrogenase/GMP reductase | Nucleotide transport and metabolism [F] | 2.91 |
COG2070 | NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family | General function prediction only [R] | 2.91 |
COG1273 | Non-homologous end joining protein Ku, dsDNA break repair | Replication, recombination and repair [L] | 1.94 |
COG1881 | Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family | General function prediction only [R] | 1.94 |
COG0076 | Glutamate or tyrosine decarboxylase or a related PLP-dependent protein | Amino acid transport and metabolism [E] | 0.97 |
COG0154 | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase | Translation, ribosomal structure and biogenesis [J] | 0.97 |
COG0659 | Sulfate permease or related transporter, MFS superfamily | Inorganic ion transport and metabolism [P] | 0.97 |
COG0705 | Membrane-associated serine protease, rhomboid family | Posttranslational modification, protein turnover, chaperones [O] | 0.97 |
COG2233 | Xanthine/uracil permease | Nucleotide transport and metabolism [F] | 0.97 |
COG2252 | Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family | Nucleotide transport and metabolism [F] | 0.97 |
COG2911 | Phospholipid transport to the outer membrane protein TamB | Cell wall/membrane/envelope biogenesis [M] | 0.97 |
COG3547 | Transposase | Mobilome: prophages, transposons [X] | 0.97 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 66.99 % |
Unclassified | root | N/A | 33.01 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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2170459010|GIO7OMY02HF1DH | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus | 509 | Open in IMG/M |
2199352024|deeps__Contig_156248 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1861 | Open in IMG/M |
3300004153|Ga0063455_101030741 | Not Available | 599 | Open in IMG/M |
3300005183|Ga0068993_10206784 | Not Available | 684 | Open in IMG/M |
3300005327|Ga0070658_10433561 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 1131 | Open in IMG/M |
3300005339|Ga0070660_101203015 | All Organisms → cellular organisms → Bacteria | 642 | Open in IMG/M |
3300005355|Ga0070671_100396638 | All Organisms → cellular organisms → Bacteria | 1180 | Open in IMG/M |
3300005355|Ga0070671_100467205 | Not Available | 1083 | Open in IMG/M |
3300005439|Ga0070711_101207257 | All Organisms → cellular organisms → Bacteria | 654 | Open in IMG/M |
3300005439|Ga0070711_101299087 | Not Available | 631 | Open in IMG/M |
3300005534|Ga0070735_10127333 | All Organisms → cellular organisms → Bacteria | 1588 | Open in IMG/M |
3300005548|Ga0070665_100023403 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 6219 | Open in IMG/M |
3300005563|Ga0068855_100067393 | All Organisms → cellular organisms → Bacteria | 4170 | Open in IMG/M |
3300005842|Ga0068858_100738525 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 959 | Open in IMG/M |
3300005843|Ga0068860_101176494 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 787 | Open in IMG/M |
3300005994|Ga0066789_10166721 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli | 933 | Open in IMG/M |
3300006041|Ga0075023_100199762 | All Organisms → cellular organisms → Bacteria | 770 | Open in IMG/M |
3300006055|Ga0097691_1119693 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 738 | Open in IMG/M |
3300006057|Ga0075026_100033320 | All Organisms → cellular organisms → Bacteria | 2363 | Open in IMG/M |
3300006173|Ga0070716_101645449 | Not Available | 528 | Open in IMG/M |
3300006175|Ga0070712_101979556 | All Organisms → cellular organisms → Bacteria | 510 | Open in IMG/M |
3300006237|Ga0097621_100097628 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 2467 | Open in IMG/M |
3300006237|Ga0097621_100206633 | All Organisms → cellular organisms → Bacteria | 1706 | Open in IMG/M |
3300006354|Ga0075021_10211426 | All Organisms → cellular organisms → Bacteria | 1186 | Open in IMG/M |
3300006358|Ga0068871_101929836 | Not Available | 561 | Open in IMG/M |
3300006638|Ga0075522_10294679 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans | 788 | Open in IMG/M |
3300009093|Ga0105240_11895645 | Not Available | 620 | Open in IMG/M |
3300009098|Ga0105245_10037699 | All Organisms → cellular organisms → Bacteria | 4298 | Open in IMG/M |
3300009098|Ga0105245_13168825 | Not Available | 510 | Open in IMG/M |
3300009143|Ga0099792_10752953 | Not Available | 634 | Open in IMG/M |
3300009143|Ga0099792_11200472 | Not Available | 515 | Open in IMG/M |
3300009174|Ga0105241_10360209 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli | 1265 | Open in IMG/M |
3300009174|Ga0105241_12054061 | Not Available | 564 | Open in IMG/M |
3300009176|Ga0105242_12053373 | Not Available | 615 | Open in IMG/M |
3300009177|Ga0105248_10881228 | All Organisms → Viruses → Predicted Viral | 1010 | Open in IMG/M |
3300009177|Ga0105248_11148451 | Not Available | 878 | Open in IMG/M |
3300009177|Ga0105248_12334376 | Not Available | 609 | Open in IMG/M |
3300009177|Ga0105248_12351788 | Not Available | 607 | Open in IMG/M |
3300009177|Ga0105248_12853327 | Not Available | 551 | Open in IMG/M |
3300009551|Ga0105238_10355588 | Not Available | 1454 | Open in IMG/M |
3300009551|Ga0105238_10811350 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 951 | Open in IMG/M |
3300009553|Ga0105249_12022437 | Not Available | 649 | Open in IMG/M |
3300010341|Ga0074045_10049235 | Not Available | 3060 | Open in IMG/M |
3300010375|Ga0105239_10865742 | Not Available | 1037 | Open in IMG/M |
3300010375|Ga0105239_12480889 | Not Available | 604 | Open in IMG/M |
3300010400|Ga0134122_12370831 | Not Available | 577 | Open in IMG/M |
3300012200|Ga0137382_10708730 | All Organisms → cellular organisms → Bacteria | 721 | Open in IMG/M |
3300012922|Ga0137394_11317018 | Not Available | 585 | Open in IMG/M |
3300013104|Ga0157370_10170264 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 2025 | Open in IMG/M |
3300013105|Ga0157369_11722680 | Not Available | 637 | Open in IMG/M |
3300013296|Ga0157374_10236711 | All Organisms → cellular organisms → Bacteria | 1795 | Open in IMG/M |
3300013296|Ga0157374_12361115 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 559 | Open in IMG/M |
3300013296|Ga0157374_12943049 | Not Available | 503 | Open in IMG/M |
3300013297|Ga0157378_10339121 | All Organisms → cellular organisms → Bacteria | 1465 | Open in IMG/M |
3300013306|Ga0163162_10074294 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 3458 | Open in IMG/M |
3300013306|Ga0163162_10273277 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus | 1822 | Open in IMG/M |
3300013306|Ga0163162_10927631 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 983 | Open in IMG/M |
3300013307|Ga0157372_10910168 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis | 1020 | Open in IMG/M |
3300013307|Ga0157372_11712884 | All Organisms → cellular organisms → Bacteria | 723 | Open in IMG/M |
3300013307|Ga0157372_11724908 | Not Available | 720 | Open in IMG/M |
3300013308|Ga0157375_10018508 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus | 6319 | Open in IMG/M |
3300013308|Ga0157375_11435769 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus | 813 | Open in IMG/M |
3300014968|Ga0157379_10146495 | Not Available | 2129 | Open in IMG/M |
3300015063|Ga0167649_100516 | All Organisms → cellular organisms → Bacteria | 5744 | Open in IMG/M |
3300015203|Ga0167650_1010666 | All Organisms → cellular organisms → Bacteria | 2631 | Open in IMG/M |
3300015242|Ga0137412_10245831 | All Organisms → cellular organisms → Bacteria | 1417 | Open in IMG/M |
3300015371|Ga0132258_11368586 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1788 | Open in IMG/M |
3300017927|Ga0187824_10261226 | Not Available | 603 | Open in IMG/M |
3300017955|Ga0187817_10182412 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus | 1336 | Open in IMG/M |
3300021432|Ga0210384_10397937 | All Organisms → cellular organisms → Bacteria | 1241 | Open in IMG/M |
3300021478|Ga0210402_10267843 | All Organisms → cellular organisms → Bacteria | 1579 | Open in IMG/M |
3300025862|Ga0209483_1110012 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans | 1193 | Open in IMG/M |
3300025900|Ga0207710_10176274 | All Organisms → cellular organisms → Bacteria | 1047 | Open in IMG/M |
3300025909|Ga0207705_10361779 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1119 | Open in IMG/M |
3300025911|Ga0207654_10058114 | All Organisms → cellular organisms → Bacteria | 2250 | Open in IMG/M |
3300025911|Ga0207654_10133533 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1574 | Open in IMG/M |
3300025911|Ga0207654_10845243 | All Organisms → cellular organisms → Bacteria | 662 | Open in IMG/M |
3300025913|Ga0207695_10066749 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 3693 | Open in IMG/M |
3300025924|Ga0207694_11294818 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus | 616 | Open in IMG/M |
3300025924|Ga0207694_11563048 | Not Available | 556 | Open in IMG/M |
3300025927|Ga0207687_10244867 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus | 1423 | Open in IMG/M |
3300025931|Ga0207644_10279913 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1339 | Open in IMG/M |
3300025931|Ga0207644_10290478 | All Organisms → cellular organisms → Bacteria | 1315 | Open in IMG/M |
3300025934|Ga0207686_10053615 | All Organisms → cellular organisms → Bacteria | 2522 | Open in IMG/M |
3300025934|Ga0207686_10246559 | All Organisms → cellular organisms → Bacteria | 1303 | Open in IMG/M |
3300025935|Ga0207709_10349049 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus | 1116 | Open in IMG/M |
3300025935|Ga0207709_11298537 | All Organisms → cellular organisms → Bacteria | 601 | Open in IMG/M |
3300025941|Ga0207711_10482863 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis | 1154 | Open in IMG/M |
3300025941|Ga0207711_10836762 | Not Available | 857 | Open in IMG/M |
3300026023|Ga0207677_11515483 | All Organisms → cellular organisms → Bacteria | 619 | Open in IMG/M |
3300026035|Ga0207703_11141223 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus | 749 | Open in IMG/M |
3300026142|Ga0207698_11126361 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans | 798 | Open in IMG/M |
3300027894|Ga0209068_10040850 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 2329 | Open in IMG/M |
3300027903|Ga0209488_10985863 | Not Available | 585 | Open in IMG/M |
3300027908|Ga0209006_10925648 | Not Available | 698 | Open in IMG/M |
3300028379|Ga0268266_10095033 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 2617 | Open in IMG/M |
3300028802|Ga0307503_10779626 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus | 544 | Open in IMG/M |
3300029943|Ga0311340_11587780 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus | 509 | Open in IMG/M |
3300030943|Ga0311366_10587329 | Not Available | 969 | Open in IMG/M |
3300031231|Ga0170824_107835458 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 592 | Open in IMG/M |
3300031595|Ga0265313_10386221 | Not Available | 551 | Open in IMG/M |
3300031708|Ga0310686_113438388 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus | 783 | Open in IMG/M |
3300031754|Ga0307475_11186614 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 595 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 12.62% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 8.74% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 7.77% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 5.83% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 5.83% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 5.83% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 4.85% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 3.88% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 3.88% |
Arctic Peat Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil | 2.91% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.91% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.91% |
Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 2.91% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 2.91% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 1.94% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.94% |
Glacier Forefield Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil | 1.94% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 1.94% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.94% |
Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 0.97% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.97% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.97% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.97% |
Grass Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil | 0.97% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 0.97% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 0.97% |
Bog Forest Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil | 0.97% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil | 0.97% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.97% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 0.97% |
Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 0.97% |
Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 0.97% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.97% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 0.97% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.97% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere | 0.97% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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2170459010 | Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!) | Environmental | Open in IMG/M |
2199352024 | Bare-fallow DEEP SOIL | Environmental | Open in IMG/M |
3300004153 | Grasslands soil microbial communities from Hopland, California, USA (version 2) | Environmental | Open in IMG/M |
3300005183 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 | Environmental | Open in IMG/M |
3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Host-Associated | Open in IMG/M |
3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Host-Associated | Open in IMG/M |
3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Host-Associated | Open in IMG/M |
3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
3300005534 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 | Environmental | Open in IMG/M |
3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Host-Associated | Open in IMG/M |
3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Host-Associated | Open in IMG/M |
3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Host-Associated | Open in IMG/M |
3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
3300005994 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 | Environmental | Open in IMG/M |
3300006041 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 | Environmental | Open in IMG/M |
3300006055 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 | Environmental | Open in IMG/M |
3300006057 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012 | Environmental | Open in IMG/M |
3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) | Host-Associated | Open in IMG/M |
3300006354 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 | Environmental | Open in IMG/M |
3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Host-Associated | Open in IMG/M |
3300006638 | Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A | Environmental | Open in IMG/M |
3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Host-Associated | Open in IMG/M |
3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
3300009143 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 | Environmental | Open in IMG/M |
3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Host-Associated | Open in IMG/M |
3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300010341 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2 | Environmental | Open in IMG/M |
3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
3300012200 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG | Environmental | Open in IMG/M |
3300012922 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG | Environmental | Open in IMG/M |
3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Host-Associated | Open in IMG/M |
3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Host-Associated | Open in IMG/M |
3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Host-Associated | Open in IMG/M |
3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Host-Associated | Open in IMG/M |
3300015063 | Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3b, vegetated patch on medial moraine) | Environmental | Open in IMG/M |
3300015203 | Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine) | Environmental | Open in IMG/M |
3300015242 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300017927 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4 | Environmental | Open in IMG/M |
3300017955 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2 | Environmental | Open in IMG/M |
3300021432 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M | Environmental | Open in IMG/M |
3300021478 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M | Environmental | Open in IMG/M |
3300025862 | Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes) | Environmental | Open in IMG/M |
3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300027894 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes) | Environmental | Open in IMG/M |
3300027903 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes) | Environmental | Open in IMG/M |
3300027908 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes) | Environmental | Open in IMG/M |
3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300028802 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S | Environmental | Open in IMG/M |
3300029943 | I_Palsa_N3 coassembly | Environmental | Open in IMG/M |
3300030943 | III_Fen_N2 coassembly | Environmental | Open in IMG/M |
3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Host-Associated | Open in IMG/M |
3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
3300031754 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
F62_00355540 | 2170459010 | Grass Soil | MAIRECKVSFVDQRGVRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEDLTVDINTTTSHKVPLFKLKAWLESSGRDPREAALKSKLR |
deeps_02872930 | 2199352024 | Soil | MAIRECHVSFVDARGVRHSVTVYASSVLEAAAAGLKLIRETEMIEDESVLDLTVDLMTSTSHKVPLSRLKAWLESSGRDPREAATKTKLR |
Ga0063455_1010307411 | 3300004153 | Soil | MLFSLVCLFRECKVSFVDSRGIRHATKVQASSVLEAAAAGLKQIRDTAMIGDEGVLELTVEILSATSHSVPLSKLKAWLESAGRDPREAAMKARLR* |
Ga0068993_102067841 | 3300005183 | Natural And Restored Wetlands | MAVRECSVSFVDGRGGRHSTIVYASTVLEAAAAGLKQIRETEMLEDDGVLELTVDLTTTTSHQVPLTKLKAWLESSGRDPREAAMKNRLR* |
Ga0070658_104335612 | 3300005327 | Corn Rhizosphere | MAIRECQVSFIDQRGVRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEDLTVDIKTTTSHKVPLFKLKAWLESSGRDPREAALKSKLR* |
Ga0070660_1012030151 | 3300005339 | Corn Rhizosphere | MALRECQVSFVDQRRIRHSVAVYASAVLAATAAGLKQIRETEMIGEDGVEDLTVDIKIMTSHKVPFLKLKAWLEGS |
Ga0070671_1003966382 | 3300005355 | Switchgrass Rhizosphere | MAIRECQVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEDLTVDIKSTTSHKVPLFKLKAWLESSGRDPREAALKSKLR* |
Ga0070671_1004672052 | 3300005355 | Switchgrass Rhizosphere | MAIRDTELALSISAGVRHSVAVYAGSVLEAAATGLKQIRETEMIGDDGVEDLPVDIKTTTSHKVPLFKLKAWLESSGRDPREAAVKAKLK* |
Ga0070711_1012072571 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MTIRECHVSFVDGRGVRHSVAVYASSVLEAAATGLKQMRETEMIEDEGVLDLTVDLTTTTSHKVPLSKLKSWIESGGRDPRDAAMKAKLR* |
Ga0070711_1012990871 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | RRGGEETAKLLTYLSMAIRECQVSFIDQRGIRHSVAVYAGSVLEAAAAGLKQIRETEMIGDDGVEDLTVDIQSTTSHKVPLFKLKAWLESSGRDPREAALKSKLR* |
Ga0070735_101273331 | 3300005534 | Surface Soil | AMFWRRRSFYHFFSNCTRASSNDSEEKANMLACFLMAIRECQVSFLDQRGIRHSVAVYAGSVLEAAAAGLKQIRETEMIGDEGVEDLTVDINTTTSHKVPFFKLKAWLESSGRDPREAAVKAKLR* |
Ga0070665_1000234035 | 3300005548 | Switchgrass Rhizosphere | MRFRWRFKNGKVNFVDQRGIRHSVAVYTSTVLEAAAAGLKQIRETEMIGDEGVENLTVDINTTTSHTIPFLKLKAWLESSGRDPREAALKSKVR* |
Ga0068855_1000673932 | 3300005563 | Corn Rhizosphere | MALRECQVSFVDQRRIRHSVAVYASAVLAATAAGLKQIRETEMIGEDGVEDLTVDIKIMTSHKVPFLKLKAWLEGSYRSPREAALKTKLR* |
Ga0068858_1007385252 | 3300005842 | Switchgrass Rhizosphere | MAIRECQVSFVDQRGIRYSVAVYASTVLEAAAAGLKQIRESEMIGEDGVEDLTVEIRTTTSHKVPFLKLKAWLESSGRSPREAALKSKLR* |
Ga0068860_1011764942 | 3300005843 | Switchgrass Rhizosphere | MAIRECQVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEDLTVDIRTTTSHKVPFFKLKAWLES |
Ga0066789_101667211 | 3300005994 | Soil | LGQYRHPLTFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEDLTVDIKTTTSHKVPFFKLKAWLESSGRDPREAALKSKLR* |
Ga0075023_1001997622 | 3300006041 | Watersheds | MAIRECQVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEDLTVDIKTTTSHKVPFFKLKAWLESSGRDPREAALKSKLR* |
Ga0097691_11196932 | 3300006055 | Arctic Peat Soil | MAIRECQVSFIDQRGIRHSVAVYASTVLEAAAAGLKQIREIEMIGEEGVEDLTVDIKTMTSHKVPFLRLKAWLESSGRSPREAALKSKLR* |
Ga0075026_1000333203 | 3300006057 | Watersheds | MAIRECQVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEDLTVDIKTTNSHKVPFFKLKAWLESSGRDPREAALKSKLR* |
Ga0070716_1016454491 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | KRLQAGDQSRGGEETAKLLNYLSMAIRECQVSFIDQRGIRHSVAVYAGSVLEAAAAGLKQIRETEMIGDDGVEDLTVDIQSTTSHKVPLFKLKAWLESSGRDPREAALKSKLR* |
Ga0070712_1019795562 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MTIRECHVSFVDGRGVRHSVAVYASSVLEAASTGLKQMRETEMIEDEGVLDLTVDLTTTTSHKVPLSKLKSWIESGGRDPRDAAMKA |
Ga0097621_1000976282 | 3300006237 | Miscanthus Rhizosphere | MPICECQVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEGLKVDIKTTTSHKVPFFKLKAWLEGNGRDPREAALKSKLR* |
Ga0097621_1002066333 | 3300006237 | Miscanthus Rhizosphere | MAIRECQVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEDLTVDIKTTTSHKVPFFKLKAWLESSGRDPREAATKAKLR* |
Ga0075021_102114262 | 3300006354 | Watersheds | MAIRECQVSFVDQRGIRHSVTVYASTVLEAAAAGLKQIRETEMIGDDGVENLTVDINTTTSHAVPLFKLKAWLESSGRDPREAALKSKLK* |
Ga0068871_1019298361 | 3300006358 | Miscanthus Rhizosphere | MAVRECQVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEDLTVDINTTTSHKVPLFKLKAWLESSGRDPREAALKSKLR* |
Ga0075522_102946792 | 3300006638 | Arctic Peat Soil | MAIRECQVSFVDQRGIRHSVAVYAGSVLEAAAAGLKQIRETEMIGDEGVEDLTVDIKTTTSHKVPLFKLEAWLQSSGRDPREAALKSKLR* |
Ga0105240_118956452 | 3300009093 | Corn Rhizosphere | MPSELVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEIIGDDGVEDLRVDIKTTTSHKVPLFKLKAWLQSSGHDSREAALKSKLR* |
Ga0105245_100376993 | 3300009098 | Miscanthus Rhizosphere | MAIRECQVSFIDQRGIRHSVAVYASTVLEAAAVGLKQIRETEMIGDDGVEDLTVDIKTTTSHKVPLFKLKAWLESSGRDPREAALKSKLR* |
Ga0105245_131688251 | 3300009098 | Miscanthus Rhizosphere | MLAYGSMAIRECRVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGDEGVENLTVDINPTTSHTVPLFKLKAWLESSGRDPREAALKAKLR* |
Ga0099792_107529532 | 3300009143 | Vadose Zone Soil | MAIRECQVSFIDQRGIRHSVAVYAGSVLEAAAAGLKQIRETEMIGDDGVEDLTVDIQSTTSHKVPLFKLKAWLESSGRDPREAALKSKLR* |
Ga0099792_112004722 | 3300009143 | Vadose Zone Soil | MAIRECKVSFVDQRGIRHSVAVYASTVLEAAAADLKQIRETEMIGDDGVEDLTVDIKTTTTHKVPLFKLKAWL |
Ga0105241_103602092 | 3300009174 | Corn Rhizosphere | MALRECQVSFVDQRRIRHSVAVYASAVLAATAAGLKQIRETEMIGEDGVEDLTVDIKIMTSHKVPFLKLKAWLEGSDRSPREAALKTKLR* |
Ga0105241_120540611 | 3300009174 | Corn Rhizosphere | MAVRECQVSFVDQRGVRHSVAVYAGSVLEAAATGLKQIRETEMIGDDGVEDLTVDINTTTSHKVPLFKLKAWLESSGRDPSEAALKSKLR* |
Ga0105242_120533731 | 3300009176 | Miscanthus Rhizosphere | MAVRECQVSFVDQRGVRHSVAVYAGCVLEAAAAGLKQIRETEMIGDDGVEDLTVDIKSTTTHKVPLFKLKAWLESSGRDPREAALKSKLR* |
Ga0105248_108812282 | 3300009177 | Switchgrass Rhizosphere | MCSIIRHSVSVYASTVLEAAAAGLKQIPETEMLADNGVDELIVDIKTTTSHKVPHFKLKAWLESSGGDPREAALKSKLR* |
Ga0105248_111484511 | 3300009177 | Switchgrass Rhizosphere | HSTAVYAGSVLEAAALGLKHIQETDMVGDDGVLELTVDLTSTTTHRVPLSKLKAWLESSGRDPREAAMKAKLR* |
Ga0105248_123343762 | 3300009177 | Switchgrass Rhizosphere | MAIRECQVSFVDQRGIRHSVTVYAGSVLEAAAAGLKQIRETEMIGDEGVEDLTVGIKSTTSHKVPFFKLKAWLESSGRDPREAALKAKFR* |
Ga0105248_123517881 | 3300009177 | Switchgrass Rhizosphere | MRFRWRFESGKVNFVDQRGIRHSVAVYTSTVLEAAAAGLKQIRETEMIGDEGVKNLTVDINTTTSHTVPFLKLKAWLESSGRDPREAALKSKLR* |
Ga0105248_128533272 | 3300009177 | Switchgrass Rhizosphere | MPVRECTVSFIDTRGARHSTSVHAGSVLEAAALGLKQIRETEMVSDEGVLELTVDLAITTSHRVPLSKLKGWLESSGRDPREAAMKAKLRD* |
Ga0105238_103555881 | 3300009551 | Corn Rhizosphere | MAVRECTVSFVDTRGIRHTTTVHATTVLEAAAVGLKQIRETEMVSDEGVLELTVELTTTTSHHVPLSKLKNWLASSGRDPREAAMKPKLREEMNGAPTVK* |
Ga0105238_108113502 | 3300009551 | Corn Rhizosphere | MAIRECQVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGEDGVEDLTVDIKTMTSHKVPFLKLKAWLQSSGRDPREAALKSKLR* |
Ga0105249_120224371 | 3300009553 | Switchgrass Rhizosphere | MPICECQVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEGLKVDIKTTTSHKVPFFKLKAWLEGNGRDPREADLKSKLR* |
Ga0074045_100492352 | 3300010341 | Bog Forest Soil | MPVRECKMSFVDARGVRHSVSVYAGSVLEAAAAGLKQIRETEMIEDDGVLDLTVDLVTTTSHKISLSQLKAWLESNGRDPREAVVKTKLR* |
Ga0105239_108657421 | 3300010375 | Corn Rhizosphere | MAVRECTVSFVDTRGIRHTTTVHATTVLEAAAVGLKQIRETEMVSDEGVLELTVDLTTTTSHHVPLSKLKAWLASSGRDPREAAMK |
Ga0105239_124808891 | 3300010375 | Corn Rhizosphere | MVSMAIRECKVCFVDQRGIRHSVAVFASTVLEAAAAGLKQIRETEMVGDEGVEDLTVDIKTTTSHKVPLSKLKAWLESSGRDPREAA |
Ga0134122_123708312 | 3300010400 | Terrestrial Soil | MAIRECQVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEDLTVDIKTTTSRKVPLFKLKAWLESSGRDP |
Ga0137382_107087302 | 3300012200 | Vadose Zone Soil | MAIRECQVSFVDQRGVRHSVAVYASTVLEAAAAGLKQIRETEMIGDEGVEDLTVDIKTTTSHKVPLFKLKAWLESSGRDPREAALKSKLR* |
Ga0137394_113170181 | 3300012922 | Vadose Zone Soil | HVSFVDARGVRHSVTVYASSVLEAAAAGLKLIRETEMIEDESVLDLTVDLMTSTSHKVPLSRLKAWLESSGRDPREAAMKTTLR* |
Ga0157370_101702641 | 3300013104 | Corn Rhizosphere | VSFVHQPGIRHSVAVYAGSVLEAAAAGLKQIRETEMIGEYGVEDLTVDIKTTTSHKVPFLKLKAWLESSGLSPREAALKSKLR* |
Ga0157369_117226801 | 3300013105 | Corn Rhizosphere | PTVSMAIRECQVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGEDGVEDLTVDIKTMTSHKVPFLKLKAWLQSSGRDPREAALKSKLR* |
Ga0157374_102367113 | 3300013296 | Miscanthus Rhizosphere | MAIRECQVSFVDQRGIRHSVGVYAGSVLEAAAAGLKQIRETEMVGDDGVEDLTVDIKATTSHKVPLFKLKAWLQSSGRDPREAALKTKLR* |
Ga0157374_123611151 | 3300013296 | Miscanthus Rhizosphere | MAIRECKVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIHETEMIGDEGVEDLTVDINTTTSHKVPLFKLKAWLESSGRD |
Ga0157374_129430491 | 3300013296 | Miscanthus Rhizosphere | PGSKGFRRTKDEYARLQVSMAIRECQVSFIDQRGVRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEDLTVDIKTTTSHKVPLFKLKAWLESSGRDPREAALKSKLR* |
Ga0157378_103391212 | 3300013297 | Miscanthus Rhizosphere | MAIRECQVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEDLTVDIKTTTSRKVPLFKLKAWLESSGRDPREAALKSKLR* |
Ga0163162_100742943 | 3300013306 | Switchgrass Rhizosphere | MAIRECQVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGDNGVEDLTVDIKTMTSHKVPFLKLKAWLESSGRSPREAALKSKLR* |
Ga0163162_102732773 | 3300013306 | Switchgrass Rhizosphere | MAIRECQVSFVDQRGIRHSVAVYAQPLPIPYSAAGLKQIRETEMIGDDGVEDLTVDIKSTTSHKVPLFKLKAWLESSGRDPREAALKSKLR* |
Ga0163162_109276312 | 3300013306 | Switchgrass Rhizosphere | MAIRECQVSFVDQRGIRYSVAVYASTVLEAAADGLKQIRESEMIGEDGVEDLTVEIRTTTSHKVPFLKLKAWLESSGRSPREAALKSKLR* |
Ga0157372_109101682 | 3300013307 | Corn Rhizosphere | MAIRECQVSFVDQRGIRHSIVVYASTILEAAAVGLKQIRETQMIGEDGIEDLTVDIKTMTSHKVPFLKLKAWLESSGRSSREAR* |
Ga0157372_117128841 | 3300013307 | Corn Rhizosphere | MAIRECQVSFVDQRGIRHSVAVYASTVLEAAAAELKQIRDTEMIGEEGVEDLTVDIKTVTSHKVPFLKLKAWLQSSGRDPREAALKSKLR* |
Ga0157372_117249081 | 3300013307 | Corn Rhizosphere | GIRHSVAVYAGSVLEAAAAGLKQIRETEMIGEYGVEDLTVDIKTTTSHKVPFLKLKAWLESSGLSPREAALKSKLR* |
Ga0157375_100185083 | 3300013308 | Miscanthus Rhizosphere | MAIRECQVSFVDQRGIRQSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEDLTVDIKSTTSHKVPLFKLKAWLESSGRDPREAALKSKLR* |
Ga0157375_114357692 | 3300013308 | Miscanthus Rhizosphere | MAIRECQVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGEEGVEDLTVDIKTMTSHKVPFLKLKAWLESSGRSPREAALKSKLR* |
Ga0157379_101464951 | 3300014968 | Switchgrass Rhizosphere | CQVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEDLTVDIKSTTSHKVPLFKLKAWLESSGRDPREAALKSKLR* |
Ga0167649_1005166 | 3300015063 | Glacier Forefield Soil | MAIRECQVSFVDQRGIRHSVAVYASTMLEAAAAGLKQIRETEMIGDDGVEDLIVDINTTTSHKVPLFKLKAWLESSGRDPREAALKSKLR* |
Ga0167650_10106664 | 3300015203 | Glacier Forefield Soil | MAIREGQVSFVDQRGIRHSVAVYASTVLEAADAGLKQIRETEMIGDDGVEDLIVDINTTTSHKVPLFKLKAWLESSGRDPREAALKSKLR* |
Ga0137412_102458312 | 3300015242 | Vadose Zone Soil | MSVATVSMPIRECQVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEDLTVDIQSTTSHKVPLFKLKAWLESSGRDPLHATGSP* |
Ga0132258_113685862 | 3300015371 | Arabidopsis Rhizosphere | MAIRECQVSFIDQRGVRHSVAVYAASVLEAAAAGLKQIHETEMIGDEGVEDPTVDIRTTTSHKVPLFKLKAWLESSGRDPREAALKSKLR* |
Ga0187824_102612261 | 3300017927 | Freshwater Sediment | MANKERTCYPTDSMAIRECHVSFVDVRGVRHSVTVYASSVLEAAAAGLKQIRETEMIEDEGVLDLTVELRTITSHKVPLSKLKSWIESGGRDPRDAAMKAKLR |
Ga0187817_101824122 | 3300017955 | Freshwater Sediment | MPVRECKVSFVDARGVRHVVTVYANSVLEAAAAGLRQIRETEMIEDEGVLDLTVDLVTVTSHKVSLGKLQAWLESSGRDPREAALKTKLR |
Ga0210384_103979372 | 3300021432 | Soil | VSFVDQRGIRHSVSVYASTVLEAAATGLKQIRGTEMIGDDGVEDLTVDIKTTTSHKVPFFKLKAWLESSGRDPREGALKSKLR |
Ga0210402_102678433 | 3300021478 | Soil | LQAYGHMRGLAKKERRCYSTVSMAIRECRVSFVDQRGIRHSVAVYASTVPEAAAAGLKQIRETEMIGDDGVEDLTVDIKTTTSHKVPFFKLKAWLESSGRDPREAALKSKLR |
Ga0209483_11100123 | 3300025862 | Arctic Peat Soil | MAIRECQVSFVDQRGIRHSVAVYAGSVLEAAAAGLKQIRETEMIGDEGVEDLTVDIKTTTSHKVPLFKLEAWLQSSGRDPREAALKSKLR |
Ga0207710_101762743 | 3300025900 | Switchgrass Rhizosphere | LALSISAGVRHSVAVYAGSVLEAAATGLKQIRETEMIGDDGVEDLPVDIKTTTSHKVPLFKLKAWLESSGRDPREAAVKAKLK |
Ga0207705_103617792 | 3300025909 | Corn Rhizosphere | MAIRECQVSFIDQRGVRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEDLTVDIKTTTSHKVPLFKLKAWLESSGRDPREAALKSKLR |
Ga0207654_100581141 | 3300025911 | Corn Rhizosphere | MAVRECQVSFVDQRGVRHSVAVYAGSVLEAAATGLKQIRETEMIGDDGVEDLTVDINTTTSHKVPLFKLKAWLESSGRDPSEAALKSKLR |
Ga0207654_101335333 | 3300025911 | Corn Rhizosphere | MPICECQVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEGLKVDIKTTTSHKVPFFKLKAWLEGNGRDPREAALKSKLR |
Ga0207654_108452431 | 3300025911 | Corn Rhizosphere | MALRECQVSFVDQRRIRHSVAVYASAVLAATAAGLKQIRETEMIGEDGVEDLTVDIKIMTSHKVPFLKLKAWLEGSDRSPREAALKTKLR |
Ga0207695_100667495 | 3300025913 | Corn Rhizosphere | MALRECQVSFVDQRRIRHSVAVYASAVLAATAAGLKQIRETEMIGEDGVEDLTVDIKIMTSHKVPFLKLKAWLEGSYRSPREAALKTKLR |
Ga0207694_112948182 | 3300025924 | Corn Rhizosphere | MAIRECQVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGGDGVEDLTVDIKTMTSHKVPFLKLKAWLQSSGRDPREAALKSKLR |
Ga0207694_115630482 | 3300025924 | Corn Rhizosphere | MAIRECQVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMVGDDGVEDLTVDIKTTTSHKVPLFKLKAWLQSSGRDPREAALKTKLR |
Ga0207687_102448672 | 3300025927 | Miscanthus Rhizosphere | MAIRECQVSFIDQRGIRHSVAVYASTVLEAAAVGLKQIRETEMIGDDGVEDLTVDIKTTTSHKVPLFKLKAWLESSGRDPREAALKSKLR |
Ga0207644_102799132 | 3300025931 | Switchgrass Rhizosphere | MAIRECQVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEDLTVDIKSTTSHKVPLFKLKAWLESSGRDPREAALKSKLR |
Ga0207644_102904782 | 3300025931 | Switchgrass Rhizosphere | MAIRDTELALSISAGVRHSVAVYAGSVLEAAATGLKQIRETEMIGDDGVEDLPVDIKTTTSHKVPLFKLKAWLESSGRDPREAAVKAKLK |
Ga0207686_100536151 | 3300025934 | Miscanthus Rhizosphere | DQRGIRHSVGVYAGSVLEAAAAGLKQIRETEMVGDDGVEDLTVDIKATTSHKVPLFKLKAWLQSSGRDPREAALKTKLR |
Ga0207686_102465591 | 3300025934 | Miscanthus Rhizosphere | MPDGSIIRHSVSVYASTVLEAAAAGLKQIRETEMIGDDGVDELIGDIKITTSHKVPHFKLKAWLESSGRDPREAALKSKLR |
Ga0207709_103490493 | 3300025935 | Miscanthus Rhizosphere | MAIRECQVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEDLTVDIKTTTSRKVPLFKLKAWLESSGRDPREAALKSKLR |
Ga0207709_112985371 | 3300025935 | Miscanthus Rhizosphere | MAIRECQVSFVDQRGIRHSVGVYAGSVLEAAAAGLKQIRETEMVGDDGVEDLTVDIKTTTSHKVPLFKLKAWLQSSGRDPREAALKSKLR |
Ga0207711_104828632 | 3300025941 | Switchgrass Rhizosphere | MTIRECKVSFIDRRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEDLTVDIKTTTSHKVALFSGRDPREAALKSKLR |
Ga0207711_108367622 | 3300025941 | Switchgrass Rhizosphere | VSFTDSRGIRHSTAVYAGSVLEAAALGLKHIQETDMVGDDGVLELTVDLTSTTTHRVPLSKLKAWLESSGRDPREAAMKAKLR |
Ga0207677_115154831 | 3300026023 | Miscanthus Rhizosphere | MAKKERRCYPTDSMAIRECQVSFVDQRGIRHSVTVYAGSVLEAAAAGLKQIRETEMIGDEGVEDLTVDIKSTTSHKVPLFKLKAWLESSGRDPREAALKAKLR |
Ga0207703_111412231 | 3300026035 | Switchgrass Rhizosphere | DQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGEEGVEDLTVDIKTMTSHKVPFLKLKAWLESSGRSPREAALKSKLR |
Ga0207698_111263611 | 3300026142 | Corn Rhizosphere | QVSMAIRECQVSFIDQRGVRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEDLTVDIKTTTSHKVPLFKLKAWLESSGRDPREAALKSKLR |
Ga0209068_100408502 | 3300027894 | Watersheds | MAIRECQVSFVDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGDDGVEDLTVDIKTTTSHKVPFFKLKAWLESSGRDPREAALKSKLR |
Ga0209488_109858631 | 3300027903 | Vadose Zone Soil | VSFVDQRGIRHSVSVYASTVLEAAATGLKQIRETEMIGDDGVEDLTVDIKTTTSHKVPFFKLKAWLESSGRDPREATLKSKLR |
Ga0209006_109256482 | 3300027908 | Forest Soil | MPIRECQVSFIDQRGVRHSVAVHACSVLEAAAAGLKQIRETEMIGDDGVEDLTVDIKSTTSYKVPLFKLKAWLESSGRDPREAALKSKLR |
Ga0268266_100950332 | 3300028379 | Switchgrass Rhizosphere | MRFRWRFKNGKVNFVDQRGIRHSVAVYTSTVLEAAAAGLKQIRETEMIGDEGVENLTVDINTTTSHTIPFLKLKAWLESSGRDPREAALKSKVR |
Ga0307503_107796261 | 3300028802 | Soil | MAIRECQVSFVDQRGIRHSAAVYASTVLEAAAAGLKQIRETEMIGDDGVENLTVDINTTTSHKVPLFKLKAWLESSGRDPREAALK |
Ga0311340_115877802 | 3300029943 | Palsa | MAVRECQVSFVDQRGIRHAVAVYAGSVLEAAAAGLKQIRETEMIGDDGIEDLTVDIKTTTTHKIPILKLKAWLESSGRDPREAALKSKLR |
Ga0311366_105873291 | 3300030943 | Fen | MPVRECKVSFVDAGGVRHSVAACASSVLETAAAGLKQIRETEMIENDGVLDLTVDLITSTSHKISLRLKVWLECGKRLRKRS |
Ga0170824_1078354581 | 3300031231 | Forest Soil | DISPPREDEASLWPNSAMANKERTCYPTGSMAIRECHVSFVDARGVRHSVTVYASSVLEAAAAGLKLIRETEMIEDESVLDLTVDLMTSTSHKVPLSRLKAWLESSGRDPREAAMKTKLR |
Ga0265313_103862211 | 3300031595 | Rhizosphere | MAIRECQVSFIDQRGIRHSVAVYASTVLEAAAAGLKQIRETEMIGEDGVEDLTVDIKTMTSHKVPFLRLKAWLESSARSPREAALKSKLR |
Ga0310686_1134383881 | 3300031708 | Soil | MAIRECQVSFIDQRGVRHSVAVYAASVLEAAAAGLKQIRETEMIGDEGVEDLTVDIKTTTSHKVPLFKLKAWLESSGRDPREAALKSKLG |
Ga0307475_111866142 | 3300031754 | Hardwood Forest Soil | MAVRECTVNFLDARGLRHSTTVYASSVLEAAALGLKQLRQIDMIEDDGAIELTVELVTRTIHQVPLSNLRAWLNSSGRDPREAAMKAKLK |
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