NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F099746

Metagenome / Metatranscriptome Family F099746

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F099746
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 118 residues
Representative Sequence MNPDYLWLTGAMQLLTFFVVGPVIAIAIAYAAWRGKPQNVNTERYGTVCAASGVTAFLLFGFAKWMNADVRTGQYFLQLACVLLSGLLFGVFMGCGFSVLLRLWRWHKTTRLADDNQTER
Number of Associated Samples 93
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 18.45 %
% of genes near scaffold ends (potentially truncated) 26.21 %
% of genes from short scaffolds (< 2000 bps) 77.67 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (50.485 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(11.650 % of family members)
Environment Ontology (ENVO) Unclassified
(24.272 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(46.602 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 69.59%    β-sheet: 0.00%    Coil/Unstructured: 30.41%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF00871Acetate_kinase 4.85
PF02371Transposase_20 1.94
PF14559TPR_19 1.94
PF10369ALS_ss_C 1.94
PF01548DEDD_Tnp_IS110 1.94
PF12867DinB_2 1.94
PF14568SUKH_6 0.97
PF00106adh_short 0.97
PF00120Gln-synt_C 0.97
PF00873ACR_tran 0.97
PF13519VWA_2 0.97
PF03091CutA1 0.97
PF02878PGM_PMM_I 0.97
PF00034Cytochrom_C 0.97
PF10609ParA 0.97
PF05598DUF772 0.97
PF13004BACON 0.97
PF13602ADH_zinc_N_2 0.97
PF00892EamA 0.97
PF13620CarboxypepD_reg 0.97
PF02636Methyltransf_28 0.97
PF03992ABM 0.97
PF03748FliL 0.97
PF00248Aldo_ket_red 0.97
PF13742tRNA_anti_2 0.97
PF13671AAA_33 0.97
PF01381HTH_3 0.97
PF00484Pro_CA 0.97
PF05231MASE1 0.97
PF12697Abhydrolase_6 0.97
PF01797Y1_Tnp 0.97
PF00543P-II 0.97
PF13710ACT_5 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG0282Acetate kinaseEnergy production and conversion [C] 4.85
COG3426Butyrate kinaseEnergy production and conversion [C] 4.85
COG3547TransposaseMobilome: prophages, transposons [X] 3.88
COG0288Carbonic anhydraseInorganic ion transport and metabolism [P] 0.97
COG0347Nitrogen regulatory protein PIISignal transduction mechanisms [T] 0.97
COG0642Signal transduction histidine kinaseSignal transduction mechanisms [T] 0.97
COG1109PhosphomannomutaseCarbohydrate transport and metabolism [G] 0.97
COG1324Divalent cation tolerance protein CutAInorganic ion transport and metabolism [P] 0.97
COG1565SAM-dependent methyltransferase, MidA familyGeneral function prediction only [R] 0.97
COG1580Flagellar basal body-associated protein FliLCell motility [N] 0.97
COG1943REP element-mobilizing transposase RayTMobilome: prophages, transposons [X] 0.97
COG3447Integral membrane sensor domain MASE1Signal transduction mechanisms [T] 0.97
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 0.97
COG0033Phosphoglucomutase/phosphomannomutaseCarbohydrate transport and metabolism [G] 0.97

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms50.49 %
UnclassifiedrootN/A49.51 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002245|JGIcombinedJ26739_101758341Not Available520Open in IMG/M
3300003321|soilH1_10027642All Organisms → cellular organisms → Bacteria1730Open in IMG/M
3300003505|JGIcombinedJ51221_10051766All Organisms → cellular organisms → Bacteria → Acidobacteria1562Open in IMG/M
3300005335|Ga0070666_10385122Not Available1007Open in IMG/M
3300005338|Ga0068868_100928632Not Available792Open in IMG/M
3300005355|Ga0070671_100170733Not Available1839Open in IMG/M
3300005435|Ga0070714_101946450All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Nitrococcus → Nitrococcus mobilis573Open in IMG/M
3300005451|Ga0066681_10303320Not Available977Open in IMG/M
3300005468|Ga0070707_100046034All Organisms → cellular organisms → Bacteria → Proteobacteria4174Open in IMG/M
3300005526|Ga0073909_10000336All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae16041Open in IMG/M
3300005536|Ga0070697_100239678All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1548Open in IMG/M
3300005614|Ga0068856_101781526Not Available628Open in IMG/M
3300005614|Ga0068856_102682621Not Available504Open in IMG/M
3300005841|Ga0068863_101119114Not Available792Open in IMG/M
3300005921|Ga0070766_10018196All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3706Open in IMG/M
3300005993|Ga0080027_10057593All Organisms → cellular organisms → Bacteria → Acidobacteria1414Open in IMG/M
3300005994|Ga0066789_10207846Not Available825Open in IMG/M
3300006173|Ga0070716_100521930All Organisms → cellular organisms → Bacteria880Open in IMG/M
3300006175|Ga0070712_100145058All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1816Open in IMG/M
3300006175|Ga0070712_100908285Not Available759Open in IMG/M
3300006175|Ga0070712_100972438All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium734Open in IMG/M
3300006237|Ga0097621_100392351All Organisms → cellular organisms → Bacteria1241Open in IMG/M
3300006854|Ga0075425_101581523Not Available739Open in IMG/M
3300006871|Ga0075434_101555197Not Available670Open in IMG/M
3300006903|Ga0075426_10437570Not Available967Open in IMG/M
3300006903|Ga0075426_11282415Not Available556Open in IMG/M
3300006914|Ga0075436_100402039All Organisms → cellular organisms → Bacteria992Open in IMG/M
3300006914|Ga0075436_101243808All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300009101|Ga0105247_11304517Not Available583Open in IMG/M
3300009162|Ga0075423_12352185Not Available580Open in IMG/M
3300009177|Ga0105248_10060835All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin60764240Open in IMG/M
3300010043|Ga0126380_10361149Not Available1062Open in IMG/M
3300010359|Ga0126376_12044385Not Available615Open in IMG/M
3300010361|Ga0126378_13096217Not Available529Open in IMG/M
3300010371|Ga0134125_11795289Not Available667Open in IMG/M
3300010373|Ga0134128_10042646All Organisms → cellular organisms → Bacteria5281Open in IMG/M
3300010376|Ga0126381_101092476Not Available1152Open in IMG/M
3300010376|Ga0126381_102016084Not Available832Open in IMG/M
3300010376|Ga0126381_102626612Not Available720Open in IMG/M
3300010379|Ga0136449_100824087Not Available1528Open in IMG/M
3300010396|Ga0134126_12848601Not Available524Open in IMG/M
3300010397|Ga0134124_10067432All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin60763044Open in IMG/M
3300011120|Ga0150983_16549769All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1079Open in IMG/M
3300012199|Ga0137383_10971152All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium620Open in IMG/M
3300012209|Ga0137379_10284700Not Available1564Open in IMG/M
3300012212|Ga0150985_120074196Not Available1006Open in IMG/M
3300012351|Ga0137386_11267501Not Available513Open in IMG/M
3300012359|Ga0137385_10718850All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium833Open in IMG/M
3300012469|Ga0150984_112574063Not Available538Open in IMG/M
3300012510|Ga0157316_1048645Not Available578Open in IMG/M
3300012922|Ga0137394_10490878Not Available1043Open in IMG/M
3300012948|Ga0126375_10305699Not Available1106Open in IMG/M
3300012989|Ga0164305_10153376All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1566Open in IMG/M
3300013100|Ga0157373_11415144Not Available529Open in IMG/M
3300013297|Ga0157378_10550760All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_41159Open in IMG/M
3300013307|Ga0157372_11842722All Organisms → cellular organisms → Bacteria → Acidobacteria696Open in IMG/M
3300014169|Ga0181531_10031100All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3080Open in IMG/M
3300015264|Ga0137403_10700950All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428873Open in IMG/M
3300015371|Ga0132258_10351137All Organisms → cellular organisms → Bacteria → Acidobacteria3647Open in IMG/M
3300015371|Ga0132258_11534077All Organisms → cellular organisms → Bacteria1682Open in IMG/M
3300015372|Ga0132256_100179731All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2149Open in IMG/M
3300015373|Ga0132257_100246046All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2134Open in IMG/M
3300017930|Ga0187825_10068580All Organisms → cellular organisms → Bacteria1210Open in IMG/M
3300017934|Ga0187803_10372592Not Available576Open in IMG/M
3300017975|Ga0187782_10053715All Organisms → cellular organisms → Bacteria2932Open in IMG/M
3300018006|Ga0187804_10105728All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1160Open in IMG/M
3300018007|Ga0187805_10043525All Organisms → cellular organisms → Bacteria → Acidobacteria2014Open in IMG/M
3300018037|Ga0187883_10437363Not Available671Open in IMG/M
3300019999|Ga0193718_1121651Not Available515Open in IMG/M
3300020581|Ga0210399_10005219All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus10099Open in IMG/M
3300020582|Ga0210395_10017841All Organisms → cellular organisms → Bacteria5217Open in IMG/M
3300021168|Ga0210406_10021734All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5965Open in IMG/M
3300021170|Ga0210400_10000320All Organisms → cellular organisms → Bacteria → Acidobacteria55965Open in IMG/M
3300021477|Ga0210398_10276059All Organisms → cellular organisms → Bacteria → Acidobacteria1370Open in IMG/M
3300021479|Ga0210410_10193080All Organisms → cellular organisms → Bacteria → Acidobacteria1823Open in IMG/M
3300022508|Ga0222728_1115752Not Available521Open in IMG/M
3300022525|Ga0242656_1042522All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300022557|Ga0212123_10190838All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola1530Open in IMG/M
3300024288|Ga0179589_10565159Not Available531Open in IMG/M
3300025903|Ga0207680_10018424All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3711Open in IMG/M
3300025906|Ga0207699_10100345All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1836Open in IMG/M
3300025915|Ga0207693_10709177All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium779Open in IMG/M
3300025916|Ga0207663_10164500Not Available1570Open in IMG/M
3300025922|Ga0207646_10189992Not Available1855Open in IMG/M
3300025922|Ga0207646_11269295Not Available644Open in IMG/M
3300025939|Ga0207665_11194890Not Available607Open in IMG/M
3300026088|Ga0207641_11020289Not Available824Open in IMG/M
3300026323|Ga0209472_1157862Not Available838Open in IMG/M
3300027821|Ga0209811_10000746All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis12281Open in IMG/M
3300027889|Ga0209380_10004444All Organisms → cellular organisms → Bacteria → Acidobacteria8601Open in IMG/M
3300027908|Ga0209006_11461767Not Available519Open in IMG/M
3300030916|Ga0075386_11549739Not Available507Open in IMG/M
3300031231|Ga0170824_113418988Not Available627Open in IMG/M
3300031231|Ga0170824_115062899Not Available714Open in IMG/M
3300031446|Ga0170820_17058403Not Available641Open in IMG/M
3300031474|Ga0170818_113587455All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli713Open in IMG/M
3300031708|Ga0310686_113452757All Organisms → cellular organisms → Bacteria2386Open in IMG/M
3300032180|Ga0307471_101733152Not Available778Open in IMG/M
3300032783|Ga0335079_10003127All Organisms → cellular organisms → Bacteria19107Open in IMG/M
3300032893|Ga0335069_11370040Not Available767Open in IMG/M
3300033412|Ga0310810_10136295All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2874Open in IMG/M
3300034130|Ga0370494_012711All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2196Open in IMG/M
3300034195|Ga0370501_0162071All Organisms → cellular organisms → Bacteria778Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere11.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil8.74%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.80%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.80%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.80%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment3.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.88%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.88%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil3.88%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.88%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.91%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.91%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.94%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.94%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.94%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.94%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.94%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.94%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.97%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.97%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.97%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.97%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.97%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.97%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.97%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.97%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.97%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.97%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.97%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.97%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.97%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.97%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300005993Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012510Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610Host-AssociatedOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017930Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5EnvironmentalOpen in IMG/M
3300017934Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3EnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300019999Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022508Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022525Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300030916Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300034130Peat soil microbial communities from wetlands in Alaska, United States - Collapse_03_16EnvironmentalOpen in IMG/M
3300034195Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ26739_10175834113300002245Forest SoilMNPDYLWLTGALQLLTLFVVGPVIAIAIAYAAWRQKPQNFNPQRYGMLCVASGVSASLLLVLAKWINADVRTPQYFLQLACVVLGGLLLGVGVGCFFPVLLHVWRWHKTTRLADHNQTER
soilH1_1002764223300003321Sugarcane Root And Bulk SoilMNPDYLWLTDALQVLTVFVIGPAIGIAIAYAAWRGKLQNFNLQRYGKWCVASGVSAPLLWVLAKWINADVRTPQYFLQLTCVLLGGLLFGVAMGSLFPVLLQMVRWHKKTRLNDQD*
JGIcombinedJ51221_1005176623300003505Forest SoilMNPHYLWLTGAMQXLTIFVVAPAIAMAIAYSAWREEPQKLNPERYGIVCVSSGVTASLLLGFAKWMNADVRTAQYFLQLACVLVSGLLFGVCMGNGFPIVLSLWRWHKATRLTDSDRRDT
Ga0070666_1038512233300005335Switchgrass RhizosphereMNPEYLWLVDALQLLTIFLIGPALAIAIAYAAWRGKPKNFSPEQYGMVCVACGIGAVLLFVFAKWMNADVRTAQYFLQLAAVLLGGLLFGVCMGCGFPVLLRIWRWHRTTRLTNGNTRR*
Ga0068868_10092863213300005338Miscanthus RhizosphereGQLNSITSQTSSLVVRSSSEPSLPMNPEYLWLVDALQLLTIFLIGPALAIAIAYAAWRGKPKNFSPEQYGMVCVACGIGAVLLFVFAKWMNADVRTAQYFLQLAAVLLGGLLFGVCMGCGFPVLLRIWRWHRTTRLTNGNTRR*
Ga0070671_10017073323300005355Switchgrass RhizosphereMNPDYLWLTEAIELLTLFVVGPVLGIAIMYAAWTGKENNLNSQRPEVVCIASGVAGFLLFAFVKWLNADVRTPQYFLQFACFLLSGILFGVFMGTGFSAFLRLWRGHKATRL*
Ga0070714_10194645013300005435Agricultural SoilMNPDYLWLTGAIELLAFFVAGPALAIAMAHAAWRGKATIFNPRRSGTVCIASGVIAVLLFVFVKWMNADVRTPQYFLQFACFVISGLLFGVNMGSGVSLLLRLWRWHKTTRLSDSGQTGR
Ga0066681_1030332023300005451SoilMNPDYLWLTVAIEKLAFFVAAPLLSISIAYAAWRGKPQNFNTERYAIACIASGLTALLLFACAKWINADVRTGEYFLQFACALLSFLLLGVSAGCMFPVVLRVWRWHKASRLRNGNLT*
Ga0070707_10004603463300005468Corn, Switchgrass And Miscanthus RhizosphereMNPDYLWLTGAMQLLTFFVVGPLLAVAIAYATWRGKPQNFNPRRYGTVCVTSGMTAFLLFGFAKWMNADVRTVQYFLQSTCVLLSGLLFGVCMGSFFSVLLHVWRWHKTTQAER*
Ga0073909_10000336143300005526Surface SoilMSMNLDFLWLTGALQLLVLFVVGPVIAIAIAYAAWRQKPQNFNPKRYGMSCVASGVIASLLLGVAKWINADVRTAQYFLQLACVLSGGLLLGVGVGALIPVLLHVWRWHKTTSLADPNQTE*
Ga0070697_10023967823300005536Corn, Switchgrass And Miscanthus RhizosphereMNPDYLWLTGAMQLLTFFFVGPLLAVAIAYAAWRGKPQNFNPRQYGTVCVTSGVTAFLLFGFAKWMNADVRTAQYFLQSTCVLLSGLLFGVCMGSFFPVLLHVWRWHKTTQTKR*
Ga0068856_10178152613300005614Corn RhizosphereMNPDYLWLTGALQLLTIFIAGPVIGIAMAYAAWRRRAQDLNPRRYGKLCVASGVSACLLWVLAKWLNADVRTPQYFLQLTFVLVGGLLFGIAVGSLFPVLLHFWQWHKGTRLADDQARR*
Ga0068856_10268262113300005614Corn RhizosphereFLKRTRCYILLPMNPDYLWLTGAIQLLTVFVGGPVIAAAMAYAAWRGKLQSFSPQRYGKLCVGSGVSAVLLWVLAKWINADVRTPQYFLQFTSVLLGGLLFGVAMGSFFPVLLYLLRWHKATRLTEDD*
Ga0068863_10111911423300005841Switchgrass RhizosphereMNPDYLWLTEAIELLTLFVVGPVLGIAIMYAAWTGKENNLNSQRPEVVCIASGVAGFLLFAFVKWPNADVRTPQYFLQFACFLLSGILFGVFMGTGFSAFLRLWRGHKATRL*
Ga0070766_1001819663300005921SoilMNPDYLWLTGAVQLLTLFLVGPVIGIAIAYAAWHRKPQNFNPQRYGMLCVASGVSASFLLVLAKWINADVRTPQYFLQLACVLLGGLLLGVGMGCF
Ga0080027_1005759313300005993Prmafrost SoilMNPDYLWLTGAMELLTFFVVGPVLAIAIAYAAWRGIPQNFSPRRYGTVCIASGVTAFLLFGLAKWMNADVRTPQYFLQFTCFLTSGLLFGVFMGSGSSVLLRLWRWHKATRLSDSRRTGR
Ga0066789_1020784623300005994SoilMNPDYLWVTGALQLLTLFVLGSVIAIAIAYAAWRRKPQDFNPQRYGMLCVASGVSASLLLVLAKWINADVRTPQYFLQLACVLLGGLLLGVGMGCFFPVLLHVWRWHKTTRLAGHNQKER
Ga0070716_10052193013300006173Corn, Switchgrass And Miscanthus RhizosphereMSMNLDFLWLTGALQLLVLFVVGPVIAIAIAYAAWRQKPQNFNPKRYGMSCVASGVIASLLLGVAKWINADVRTAQYFLQLACVLSGGLLLGVGVGALIPVLCMCGVGTR*
Ga0070712_10014505813300006175Corn, Switchgrass And Miscanthus RhizosphereTFSTPTPVNNKYADSCILVSMNPDYLWLLDGLQLLTIFVVGPVIASVIAYSAWRRQPQNLNAQWFGKLCVASGVGACLLWALAKWINADVRTPQFFLQLICVLLGGLLFGVAMGSLFPVLLHGWRWHKATRLAQHDQAER*
Ga0070712_10090828523300006175Corn, Switchgrass And Miscanthus RhizosphereYRLPMNPEYLWLTDAIEFLTFFVAGPVLAIAIAYAAWRGNPKLFNPELYSVVCIASGVTASVLFVFVKWINADVRTPQYFLQFACFLISGLLFGVFMGSGFSVLLRLWRWHKATRLSDSAQTGR*
Ga0070712_10097243813300006175Corn, Switchgrass And Miscanthus RhizosphereMNPHYLWLTGAMQMLTIFVVAPAIAMAIAYSAWREEPQKLNPERYGIVCVSSGVTASLLLGFAKWMNADVRTAQYFLQLACVLVSGLLFGVCMGYGFPI
Ga0097621_10039235123300006237Miscanthus RhizosphereMNPEYLWLVDALQLLTIFLIGPALAIAIAYAAWRGKPKNFSPEQYGMVCVACGIGAVLLFVFAKWMNADVRTAQYFLQLAAVLLGGLLFGVCMGCGFPVLLRIWRWHRTTRLTNGNT
Ga0075425_10158152323300006854Populus RhizosphereMNPDYLWLTEAVELLTFFVVRPVLAIAIAFAAWRGKPQNVNTERYGMVCVASGVIASLLFGFAKWMNADVRTAQYFLQFACVLLSGLLFGVFMGCGFSVLLRLWRWHKTTRLADDNHRTMIGEISIAPTIH*
Ga0075434_10155519713300006871Populus RhizosphereMNPDYLWLTEPVLAIAIMYAAWTGKENNLNSQRPEVVGIASGVAGFLLFAFVKWLNADVRTPQYFLQFACFLLSGILFEVFMGTGFSAFLRLWRWHKATRL*
Ga0075426_1043757013300006903Populus RhizosphereMELLSFFFIGPLLAISIAYLAWRGKPHSFGPKGYRTVCFASGVTALLLFGLAKWINADVRTPQYFVQLACVLLSGPLFGVCMGSGFSVLLKVWRWHKPTRLIGEQ*
Ga0075426_1128241523300006903Populus RhizosphereADAMQLLTFFVVGPVLAIAIAYAGWKGKPESFDTRRYATVCVGSGVAAVLLFAFGQWLNADVRTPQYFLQLACVLLSGLLFGVYMGCGFPVLLGIWRWHKGTRLANERER*
Ga0075436_10040203913300006914Populus RhizosphereMNPEYLWLTGMAELLTFFVAGPALAIAIGYVAWRVKAQNFDLRRYGMVCVASGVTASLLFALAKWMNADVRTPQYFFQFAAVLLSGLLFGVSVGCGFPLFLQLWHWHKATRLPDGQQTQRSLK*
Ga0075436_10124380813300006914Populus RhizosphereDAMQLLTLFVVGPVLAIAIAYSGWKGKPEAFNTRRYAVVCIASGVTAVLLFAFGKWLNADVRTPQYCLQLACVLLSGLLFGVSMGCVFPVLLGIWRWHKVTRLASEHRGQ*
Ga0105247_1130451713300009101Switchgrass RhizosphereMNPDYLWLTEAIELLTLFVVGPVLAIAIRYAAWTGKENNLNSQRPEVVCIASGVAGFLLFAFVKWPNADVRTPQYFLQFACFLLSGILFGVFMGTGFSAFLRLWRGHKATRL*
Ga0075423_1235218513300009162Populus RhizospherePVLAIAIMYAAWTGKENNLNSQRPEVVGIASGVAGFLLFAFVKWLNADVRTPQYFLQFACFLLSGILFGVFMGTGFSAFLRLWRGHKATRL*
Ga0105248_1006083543300009177Switchgrass RhizosphereLFILFLYPLPMNPDYLWLTEAIELLTLFVVGPVLGIAIMYAAWTGKENNLNSQRPEVVCIASGVAGFLLFAFVKWPNADVRTPQYFLQFACFLLSGILFGVFMGTGFSAFLRLWRGHKATRL*
Ga0126380_1036114913300010043Tropical Forest SoilMNPDYLWLTGAAELLTFFVVGPILGIAIAYAAWQKQPQNFNPGRYGRLCIVSGAIAVSLLVFAKWLNADVRTARYFLQLASVLLSGLLFGACMGCGFSALLRVLRWHKATRLKE*
Ga0126376_1204438513300010359Tropical Forest SoilMTPKYLWLADATQLLAVFVVGPIIACAIAYAAWRGKPEKFSARRYGIVCVASGVTASLLIVLGKWINADVRTPQFFLQVICITVGGLLFGVGMGSFFPVLLHLWRWHQTTRLADHNQTER
Ga0126378_1309621713300010361Tropical Forest SoilMNPDYLWLTGAMELLTFFVVGPVIGAAIAYASWRGKSHNSTAKRYVAACVASGLAATLLFAFAKWMNADVRTSQYFVQFASVLLSGLLFGVFMGCGFSAFVGVWRWHKTTRLAGESQAER
Ga0134125_1179528923300010371Terrestrial SoilMNPDYLWLTDALELLTIFFVAPALAFAIAYAAWRGRPQYFNPARYPMLCIASGVTAALLFGFAKWLNADVRPPHYFLQLACVLISFLALGVFMGCGFSVLVASWRWHNRTRL*
Ga0134128_1004264683300010373Terrestrial SoilMNPHYLWLADAMQLLTFFVVGPVLAIAIAYAGWKGKPESFDTRRYAIVCVASGVTAVLLFAFGKWLNADVRTPQYFLQLACVLLSGLLFGVYMGCGFPVLLGIWRWHKPTRLANDPRER*
Ga0126381_10109247613300010376Tropical Forest SoilKFTISSMTPKYLWLADATQLLAVYVVGPIIACAIAYAAWRGKPEKFSARRYGIVCVASGVTASLLIVLGKWINADVRTPQFFLQVICITVGGLLFGVGMGSFFPVLLHLWRWHQTTRLADHNQTER*
Ga0126381_10201608423300010376Tropical Forest SoilMSPVNPKYLWLTDAMLLLSFYVVMPGIAIVIAYAAWRGKPQSFNVQRYGLVCVVSGVTSFLLFLVAKWINADVRTPQYFLQLGSVLLSLLLFGVGMGSILPVLLHMWRWHKATRLAHHDQTQR*
Ga0126381_10262661213300010376Tropical Forest SoilMQLLTLFVVGPVIAIVIAYAAWRGKPQNFNPQRYGMVCVASGVTASLLFVFAKWINADVRTPQYFLQLASILLGGLLLGVGMGSVFPVLLHAWRWHKTTRLADRV*
Ga0136449_10082408723300010379Peatlands SoilMNPDYLWLTGALQLLTLFVLGPVIAIAIAYAAWRRKPQNFNPQRYGMLYVASGVSASLLLVLAKWINADVRTPQYFLQLACVLLGGLLLGVGMGCFFPVLLHVWRWHKTTRLADHNQTGR
Ga0134126_1284860113300010396Terrestrial SoilLVSLVERRFLYSLHMNPHYLWLADAMQLLTFFVVGPVLAIAIAYAGWKGKPESFDTRRYAMIVCVGSGVTAVLLFAFGKWLNADVRTPQYFLQLACVLLSGLLFGVYMGSGFLVLLGIWRWHKATRLANDHRER*
Ga0134124_1006743213300010397Terrestrial SoilMNPDYLWLTEAIELLTLFVVGPVLGIAIMYAAWTGKENNLNSQRPEVVCIASGVAGFLLFAFVKWPNADVRTPQYFLQFACFLLSGILFGVFMGTGFSAFLRLWRWHKATRL*
Ga0150983_1654976923300011120Forest SoilMNPHYLWLTGAMQLLTIFVVAPAIAMAIAYSAWREEPQKLNPERYGIVCVSSGVTASLLLGFAKWMNADVRTAQYFLQLACVLVSGLLFGVCMGNGFPIVLSLWRWHKATRLTDSDRRDT
Ga0137383_1097115223300012199Vadose Zone SoilMNPDYLWLTGAMQLLTFFVVGPLLAVAIAYAAWRGKPQNFNPRRYGTVCVTSGVTAFLLFGFAKWMNADVRTAQYFLQSTFVLLSGLLFGVCMGSFFPVLLHVWRWHKTTQAER*
Ga0137379_1028470023300012209Vadose Zone SoilMNPDYLWLTGAIQLLTFFVIGPAIAIAIAYAAWRGKPHNFNSKRYGTACVASGVTAFLLFAFAKWMNADVRTAQYFLQLTCALLSGLLFGVCMGCFFPAVLHVWRWHKTTRLADHNQTER
Ga0150985_12007419613300012212Avena Fatua RhizosphereMNPEYLWLAGVIQLLTFFVVGPVLAIAIGYAAWRGKPKDFNPKRYGIVCVTSGATAVLLIVFAKWMNADVRTAQYFLQLSCVLLSGLLFGVFMGCGFSVLLSLLDWHKAT
Ga0137386_1126750113300012351Vadose Zone SoilMNPEYLWLTGAMQLLTFFGIGPALAIAITYKAWRGKPENLNLGRYVTLCVTSGVAASLLIWVAKWMDADVRTAMYFLQLACVFLSGLLFGVCMGCGWSLLLRMWYWHKTTRLTSADEP*
Ga0137385_1071885013300012359Vadose Zone SoilFFVVGPLLAVAIAYAAWRGKPQNFNPRRYGTVCVTSGVTAFLLFGFAKWMNADVRTAQYFLQSTFVLLSGLLFGVCMGSFFPVLLHVWRWHKTTQAER*
Ga0150984_11257406313300012469Avena Fatua RhizosphereMNPEYLWLAGVMQLLTFFVVGPVLAIAIGYAAWRGKPKDFNPKRYGIVCVTSGATAVLLIVFAKWMNADVRTAQYFLQLSCVLLSGLLFGVFMGCGFSVLLSLLDWHKATRLTGN*
Ga0157316_104864513300012510Arabidopsis RhizosphereMSMNLDFLWLTGALQLLVLFVVGPVIAIAIAYAAWRQKPQNFNPKRYGMSCVASGVIASLLLGVAKWINADVRTPQYFLQLACVLSGGLLLGVGVGALIPVLLHVWRWHKTTSLADPNQTE*
Ga0137394_1049087823300012922Vadose Zone SoilMNPDYLWLTGAMQLLTFFVVGPVIAIAIAYAAWRGKPQNVNTERYGTVCAASGVTAFLLFGFAKWMNADVRTGQYFLQLACVLLSGLLFGVFMGCGFSVLLRLWRWHKTTRLADDNQTER
Ga0126375_1030569913300012948Tropical Forest SoilMNPDYLWLTGAAELQTFFVVGPILGIAIAYAAWQKQPQNFNTGRYGLLCIVSGAIAVSLLVFAKWLNADVRTARYFLQLASVLLSGLLFGACMGCGFSALLRVLRWHKATRLKE*
Ga0164305_1015337633300012989SoilMNLDFLWLTGALQLLVLFVVGPVIAIAIAYAAWRQKPQNFNPKRYGMSCVASGVIASLLLGVAKWINADVRTAQYFLQLACVLSGGLLLGVGVGALIPVLCMCGVGTRQQASPIPIRQNDGS*
Ga0157373_1141514413300013100Corn RhizosphereLLVAHGALQLLTIFIAGPVIGIAMAYAAWRRRAQDLNPRRYGKLCVASGVSACLLWVLAKWLNADVRTPQYFLQLTFVLVGGLLFGIAVGSLFPVLLHFWQWHKGTRLADDQARR*
Ga0157378_1055076013300013297Miscanthus RhizosphereMNPEYLWLVDALQLLTIFLIGPALAIAIAYAAWRGKPKNFSPEQYGMVCVACGIGAVLLFVFAKWMNADVRTAQYFLQLAAVLLGGLLFGVCMGRGFPVLLHIWRWHRTTRLT
Ga0157372_1184272213300013307Corn RhizosphereMNPDYLWLTGAIQLLTVFVGGPVIAAAMAYAAWRGKLQSFSPQRYGKLCVGSGVSAVLLWVLAKWINADVRTPQYFLQFTSVLLGGLLFGVAMGSFFPVLLYLLRWHKATRLTEDD*
Ga0181531_1003110023300014169BogMNPDYLWLTDALQLLTLFVVGPVIAIAIAYAAWRQKPQSSNLRRYGMLCVASGVSASLLLGLAKWINADVRTPKYFLQLACTLFGGLLLGVGIGCFFPVLLHFRHWHKTTRLADHDQTER
Ga0137403_1070095013300015264Vadose Zone SoilMMKNAQKICPLGRIPILHFSCLVVHLFLYPLPINPDYLWLTGAIEMLTFFVGPVFAIAIAYAAWRGKPNNFNPERYGIVCVASGVTASLLFGFVKWMNADVRTPQYFLQFACFLLSGLLFGVFMGTGFSVLLRLWHWHKATRL*
Ga0132258_1035113753300015371Arabidopsis RhizosphereMNPDYLWLTEAIELLTLFVVGPVLAIAIRYAAWTGKENNLNSQRPEVVCIASGVAGFLLFAFVKWPNADVRTPQYFLQFACFLLSGILFGVFMGTGFSAFLRLWRWHKATRL*
Ga0132258_1153407723300015371Arabidopsis RhizosphereDYLWLTGAIELLAFFVAGPSLAIAIAYAAWRGKPTIFNPKRSGTVCIASGVIAVLLFVFVKWMNADVRTPQYFLQFACFVISGLLFGVYMGSGASLLLRLWRWHKTTRLSDSGQTGR*
Ga0132256_10017973113300015372Arabidopsis RhizosphereTGAMKLLTFFGVSPVMAIAIAYAAWRGKPRNFKSQRYVTACVASGVTATLLFAFAKWMNADVRTSQYFLQFASFLLSGLLFGVCMGCAFSALLGVWRWHKTTRLVDDSRAER*
Ga0132257_10024604633300015373Arabidopsis RhizosphereMNPDYLWLAGAMELLTFFVVGPVIAVAIAYAAWRRQPHNSNSQRYLTACVVSGVSATLLFAFAKWMNADVRTSQYFLQFASFLLSGLLFGVCMGCAFSALLGVWRWHKTT
Ga0187825_1006858023300017930Freshwater SedimentMNPDYLWLTGAMQLLSLFVVGPVLAIVIAYAAWRGKPQNFTRERYRTIWVVSGATALLLLGFAKWMNADVRTPQYFLQLTCVLLAGLLFGVSGGCGFSVLLAMWRWHKATRLKNDNPTER
Ga0187803_1037259213300017934Freshwater SedimentMNPDYLWLTGALQLLTLFVVGPVIAIAIAYAAWRRKPQNFNPRRSGMLCVASGVSASLLLVLAKWINADVRTPQYFLQLACVLLGGLLLGVGMGCFFPVLLHVWRWHKTTRLADHNQTER
Ga0187782_1005371553300017975Tropical PeatlandMNPDYLWLTGAIELLTFFVVGPVLAIAIAYAAWRGMPNNFGPERYGIVCVASGVTASLLFGFVKWMNADVRTPQYFLQFASFLLSGLLFGVFMGTGFSVLLRLWHWHKATRLSGSGRKER
Ga0187804_1010572813300018006Freshwater SedimentMNPDYLWLTGALQLLTLFVVGPVIAIAIAYAGWRRKPQNFNPQRYGMLCVASGVSASLLLVLAKWINADVRTPQYFLQLACVLLGGLLLGVGMGSFFPVLLHVWRWHKTTRLTDNNQTER
Ga0187805_1004352533300018007Freshwater SedimentMNPDYLWLTGAIELLAFFVAGPALAIAIAYAAWRGKPTIFNPKRSGTVCIASGIIAVLLFVFVKWMNADVRTPQYFLQFACFVISGLSFGVYMGSGVSLLLRLWRWHKATRLSDSGQTGR
Ga0187883_1043736313300018037PeatlandMNQDYLRPTGAAQLLTFFVVGPVVAAVIAYATWRGKPRNFSPQRYGMVCVASGAIASLLLGFAKWINADVRAPQYFLQLACVLVSGLLFGVLMGSGFSMFLCLWGWHKATRLREITGQND
Ga0193718_112165113300019999SoilMNPEYLWLVDALQLLTIFLIGPALAIAIAYAARRGKPQNFSPDQNFSPEQYGMVCVASGISAVLLFVFAKWMNADVRTAQYFLQLAAVLLGGLLFGVCMGCGFPVLLHLWRWHRTTRLTDGNTRR
Ga0210399_1000521923300020581SoilMLTIFVVAPAIAMAIAYSAWREEPQKLNPERYGIVCVSSGVTASLLLGFAKWMNADVRTAQYFLQLACVLVSGLLFGVCMGYGFPIVLSLWRWHKATRLTDSDRRDT
Ga0210395_1001784153300020582SoilMNPHYLWLTGAMQLLTIFVVAPAIAMAIAYSAWREEPQKLNPERYGIVCVSSGVTASLLVWFAKWMNADVRTAQYFLQLACVLVSGLLFGVCMGNGFPIVLS
Ga0210406_1002173443300021168SoilMLTIFVVAPAIAMAIAYSAWREEPQKLNPERYGIVCVSSGVTASLLLGFAKWMNADVRTAQYFLQLACVLVSGLLFGVCMGNGFPIVLSLWRWHKATRLTDSDRRDT
Ga0210400_10000320383300021170SoilMNPHYLWLTGAMQLLTIFVVAPAIAMAIAYSAWREEPQKLNPERYGIVCVSSGVTASLLVGFAKWMNADVRTAQYFLQLACVLVSGLLFGVCMGNGFPIVLSLWRWHKATRLTDSDRRDT
Ga0210398_1027605913300021477SoilMNPDYLWLTDAIELLTFFVVGPVLAVAIAYAAWRAKPNNFNPERYGIVCIASGVTASLLFGLVKWMNADVRTPQYFLQFSYFLLSGLLFGVFMGTGFVVLLRLWRCHKATRL
Ga0210410_1019308033300021479SoilMELWPGFDNHLRICARLGCLLWFEYHFPMNPQYLWLTDAVQLLTFFVVGPVLGIAIAYAAWRGKPQNTNPKRYGLVCVASGVTASLLFALAKWINADVRTAHYFLQLACFLVSGLLFGVFMGSGCSVLLGLWRWHGSTRLTDDNQKGR
Ga0222728_111575213300022508SoilMNPHYLWLTGAMQMLTIFVVAPAIAMAIAYSAWREEPQKLNPERYGIVCVSSGVTASLLLGFAKWMNADVRTAQYFLQLACVLVSGLLFGVCMGYGFPIVLSLWRWHKATRLTDSDRRDT
Ga0242656_104252223300022525SoilAMQLLTIFVVAPAIAMAIAYSEWREEPQKLNPERYGIVCVSSGVTASLLVGFAKWMNADVRTAQYFLQLACVLVSGLLFGVCMGNGFPIVLSLWRWHKATRLTDSDRRDT
Ga0212123_1019083823300022557Iron-Sulfur Acid SpringMNPKYLWVIGALQLLTFFVVGPGIAIAIAYAAWRGKPQTFNAKRYGMVCIACGVTASLLIILAKWINADMRTPQYFVQLACVLLGLLLFFVGIGSFFPVLLHVWRWHKTTQLSDQNQTGR
Ga0179589_1056515913300024288Vadose Zone SoilMNPDYLLLTGTLQLLTMFVIGPAIAIAIASAAWRGKPQNFNPERYGAFCVASGVAALLLFGFAKWLNADFRTAQYFLQVACVLLAGLLFGVCMGCGFSVMLRMWRWHNTTRLPQSRNADDSETH
Ga0207680_1001842413300025903Switchgrass RhizosphereMNPEYLWLVDALQLLTIFLIGPALAIAIAYAAWRGKPKNFSPEQYGMVCVACGIGAVLLFVFAKWMNADVRTAQYFLQLAAVLLGGLLFGVCMGCGFPVLLRIWRWHRTTRLTNGNTRR
Ga0207699_1010034533300025906Corn, Switchgrass And Miscanthus RhizosphereMNPEYLWLTDAIEFLTFFVAGPVLAIAIAYAAWRGKPKIFSPERYGMVCIASGVTASVLFVFVKWINADVRTPQYFLQFACFLISGLLFGVFMGSGFSVLLRMWRWNKATRLSDTGRTKR
Ga0207693_1070917713300025915Corn, Switchgrass And Miscanthus RhizosphereMNPHYLWLTGALQLLTIFVVAPAIAMAIAYSAWREEPQKLNPERYGIVCVSSGVTASLLLGFAKWMNADVRTAQYFLQLACVLVSGLLFGVCMGYGFPIVLSLWRWHKA
Ga0207663_1016450033300025916Corn, Switchgrass And Miscanthus RhizosphereMNPDYLWLTGALQLLTIFVVGPAIAVAIAYAAWRRRPHNFNPQRYGKLCVASGVSACLLWVLAKWVNADVRTPQYFLQLTCVLLGGLLFGIAMGSFFPVLLHIWHWHKATQLADHDQAGR
Ga0207646_1018999223300025922Corn, Switchgrass And Miscanthus RhizosphereMNPGHLWLTGAIELLTFFVAGPALAIAIAYAAWRGKPKIFNPERYGTVCIASGVTASLLFVFVKWMNADVRTPQYFLQFACFLISGLLFGVFMGSGFSVLLRLWRWHKATRLSDSGRTGR
Ga0207646_1126929513300025922Corn, Switchgrass And Miscanthus RhizosphereMNPDYLWLTGAMQLLTFFVVGPLLAVAIAYATWRGKPQNFNPRRYGTVCVTSGMTAFLLFGFAKWMNADVRTVQYFLQSTCVLLSGLLFGVCMGSFFSVLLHVWRWHKTTQAER
Ga0207665_1119489023300025939Corn, Switchgrass And Miscanthus RhizosphereMNPDYLWLTGAIELLTFFVAGPVLAIAIVYAAWPGKPKVFNPERYGMVCIASGLSASLLFLFVKWMNADVRTPQYFLQFVCFLISGLLFGVYMGSGFSVLLRLWRWHKATRLSDSGQTGR
Ga0207641_1102028913300026088Switchgrass RhizosphereMNPDYLWLTEAIELLTLFVVGPVLGIAIMYAAWTGKENNLNSQRPEVVCIASGVAGFLLFAFVKWPNADVRTPQYFLQFACFLLSGILFGVFMGTGFSAFLRLWRGHKATRL
Ga0209472_115786223300026323SoilMNPDYLWLTVAIEKLAFFVAAPLLSISIAYAAWRGKPQNFNTERYAIACIASGLTALLLFACAKWINADVRTGEYFLQFACALLSFLLLGVSAGCMFPVVLRVWRWHKASRLRNGNLT
Ga0209811_1000074673300027821Surface SoilMSMNLDFLWLTGALQLLVLFVVGPVIAIAIAYAAWRQKPQNFNPKRYGMSCVASGVIASLLLGVAKWINADVRTPQYFLQLACVLSGGLLLGVGVGALIPVLLHVWRWHKTTSLADPNQT
Ga0209380_1000444463300027889SoilMNPDYLWLTGAVQLLTLFLVGPVIGIAIAYAAWHRKPQNFNPQRYGMLCVASGVSASFLLVLAKWINADVRTPQYFLQLACVLLGGLLLGVGMGCFFPVLLHVWRWHKATRLADHNQTER
Ga0209006_1146176723300027908Forest SoilNSYILLSMNPDYLWLTGALQLLTLFVVGPVIAIAIAYAAWRQKPQNFNPQRYGMLCVASGVSASLLLVLAKWINADVRTPQYFLQLACVVLGGLLLGVGVGCFFPVLLHVWRWHKTTRLADHNQTER
Ga0075386_1154973913300030916SoilLRHQVQLFIRLLYHPLPMNPDYLWLTGAIELLALFVGGPVLAIVITYAAWTGKTNKLNPRRPEIVCLASGVTAVLLFVFVKWLNADVRTPQYFFQFACFLLGAILFGVCMGTGFSAILSLWRWHKATRL
Ga0170824_11341898813300031231Forest SoilMNPDYLWLTGAIELLALFVGGPVLAIVITYAAWTGKTNKLNPRRPEIVCLASGVTAVLLFVFVKWLNADVRTPQYFFQFACFLLGAILFGVCMGTGFSAILSLWRWHKATRL
Ga0170824_11506289923300031231Forest SoilMNHDYLLLTGTLQLLTVFVIGPAIAIAIASAAWRGKLSNFNPERYGMLCVAAGVAALLLFGFAKWLNADYRTSLYLLQVACFLLGGLLFGVCMGCGLSVMLRMWQLHKTTRLNRQRSADESETRKN
Ga0170820_1705840313300031446Forest SoilMAKNRNFTNNAVFEVGGEIACLRHQVQLFIRLLYHPLPMNPDYLWLTGAIELLALFVGGPVLAIVITYAAWTGKTNKLNPRRPEIVCLASGVTAVLLFVFVKWLNADVRTPQYFFQFACFLLGAILFGVCMGTGFSAILSLWRWHKATRL
Ga0170818_11358745523300031474Forest SoilMNPDYLRLTSALQLLTLFFFGPVIAIAIAYAAWRRKPQNFESQRYGMLCVASGVTASLLLLLAKWINADVRTLRYFLQLACVLLGGLLLGVCIGSLFPVLLRVWRWHKTTRFADHNQTER
Ga0310686_11345275733300031708SoilMADSYILLPMNPDYLWLTGAMQLLTFFVAGPVVAVVIAYAAWREKPRNFSPQRYGMVCAASGVIASLLLGFAKWINADVRTPQDFLQLACVLVSGLLFGVFMGSGFSVFLCLWRWHKATRLKGDNQTER
Ga0307471_10173315223300032180Hardwood Forest SoilMNPDYLWLTGAMQLLTFFFVGPLLAVAIAYAAWRGKPQNFNPRRYGTVCVTSGMTAFLLFGFAKWMNADVRTVQYFLQSTCVLLSGLLFGVCMGSFFSVLLHVWRWHKTTQAER
Ga0335079_10003127123300032783SoilMNPKYLWLADVMQLLTFFVVAPATAVAIAYAAWRGKPKNFTFQRYAVICVASGVTALALLVLAKRMDADIRTLQYFLQLACVLLGFLLLGVGIGSFFPVLLHAWRWHMETRLTNHNRTEH
Ga0335069_1137004013300032893SoilMAAFRPAIIRSRSERSLPMNPDYLGLVDALQLLTIFLIGPALAIAIAYAAWRGKPQNFSPERYGMVCVASGISAVLLFVFAKWMNADVRTAQYFLQLAAVLLGGLLFGVCMGCGFPVLLHVWRWHRTTRLTDGNTRR
Ga0310810_1013629563300033412SoilMNPHYLWLADAMQLLTFFVVGPVLAIAIAYAGWKGKPESFDTRRYAIVCVASGVTAVLLFAFGKWLNADVRTPQYFLQLACVLLSGLLFGVYMGCGFPVLLGIWRWHKPTRLANDPRER
Ga0370494_012711_908_12583300034130Untreated Peat SoilMNPNYLWLTGAMQLLTFFVVGPVLAIAIAYAAWRGKPQDFNRERYWMVCVASGMAAFLLFGFAKWMNADVRTAQYFLQLACVLLSGLLFGVFMGCGFSVLLGLWRWHNTTRLKHDN
Ga0370501_0162071_73_4353300034195Untreated Peat SoilMNPAYLWLTGAIELLTFFVVGPVLAIAIAHAEWRGKPSSFNTERYGIVCVASGITASLLFGFVKWMNADVRTPQYFLQFACFLLSGLLFGVFMGTGFSVLLRLWHWHKATRLSDASRTER

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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