Metagenome Family F099799

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099799
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	60 residues
Representative Sequence	MPIPEDDCVVCGRWPPADRWARRQITEWLPVGDDEPVCDECMMTFWRRLIVWDEPPG
Number of Associated Samples	72
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	59.80 %
% of genes near scaffold ends (potentially truncated)	57.28 %
% of genes from short scaffolds (< 2000 bps)	90.29 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.252 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (47.573 % of family members)
Environment Ontology (ENVO)	Unclassified (74.757 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (47.573 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.76% β-sheet: 0.00% Coil/Unstructured: 68.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00239	Resolvase	5.83
PF00589	Phage_integrase	4.85
PF01594	AI-2E_transport	1.94
PF11684	DUF3280	1.94
PF12796	Ank_2	0.97
PF01381	HTH_3	0.97
PF00296	Bac_luciferase	0.97
PF07238	PilZ	0.97
PF07369	DUF1488	0.97
PF00565	SNase	0.97
PF04314	PCuAC	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	5.83
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	5.83
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	1.94
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.97
COG2847	Copper(I)-binding protein	Inorganic ion transport and metabolism [P]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.25 %
All Organisms	root	All Organisms	41.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.25 %
cellular organisms	root	All Organisms → cellular organisms	41.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.25 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	38.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.25 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	32.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.25 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	27.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.25 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	26.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.25 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	21.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.25 %
Bradyrhizobium zhanjiangense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium zhanjiangense	2.91 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.94 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	0.97 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.25 %
Bradyrhizobium zhanjiangense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium zhanjiangense	2.91 %
Bradyrhizobium sp. CCBAU 051011	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011	0.97 %
Bradyrhizobium sp. 200	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	0.97 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	0.97 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004152\|Ga0062386_100204674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1553	Open in IMG/M
3300005614\|Ga0068856_102089686	Not Available	576	Open in IMG/M
3300005764\|Ga0066903_104755504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	722	Open in IMG/M
3300005764\|Ga0066903_104808479	Not Available	718	Open in IMG/M
3300006172\|Ga0075018_10511074	Not Available	627	Open in IMG/M
3300006175\|Ga0070712_101000203	Not Available	724	Open in IMG/M
3300006175\|Ga0070712_101485247	Not Available	592	Open in IMG/M
3300006852\|Ga0075433_10963154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	744	Open in IMG/M
3300006854\|Ga0075425_100322258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1779	Open in IMG/M
3300006904\|Ga0075424_100458967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1360	Open in IMG/M
3300006914\|Ga0075436_101048912	Not Available	613	Open in IMG/M
3300010043\|Ga0126380_11985433	Not Available	532	Open in IMG/M
3300010360\|Ga0126372_11530922	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300010362\|Ga0126377_12641389	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300010366\|Ga0126379_12988321	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300010376\|Ga0126381_100177053	All Organisms → cellular organisms → Bacteria → Proteobacteria	2829	Open in IMG/M
3300010376\|Ga0126381_100571751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium zhanjiangense	1604	Open in IMG/M
3300012971\|Ga0126369_10272105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1679	Open in IMG/M
3300015371\|Ga0132258_12747614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1227	Open in IMG/M
3300015372\|Ga0132256_102017780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011	683	Open in IMG/M
3300016270\|Ga0182036_10026788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3371	Open in IMG/M
3300016270\|Ga0182036_10655034	Not Available	846	Open in IMG/M
3300016270\|Ga0182036_10672204	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300016319\|Ga0182033_10418904	Not Available	1136	Open in IMG/M
3300016319\|Ga0182033_11849258	Not Available	548	Open in IMG/M
3300016319\|Ga0182033_12077881	Not Available	518	Open in IMG/M
3300016341\|Ga0182035_10766502	Not Available	844	Open in IMG/M
3300016371\|Ga0182034_10205806	Not Available	1525	Open in IMG/M
3300016371\|Ga0182034_10269768	Not Available	1351	Open in IMG/M
3300016387\|Ga0182040_10527789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	947	Open in IMG/M
3300016387\|Ga0182040_11508692	Not Available	571	Open in IMG/M
3300016404\|Ga0182037_10927832	Not Available	756	Open in IMG/M
3300016404\|Ga0182037_11338710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	632	Open in IMG/M
3300017975\|Ga0187782_11414609	Not Available	547	Open in IMG/M
3300020579\|Ga0210407_10109081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2108	Open in IMG/M
3300021474\|Ga0210390_10606897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	917	Open in IMG/M
3300021560\|Ga0126371_12977063	Not Available	574	Open in IMG/M
3300031543\|Ga0318516_10061277	Not Available	2070	Open in IMG/M
3300031545\|Ga0318541_10470682	Not Available	703	Open in IMG/M
3300031546\|Ga0318538_10128902	Not Available	1326	Open in IMG/M
3300031546\|Ga0318538_10359695	Not Available	786	Open in IMG/M
3300031564\|Ga0318573_10232538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium zhanjiangense	981	Open in IMG/M
3300031573\|Ga0310915_10255206	Not Available	1234	Open in IMG/M
3300031573\|Ga0310915_11224275	Not Available	519	Open in IMG/M
3300031668\|Ga0318542_10151697	Not Available	1152	Open in IMG/M
3300031680\|Ga0318574_10710565	Not Available	589	Open in IMG/M
3300031681\|Ga0318572_10419710	Not Available	795	Open in IMG/M
3300031719\|Ga0306917_11291119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	565	Open in IMG/M
3300031719\|Ga0306917_11404529	Not Available	538	Open in IMG/M
3300031736\|Ga0318501_10134572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1261	Open in IMG/M
3300031736\|Ga0318501_10197638	Not Available	1051	Open in IMG/M
3300031744\|Ga0306918_10988296	Not Available	654	Open in IMG/M
3300031747\|Ga0318502_10707043	Not Available	609	Open in IMG/M
3300031747\|Ga0318502_10878767	Not Available	545	Open in IMG/M
3300031751\|Ga0318494_10871490	Not Available	528	Open in IMG/M
3300031764\|Ga0318535_10035843	Not Available	2014	Open in IMG/M
3300031769\|Ga0318526_10253435	Not Available	720	Open in IMG/M
3300031779\|Ga0318566_10352838	Not Available	726	Open in IMG/M
3300031781\|Ga0318547_10386346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	858	Open in IMG/M
3300031792\|Ga0318529_10469628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	585	Open in IMG/M
3300031793\|Ga0318548_10500215	All Organisms → cellular organisms → Bacteria → Proteobacteria	594	Open in IMG/M
3300031797\|Ga0318550_10126072	Not Available	1221	Open in IMG/M
3300031799\|Ga0318565_10555074	Not Available	553	Open in IMG/M
3300031821\|Ga0318567_10336438	Not Available	853	Open in IMG/M
3300031879\|Ga0306919_11060460	Not Available	619	Open in IMG/M
3300031879\|Ga0306919_11196168	Not Available	577	Open in IMG/M
3300031880\|Ga0318544_10181894	All Organisms → cellular organisms → Bacteria → Proteobacteria	810	Open in IMG/M
3300031912\|Ga0306921_10437574	All Organisms → cellular organisms → Bacteria → Proteobacteria	1524	Open in IMG/M
3300031912\|Ga0306921_10627585	Not Available	1240	Open in IMG/M
3300031912\|Ga0306921_12756371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	504	Open in IMG/M
3300031945\|Ga0310913_10578844	Not Available	796	Open in IMG/M
3300031947\|Ga0310909_10039050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3578	Open in IMG/M
3300032001\|Ga0306922_10089844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3235	Open in IMG/M
3300032001\|Ga0306922_10147621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2513	Open in IMG/M
3300032001\|Ga0306922_12317791	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300032009\|Ga0318563_10194981	Not Available	1092	Open in IMG/M
3300032009\|Ga0318563_10199195	Not Available	1080	Open in IMG/M
3300032009\|Ga0318563_10400954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	742	Open in IMG/M
3300032035\|Ga0310911_10065933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1924	Open in IMG/M
3300032035\|Ga0310911_10424207	Not Available	770	Open in IMG/M
3300032035\|Ga0310911_10872115	Not Available	519	Open in IMG/M
3300032039\|Ga0318559_10574126	Not Available	526	Open in IMG/M
3300032042\|Ga0318545_10109964	Not Available	969	Open in IMG/M
3300032042\|Ga0318545_10132387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	883	Open in IMG/M
3300032043\|Ga0318556_10243947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	938	Open in IMG/M
3300032044\|Ga0318558_10128995	Not Available	1205	Open in IMG/M
3300032052\|Ga0318506_10154293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1005	Open in IMG/M
3300032059\|Ga0318533_11182882	Not Available	560	Open in IMG/M
3300032068\|Ga0318553_10227932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium zhanjiangense	972	Open in IMG/M
3300032076\|Ga0306924_10692241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1145	Open in IMG/M
3300032076\|Ga0306924_11458589	All Organisms → cellular organisms → Bacteria → Proteobacteria	727	Open in IMG/M
3300032090\|Ga0318518_10407744	Not Available	697	Open in IMG/M
3300032090\|Ga0318518_10438369	Not Available	669	Open in IMG/M
3300032094\|Ga0318540_10305672	Not Available	767	Open in IMG/M
3300032261\|Ga0306920_100110478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4076	Open in IMG/M
3300032261\|Ga0306920_101057318	Not Available	1179	Open in IMG/M
3300032261\|Ga0306920_101752084	Not Available	878	Open in IMG/M
3300032261\|Ga0306920_102123684	Not Available	783	Open in IMG/M
3300032770\|Ga0335085_12376121	Not Available	529	Open in IMG/M
3300032828\|Ga0335080_10449234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	1376	Open in IMG/M
3300033289\|Ga0310914_10202059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1774	Open in IMG/M
3300033289\|Ga0310914_10909462	Not Available	779	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.20%
Host-Associated	Host-Associated	6.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.26%
Plants	Host-Associated → Plants	6.80%
Aquatic	Environmental → Aquatic	1.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.94%
Freshwater	Environmental → Aquatic → Freshwater	0.97%
Sediment	Environmental → Aquatic → Sediment	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.47%
Loam	Environmental → Terrestrial → Soil → Loam	3.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.91%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	76.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	47.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.77%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.94%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.97%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062386_1002046743	3300004152	Bog Forest Soil	LVNFTEHAAAMPIPEDDCVVCGSWRPTDRWARRQIIEWLPVGDDQPVCDECMMTSWQRLIVWDEPHGG*
Ga0068856_1020896862	3300005614	Corn Rhizosphere	LATFGEHAAAMPIPEDDCVLCKSWPLADRWARRQVTEWLPVGDDQPVCDECMMTSWQRLIVWDEPRG*
Ga0066903_1047555042	3300005764	Tropical Forest Soil	LGLLWATFGEHAAVMPTPEDECVVCKGWRPADRWARRRITEWLPVGDDQPVCEECIITSWQRQIVWDEIVA*
Ga0066903_1048084791	3300005764	Tropical Forest Soil	LATFGEHAAAMLILEDDCVVCKSWPQADRWARRQVTEWLPVGEDQPVCEECMMTSWQRLVWDEPRS*
Ga0075018_105110742	3300006172	Watersheds	MPIPEDDCVVCGRWPPAERWARRQVIEWLPVGDDQPVCDECMIALCWRQIVWDEPPGG*
Ga0070712_1010002032	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LGLLWATFGEHAVVMPIPEDECVVCQFWRPADRWARRRITEWLPVGDDQPVCEECIITSWQRQIVWDEIAA*
Ga0070712_1014852471	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	PEDDCVVCGRWPPAERWARRQITEWLPVGDDEPVCDECMMTFWRRLIVWDEPPGG*
Ga0075433_109631541	3300006852	Populus Rhizosphere	RPALGLRLATFGEHAAAMPIPEDDCVVCKSWPLADRWARRQVTEWLPVGDDQPVCDECMMTSWQRLIVWDEPRG*
Ga0075425_1003222581	3300006854	Populus Rhizosphere	LGLRLATFGEHAAAMPIPEDDCVVCKSWPLADRWARRQVTEWLPVGDDQPVCDECMMTSWQRLIVWDEPRG*
Ga0075424_1004589672	3300006904	Populus Rhizosphere	RPALGLRLATFGEHAAAMPIPEDDCVVCKSWPLADRWARRQVNEWLPVGDDQPVCDECMMTGWQRLIVWDEPRG*
Ga0075436_1010489122	3300006914	Populus Rhizosphere	MSIPEDDCVVCGRWPPAERWARRQITEWLPVGDDQPVCDECMMTSWQRLIVLDEPRG*
Ga0126380_119854331	3300010043	Tropical Forest Soil	AMPIPENDVAAMPIPEDDCVVCKGWPPTDRWARRQVTEWLPVGDDQPVCDECTMTFWQRLVMWDEPRG*
Ga0126372_115309222	3300010360	Tropical Forest Soil	MPIPEDDCVVCKSWPLADRWARRQVTEWLPVGDDQPVCDECMMTSWQRLVVWDEPRA*
Ga0126377_126413892	3300010362	Tropical Forest Soil	LATFGEHTAVMPIPEDDCVVCKSWPLADRWARRQVTEWLPVGDDQPVCDECMMTSWQRLIVWDEPRG*
Ga0126379_129883212	3300010366	Tropical Forest Soil	LGLLWASFGEHAAVMPIPEDECVVCKGWRPADRWARRRITEWLPVGDDQPVCEECMMTSWQRQIVWDE
Ga0126381_1001770533	3300010376	Tropical Forest Soil	MPIPEDDCVVCGRWPPADRWARRQITEWLPVGDDEPVCDECMMTFWRRLIVWDEPPGG*
Ga0126381_1005717512	3300010376	Tropical Forest Soil	LGLLWATFGEHAAVMPTPEDECVVCKGWRPADRWARRRITEWLPVGDDQPVCEECMMTSWQRQIVWDEKPPEKSPYKRVKGLP*
Ga0126369_102721052	3300012971	Tropical Forest Soil	LGLLWATFGEHAAVMPTPEDECVVCKGWRPADRWARRRITEWLPVGDDQPVCEECMMTSWQRQIVWDEIAA*
Ga0132258_127476141	3300015371	Arabidopsis Rhizosphere	HVDTRGRVVCGRWPPAERWARRQITEWLPVGDDEPVCDECMMTFWRRLIVGDEPPDG*
Ga0132256_1020177801	3300015372	Arabidopsis Rhizosphere	MSIPEDDCVVCGRWPSAERWARRQIAEWLPVGDDEPVRDECMMTFWRRLIVGDEPPDG*
Ga0182036_100267881	3300016270	Soil	AAVMPIPEDDCVVCGRWPPAERWARRQITEWLPVGDDEPVCDECMLTFWRRLIVWDEPPG
Ga0182036_106550342	3300016270	Soil	LGPLWATFGEHAAAMPIPENDCVVCKGWRPADRWARRRITEWLPVGDDQPVCEECMMISWQRL
Ga0182036_106722041	3300016270	Soil	TDRRTAMPIPEDDCVVCGRWPPADRWARRQITEWLPVGDDEPMCDECMMTFWRRLIVWNEPPGG
Ga0182033_104189042	3300016319	Soil	MPIPEEDCVVCGRWPPADRWARRQITEWLPVGDDEPVCDECMMTFWRRLIVWDEP
Ga0182033_118492581	3300016319	Soil	MPIPENDCVVCRGWRPADRWARRRITEWLPVGDDQPVCEECMMISWQRLIVS
Ga0182033_120778811	3300016319	Soil	LATFDEHAPAMPIPEDDCVVCRTWPAADRWARRAITEWQPVGDDQPVCDECMMT
Ga0182035_107665022	3300016341	Soil	MPIPEEDCVVCGRWPPADRWARRQITEWLPVGDDEPVCDECMMTFWRRLIVWDEPPGG
Ga0182034_102058061	3300016371	Soil	MPIPEDDCVVCGRWPPAERWARRQITEWLPVGDDQPVCDECMLTFWRRLIVWDEPPGG
Ga0182034_102697682	3300016371	Soil	LWATFGEHAAVMPIPENDCVVCKGWRPADRWARRRITEWLPVGNDQPVCEECMMISWQRLIVSDARA
Ga0182040_105277891	3300016387	Soil	MPIPEDECVVCKGWRPADRWARRRITEWLPVGDDQPVCEECIITSWQRQIVWDEIA
Ga0182040_115086922	3300016387	Soil	IPEDECVVCKGWRPADRWARRRITEWLPVGDDQPVCEECIITSWQRQIVWDEIAA
Ga0182037_109278321	3300016404	Soil	PIPEDDCVVCGRWPPADRWARRQITEWLPVGDDEPVCDECMLTFWRRLIVWDEPPGG
Ga0182037_113387102	3300016404	Soil	LWATFGEHAAVMPTPEDECVVCKGWRPADRWARRRITQWLPVGDDQPARDECMMTSWQRQIVWDEIAA
Ga0187782_114146092	3300017975	Tropical Peatland	EHAAAMPIPENDCAVCKGWRPADRWARRRITEWLPVGDDQPVCEECMMISWQRLIVSDAR
Ga0210407_101090812	3300020579	Soil	MPITEDNCVVCGGWPPAERWARRQVTEWLPVEDDEPVCDECMMTFWRRLVVWDEPPGG
Ga0210390_106068972	3300021474	Soil	MPITEDNCVVCGGWPPAERWARRQVTEWLPVEDDEPVCDECMMTFWGG
Ga0126371_129770631	3300021560	Tropical Forest Soil	LGPLWATFGEHAAAMPIPENDCVVCKGWRPADRWARRQITEWLPVGDDQPVCEECMMTSWQRQIV
Ga0318516_100612773	3300031543	Soil	MPIPEDDCVVCGRWPPADRWARRQITEWLPVGDDEPVCDECMMTFWRRLIVWDEPPGG
Ga0318541_104706822	3300031545	Soil	LWATFGEHAAVMPIPENDCVVCKGWRPADRWARRRITEWLPVGNDQPVCEECMMISWQRLIVSDEIAA
Ga0318538_101289023	3300031546	Soil	MSIPEDDCVVCGRWPPAERWARRQLTEWLPVRDDEPVCDECMIAFCWRQIVWDEPPGG
Ga0318538_103596952	3300031546	Soil	MPIPEDDCVVCGRWPPADRWARRQITEWLPVGDDEPVCDECMMTFWRRLIVWDEPPG
Ga0318573_102325381	3300031564	Soil	LGLLWATFGEHAAVMPTPEDECVVCKGWRPADRWARRRITEWLPVGDDQPVCEECLMTSWQRQIVWDE
Ga0310915_102552061	3300031573	Soil	LGLLWATFGEHAAAMPIPENDCVVCRGWRPADRWARRRITEWLPVGDDQPVCEECMMISWQRLIVSDARA
Ga0310915_112242752	3300031573	Soil	MPIPEDDCVVCRSWHPADRWARRQITEWQPVGDDQPVCDECMMTSWQR
Ga0318542_101516973	3300031668	Soil	MPIPENDCVVCRGWRPADRWARRRITEWLPVGDDQPVCEECMMISWQRLIVSDARA
Ga0318574_107105652	3300031680	Soil	MPIPEDDCVVCGRWPPADRWARRQTIEWLPVRDDEPVCDECMIAFCWRQIVWDEPPGG
Ga0318572_104197101	3300031681	Soil	LGLLWATFGEHAAVMPTPEDECVVCKGWRPADRWARRRITQWLPVGDDQPVCDECMMTSWQRQIVWDEIAA
Ga0306917_112911191	3300031719	Soil	LATFGEQAAAMPIPEDDCVVCKSWPPADRWARRRVTEWQPVGDDQPVCDECMMTSWQRLIVLDEPRS
Ga0306917_114045291	3300031719	Soil	CGRWPPADRWARRQITEWLPVGDDEPMCDECMMTFWRRLIVWNEPPGG
Ga0318501_101345723	3300031736	Soil	MPIPEDDCVVCGRWPPAERWARRQITEWLPVGDDEPVCDECMLTFWRRLIVWDEPPGG
Ga0318501_101976381	3300031736	Soil	PTPEDECVVCKGWRPADRWARRRITEWLPVGDDQPVCEECMMTSWQRQIVWDEMAA
Ga0306918_109882962	3300031744	Soil	MPIPEDDCVVCRSWHPADRWARRQITEWQPVGDDQPMCDECMMTSWQRLIVW
Ga0318502_107070431	3300031747	Soil	NDFVVCKGWRPADRWARRRITEWLPVGDDQPVCEECIITSWQRQIVWDEIAA
Ga0318502_108787671	3300031747	Soil	MPIPEDDCVVCKGWRPADRWARRRITEWLPVGDDQPVCEECMMISWQRLIVSDARA
Ga0318494_108714901	3300031751	Soil	MSIPEDDCVVCGRWPPAERWARRQTTEWLPVGDDEPMCDECMMAFWRRVIVWD
Ga0318535_100358432	3300031764	Soil	MSIPEDDCVVCGRWPPAERWARRQLTEWLPVRDDEPVCDECMMAFWRRVIVWDEPPGG
Ga0318526_102534351	3300031769	Soil	PIPEDDCVVCGRWPPAERWARRQTTEWLPVGDDEPVCDECMMAFWRRVIVWDEPPGG
Ga0318566_103528383	3300031779	Soil	MPIPEDDCVVCRSWHPADRWARRQITEWQPVGDDQPVCDECMMTSWQRLLVWD
Ga0318547_103863463	3300031781	Soil	LWATFGEHAAAMPIPENDCVVCKGWRPADRWARRRITEWLPVGDDQPVCEECMM
Ga0318529_104696283	3300031792	Soil	IPEDDCVVCKSWPPADRWARRRVTEWQPVGDDQPVCDECMMTSWLRLIVLDEPRS
Ga0318548_105002152	3300031793	Soil	MPIPEDDCVVCGRWPPAERWARRQTTEWLPVGDDEPVCDECMMAFWRRVIVWDEPPGG
Ga0318550_101260722	3300031797	Soil	LGLLWATFDEHAAVMPIPEDECVVCKGWRPADRWARRRITEWLPVGDDQPVCEECIITSWQRQIVWDEIAA
Ga0318565_105550741	3300031799	Soil	PIPEDDCVVCGRWPPADRWARRQITEWLPVGDDEPMCDECMMTFWRRLIVWNEPPGG
Ga0318567_103364382	3300031821	Soil	LWATFGEHSAAMPILENDCVVCKGWRPADRWARRRITEWLPVGDDQPVCEECMMTSWQRQIVWDEIAA
Ga0306919_110604601	3300031879	Soil	MLIPEDDCVVCKSWPPADRWSRRRVTEWQPVGDDQPVCDECMMTSWLRLIVLDEPRS
Ga0306919_111961681	3300031879	Soil	PEDECVVCKGWRPADRWARRRITEWLPVGDDQPVCEECIITSWQRQIVWDEIAA
Ga0318544_101818941	3300031880	Soil	IPENDCVVCKGWRPADRWARRRITEWLPVGDDQPMCDECMMTSWQRAIVWDEPRA
Ga0306921_104375741	3300031912	Soil	GEHAAAMPIPEDDCVVCRTWPAAHRWARRMITEWQPVGDDQPMCDECMMTSWQRAIVWDEPRV
Ga0306921_106275851	3300031912	Soil	MPIPEDDCVVCRSWHPADRWARRQITEWQPVGDDQPVCDECMMTSWQRLLVWDD
Ga0306921_127563713	3300031912	Soil	HRLATFGEQAAAMLIPEDDCVVCKSWPPADRWSRRRVTEWQPVGDDQPVCEECMMTSWLRLIVLDEPRS
Ga0310916_100235051	3300031942	Soil	MPIPENDCVVCRGWRPADRWARRRITEWLPVGDDQPVCEECMM
Ga0310913_105788441	3300031945	Soil	IDRPCLGLLWATFGEHAAVMPTPEDECVVCKGWRPADRWARRRITEWLPVGDDQPVCEECMMTSWQRQIVWDEMAA
Ga0310909_100390501	3300031947	Soil	RRELWGSPTPIPEDDCVVCGRWPPAERWARRQTTEWLPVGDDEPVCDECMMAFWRRVIVWDEPPGG
Ga0306922_100898441	3300032001	Soil	MPTPEDECVVCKGWRPADRWARRRITEWLPVGDDQPVCEECMMTSWQRQIVWDEMAA
Ga0306922_101476212	3300032001	Soil	MPIPEDDCVVCGRWPPAERWARRQITEWLPVGDDEPVCDECMLTFWRRLVVWDEPPGG
Ga0306922_123177911	3300032001	Soil	MPIPEDDCVVCGRWPPAERWARRQTTEWLPVGDDEPVCDECMMAFWRRVIVWD
Ga0318563_101949814	3300032009	Soil	MPIPEDDCVVCRSWHPADRWARRQITEWQPVSDDQPVCDECMMTTWQRLIVGDDPR
Ga0318563_101991951	3300032009	Soil	LWATFGQHAAAMPIPENDFVVCKGWRPADRWARRRITEWLPVGDDQPVCEECIITSWQRQIVWDEIAA
Ga0318563_104009541	3300032009	Soil	AAAMPIPEDDCVVCKGWLPADRWARRRVTEWQPVGDDQPVCDECMMTSWLRLIVLDEPRS
Ga0310911_100659331	3300032035	Soil	DCVVCGSWRPADRWARRQIREWLPVGDGQPVCDECMMTSWQRQIVWDEPRGG
Ga0310911_104242072	3300032035	Soil	LGLLWATFDEHAAVMPIPEDECVVCKGWRPADRWARRRITEWLPVGDDQPVCEECMMTSWQRQIVWDEIAA
Ga0310911_108721151	3300032035	Soil	AMPIPEDDCVVCGRWPPADRWARRQITEWLPVGDDEPMCDECMMTFWRRLIVWNEPPGG
Ga0318559_105741262	3300032039	Soil	CVVCRGWRPADRWARRRITEWLPVGDDQPVCEECMMISWQRLIVSDARA
Ga0318545_101099644	3300032042	Soil	MPIPEDDCVVCRSWHPADRWARRQITEWQPVSDDQPVCDECMMTSWQRLVVWDEPR
Ga0318545_101323872	3300032042	Soil	LWATFGEHAAAMPIPENDCVVCKGWRPADRWARRRITEWLPVGDDQPVCEECMMTSWQRQIVWDEIAA
Ga0318556_102439471	3300032043	Soil	LWATFGEHAAAMPIPENDCAVCKGWRPADRWARRRITEWLPVGDDQPVCEECMMISWQRLIVSDARA
Ga0318558_101289951	3300032044	Soil	LGPLWATFGEHAAAMPIPENDCVVCKGWRPADRWARRRITEWLPVGDDQPVCEECMMISWQRLIVSD
Ga0318506_101542932	3300032052	Soil	VCGRWPPAERWARRQTTEWLPVGDDEPVCDECMMAFWRRVIVWDEPPGG
Ga0318533_111828821	3300032059	Soil	LATFGEQAAAMLIPEDDCVVCKSWPPADRWSRRRVTEWQPVGDDQPVCDECMMTSWLRLIVLDEPRG
Ga0318553_102279322	3300032068	Soil	LGLLWATFGEHAAVMPTPEDECVVCKGWRPADRWARRRITEWLPVGDDQPVCEECMMTSWQRQIVWDEMAA
Ga0306924_106922411	3300032076	Soil	PIPEDECVVCKGWRPADRWARRRITEWLPVGDDQPVCEECIITSWQRQIVWDEIAA
Ga0306924_114585891	3300032076	Soil	MPIPEDDCVVCGRWPPAERWARRQTTEWLPVGDDEPVCDECMMAFWRRVIVWDEPPG
Ga0318518_104077444	3300032090	Soil	VCGRWPPAERWARRQLTEWLPVRDDEPVCDECMIAFCWRQIVWDEPPGG
Ga0318518_104383691	3300032090	Soil	MPIPEDDCVVCGRWPPADRWARRQITEWLPVGDDEPVCDECMMTFWRRLIVWD
Ga0318540_103056721	3300032094	Soil	LWATFGEHAAVMPTPEDECVVCKGWRPADRWARRRITEWLPVGDDQPVCEECIITSWQRQIVWDEIAA
Ga0306920_1001104781	3300032261	Soil	MPIPENDCVVCRGWRPADRWARRRITEWLPVGDDQPVCEECMMISWQRLI
Ga0306920_1010573181	3300032261	Soil	LATFGEQAAAMLIPEDDCVVCKSWPPADRWARRRVTEWQPVGDDQPVCDECMMTSWLRL
Ga0306920_1017520842	3300032261	Soil	MPIPEDDCVVCGRWPPAERWARRQVIEWLPVGDDQPVCDECMIAFCWRQIVWDEPPGG
Ga0306920_1021236841	3300032261	Soil	MPIPEDDCVVCGRWPPAKRWARRQITEWLPVGDDQPVCDECMLTFWRRLIVWDEIAA
Ga0335085_123761211	3300032770	Soil	GLGLATFGEHATTMAIPEDDCVVCKSWPSADRWARRQVTEWLPVSDDQPVCDECVLTTWQRLTVLDEPRV
Ga0335080_104492341	3300032828	Soil	LATFGEHATAMAITEDDCVVCKSWPSADRWARRQVTEWLPVSDDQPVCDECVMTTWQRL
Ga0310914_102020592	3300033289	Soil	LWATFGEHAAAMPIPENDCVVCKGWRPADRWARRRITEWLPVGDDQPVCEECMMISWQRLIVSDARA
Ga0310914_109094621	3300033289	Soil	MPIPEDDCVVCRSWHPADRWARRQITEWQPVGDDQPVCDECMMTSWQRLLVWDDPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F099799

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences