NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F099820

Metagenome / Metatranscriptome Family F099820

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F099820
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 49 residues
Representative Sequence LEERRQRVLDGLRDLAAQLQDALVEPTSRDMDDSLADALDVERRR
Number of Associated Samples 85
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 4.85 %
% of genes near scaffold ends (potentially truncated) 93.20 %
% of genes from short scaffolds (< 2000 bps) 91.26 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (86.408 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(28.155 % of family members)
Environment Ontology (ENVO) Unclassified
(29.126 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(59.223 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 54.79%    β-sheet: 0.00%    Coil/Unstructured: 45.21%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF01613Flavin_Reduct 43.69
PF13419HAD_2 11.65
PF01850PIN 2.91
PF02518HATPase_c 2.91
PF00155Aminotran_1_2 1.94
PF00903Glyoxalase 1.94
PF02801Ketoacyl-synt_C 1.94
PF12910PHD_like 1.94
PF13391HNH_2 1.94
PF01478Peptidase_A24 0.97
PF01019G_glu_transpept 0.97
PF12796Ank_2 0.97
PF04231Endonuclease_1 0.97
PF00211Guanylate_cyc 0.97
PF01135PCMT 0.97
PF05121GvpK 0.97
PF12681Glyoxalase_2 0.97
PF05973Gp49 0.97
PF11907DUF3427 0.97
PF07366SnoaL 0.97
PF09587PGA_cap 0.97
PF13328HD_4 0.97
PF00300His_Phos_1 0.97
PF08378NERD 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG1853FMN reductase RutF, DIM6/NTAB familyEnergy production and conversion [C] 43.69
COG0405Gamma-glutamyltranspeptidaseAmino acid transport and metabolism [E] 0.97
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 0.97
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 0.97
COG2356Endonuclease IReplication, recombination and repair [L] 0.97
COG2518Protein-L-isoaspartate O-methyltransferasePosttranslational modification, protein turnover, chaperones [O] 0.97
COG2519tRNA A58 N-methylase Trm61Translation, ribosomal structure and biogenesis [J] 0.97
COG3657Putative component of the toxin-antitoxin plasmid stabilization moduleDefense mechanisms [V] 0.97
COG4122tRNA 5-hydroxyU34 O-methylase TrmR/YrrMTranslation, ribosomal structure and biogenesis [J] 0.97
COG4679Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin systemDefense mechanisms [V] 0.97

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms86.41 %
UnclassifiedrootN/A13.59 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000559|F14TC_100954077Not Available1235Open in IMG/M
3300000858|JGI10213J12805_11834570Not Available593Open in IMG/M
3300000956|JGI10216J12902_103462112All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1648Open in IMG/M
3300000956|JGI10216J12902_105883760All Organisms → cellular organisms → Bacteria → Terrabacteria group928Open in IMG/M
3300001431|F14TB_100338459Not Available640Open in IMG/M
3300004114|Ga0062593_101183908All Organisms → cellular organisms → Bacteria800Open in IMG/M
3300004156|Ga0062589_101451902All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium672Open in IMG/M
3300004480|Ga0062592_102123931All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium558Open in IMG/M
3300005093|Ga0062594_102430698Not Available573Open in IMG/M
3300005344|Ga0070661_100585307All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300005353|Ga0070669_100351801All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1196Open in IMG/M
3300005450|Ga0066682_10347049All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria956Open in IMG/M
3300005471|Ga0070698_100526175All Organisms → cellular organisms → Bacteria1121Open in IMG/M
3300005545|Ga0070695_100761557All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300005553|Ga0066695_10001743All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria8857Open in IMG/M
3300005577|Ga0068857_100152848All Organisms → cellular organisms → Bacteria2092Open in IMG/M
3300005578|Ga0068854_101436317All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria625Open in IMG/M
3300005981|Ga0081538_10114059All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1318Open in IMG/M
3300006058|Ga0075432_10352587All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium624Open in IMG/M
3300006169|Ga0082029_1773441All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1077Open in IMG/M
3300006573|Ga0074055_11172915Not Available944Open in IMG/M
3300006796|Ga0066665_10441848All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1074Open in IMG/M
3300006918|Ga0079216_11141893All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300009012|Ga0066710_100755412All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1487Open in IMG/M
3300009012|Ga0066710_103782346All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium568Open in IMG/M
3300009137|Ga0066709_100348707All Organisms → cellular organisms → Bacteria2033Open in IMG/M
3300009137|Ga0066709_100461066All Organisms → cellular organisms → Bacteria1780Open in IMG/M
3300009156|Ga0111538_11355805All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium897Open in IMG/M
3300009174|Ga0105241_10710665All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria918Open in IMG/M
3300009819|Ga0105087_1100675All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium539Open in IMG/M
3300009823|Ga0105078_1027911All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium680Open in IMG/M
3300009837|Ga0105058_1162863All Organisms → cellular organisms → Bacteria → Terrabacteria group546Open in IMG/M
3300009840|Ga0126313_10000297All Organisms → cellular organisms → Bacteria23045Open in IMG/M
3300009840|Ga0126313_10154695All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1735Open in IMG/M
3300009840|Ga0126313_11024008Not Available677Open in IMG/M
3300010036|Ga0126305_10061520All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2161Open in IMG/M
3300010036|Ga0126305_10667757All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium701Open in IMG/M
3300010037|Ga0126304_10245243All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1178Open in IMG/M
3300010037|Ga0126304_10309052All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1048Open in IMG/M
3300010040|Ga0126308_10445604Not Available869Open in IMG/M
3300010044|Ga0126310_10379373All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1000Open in IMG/M
3300010044|Ga0126310_10976638All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium665Open in IMG/M
3300010166|Ga0126306_10732709Not Available794Open in IMG/M
3300010371|Ga0134125_11286602All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria798Open in IMG/M
3300010371|Ga0134125_11609966All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria707Open in IMG/M
3300010397|Ga0134124_10140986All Organisms → cellular organisms → Bacteria2140Open in IMG/M
3300010399|Ga0134127_11530342All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium740Open in IMG/M
3300010399|Ga0134127_12493103All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium597Open in IMG/M
3300010999|Ga0138505_100068039Not Available526Open in IMG/M
3300012892|Ga0157294_10150442All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium646Open in IMG/M
3300012897|Ga0157285_10113007All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria764Open in IMG/M
3300012904|Ga0157282_10241518All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium607Open in IMG/M
3300012913|Ga0157298_10194323All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium646Open in IMG/M
3300012939|Ga0162650_100013997All Organisms → cellular organisms → Bacteria → Terrabacteria group1083Open in IMG/M
3300012941|Ga0162652_100022942All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria886Open in IMG/M
3300012984|Ga0164309_10159037All Organisms → cellular organisms → Bacteria1511Open in IMG/M
3300012989|Ga0164305_11147150Not Available670Open in IMG/M
3300013297|Ga0157378_10267638All Organisms → cellular organisms → Bacteria1642Open in IMG/M
3300013306|Ga0163162_11130632All Organisms → cellular organisms → Bacteria888Open in IMG/M
3300017792|Ga0163161_11811911Not Available543Open in IMG/M
3300017965|Ga0190266_10490375All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium712Open in IMG/M
3300018028|Ga0184608_10392413All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium604Open in IMG/M
3300018054|Ga0184621_10014082All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2363Open in IMG/M
3300018061|Ga0184619_10101567All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1292Open in IMG/M
3300018073|Ga0184624_10322535Not Available692Open in IMG/M
3300018073|Ga0184624_10440433Not Available573Open in IMG/M
3300018081|Ga0184625_10653362All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium509Open in IMG/M
3300018422|Ga0190265_13737311All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium507Open in IMG/M
3300022534|Ga0224452_1028901All Organisms → cellular organisms → Bacteria1590Open in IMG/M
3300022694|Ga0222623_10423820All Organisms → cellular organisms → Bacteria → Terrabacteria group505Open in IMG/M
3300025919|Ga0207657_10686943All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria795Open in IMG/M
3300025925|Ga0207650_10327555All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1256Open in IMG/M
3300025938|Ga0207704_10696964All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium840Open in IMG/M
3300026089|Ga0207648_10526541All Organisms → cellular organisms → Bacteria1083Open in IMG/M
3300027006|Ga0209896_1017996All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium788Open in IMG/M
3300027561|Ga0209887_1045605All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria958Open in IMG/M
3300027695|Ga0209966_1124692All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium592Open in IMG/M
3300027876|Ga0209974_10139825All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria868Open in IMG/M
3300028717|Ga0307298_10164960All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria646Open in IMG/M
3300028719|Ga0307301_10054706All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1232Open in IMG/M
3300028719|Ga0307301_10117238All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria849Open in IMG/M
3300028722|Ga0307319_10089751All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium980Open in IMG/M
3300028722|Ga0307319_10234243All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium603Open in IMG/M
3300028744|Ga0307318_10280175All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria583Open in IMG/M
3300028754|Ga0307297_10200827Not Available697Open in IMG/M
3300028755|Ga0307316_10149840All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium831Open in IMG/M
3300028755|Ga0307316_10368851All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium529Open in IMG/M
3300028778|Ga0307288_10062606All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1302Open in IMG/M
3300028787|Ga0307323_10053274All Organisms → cellular organisms → Bacteria1427Open in IMG/M
3300028796|Ga0307287_10307486All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium599Open in IMG/M
3300028807|Ga0307305_10327985All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium695Open in IMG/M
3300028814|Ga0307302_10013497All Organisms → cellular organisms → Bacteria3662Open in IMG/M
3300028814|Ga0307302_10050341All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1938Open in IMG/M
3300028814|Ga0307302_10095389All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1417Open in IMG/M
3300028814|Ga0307302_10301822All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria787Open in IMG/M
3300028814|Ga0307302_10324245All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium759Open in IMG/M
3300028878|Ga0307278_10019698All Organisms → cellular organisms → Bacteria3125Open in IMG/M
3300028880|Ga0307300_10082353All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria951Open in IMG/M
3300031198|Ga0307500_10133358All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium696Open in IMG/M
3300031847|Ga0310907_10295672All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae813Open in IMG/M
3300031911|Ga0307412_10804882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria816Open in IMG/M
3300032126|Ga0307415_101974111All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium568Open in IMG/M
3300033417|Ga0214471_11412711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium524Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil28.16%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil10.68%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment5.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.83%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.85%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand4.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.88%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.88%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil2.91%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.94%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.94%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.94%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.94%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.94%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.94%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.94%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.97%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest0.97%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.97%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere0.97%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.97%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000858Soil microbial communities from Great Prairies - Wisconsin Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005981Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006573Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009819Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50EnvironmentalOpen in IMG/M
3300009823Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50EnvironmentalOpen in IMG/M
3300009837Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010999Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015EnvironmentalOpen in IMG/M
3300012892Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1EnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012904Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1EnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012939Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015EnvironmentalOpen in IMG/M
3300012941Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015EnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027006Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027561Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027695Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300028717Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028722Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028754Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300031198Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_SEnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300033417Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F14TC_10095407713300000559SoilMLEERRQRVLESLRDLAAQLQDALVEPAEKSRQEEGLMDALEIERR*
JGI10213J12805_1183457023300000858SoilRVVEGLRDLSAQLQDALVEPARQGRDEESLTDALDFERRR*
JGI10216J12902_10346211243300000956SoilREAKVLEDRRQRVLDGLRDLVAQLQDALVEPPRSDEESLVDALDVERRR*
JGI10216J12902_10588376023300000956SoilETLQREAKMLEERKQRVIESLRDVAAQIQDALVEPSRGEGANESLVEALDVEGRR*
F14TB_10033845923300001431SoilTLKREARMLEERRQRVLESLRDLAAQLQDALVEPVEKSRQEGLMDALEIERR*
Ga0062593_10118390833300004114SoilRRQRVLDGLRDLVAQLQDALVEPTRHDESLVDALDVDRRR*
Ga0062589_10145190223300004156SoilLEERRQRVLDGLRDLAAQLQDALVEPTSRDMDDSLADALDVERRR*
Ga0062592_10212393113300004480SoilNQIEEDARHRHESLVREAKSLEERRQRVLDGLRDLAAQLQDALVEPTSRDMDDSLADALDVERRR*
Ga0062594_10243069813300005093SoilVLESLRDLAAQIQDALVEPVEKSPESEELVDALDVERRR*
Ga0070661_10058530713300005344Corn RhizosphereRSLEERRQRVLDGLRDLAAQLQDALVEPTGRDVDESLADALDIERRR*
Ga0070669_10035180133300005353Switchgrass RhizosphereEERRQRVLDGLRDLAAQLQDALVEPTNRDMDESLADALDVERRR*
Ga0066682_1034704913300005450SoilRHETLQREAKMLEERKQRVLESLRDVAAQIQEALAEPAGEREELVDALDVEHRR*
Ga0070698_10052617513300005471Corn, Switchgrass And Miscanthus RhizosphereNQIEEDVRRRHESLAREAKSLEERRQRVLDGLRDLAAQLQDALVEPTSSETDQSLADALDVERRR*
Ga0070695_10076155733300005545Corn, Switchgrass And Miscanthus RhizosphereSLEERRQRVLDGLRDLAAQLQDALVEPTGRDVDESLADALDIERRR*
Ga0066695_10001743133300005553SoilMLEERKQRVLESLRDVAAQIQEALAEPAGEREELVDALDVEHRR*
Ga0068857_10015284813300005577Corn RhizosphereESLRDLAAQIQDALVEPVEKSPESEELVDALDVERRR*
Ga0068854_10143631713300005578Corn RhizosphereQIEADARRRHESLVREARSLEERRQRVLDGLRDLAAQLQDALVEPTSRDVDESLADALDIERRR*
Ga0081538_1011405913300005981Tabebuia Heterophylla RhizosphereRVLDSLRDLSAQLQDALVEPAETEREETILNALEVDRRR*
Ga0075432_1035258723300006058Populus RhizosphereEAKSLEERRQRVLDGLRDLAAQLQDALVEPPGRDMDESLADALDVERRR*
Ga0082029_177344113300006169Termite NestDARRRHESLVRQAKSLEERRQRVLDGLRDLAAQLQDALVEPPSREMDLADALDVERRR*
Ga0074055_1117291523300006573SoilETLQREMKMLEERKQRVLESLRDLAAQIQDALVEPAQRAAESEDLVDALDVERRR*
Ga0066665_1044184813300006796SoilEAKTLEERKQRALDGLRELSHQLQDALAEPAEAPQEESLVEALDVERRLS*
Ga0079216_1114189313300006918Agricultural SoilHELLQRESKALEERRQRVVEGLRDLSAQLQDALVEPPRGREEQSLADALDVERRR*
Ga0066710_10075541223300009012Grasslands SoilVLQREAKTLEERKQRALESMRELSHQLQDALAEPAEAPQEESLVEALDVERRLS
Ga0066710_10378234613300009012Grasslands SoilVLEGVGNLIAQLQDPRVEPSRSESDSLVEALDVERRR
Ga0066709_10034870743300009137Grasslands SoilEAKALEERRARVLDGLRDLAAQLQDALVEPAGSTPEDESLVDALDVDRRR*
Ga0066709_10046106633300009137Grasslands SoilVGQRHETLRREAKMLEERKQRVLESLRDVAAQLQDALAEPVKQAPDDESLVEALDVERRR
Ga0111538_1135580543300009156Populus RhizosphereGARRRHESLVREAKSLEERRQRVLDGLRDLAAQLQDALVEPSTRDMDDSLADALDVERRR
Ga0105241_1071066533300009174Corn RhizosphereGLRDLAAQLQDALVEPTSRDVDESLADALDIERRR*
Ga0105087_110067523300009819Groundwater SandMLEERKQRVLESLRDLAAQLQDALVGPQDKALEDESLVDALEVERRR*
Ga0105078_102791113300009823Groundwater SandHETLQREAKALEERRQRVLDGLRDLAAQLQDALVEPSRREDDLLVDALDVERRR*
Ga0105058_116286313300009837Groundwater SandSLRDLAAQIQDALVEPTERAPREDSLEDALEVERRR*
Ga0126313_10000297273300009840Serpentine SoilTLKREARMLEARRQRVLESLRDLAAQLQDALVEPVGKPPQEDVLMDALDIERRR*
Ga0126313_1015469543300009840Serpentine SoilTLKREARMLEARRQRVLESLRDLAAQLQDALVEPVGKPPQDEALMDALKVERR*
Ga0126313_1102400823300009840Serpentine SoilRRQRVLESLRDLAAQLQDALVEPTEKTPQDEALLDALDVERSR*
Ga0126305_1006152053300010036Serpentine SoilHRRHETLQRDAKALEERRQRVLDGLRDLAAQLQDALVEPSRREDDSLVDALDVERRR*
Ga0126305_1066775723300010036Serpentine SoilRHRMLKREARMLEERRQRVLEGLRDLSAQLQDALAEPAAEMPRDEALEDALSVERRR*
Ga0126304_1024524313300010037Serpentine SoilQRVLEGLRDLSAQLQDALAEPAAEMPRDEALEDALSVERRR*
Ga0126304_1030905233300010037Serpentine SoilERRQRVLDGLRDLAAQLQDALVEPTSSETDHSLADALDVERRR*
Ga0126308_1044560413300010040Serpentine SoilTLKREARMLEERRQRVLDSLRDLAAQLQDALVEPIESAPQDEAMMDALDVQQRR*
Ga0126310_1037937313300010044Serpentine SoilHESLVREARSLEERRQRVLDGLRDLAAQLQDALVEPTSRDVDDSLADALDVERRR*
Ga0126310_1097663813300010044Serpentine SoilEGARRRHESLVREAKSLEERRQRVLDGLRDLAAQLQDALVEPASGEIDQSLADALDVERRR*
Ga0126306_1073270923300010166Serpentine SoilQRVLESLRDLAAQLQDALVEPVGKPPQDEALMDALKVERR*
Ga0134125_1128660233300010371Terrestrial SoilDGLRDLAAQLQDALVEPTSRDVDESLADALDVERRR*
Ga0134125_1160996613300010371Terrestrial SoilRDVKALEERKHRVLESLRDVSAQLQEALAAPAEEDESLLDALEVERRR*
Ga0134124_1014098643300010397Terrestrial SoilRVLDGLRDLAAQLQDALVEPTSRDVDESLADALDIERRR*
Ga0134127_1153034213300010399Terrestrial SoilRQRVLDGLRDLAAQLQDALVEPTNRETDQSLADALDVERRR*
Ga0134127_1249310323300010399Terrestrial SoilREAKSLEERRQRVLDGLRDLAAQLQDALVEPTNRDMDESLADALDIERRR*
Ga0138505_10006803923300010999SoilMLEERRQRVLESLRDLAAQLQDALVEPVEKSRQEEGLMDALEIERR*
Ga0157294_1015044223300012892SoilVEERRQRVLDGLRDLAAQLQDALVEPPGRDMDESLADALDVERRR*
Ga0157285_1011300733300012897SoilEESARRGHESLVREAKSLEERRQRGLDGPRDLAAQLQDALVEPTNRETDQSLADALDVERRR*
Ga0157282_1024151813300012904SoilQIEADARRRHESLVREAKSLEERRQRVLDGLRDLAAQLQDALVEPTSRDVDESLADALDIERRR*
Ga0157298_1019432323300012913SoilQRVLDGLRDLAAQLQDALVEPTSKDMDQSLADALDVERRR*
Ga0162650_10001399713300012939SoilRQRVLESLRDLAAQLQDALVEPVEKSRQEEGLMDALEIERR*
Ga0162652_10002294213300012941SoilLRDLAAQLQDALVEPTNRDMDQSLGDALDVERRR*
Ga0164309_1015903713300012984SoilQRVLESLRDLAAQIQDALVEPVAKAPESEELMEALEVERGR*
Ga0164305_1114715023300012989SoilKQRVLESLRDLAAQIQDALVEPVAKAPESEELMEALEVERGR*
Ga0157378_1026763813300013297Miscanthus RhizosphereIEEGAQRSHESLVREAKSLEERRQRVLDGLRDLAAQLQDALVEPTNRETDQSLADALDVERRR*
Ga0163162_1113063233300013306Switchgrass RhizosphereEALIRESKALDELRQPVLDGLRDLAAQLQDALVEPTNRDMDESLADALDVERRR*
Ga0163161_1181191113300017792Switchgrass RhizosphereREAKSLEERRQRVLDGLRDLAAQLQDALVEPTNRETDHSLADALDVERRR
Ga0190266_1049037523300017965SoilMANKIEADARRRHESLVREAKSLEERRQRVLDGLRDLAAQLQDALVEPTNRKMDESLADALDVERRR
Ga0184608_1039241313300018028Groundwater SedimentRVLDGLRDLAAQLQDALVEPSRREDDSLADALDVERRR
Ga0184621_1001408213300018054Groundwater SedimentQIQADAHRRHETLQREAKALEERRQRVLYGLRDLAAQLQDALVEPSRREDDSLVDALDVEHRR
Ga0184619_1010156743300018061Groundwater SedimentLRREAKMLEERNQRVLEGLRDLAAQLQDALVESPQQAPQEESLVDALDVERRG
Ga0184624_1032253523300018073Groundwater SedimentRVLESLRDLAAQIQDALVEPAVRVPESEELVDALDIEHRR
Ga0184624_1044043313300018073Groundwater SedimentRKQRVLESLRDVAAQIQEALAEPTPSNESLVDALEVERR
Ga0184625_1065336213300018081Groundwater SedimentAKMLEERRQRVLESLRDLAAQLQDALVEPAEMARQDESLVDALDVDRRR
Ga0190265_1373731113300018422SoilLEERKQRVLESLRDLAAQLQDALVEPVEMARQDESLVDALDVDRRR
Ga0224452_102890153300022534Groundwater SedimentLEGLRDLAAQLQDALVGSPEQAPQEESLVDALDVDRRR
Ga0222623_1042382013300022694Groundwater SedimentMLEERRQRVLESLRDLAAQLQDALVEPAETAPQEEALVDALNVERRR
Ga0207657_1068694323300025919Corn RhizosphereREAKSLEERRQRVLDGLRDLAAQLQDALVEPSTRDMDDSLADALDVERRR
Ga0207650_1032755533300025925Switchgrass RhizosphereRRQRVLDGLRDLAAQLQDALVEPTNRETDQSLADALDVERRR
Ga0207704_1069696433300025938Miscanthus RhizosphereESLVREAKSLEERRQRVLDGLRDLAAQLQDALVEPTNRETDQSLADALDVERRR
Ga0207648_1052654133300026089Miscanthus RhizosphereSHESLVREAKTLEERRQRVLDGLRDLAAQLQDALVEPTNRETDQSLADALDVERRR
Ga0209896_101799613300027006Groundwater SandEERRQRVLDGLRDLAAQLQDALVEPSRREDDSLVDALDVERRR
Ga0209887_104560513300027561Groundwater SandEARRRHELLQRESKALEERRHRVLEGLRDLSAQLQDALVEPARGREQESLADALDIERRR
Ga0209966_112469223300027695Arabidopsis Thaliana RhizosphereDVRRRHESLVREAKSLEERRQRVLDGLRDLAAQLQDALVEPTSKDMDQSLADALDVERRR
Ga0209974_1013982533300027876Arabidopsis Thaliana RhizosphereKSLEERRQRVLDGLRDLAAQLQDALVEPTSRDVDESLADALDIERRR
Ga0307298_1016496023300028717SoilLESLRDLAAQIQDALVEPADKAPESEELVDALDVERRR
Ga0307301_1005470643300028719SoilQRVLESLRDLAAQLQDALVEPTEKAPQDDALLDALDVERSR
Ga0307301_1011723833300028719SoilQIKEGAQRRHESLVREAKSLEERRLRVLDGLRDLAAQLQDALVEPTSRDADDSLADALDVERRR
Ga0307319_1008975133300028722SoilQRVLDGLRDLAAQLQDALVEPSRREDDSLVDALDVERRR
Ga0307319_1023424313300028722SoilKALEERRQRVLESLRDLVAQLQDALVEPTRHEESLVDALDVDSRR
Ga0307318_1028017523300028744SoilTLKREARMLEERRQRVLESLRDLAAQLQDALVEPAEKPPRDEALVDVLNVERRH
Ga0307297_1020082723300028754SoilEAKMLEERKKQVLESLRDLAAQLQDALSEEPQGVPQSESLVDALEVQRNR
Ga0307316_1014984013300028755SoilQIESDARRRHESLVREAKSLEERRQRVLDGLRDLAAQLQDALVEPTSRDVDDSLADALDIERRR
Ga0307316_1036885113300028755SoilSLVREAKSLEERRLRVLDGLRDLAAQLQDALVEPTSRDADDSLADALDVERRR
Ga0307288_1006260633300028778SoilLVREAKSLEERRQRVLDGLRDLAAQLQDALVEPTSRDVDDSLADALDIERRR
Ga0307323_1005327443300028787SoilREMKMLEERKQRVLESLRDLAAQIQDALVEPADKAPESEELVDALDVERRR
Ga0307287_1030748613300028796SoilIQADAHRRHETLQREAKALEERRQRVLDGLRDLAAQLQDALVEPSRHEDDSLVDALDVERRR
Ga0307305_1032798533300028807SoilLEERRLRVLDGLRDLAAQLQDALVEPTSRDADDSLADALDVERRR
Ga0307302_1001349713300028814SoilLESLRDLAAQLQDALVEPAETAPQEEALVDALNVERR
Ga0307302_1005034113300028814SoilAHRRHETLQREAKALEERRQRVLYGLRDLAAQLQDALVEPSRREDDSLVDALDVERRR
Ga0307302_1009538943300028814SoilRVLEGLRDLAAQLQDALVGSPEQAPQEESLVDALDVDRRR
Ga0307302_1030182233300028814SoilHRRHETLQREAKALEERRQRVLESLRDLVAQLQDALVEPTRHEESLVDALDVDSRR
Ga0307302_1032424513300028814SoilENLQREAKALEERRQRVLDGLRDLAAQLQDALVEPSRREDDSLVDALDVERRR
Ga0307278_1001969853300028878SoilLEARKQRVLESLRDVAAQLQDALVEPPETAQEESLVDALDVERRR
Ga0307300_1008235313300028880SoilEDVRRRHESLVREAKSLEERRQRVLDGLRDLAAQLQDALVEPTSKDMDQSLADALDVERR
Ga0307500_1013335823300031198SoilHESLVREAKSLEERRQRVLDGLRDLAAQLQDALVEPTSRGTDQSLADALDVERRR
Ga0310907_1029567233300031847SoilDVRRRHESLAREAKSLEERRQRVLDGLRDLAAQLQDALVEPTNRDMDQSLADALDVERRR
Ga0307412_1080488213300031911RhizosphereEAKSLEERRQRVLDGLRDLAAQLQDALVEPTSRDMDQSLADALDVERRR
Ga0307415_10197411113300032126RhizosphereFRDLAAQIQDALVEPVERAPQGEELVDALDVERRS
Ga0214471_1141271123300033417SoilALEARRQRVVDGLRDLAAQLQDALIEPERREDESLVDVLDVERRR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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