Metagenome Family F099895

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099895
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	115 residues
Representative Sequence	MRSRFEYEAPSFLQKATLTLKAPHRWRSSVRPWVFDKKSGVRFQLAEDEETALHPVTRRMKNGSIPLPVTVAFDQVASAIMNRRCGYCFEWNRLARRTPAEWESWLDDGLRRLRW
Number of Associated Samples	59
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	66.02 %
% of genes near scaffold ends (potentially truncated)	34.95 %
% of genes from short scaffolds (< 2000 bps)	90.29 %
Associated GOLD sequencing projects	54
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (76.699 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds (31.068 % of family members)
Environment Ontology (ENVO)	Unclassified (55.340 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (31.068 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.85% β-sheet: 8.39% Coil/Unstructured: 44.76%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF04519	Bactofilin	6.80
PF00072	Response_reg	2.91
PF13414	TPR_11	1.94
PF13365	Trypsin_2	1.94
PF03729	DUF308	0.97
PF06863	DUF1254	0.97
PF00582	Usp	0.97
PF01258	zf-dskA_traR	0.97
PF05050	Methyltransf_21	0.97
PF02861	Clp_N	0.97
PF02586	SRAP	0.97
PF06742	DUF1214	0.97
PF00656	Peptidase_C14	0.97
PF00484	Pro_CA	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	6.80
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	1.94
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.97
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.97
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	0.97
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.97
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.97
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	0.97
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.70 %
All Organisms	root	All Organisms	23.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.70 %
cellular organisms	root	All Organisms → cellular organisms	22.33 %
Viruses	superkingdom	All Organisms → Viruses	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.70 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	22.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12.62 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.80 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.94 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.70 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	4.85 %
Alphaproteobacteria bacterium BRH_c36	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium BRH_c36	1.94 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.97 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.70 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	4.85 %
Alphaproteobacteria bacterium BRH_c36	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium BRH_c36	1.94 %
Methylocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa	0.97 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.70 %
unclassified Hyphomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium	3.88 %
Alphaproteobacteria bacterium BRH_c36	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium BRH_c36	1.94 %
Hyphomicrobium sulfonivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans	0.97 %
unclassified Methylocapsa	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → unclassified Methylocapsa	0.97 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.70 %
Hyphomicrobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	3.88 %
Alphaproteobacteria bacterium BRH_c36	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium BRH_c36	1.94 %
Methylocapsa sp. S129	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → unclassified Methylocapsa → Methylocapsa sp. S129	0.97 %
Hyphomicrobium sulfonivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans	0.97 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_106700821	Not Available	580	Open in IMG/M
3300005434\|Ga0070709_11152404	Not Available	622	Open in IMG/M
3300005436\|Ga0070713_101690703	Not Available	614	Open in IMG/M
3300005437\|Ga0070710_10391819	Not Available	929	Open in IMG/M
3300005445\|Ga0070708_100946245	Not Available	808	Open in IMG/M
3300005536\|Ga0070697_101921014	Not Available	530	Open in IMG/M
3300006041\|Ga0075023_100522553	Not Available	538	Open in IMG/M
3300006050\|Ga0075028_100525593	Not Available	694	Open in IMG/M
3300006050\|Ga0075028_101040141	Not Available	511	Open in IMG/M
3300006052\|Ga0075029_100051897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2377	Open in IMG/M
3300006052\|Ga0075029_100055075	All Organisms → cellular organisms → Bacteria	2311	Open in IMG/M
3300006052\|Ga0075029_100204845	Not Available	1233	Open in IMG/M
3300006052\|Ga0075029_100214674	Not Available	1205	Open in IMG/M
3300006052\|Ga0075029_100234137	Not Available	1156	Open in IMG/M
3300006052\|Ga0075029_100257914	All Organisms → Viruses → Predicted Viral	1103	Open in IMG/M
3300006052\|Ga0075029_100557336	Not Available	762	Open in IMG/M
3300006057\|Ga0075026_100007354	All Organisms → cellular organisms → Bacteria	4701	Open in IMG/M
3300006057\|Ga0075026_100609994	Not Available	642	Open in IMG/M
3300006059\|Ga0075017_100010754	All Organisms → cellular organisms → Bacteria	5819	Open in IMG/M
3300006059\|Ga0075017_100203000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	1434	Open in IMG/M
3300006059\|Ga0075017_100817479	Not Available	721	Open in IMG/M
3300006059\|Ga0075017_101421925	Not Available	546	Open in IMG/M
3300006086\|Ga0075019_10469696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	777	Open in IMG/M
3300006102\|Ga0075015_100078225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → unclassified Methylocapsa → Methylocapsa sp. S129	1624	Open in IMG/M
3300006163\|Ga0070715_11065474	Not Available	507	Open in IMG/M
3300006172\|Ga0075018_10406639	Not Available	693	Open in IMG/M
3300006173\|Ga0070716_100399528	Not Available	988	Open in IMG/M
3300006174\|Ga0075014_100056190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	1710	Open in IMG/M
3300006174\|Ga0075014_100287716	Not Available	862	Open in IMG/M
3300006174\|Ga0075014_100570021	Not Available	643	Open in IMG/M
3300006354\|Ga0075021_10348846	Not Available	923	Open in IMG/M
3300006354\|Ga0075021_10383037	Not Available	880	Open in IMG/M
3300006904\|Ga0075424_102056123	Not Available	602	Open in IMG/M
3300010379\|Ga0136449_101013628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	1334	Open in IMG/M
3300010379\|Ga0136449_102170942	Not Available	811	Open in IMG/M
3300012212\|Ga0150985_110690725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2115	Open in IMG/M
3300012212\|Ga0150985_119867050	Not Available	1412	Open in IMG/M
3300012469\|Ga0150984_102014615	Not Available	725	Open in IMG/M
3300012984\|Ga0164309_11898874	Not Available	511	Open in IMG/M
3300012989\|Ga0164305_11247273	Not Available	647	Open in IMG/M
3300013297\|Ga0157378_11020256	Not Available	862	Open in IMG/M
3300013297\|Ga0157378_11473556	Not Available	725	Open in IMG/M
3300015371\|Ga0132258_10849940	Not Available	2303	Open in IMG/M
3300015371\|Ga0132258_11842580	Not Available	1524	Open in IMG/M
3300015371\|Ga0132258_12422363	All Organisms → cellular organisms → Bacteria → Proteobacteria	1314	Open in IMG/M
3300015371\|Ga0132258_12853008	Not Available	1202	Open in IMG/M
3300015371\|Ga0132258_13621003	Not Available	1056	Open in IMG/M
3300015371\|Ga0132258_13661687	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300015372\|Ga0132256_102607738	Not Available	606	Open in IMG/M
3300015374\|Ga0132255_102136959	Not Available	853	Open in IMG/M
3300017821\|Ga0187812_1030283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1850	Open in IMG/M
3300017821\|Ga0187812_1090432	Not Available	1004	Open in IMG/M
3300017821\|Ga0187812_1106800	Not Available	913	Open in IMG/M
3300017822\|Ga0187802_10198445	Not Available	771	Open in IMG/M
3300017823\|Ga0187818_10227369	Not Available	815	Open in IMG/M
3300017823\|Ga0187818_10341485	Not Available	660	Open in IMG/M
3300017928\|Ga0187806_1059389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1174	Open in IMG/M
3300017932\|Ga0187814_10123415	Not Available	961	Open in IMG/M
3300017932\|Ga0187814_10291534	Not Available	623	Open in IMG/M
3300017933\|Ga0187801_10296411	Not Available	657	Open in IMG/M
3300017933\|Ga0187801_10381671	Not Available	583	Open in IMG/M
3300017934\|Ga0187803_10212753	Not Available	763	Open in IMG/M
3300017937\|Ga0187809_10023674	Not Available	1958	Open in IMG/M
3300017937\|Ga0187809_10130073	Not Available	860	Open in IMG/M
3300017937\|Ga0187809_10407912	Not Available	519	Open in IMG/M
3300017943\|Ga0187819_10044967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium BRH_c36	2614	Open in IMG/M
3300017943\|Ga0187819_10059445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans	2270	Open in IMG/M
3300017943\|Ga0187819_10106217	Not Available	1676	Open in IMG/M
3300017943\|Ga0187819_10259757	Not Available	1015	Open in IMG/M
3300017943\|Ga0187819_10640290	Not Available	601	Open in IMG/M
3300017955\|Ga0187817_10007780	All Organisms → cellular organisms → Bacteria	6015	Open in IMG/M
3300017955\|Ga0187817_10041845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium BRH_c36	2804	Open in IMG/M
3300017959\|Ga0187779_11346129	Not Available	507	Open in IMG/M
3300017961\|Ga0187778_11177648	Not Available	536	Open in IMG/M
3300017966\|Ga0187776_11052733	Not Available	601	Open in IMG/M
3300017973\|Ga0187780_10127817	Not Available	1757	Open in IMG/M
3300017973\|Ga0187780_11127488	Not Available	574	Open in IMG/M
3300017974\|Ga0187777_10107000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1842	Open in IMG/M
3300017974\|Ga0187777_10171810	Not Available	1453	Open in IMG/M
3300017974\|Ga0187777_10290152	Not Available	1117	Open in IMG/M
3300017974\|Ga0187777_11210110	Not Available	553	Open in IMG/M
3300017995\|Ga0187816_10132162	Not Available	1077	Open in IMG/M
3300018001\|Ga0187815_10103499	Not Available	1201	Open in IMG/M
3300018007\|Ga0187805_10574195	Not Available	532	Open in IMG/M
3300018058\|Ga0187766_10849636	Not Available	641	Open in IMG/M
3300021178\|Ga0210408_11237840	Not Available	569	Open in IMG/M
3300025898\|Ga0207692_10945913	Not Available	568	Open in IMG/M
3300025906\|Ga0207699_11159883	Not Available	572	Open in IMG/M
3300027703\|Ga0207862_1243514	Not Available	528	Open in IMG/M
3300027894\|Ga0209068_10143520	Not Available	1288	Open in IMG/M
3300027894\|Ga0209068_10598878	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300027898\|Ga0209067_10063577	All Organisms → cellular organisms → Bacteria	1889	Open in IMG/M
3300027898\|Ga0209067_10127556	Not Available	1338	Open in IMG/M
3300027898\|Ga0209067_10342167	Not Available	829	Open in IMG/M
3300027898\|Ga0209067_10598683	Not Available	633	Open in IMG/M
3300027911\|Ga0209698_10605748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	841	Open in IMG/M
3300027915\|Ga0209069_10134130	All Organisms → cellular organisms → Bacteria → Proteobacteria	1219	Open in IMG/M
3300032829\|Ga0335070_11927224	Not Available	533	Open in IMG/M
3300032892\|Ga0335081_11061643	Not Available	937	Open in IMG/M
3300032892\|Ga0335081_12195052	Not Available	582	Open in IMG/M
3300032893\|Ga0335069_12006049	Not Available	610	Open in IMG/M
3300032893\|Ga0335069_12690642	Not Available	512	Open in IMG/M
3300033158\|Ga0335077_11285575	Not Available	712	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.41%
Host-Associated	Host-Associated	13.59%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	55.34%
Terrestrial	Environmental → Terrestrial	31.07%
Plants	Host-Associated → Plants	13.59%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Sediment	31.07%
Soil	Environmental → Terrestrial → Soil	31.07%
Freshwater	Environmental → Aquatic → Freshwater	24.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified	31.07%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	24.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.53%
Loam	Environmental → Terrestrial → Soil → Loam	10.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	4.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	31.07%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	24.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	15.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.97%

Habitat	Taxonomy	Distribution
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	31.07%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	24.27%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	9.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	6.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.94%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.94%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.97%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1067008212	3300005332	Tropical Forest Soil	GCVMRSRFAYQAPGLLEKTLIIIKAPHRWPASARPWLFDKQSGIRFQLAKDEQVALRPLTAHLRNGSTSPEAAIAFDQVGDAVLNRRRGYYFEWNRLSQHTAADWSDRLSEKTTR*
Ga0070709_111524041	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MCSFRFSLRVYILSGVHEAVMRSRFEYEAPGLLKKAALTLKAPHKWRSRVRPWVFDKKSGVRFQLDADEHAVLKPLTSRIKNGSTSLEVAVAFDQVADAIMGRRRGYCFEWNRLADRTSAEWENWLSGSLRRLRW*
Ga0070713_1016907031	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRSRFEYEAPGLLKKAALTLKAPHKWRSRVRPWVFDKKSGVRFQLDADEHAVLKPLTSRIKNGSTSLEVAVAFDQVADAIMGRRLGYCFEWNRLAERTSAEWENWLSGSLRRLRW*
Ga0070710_103918191	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MHSRFEYEAPSLLKKAAVTLKAPHKWRSRVRPWVFDKKSGVRFQLDADEHAALKPLTSRIKNGSTSLEVAVAFDQVADAIMGRRRGYCFEWNRLADRTSAEWENWLSGSLRRLRW*
Ga0070708_1009462451	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RAPHKWRSRVRPWVFDKQSGVRFQLDADEHAALKPLTSRIKNGSTSLEVGVAFDQVADAIMARRRGYCFEWNHLADRTSAEWENWLSGSLRRLRW*
Ga0070697_1019210141	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRSRFEYEAPGLLKKAALTLRAPHKWRSRVRPWVFDKQSGVRFQLDAAEHAALKPLTSRIKNGSTSLEVAVAFDQVADAMMARRRGYCFEWNRLAERTSAEWENWLSGSLRR
Ga0075023_1005225531	3300006041	Watersheds	NLCVAAVPTTRMLLPNSALVVMYMQPPVYILTQVHGGSVMRSRFEYEAPGLIKKAALTIKAPHRWRARVRPWVFDKQSGVRFQLSDDEHAALMPLTSRLANGSTPLEVAVAFDQAASAMMDRRRGYCFEWDRLAKRTPAEWDSWLSGSLRRLRW*
Ga0075028_1005255932	3300006050	Watersheds	MRSRFEYEAPSFLQKATLTLKAPHRWRSSVRPWVFDKKSGVRFQLAEDEETALRPVTRRMKNGSTPLPVAVAFDQVASAIMNRRCGYGFEWDRLARRKPTEWDSWLDDGLRRLRW
Ga0075028_1010401411	3300006050	Watersheds	MQPLAYILAQVHGGSVMRSRFEYEAPNLLVKAALTLKAPHRWRSRLRPWVFDKKSGVRFQLAEDEDAALKPLTSRMKNGGTPCEVATAFDHVAAAIMDRRCGYCFEWNRLAKQTTAEWNDLLGEESGH*
Ga0075029_1000518972	3300006052	Watersheds	MRSRFEYEAPSFLQKATLTLKAPHRWRSSVRPWVFDKKSGVRFQLAEDEEPALRPVTRRMKNGSTPLPVAVAFDQVASAIMNRRCGYGFEWDRLARRKPTEWDSWLDDGLRRLRW*
Ga0075029_1000550752	3300006052	Watersheds	MRSRFEYEAPGLLKKTVITIKAPHRWRSGVRPWVFDKQSGVRFQLAKDEQAVLQPLTSRLRNGSTPPEVAIAFDHLAHAMLERRRGYCFEWNRLAKQTAAEWNDRLSERNAR*
Ga0075029_1002048452	3300006052	Watersheds	MCSRFEYEAPSFLQKATLTLTAPHRWRSRVRPWVFDKKSGVRFQLARDEETTLQPLTRRITNGTTHVPIAVAFDHAASALLDRRRGYCFEWQRLARRTPAEWDACLDAGLRRLRW*
Ga0075029_1002146741	3300006052	Watersheds	MHSRFEYETPSFLQKATLTLTAPHRWRSSVRPWVFDKKSGVRFQLAKDEEAALQPLTRRIRNGSTPVPIAVAFDHAASALLDRRRGYCFEWNR
Ga0075029_1002341371	3300006052	Watersheds	TGGSVIRSRFEYEAPNLLKKAAPTIKAPHRWRPRLRPWVFDKRSGVRFQLVADEDAALRPLTSRMRNGSTLPEVAAAFDHVAAAIMDRRRGYCYEWNRLAKQSAADWNARLGEENGR*
Ga0075029_1002579142	3300006052	Watersheds	MRSRFEYEAPSFFRKATLTLKAPHRWRSNVRPWVFDKKSGVRFQLAEDEETALRPVTRRMRNGSTALPVVVAFDQVAEAMMDRRRGYCFEWNRFARRTPAEWNNWLDDGLRRLRW*
Ga0075029_1005573361	3300006052	Watersheds	MRSRFEYEAPGLIKKAALTLKAPHRWRSEVRPWVFDNKSGVRFQLAQDEQAALMPVTSRIRNGSTSLPVAVAFDEAAEAIMNRRRGYCFEWNRLARRTPGDWDRWLSGGLRRLRW*
Ga0075026_1000073546	3300006057	Watersheds	MRSRFECQVPSFLKKASLIIGAPHRWRSEVRPWVFDKKSGVRFQLSQDEHAALRPLTSRMRNGRMSLPVTVAFDQVAKAIMDRRRGYCFEWDRLAQRTPGDWDRWLSGSLRRLRW*
Ga0075026_1006099941	3300006057	Watersheds	MRSRFEYEAPSFFRKATLTLKAPHRWRSNVRPWVFDKKSGARFQLAEDEEAALQPLTRRIRNGGTALPVVVAFDQVAEAMMDRRRGYCFEWNRFAPPNTG*
Ga0075017_1000107546	3300006059	Watersheds	MRFQFEFEAPSLLKKVALTIKAPHQWRSRVRPWVFDKKSGVRFQLAQDEHATLRPLTCHMQNGSARLEVAVAFDQAAGAIMDRRRGYCFEWNRLAKRTPAEWDSWLSGGLRRLRW*
Ga0075017_1002030004	3300006059	Watersheds	MRCQFEYEAPSLRRKVALTLKAPHKWRSRVRPWVFDKKSSARFQLAEDEHSALRPLTLRMRNGSPSLPAAVAFDEAAAAIMDRRRGYCFEWDHLAKRTPAEWESWLNGGLRRLR*
Ga0075017_1008174791	3300006059	Watersheds	MRSRFEYEALSFFRKATLTLKAPHRWRSNVRPWVFDKKSGVRFQLAEDEETALRPVTRRMRNGSTALPVVVAFDQVAEAMMDRRRGYCFEWNRFARRTPAEWNNWLDDGLRRLRW*
Ga0075017_1014219252	3300006059	Watersheds	VLLNFANVIMYVQPQCTTSAGYTGSVMRSRFEFEAPSLLKKVALTIKAPHQWRSRVRPWVFDKKSGVRFQLAQDEHAALKPLTGHMRNGSTRLEVAVAFDHAAGAIMARRRGYCFE
Ga0075019_104696962	3300006086	Watersheds	MRSRFEYEAPSFLQKATLTLTAPHRWRSRVRPWVFDKESGVRFQLARDEETTLQPLTRRITNGTTHVPIAVAFDHAASALLDRRRGYCFEWQRLARRTPAEWDACLDAGLRRLRW*
Ga0075015_1000782252	3300006102	Watersheds	MRSRFEYEAPSFLQKATLTLKAPHRWRSSVRPWVFDKKSGVRFQLAEDEETALRPVTRRMKNGSTPLPVAVAFDQVASAIMNRRCGYGFEWDRLARRKPTEWDSWLDDGLRRLRW*
Ga0070715_110654741	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MRFEYQPPSILQKATLTLKAPHRWRSNVRPWVFDKKSGARFQLAKDEEVALQPLTRRITDGTTHVPIAAAFDHAASALLDRRRGYCFEWQRLATRTPADWDACLDAG
Ga0075018_104066392	3300006172	Watersheds	MCSRFEYEAPSFLQKATLTLTAPHRWRSSVRPWVFDKKSGVRFQLAKDEETALQPLTRRITNGTTHVPIAVAFDHAASALLDRRRGYCFEWQRLATRTPADWDACLDAGLRRLRW*
Ga0070716_1003995281	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRFEYQSPSVLQKATLTLKAPHRWRSSVRPWVFDKKSGVRFQLAKDEETALQPLTLRITNGTTHVPIAVAFDHAASALLDRRRGYCFEWQRLATRTPADWDACLDAGLRRLRW*
Ga0075014_1000561902	3300006174	Watersheds	MCSRFEYEAPSFLQKATLTLTAPHRWRSRVRPWVFDKESGVRFQLARDEETTLQPLTRRITNGTTHVPIAVAFDHAASALLDRRRGYCFEWQRLARRTPAEWDACLDAGLRRLRW*
Ga0075014_1002877162	3300006174	Watersheds	MRSRFEYEAPSFFRKATLTLKAPHRWRSNVRPWVFDKKSGARFQLAEDEEAALQPLTQRIRNGGTALPVVVAFDQVAEAMMDRRRGYCFEWNRFARRTPAEWNNWLDDGLRRLRW*
Ga0075014_1005700211	3300006174	Watersheds	MHPGFEYQAPSLLEKATLAIKAPHHWRSRARPWVFDKKNGVRVQLSKDEQVALKPLTSRMRNCSTPLPVAVAFDQVAEAMMARRRGYCFEWNHLAERTPAEWDRWLGGAQRWLRW*
Ga0075021_103488462	3300006354	Watersheds	MRSRFEYEAPSFLQKATLTLKAPHRWRSSVRPWVFDRKSGVRFQLAEDEETALRPVTRRMKNGSTPLPVAVAFDQVASAIMNRRCGYGFEWDRLARRKPTEWDSWLDDGLRRLRW*
Ga0075021_103830372	3300006354	Watersheds	LVMRSRFEYEAPGLLKKTAITIKAPHRWRSGVRPWVFDKQSGVRFQLAKDEQVVLQPLTSRLRNGSTPPEVAIAFDHVAHAMLERRRGYCFEWNRLAQQTTAEWNDRLSERNAR*
Ga0075424_1020561232	3300006904	Populus Rhizosphere	MHQRFAFEAPSLRRKVALTLKAPLRWRSEICPWVFDKKSGARFQMTEAEDAALRPLTSRRKNGDTRFEVATAFDEAADALMERRCGYCFEWNRLAQRTPADWEDWLSGSLRRLRW*
Ga0136449_1010136282	3300010379	Peatlands Soil	MRSRFEFEAPSLLKKVALTIKAPHQWRSRVRPWVFDKKSGVRFQLAKDEHVSLRPLTSRLANDSTPLEVAVAFDQAAGAIMDRRRGYCFEWNRLAKRTPAEWDSWLSGGLRRLRW*
Ga0136449_1021709421	3300010379	Peatlands Soil	MRSRFEFEAPSLLKKVALTIKAPHQWRSRVRPWVFDKKSGVRFQLAQDEHAALKPLACHMQNGSTRLEVAVAFDQAAGAIMDRRRGYCFEWNRLAKRTPAEWDSWLSGGLRRLRW*
Ga0150985_1106907253	3300012212	Avena Fatua Rhizosphere	MRSRFEYEAPGLLKKAALTLKAPHKWRSRVRPWVFDKKSGVRFQLDADEHAVLKPLTSRIKNGSTSLEVAVAFDQVADAIMGRRRGYCFEWNRLADRTSAEWENWLSGSLRRLRW*
Ga0150985_1198670502	3300012212	Avena Fatua Rhizosphere	MRFEYQPPSLFQKATLTFKAPHRWRSSVRPWVFDKKSGVRFQLAKDEETALQPLTRRITNGTTHVPIAVAFDHAASALLDRRRGYCFEWQRLAARTPADWDACLDAGLRRLRW*
Ga0150984_1020146152	3300012469	Avena Fatua Rhizosphere	MRSRFEYEAPSLLKKAALTLKAPHKWRSRVRPWVFDKKSGVRFQLDADEHAALKPLTSRIKNGSTSLEVAVAFDQVADAIMGRRRGYCFEWNRLADRTSA
Ga0164309_118988742	3300012984	Soil	MRSRFEYEAPGLLKKAALTLKAPHRWRSRVRPWVFDKKSGVRFQLDADEHAVLKPLTSRIKNGSTSLEVAVAFDQVADAIMGRRRGYCFEWNRLADRTSAEWENWLSGSLRRLRW*
Ga0164305_112472731	3300012989	Soil	MRSRFEYEAPGLLKKAALTLKAPHKWRSRVRPWVFDKKSGVRFQLDADEHAVLKPLTSRIKNGSTSFEVAVAFDQVADAIMGRRRGYCFEWNRLADRTSAEWENWLSGSLRRLRW*
Ga0157378_110202561	3300013297	Miscanthus Rhizosphere	APLRWRSEICPWVFDKKSGARFQMTEAEDAALRPLTSRRKNGDTRFEVATAFDEAADALMERRCGYCFEWNRLAQRTPADWEDWLSGSLRRLRW*
Ga0157378_114735562	3300013297	Miscanthus Rhizosphere	MRSRFEYEAPSLRQTATLTLRAPLHWRTHRRPWVFDKKSGVRFQLAKDEEAALQPLTRRITNGSTPIPIAVAFDHAASALLDRRLGYSSEWERLARRTPADWNSCLDAGLRRLRW*
Ga0132258_108499402	3300015371	Arabidopsis Rhizosphere	MHQRFAYEAPSLRRKVALALKSPHRWRSEVQPWVFDKKSGARFQMAEAEDAALRPLTSRLKNGDTRFDVATAFDEAADALMDRRCGYCFEWDRLSQSTPSEWEAWLSGSLRRLRW*
Ga0132258_118425802	3300015371	Arabidopsis Rhizosphere	MRSRFEYEVPSFVQKAAATLKAPHHWRSHRRPWVFDKKSGVRFQLAEDEEATLRPLTRRIANGSTPIPIAIAFDCVASALLDRRRGYCFEWQRLAQRTSADWDSCLDAGLRRLRW*
Ga0132258_124223632	3300015371	Arabidopsis Rhizosphere	MRSRFEYEAPGFLQKATLTIKAPRQWRSHGRPWVFDKKSGVRFQLAKDEEVALRPLTCRLTNGTTPIPIAVAFDHVASALLDWRLGYCCEWQRLAQRTPADWDSCLDAGLRRLRW*
Ga0132258_128530082	3300015371	Arabidopsis Rhizosphere	MRSRFEYQAPGLLEKTLLIIKAPHRWPASARPWLFDKQSGVRFQLAKDEQAALRPLTAHLRNATPEVAIAFDQVGDAVLNRRRGYCFEWNRFSKQTAADWSDRLSEKTAR*
Ga0132258_136210031	3300015371	Arabidopsis Rhizosphere	MRSRFEYEVPGFLQKTTLTIKAPRQWRYHARAWIFDKKSGVRFQLAKDEEVALRPLTSRLTNGTTPVPITVAFDHATSALLDRRLGYCCEWQRLAQRTSADWDSCLDAGLRRVRW*
Ga0132258_136616871	3300015371	Arabidopsis Rhizosphere	MRSRFEFEAPTLFRKAILTLKAPHHWRSSLRPYVFDKQSGVRFQVAKDEEAMLKPLTARLRNGSTPPEVAIAFDQAADAMLNRRRGYCFEWNRLSAQTAADWSDRFGEKR
Ga0132256_1026077381	3300015372	Arabidopsis Rhizosphere	MRSRFEYEAPGFLQKTSLTIKAPHRWRSHARAWIFDKKSGVRFQLAKDEEIALQPLIRRMSNGSTAIPTAVAFDHAASALLDRRLGYSCEWERLSRRTPSDWNSCLDVGLRRLRW*
Ga0132255_1021369592	3300015374	Arabidopsis Rhizosphere	MRSRFEYQAPGLLKTTFLIIKAPHRWPTSTRPWLFDKRSGVRFQLAKDEQIALQPLTARLRNGGTSPEVAIAFDQAADAVLNRRRGYCFEWTRLSKHTAADWSDRLSEKNAR*
Ga0187812_10302832	3300017821	Freshwater Sediment	MRTRFEYEAPGLLKKAALTIKAPHRWRSQVRPWVFDKKNGVRFQLAKDEQAALQPLTSRMRNGSTPLEVAVAFDHLADAIMDRRRGYCFQWDRFAKRTPAEWDSWLSGSLRRLRW
Ga0187812_10904322	3300017821	Freshwater Sediment	MTWATLSILPSLLGKASSSVHFTQVHGGLVMRSRFEYEAPGLLKKTVLTIKAPHRWRSSVRPWVFDKQSGVRFQLAKDEQVVLQPLTSRLRNGSTPPEVTIAFDHVAHAMLERRRGYCFEWNRLAKQTAAEWNDRLSERNAR
Ga0187812_11068001	3300017821	Freshwater Sediment	MRSRFKYEAPGLLKKATLAIKAPHRWRSEIRPWVFDKKSGIRFQLARDEQAALEPLTSRIRNGSTPVEVGIAFDQVADAIMDRRRGYCFEWNRLAQRTPAEWDSWLSCSLRRLRW
Ga0187802_101984451	3300017822	Freshwater Sediment	MRSRFEYEAPGLLKKTVLTIKAPHRWRSSVRPWVFDKQSGVRFQLAKDEQVVLQPLTSRLRNGSTPPEVTIAFDLAADAILSRRRGYCFEWNRLAKQTAAEWTDHLGEKSAR
Ga0187818_102273691	3300017823	Freshwater Sediment	MRSRFEYEAPSFFRKATLTLKAPHRWRSNVRPWVFDKKSGVRFQLAEDEEAALRPVTRRMKNGSTPLPVAVAFDQVASAIMNRRCGYGFEWERLARRSPAEWDSWLDDGLRRLRW
Ga0187818_103414851	3300017823	Freshwater Sediment	NGSLARGLVMRSRFEYEAPSLLQKATLTLKAPHRWRSSVRPWVFDKKSGVRFQLAEDEETALRPVTRRIRNGGTALPVVVAFDQVAKAMMDRRRGYCFEWNRLASRTPAEWDSWLDDGLRRLRW
Ga0187806_10593893	3300017928	Freshwater Sediment	MRTRFEYEAPGMLKKAALTIKAPHRWRSQVRPWVFDKKNGVRFQLAKDEQAALQPLTSRMRNGSTPLEVAVAFDHLADAIMDRRRGYCFQWDRFAKRTPAEWDSWLSGSLRRLRW
Ga0187814_101234152	3300017932	Freshwater Sediment	MTWATLSILPSLLGKASSSVHFTQVHGGLVMRSRFEYEAPGLLKKTVLTIKAPHRWRSSVRPWVFDKQSGVRFQLAKDEQVVLQPLTSRLRNGRTPPEVTIAFDHVAHAMLERRRGYCFEWNRLAKQTAAEWNDRLSERNAR
Ga0187814_102915342	3300017932	Freshwater Sediment	ALVMRTRFEYEAPGLLKKAALTIKAPHRWRSQVRPWVFDKKNGVRFQLAKDEQAALQPLTSRMRNGSTPLEVAVAFDHLADAIMDRRRGYCFQWDRFAKRTPAEWDSWLSGSLRRLRW
Ga0187801_102964112	3300017933	Freshwater Sediment	MRSRFEYEAPSFFQKATLTLKAPHRWRSKVRPWVFDKKSGVRFQLAEDEETALRPVTRRIRNGGTALPVVVAFDQVAKAMMDRRRGYCFEWNRLASRTPAEWDSWLDDGLRRLRW
Ga0187801_103816712	3300017933	Freshwater Sediment	MRSRFEYQAPSLLDKAALAVKAPHRWRSEVRPWVFDKKSGVRFQLADDEQAALQPLTLRMKNGSTPFPVAIAFDHAANAIMDRRRGYCFEWDRLARQTPADWDTWLSGALRRLRW
Ga0187803_102127531	3300017934	Freshwater Sediment	MRSRFEYEAPSFLQKATLTLKAPHRWRSNVRPWVFDKKSGVRFQLAEDEETALRPVTRRIRNGGTALPVVVAFDQVAKAMMDRRRGYCFEWNRLASRTPAEWDSWLDDGLRRLRW
Ga0187809_100236742	3300017937	Freshwater Sediment	MSKRGRTNGSLARGLVMRSRFEYEAPSFFQKATLTLKAPHRWRSKVRPWVFDKKSGVRFQLAEDEETALRPVTRRIRNGGTALPVVVAFDQVAKAMMDRRRGYCFEWNRLASRTPAEWDSWLDDGLRRLRW
Ga0187809_101300732	3300017937	Freshwater Sediment	FEYEAPGLLKKAALTIKAPHRWRSQVRPWVFDKKNGVRFQLAKDEQAALQPLTSRMRNGSTPLEVAVAFDHLADAIMDRRRGYCFQWDRFAKRTPAEWDSWLSGSLRRLRW
Ga0187809_104079122	3300017937	Freshwater Sediment	LKKTLLTIKAPHRWRSSVQPWVFDKRSGVRFQLAKDEQVAMRPLTSRLRNGSTPPEVTIAFDLAADAILSRRRGYCFEWNRLAKQTAAEWTDHLGEKSAR
Ga0187819_100449672	3300017943	Freshwater Sediment	MSKRGRTNGSLARGLVMRSRFEYEAPSFLQKATLTLKAPHRWRSNVRPWVFDKKSGVRFQLAEDEETALRPVTRRIRNGGTALPVVVAFDQVAKAMMDRRRGYCFEWNRLASRTPAEWDSWLDDGLRRLRW
Ga0187819_100594452	3300017943	Freshwater Sediment	MRSRFEYEAPGLLKKTVLTIKAPHRWRSSVRPWVFDKQSGVRFQLAKDEQVVLQPLTSRLRNGSTPPEVTIAFDHVAHAMLERRRGYCFEWNRLAKQTAAEWNDRLSERNAR
Ga0187819_101062172	3300017943	Freshwater Sediment	MRSRFEYEAPSLLQKATLTLKAPHRWRSSVRPWVFDKKSGVRFQLAEDEETALRPVTRRMRNGSTPLPVTVAFDQVASAIMNRRCGYGFEWERLARRTSAEWESWLDDGLRRLRW
Ga0187819_102597572	3300017943	Freshwater Sediment	MRSGFKYEAPGLLKKATLAIKAPHRWRSEIRPWVFDKKSGIRFQLARDEQAALEPLTSRIRNGSTPVEVGIAFDQVADAIMDRRRGYCFEWNRLARRTPAEWDSWLSGSLRRLRW
Ga0187819_106402901	3300017943	Freshwater Sediment	ICRRCSIYTRSGLYRCLGAREVVMRSRFEYQAPSLLDKAALAVKAPHRWRSGVRPWVFDKKSGVRFQLTSEEQAALQPLTLRMRNGSTPFPVAIAFDHAANAIMDRRRGYCFEWDRLARQTPADWDTWLSGALRRLRW
Ga0187817_100077801	3300017955	Freshwater Sediment	MRSRFEYEAPSLLQKATLTLKAPHRWRSSVRPWVFDKKSGVRFQLAEDEETALRPVTRRMRNGSTPLPVTVAFDQVASAIMNRRCGYGFERERLARRTSAEWESWLDEGLRRVRW
Ga0187817_100418452	3300017955	Freshwater Sediment	MRSRFEYEAPSFFQKATLTLKAPHRWRSNVRPWVFDKKSGVRFQLAEDEETALRPVTRRIRNGGTALPVVVAFDQVAKAMMDRRRGYCFEWNRLASRTPAEWDSWLDDGLRRLRW
Ga0187779_113461291	3300017959	Tropical Peatland	MRSRFEYEAPSFLQKAALTLKAPHRWRSSVRPWVFDKKSGVRFQLAEDEETALHPVTRRMKNGSIPLPVTVAFDQVASAIMNRRCGYGFEWEKLARRTPAEWESWLDDDPRRLRW
Ga0187778_111776481	3300017961	Tropical Peatland	TLTLKAPHRWRSSVRPWVFDKRSGVRFQLAEDEETALRPVIRRMKNGSTPLPVTVAFDQVASAIMNRRCGYGFEWEKLARRTPAEWDSWLDDALRRLRW
Ga0187776_110527332	3300017966	Tropical Peatland	FKYEVPSFRQKATLTLRAPHRWRSSVRPWVFDKKSGVRFQLAEDEETALRPLTRRMKNGSTPLPVTVAFDQVASAILNRRCGYGFEWDRLAKRTPAEWNSWLDEGLRRLRW
Ga0187780_101278172	3300017973	Tropical Peatland	MRSRFEYEAPSFLQKATLTLKAPHRWRSSVRPWVFDKKSGVRFQLAEDEETALHPVTRRMKNGSIPLPVTVAFDQVASAIMNRRCGYCFEWNRLARRTPAEWESWLDDGLRRLRW
Ga0187780_111274881	3300017973	Tropical Peatland	MRSRFEYEAPSFLQKTALTLKAPHRWRSSVRPWVFDKRSGVRLQLAEDEETALRPVTRRMRNGSTPLPVTVAFDQVASAIMNRRCGYGFEWNRFARRTPAEWESWLDEGLRRLRW
Ga0187777_101070003	3300017974	Tropical Peatland	MRSRFEYEAPGLLKKIILTVQAPHRCRSSMRAWVFDKHSGVRFQLSKDERAVLQPLTSRLRNGNTPPKVAVAFDHAAEAILDRRRGYCFEWNRLTKQTSAEWNDWLGQTNPH
Ga0187777_101718103	3300017974	Tropical Peatland	MCSRYEYEAPSLSRKVALTLKFPHRWRSEIQPWIFDKKNGTRFRLTRDEQAALKPLTTRLRNGDTRFDVAVAFDEAAAALMGRRRGYCFEWNRLAMRTPADWDAWLSGSLRRLRW
Ga0187777_102901523	3300017974	Tropical Peatland	MRARFEYEAPSFLQKATLTLKAPHRWRSSVRPWVFDKRSGVRFQLAEDEETALRPVIRRMKNGSTPLPVTVAFDQVAEAMMERRRGYGFEWNRLARRTPIEWESWLDDGLRRLRW
Ga0187777_112101101	3300017974	Tropical Peatland	MRSRFEYEAPSFLQKAALTLKAPHRWRSSVRPWVFDKKSGVRFQLAEDEETALHPVTRRMKNGDAALPVVVAFDQVGNAMMERRRGYCFEWNRLA
Ga0187816_101321621	3300017995	Freshwater Sediment	TQVHGGLVMRSRFEYEAPGLLKKTVLTIKAPHRWRSSVRPWVFDKQSGVRFQLAKDEQVVLQPLTSRLRNGSTPPEVTIAFDHVAHAMLERRRGYCFEWNRLAKQTAAEWNDRLSERNAR
Ga0187815_101034991	3300018001	Freshwater Sediment	RLPQTRILMSKRGRTNGSLARGLVMRSRFEYEAPSFFQKATLTLKAPHRWRSKVRPWVFDKKSGVRFQLAEDEETALRPVTRRIRNGGTALPVVVAFDQVAKAMMDRRRGYCFEWNRLASRTPAEWDSWLDDGLRRLRW
Ga0187805_105741951	3300018007	Freshwater Sediment	YTGALVMRTRFEYEAPGLLKKAALTIKAPHRWRSQVRPWVFDKKNGVRFQLAKDEQAALQPLTSRMRNGSTPLEVAVAFDHLADAIMDRRRGYCFQWDRFAKRTPAEWDSWLSGSLRRLR
Ga0187766_108496361	3300018058	Tropical Peatland	ATLTLKAPHRWRSSVRPWVFDKKSGARFQLAEDEETALHPVTRRMKNGSQPLPVTVAFDQVASAIMNRRCGYCFEWNRFARRTPAEWESWLDDGLRRLRW
Ga0210408_112378401	3300021178	Soil	PNFANVLIYIQPAVYILSGVHEAVMRSRFEYEAPGLLKKAALTLRAPHKWRSRVRPWVFDKQSGVRFQLDADEHAALKPLTSRIKNGSTSLEVGVAFDQVADAIMARRRGYCFEWNHLADRTSAEWENWLSGSLRRLRW
Ga0207692_109459132	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	TLKAPHKWRSRVRPWVFDKKSGVRFQLDADEHAVLKPLTSRIKNGSTSLEVAVAFDQVADAIMGRRRGYCFEWNRLADRTSAEWENWLSGSLRRLRW
Ga0207699_111598831	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MCSFRFSLRVYILSGVHEAVMRSRFEYEAPGLLKKAALTLKAPHKWRSRVRPWVFDKKSGVRFQLDADEHAVLKPLTSRIKNGSTSLEVAVAFDQVADAIMGRRRGYCFEWNRLADRTSAEWENWLSGSLRRLRW
Ga0207862_12435142	3300027703	Tropical Forest Soil	MRSRFEYEAPSFLQKATLTLKAPHRWRSSVRPWVFDKKSGVRFQLAEDEETALHPVIRRMKNGSIPLPVTVAFDQVASAIMNRRCGYCFEWNRLARRTPAEWESWLDDG
Ga0209068_101435201	3300027894	Watersheds	MRSRFEYEAPSFLQKATLTLKAPHRWRSSVRPWVFDRKSGVRFQLAEDEETALRPVTRRMKNGSTPLPVAVAFDQVASAIMNRRCGYGFEWDRLARRKPTEWDSWLDDGLRRLRW
Ga0209068_105988781	3300027894	Watersheds	MRSRFEYEAPGLLKKAALTLKAPHKWRSRVRPWVFDKKSSARFQLAEDEHSALRPLTLRMRNGSPSLPAAVAFDEAAAAIMDRRRGYCFEWDHLAKRTPAEW
Ga0209067_100635772	3300027898	Watersheds	MRSRFEYEAPGLLKKTVITIKAPHRWRSGVRPWVFDKQSGVRFQLAKDEQAVLQPLTSRLRNGSTPPEVAIAFDHLAHAMLERRRGYCFEWNRLAKQTAAEWNDRLSERNAR
Ga0209067_101275562	3300027898	Watersheds	MRSQFEFEAPSLLKKVALTIKAPHQWRSRVRPWVFDKKSGVRFQLAQDEHATLKPLTCHMQNGSARLEVAVAFDQAAGAIMDRRRGYCFEWNRLAKRTPAEWDSWLSGGLRRLRW
Ga0209067_103421672	3300027898	Watersheds	MRCQFEYEAPSLRRKVALTLKAPHKWRSRVRPWVFDKKSSARFQLAEDEHSALRPLTLRMRNGSPSLPTAVAFDEAAAAIMDRRRGYCFEWDHLAKRTPAEWESWLNGGLRRLR
Ga0209067_105986832	3300027898	Watersheds	MRSRFEYEAPSFLQKATLTLMAPHRWRSRVRPWVFDKESGVRFQLARDEETTLQPLTRRITNGTTHVPIAVAFDHAASALLDRRRGYCFEWQRLARRTPAEWDA
Ga0209698_106057482	3300027911	Watersheds	MRSRFEYEAPSFLQKATLTLKAPHRWRSSVRPWVFDKKSGVRFQLAEDEETALRPVTRRMKNGSTPLPVAVAFDQVASAIMNRRCGYGFEWDRLARRKPTEWDSWLD
Ga0209069_101341301	3300027915	Watersheds	MRSRFEYEAPNLLKKAALTIKAPHRWRSRLRPWVFDKQSGVRFQLAADEDAALQPLTCRMKNGSTPREVAAAFDHVAAAIMDRRRGYCFEWNRLAKQSTADWDDRLGEENGR
Ga0335070_119272241	3300032829	Soil	MMVMRSRFEYEAPSFVQKTALTLKAPHRWRSSVRPWVFDKKSGVRFQLAEDEETALRPVTRRMKNGSTSLPVTVAFDQVTSAILNRRCGYGFEWEKLARRTPAEWESWLDDALRRLRW
Ga0335081_110616431	3300032892	Soil	GLVMRSRFEYEAPSFLQKATLTLKAPHRWRSSVRPWVFDKKSGVRFQLAEDEETTLRPVTRRMKNGSTPLPVSVAFDQVATAILNRRCGYGFEWEKLARRTPAEWDSWLDDGLRRLRW
Ga0335081_121950522	3300032892	Soil	LATGVVMRSRFEYEAPSFVQKTALTLKAPHRWRSSVRPWVFDKRSGVRFQLAEDEETALRPVTRRMRNGSTPLPVTVAFDQVASAIMNRRCGYGFEWEKLARRTPAEWESWLDEGLRRLR
Ga0335069_120060492	3300032893	Soil	TALALKAPHRWRTNVRPWVFDKKSGVRFQLAEDEETALRPVTRRMRNGSTPLPVTVAFDQVASAILNRRCGYDFEWEKLARRTPAEWDSWLDDGLRRLRW
Ga0335069_126906422	3300032893	Soil	PNFLQKANLTLKAPHRWRSSVRPWVFDKKSGVRFQLAEDEETALRPVTRRMRNGSMPLPVTVAFDQVASAILNRRCGYSFEWEKLARRTPAEWESWLDDAPRRLRW
Ga0335077_112855752	3300033158	Soil	MRSRFEYEAPSFLQKTALTLKAPHRWRSSVRPWVFDKKSGVRFQLAEDEETALRPVTRRMRNGSTPLPVTVAFDQVASAILNRRCGYDFEWEKLARRTPAEWDSWLDDGLRRLRW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F099895

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences