Metagenome / Metatranscriptome Family F099896

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099896
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	37 residues
Representative Sequence	MEYAVTAGFLLAVVAGSFAAVILGGYGIAHLIASAL
Number of Associated Samples	69
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.50 %
% of genes near scaffold ends (potentially truncated)	10.68 %
% of genes from short scaffolds (< 2000 bps)	93.20 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (66.990 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.184 % of family members)
Environment Ontology (ENVO)	Unclassified (36.893 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (75.728 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.12% β-sheet: 0.00% Coil/Unstructured: 46.88%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF09933	DUF2165	2.91
PF13673	Acetyltransf_10	2.91
PF06309	Torsin	1.94
PF03401	TctC	0.97
PF13408	Zn_ribbon_recom	0.97
PF00582	Usp	0.97
PF01436	NHL	0.97
PF00816	Histone_HNS	0.97
PF16576	HlyD_D23	0.97
PF13586	DDE_Tnp_1_2	0.97
PF13180	PDZ_2	0.97
PF13565	HTH_32	0.97
PF00589	Phage_integrase	0.97
PF14850	Pro_dh-DNA_bdg	0.97
PF07995	GSDH	0.97
PF06146	PsiE	0.97
PF01381	HTH_3	0.97
PF02796	HTH_7	0.97
PF05559	DUF763	0.97
PF13358	DDE_3	0.97
PF12844	HTH_19	0.97
PF03636	Glyco_hydro_65N	0.97
PF01068	DNA_ligase_A_M	0.97
PF01370	Epimerase	0.97
PF14087	DUF4267	0.97
PF03466	LysR_substrate	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	1.94
COG1415	Uncharacterized conserved protein, DUF763 domain	Function unknown [S]	0.97
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.97
COG1554	Phosphatase/phosphodiesterase/kojibiose phosphorylase YcjT/PafA/Npp1, AlkP superfamily	Carbohydrate transport and metabolism [G]	0.97
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.97
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.97
COG2916	DNA-binding protein H-NS	Transcription [K]	0.97
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.97
COG3223	Phosphate starvation-inducible membrane PsiE (function unknown)	General function prediction only [R]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.99 %
All Organisms	root	All Organisms	33.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.99 %
cellular organisms	root	All Organisms → cellular organisms	33.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.99 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.99 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.99 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.68 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.99 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.85 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.97 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.99 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.88 %
Brevundimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas	0.97 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.99 %
Bradyrhizobium australiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium australiense	0.97 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.97 %
unclassified Brevundimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas	0.97 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.99 %
Brevundimonas sp. Root1279	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp. Root1279	0.97 %
Bradyrhizobium sp. BRP22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. BRP22	0.97 %
Bradyrhizobium australiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium australiense	0.97 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918007\|ConsensusfromContig140124	Not Available	1109	Open in IMG/M
2170459010\|GIO7OMY02JBU2G	Not Available	504	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_103767211	Not Available	511	Open in IMG/M
3300002245\|JGIcombinedJ26739_100343336	All Organisms → cellular organisms → Bacteria	1374	Open in IMG/M
3300004082\|Ga0062384_100351737	Not Available	933	Open in IMG/M
3300004635\|Ga0062388_102592427	Not Available	533	Open in IMG/M
3300005591\|Ga0070761_10107583	All Organisms → cellular organisms → Bacteria → Proteobacteria	1612	Open in IMG/M
3300005591\|Ga0070761_11006291	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005764\|Ga0066903_102875959	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300005764\|Ga0066903_104200533	Not Available	771	Open in IMG/M
3300005764\|Ga0066903_106813188	Not Available	594	Open in IMG/M
3300005921\|Ga0070766_10469244	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300005921\|Ga0070766_11116386	Not Available	544	Open in IMG/M
3300005995\|Ga0066790_10155454	Not Available	979	Open in IMG/M
3300005995\|Ga0066790_10270425	Not Available	725	Open in IMG/M
3300006028\|Ga0070717_10924853	Not Available	794	Open in IMG/M
3300006163\|Ga0070715_11053899	Not Available	509	Open in IMG/M
3300006175\|Ga0070712_100823861	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300006175\|Ga0070712_101699518	Not Available	552	Open in IMG/M
3300006176\|Ga0070765_101439201	Not Available	649	Open in IMG/M
3300009101\|Ga0105247_11187066	Not Available	607	Open in IMG/M
3300010159\|Ga0099796_10514458	Not Available	537	Open in IMG/M
3300010359\|Ga0126376_11731651	Not Available	661	Open in IMG/M
3300010366\|Ga0126379_12020452	Not Available	679	Open in IMG/M
3300010379\|Ga0136449_100195049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3865	Open in IMG/M
3300010379\|Ga0136449_100250612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	3290	Open in IMG/M
3300010379\|Ga0136449_104680312	Not Available	500	Open in IMG/M
3300012212\|Ga0150985_114634942	Not Available	838	Open in IMG/M
3300012361\|Ga0137360_11524592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	573	Open in IMG/M
3300012971\|Ga0126369_12130269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	648	Open in IMG/M
3300012971\|Ga0126369_13158985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	539	Open in IMG/M
3300014501\|Ga0182024_10738880	All Organisms → cellular organisms → Bacteria → Proteobacteria	1209	Open in IMG/M
3300014501\|Ga0182024_10952377	Not Available	1029	Open in IMG/M
3300016270\|Ga0182036_11599567	Not Available	549	Open in IMG/M
3300016294\|Ga0182041_10765832	Not Available	860	Open in IMG/M
3300016319\|Ga0182033_10882241	Not Available	791	Open in IMG/M
3300016319\|Ga0182033_11398625	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300016357\|Ga0182032_11794428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	536	Open in IMG/M
3300016371\|Ga0182034_11739082	Not Available	549	Open in IMG/M
3300016387\|Ga0182040_11076904	Not Available	673	Open in IMG/M
3300016404\|Ga0182037_11728247	Not Available	558	Open in IMG/M
3300016422\|Ga0182039_11258144	Not Available	670	Open in IMG/M
3300016445\|Ga0182038_10967185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp. Root1279	753	Open in IMG/M
3300016445\|Ga0182038_11748842	Not Available	561	Open in IMG/M
3300017946\|Ga0187879_10520106	Not Available	660	Open in IMG/M
3300018085\|Ga0187772_10252545	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300020579\|Ga0210407_10844270	Not Available	705	Open in IMG/M
3300021432\|Ga0210384_10719901	Not Available	893	Open in IMG/M
3300021478\|Ga0210402_10042508	All Organisms → cellular organisms → Bacteria	3953	Open in IMG/M
3300021478\|Ga0210402_10528277	Not Available	1095	Open in IMG/M
3300021478\|Ga0210402_10707630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	930	Open in IMG/M
3300021478\|Ga0210402_10800825	Not Available	868	Open in IMG/M
3300021478\|Ga0210402_10830598	Not Available	850	Open in IMG/M
3300021478\|Ga0210402_11271604	Not Available	663	Open in IMG/M
3300021478\|Ga0210402_11428558	Not Available	619	Open in IMG/M
3300021478\|Ga0210402_11570252	Not Available	585	Open in IMG/M
3300021478\|Ga0210402_11601345	Not Available	578	Open in IMG/M
3300022724\|Ga0242665_10267126	Not Available	588	Open in IMG/M
3300022726\|Ga0242654_10258830	Not Available	626	Open in IMG/M
3300025915\|Ga0207693_10163708	Not Available	1750	Open in IMG/M
3300025915\|Ga0207693_10571581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	881	Open in IMG/M
3300027701\|Ga0209447_10209735	Not Available	532	Open in IMG/M
3300027767\|Ga0209655_10184611	Not Available	687	Open in IMG/M
3300027889\|Ga0209380_10084191	All Organisms → cellular organisms → Bacteria	1827	Open in IMG/M
3300027895\|Ga0209624_10343879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	994	Open in IMG/M
3300027903\|Ga0209488_10442361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	958	Open in IMG/M
3300027908\|Ga0209006_10018538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6312	Open in IMG/M
3300027908\|Ga0209006_10029378	Not Available	4983	Open in IMG/M
3300028780\|Ga0302225_10422115	Not Available	626	Open in IMG/M
3300029990\|Ga0311336_11333651	Not Available	629	Open in IMG/M
3300031232\|Ga0302323_101468912	Not Available	767	Open in IMG/M
3300031543\|Ga0318516_10202404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1147	Open in IMG/M
3300031573\|Ga0310915_10940093	Not Available	605	Open in IMG/M
3300031708\|Ga0310686_106069319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. BRP22	692	Open in IMG/M
3300031744\|Ga0306918_10493162	Not Available	959	Open in IMG/M
3300031748\|Ga0318492_10179870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1076	Open in IMG/M
3300031768\|Ga0318509_10253458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	983	Open in IMG/M
3300031823\|Ga0307478_11427285	Not Available	574	Open in IMG/M
3300031879\|Ga0306919_10246519	Not Available	1343	Open in IMG/M
3300031879\|Ga0306919_10850981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	700	Open in IMG/M
3300031890\|Ga0306925_10872459	Not Available	928	Open in IMG/M
3300031912\|Ga0306921_10169435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2558	Open in IMG/M
3300031912\|Ga0306921_10657020	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300031912\|Ga0306921_11700835	Not Available	682	Open in IMG/M
3300031912\|Ga0306921_12437531	Not Available	545	Open in IMG/M
3300031942\|Ga0310916_10829482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium australiense	778	Open in IMG/M
3300031947\|Ga0310909_10644692	Not Available	883	Open in IMG/M
3300031947\|Ga0310909_11436039	Not Available	551	Open in IMG/M
3300031954\|Ga0306926_10592342	Not Available	1355	Open in IMG/M
3300031954\|Ga0306926_10645374	Not Available	1289	Open in IMG/M
3300031954\|Ga0306926_11735043	Not Available	711	Open in IMG/M
3300032042\|Ga0318545_10366990	Not Available	519	Open in IMG/M
3300032066\|Ga0318514_10513607	Not Available	638	Open in IMG/M
3300032160\|Ga0311301_10172301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3817	Open in IMG/M
3300032261\|Ga0306920_100937057	All Organisms → cellular organisms → Bacteria → Proteobacteria	1264	Open in IMG/M
3300032261\|Ga0306920_101669878	Not Available	904	Open in IMG/M
3300032261\|Ga0306920_102390948	Not Available	730	Open in IMG/M
3300032261\|Ga0306920_102576186	Not Available	698	Open in IMG/M
3300032261\|Ga0306920_103371357	Not Available	594	Open in IMG/M
3300032261\|Ga0306920_104458054	Not Available	501	Open in IMG/M
3300032515\|Ga0348332_12139240	Not Available	702	Open in IMG/M
3300032892\|Ga0335081_11875491	Not Available	645	Open in IMG/M
3300033289\|Ga0310914_10915924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	776	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.06%
Host-Associated	Host-Associated	1.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.20%
Aquatic	Environmental → Aquatic	4.85%
Plants	Host-Associated → Plants	1.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.32%
Freshwater	Environmental → Aquatic → Freshwater	4.85%
Peat	Environmental → Terrestrial → Peat	2.91%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.05%
Loam	Environmental → Terrestrial → Soil → Loam	18.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.91%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	50.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.97%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.33%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.83%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.94%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.94%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.97%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.97%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.97%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.97%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A_all_C_00100470	2140918007	Soil	MEYAITAAFLLAVVAGSFAAVILGGYGIVHLIASAL
F62_08456520	2170459010	Grass Soil	MEYTITAAFLLAVVAGSIAAVILGGYGIAHLIASAL
INPhiseqgaiiFebDRAFT_1037672112	3300000364	Soil	MQYVVTAAFLLAIVATSFAAVILGGYGIARLIALAL*
JGIcombinedJ26739_1003433363	3300002245	Forest Soil	MEYVITAAFLLAVVAGSFAAVILGGYGFAHLIASAL*
Ga0062384_1003517372	3300004082	Bog Forest Soil	LSERIRLMEYTVTAAFLLAVVAGSFAAVILGGYGIAQLIASAL*
Ga0062388_1025924272	3300004635	Bog Forest Soil	VSAGGIFLIERIRPMEYSVTAAFLLAVVAGSFAAVIIGGYSIAQLIASAL*
Ga0070761_101075831	3300005591	Soil	MEYAITAAFLLAVVAGSFAAVILGGYGIAQLIVSAL*
Ga0070761_110062911	3300005591	Soil	MEYAVTAAFLLSVVAGSFAAVILGGYGIAQLIASAL*
Ga0066903_1028759593	3300005764	Tropical Forest Soil	MQYAITAGFLLAVVAGGFAAVILAGYGIAHLIASGM*
Ga0066903_1042005331	3300005764	Tropical Forest Soil	MQYDVTAAFLLAIVAGSFAAVILGGYEIALLIALAL*
Ga0066903_1068131882	3300005764	Tropical Forest Soil	MCVQGLASPMEYTVITAFLLAGVAGSFAAVILGGYEIVCLIAFVL*
Ga0070766_104692443	3300005921	Soil	MQYAITSAFLLAVVAGSFAAVILGVYGVAQLIASAL*
Ga0070766_111163862	3300005921	Soil	MEYAVTAGFILAVVAGSFAVVILGGYEIAHLIAFAL*
Ga0066790_101554541	3300005995	Soil	MEYAITTAFLLAVVAGSFAAVILGGYGVAQLIASAL*
Ga0066790_102704252	3300005995	Soil	MEYAITAAFLLAVVAGSFAAIILGGYGVAQLIVSAL*
Ga0070717_109248532	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPSPLTAAFLLAIVAGSFAAVILGGYEIARLIALAL*
Ga0070715_110538993	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MEYAITAAFLLAVVAGSFAAVILGGYGVAQLIAFAL*
Ga0070712_1008238612	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MQYAVTAAFLLAIVAGSFAAVILSGYGIARLVALAM*
Ga0070712_1016995181	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MQYVVTAALLLAVVAGSFAAVILGGYGIARLIALAL*
Ga0070765_1014392011	3300006176	Soil	MEYVATAAFLLSVVAGSFAAVIFGGYGIAQLIASAL*
Ga0105247_111870663	3300009101	Switchgrass Rhizosphere	VEYTVTAAFLLAVVAGSFTVVIFGGYELVQLIASAL*
Ga0099796_105144581	3300010159	Vadose Zone Soil	PAFPFLKVFPMQYAITVGFLLAVVAGSFAAVILGGYGIARLIAFAL*
Ga0126376_117316511	3300010359	Tropical Forest Soil	MTESFMEYTITAAFLLAVVAGSFAAVILGGYGIAHLIASVL*
Ga0126379_120204522	3300010366	Tropical Forest Soil	MEYTVIAAFLLAVVAGSFAAVILGGYEIARLIAFVL*
Ga0136449_1001950494	3300010379	Peatlands Soil	MEYAVTAGFLLAVVAGSFAAVILGGYGIAHLIASAL*
Ga0136449_1002506123	3300010379	Peatlands Soil	MEYAITAAFLLAVVAGSFAAVILGGYGVAQLIASAL*
Ga0136449_1046803122	3300010379	Peatlands Soil	MEYAITAAFLLAVVAGSFAEVILGGYGVAQLIASAL*
Ga0150985_1146349421	3300012212	Avena Fatua Rhizosphere	MEYTVTAGFLLAVVAGSFAAVILTGYGIARLVALAM*
Ga0137360_115245922	3300012361	Vadose Zone Soil	MEYAVTAGFLLAVVAGSFAAVILGSYGIAHLIALAL*
Ga0126369_121302692	3300012971	Tropical Forest Soil	PMEYTVITAFLLAGVAGSFAAVILGGYEIVCLIAFVL*
Ga0126369_131589852	3300012971	Tropical Forest Soil	MQYAVTAAFLLAVVAGSFAALILGGYEIARLIAFAL*
Ga0182024_107388801	3300014501	Permafrost	MEYAITAAFLLAVVAGSFAAVILAGYGVAQLIVSAL*
Ga0182024_109523772	3300014501	Permafrost	MEYAITAAFLLAVVAGSFAAIVLGGYGVAQLIASAL
Ga0182036_115995671	3300016270	Soil	MCGAGLASPMEYTVIAAFLLAVVAGSFAAVILGGYEIVRLIAFVL
Ga0182041_107658322	3300016294	Soil	MQYAVTAAFLLAIVAGSFAVVILGGYEIARLIALGL
Ga0182033_108822411	3300016319	Soil	MQYALTAAFLLAVVAGSFAAVILGGYEIARLIALAL
Ga0182033_113986251	3300016319	Soil	MEYAVTAAFLLAVVTGSFVAVILGGYKIVHLIGLAL
Ga0182032_117944282	3300016357	Soil	MEYAVTAAFLLAVVAGSFAAVILGGYEIAHLIALAL
Ga0182034_117390822	3300016371	Soil	MEYTVIAAFLLAVVAGSFAAVILGGYEIVRLIAFVLYRRPTRLQT
Ga0182040_110769041	3300016387	Soil	MQYFITAAFLLAVVAGSFAAVVLGGYGIARLIAFAL
Ga0182037_117282472	3300016404	Soil	MQYALTAAFLLAVVAGSFAAVILGGYGIVHLIASAL
Ga0182039_112581441	3300016422	Soil	MQYVITAAFLLAVVAGSFAAVVLGGYGIARLIAFAL
Ga0182038_109671851	3300016445	Soil	MEYAVTAGFLLAVVAGSFAAVILGGYGIVHLIASAL
Ga0182038_117488421	3300016445	Soil	MQYVITAAFLLAVVAGSFAAVILGGYGIARLIAFAL
Ga0187879_105201062	3300017946	Peatland	MEYAITAAFLLALVAGSFAAVILGGYGVAQLIVSAL
Ga0187772_102525451	3300018085	Tropical Peatland	VEYTVTAAFLLAVVAGGFAAVILGGYGLVQLIAYAF
Ga0210407_108442701	3300020579	Soil	MCGAGLASPMEYAVIAAFLLAVVAGSFAAVILGGYEMARLIAFVL
Ga0210384_107199012	3300021432	Soil	MQYAITAGFLLAVVAGSFAAVILGGYGIACLIAFAL
Ga0210402_100425084	3300021478	Soil	MEYTITAAFLLAVVAGGFAAVILGGYGIAHLIASAL
Ga0210402_105282771	3300021478	Soil	MEYAVTAAFLLTVVAGSFAAVIFGGYEIAHLIALAL
Ga0210402_107076302	3300021478	Soil	MEYAVTPGFLLAVVAGSFATVILVGYGIAHLIAFAL
Ga0210402_108008251	3300021478	Soil	MEYAVTAAFLLSVVAGSFAAVILGGYGIAQLIASAL
Ga0210402_108305982	3300021478	Soil	MQYAITAGFLLAVVAGSFAAVILGGFGIARLIALAL
Ga0210402_112716042	3300021478	Soil	MEYTITAAFLLSVVAGSFAAVILGGYGIVHLIASVL
Ga0210402_114285582	3300021478	Soil	MEYAVTAGFLLAVVAGSFATVILVGYEIAHLIAFAL
Ga0210402_115702521	3300021478	Soil	MQYAITAAFLLAVVAGSFAAVILGGYGIARLIAFAL
Ga0210402_116013452	3300021478	Soil	MEYTITAAFLLAVVAGIAAVILGGYGIAHLIVSAL
Ga0242665_102671261	3300022724	Soil	MQYAITAAFLLAVVAGSFAAVILGGYGIVHLIASAL
Ga0242654_102588302	3300022726	Soil	MEYAVTAGFLLAVVAGSFAAVIFGGYEIAHLVAFVL
Ga0207693_101637081	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MQYVVTAAFLLAVVADSFAAVILGGYGIACLIAFAL
Ga0207693_105715811	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MQYVVTAALLLAVVAGSFAAVILGGYGIARLIALAL
Ga0209447_102097352	3300027701	Bog Forest Soil	MEYTITAAFLLAVVAGSFAVVIIGGYGIAQMIASAL
Ga0209655_101846111	3300027767	Bog Forest Soil	MEYTVTAAFLLAVVAGSFAVVIIGGYGIAQMIASAL
Ga0209380_100841912	3300027889	Soil	MEYAVTAGFILAVVAGSFAVVILGGYEIAHLIAFAL
Ga0209624_103438792	3300027895	Forest Soil	MQYAITSAFLLAVVAGSFAAVILGVYGVAQLIASAL
Ga0209488_104423611	3300027903	Vadose Zone Soil	MEYAITAAFLLAVVAGSFAAVIIGGYGVAQLIASAL
Ga0209006_100185383	3300027908	Forest Soil	MEYTITAAFLLAVVTGSFATVILGGYGLAQLIASAL
Ga0209006_100293781	3300027908	Forest Soil	MEYVATAAFLLSVVAGSFAAVIFGGYGIAQLIASAL
Ga0302225_104221151	3300028780	Palsa	MEYAITTAFLLAVVAGSFAAVILSGYGVARLIASAL
Ga0311336_113336512	3300029990	Fen	MEYAVTSGFLLAVVAGSFAAVIFAGYGIVHLLASA
Ga0302323_1014689121	3300031232	Fen	MEYAVTSGFLLAVVAGSFAAVIFAGYGIVHLLASAL
Ga0318516_102024042	3300031543	Soil	MEYTVIATFLLAVVTGSFAAVILGGYEIARLIAFVL
Ga0310915_109400931	3300031573	Soil	MCGAGLASPMEYTVIAAFLLAVVAGSFAAVILGGYEMA
Ga0310686_1060693192	3300031708	Soil	MEYAITAAFLLAVVAGSFAAVILGGYGVAHFIVSAL
Ga0306918_104931621	3300031744	Soil	MQYAVTAALLLAIVTGSFAVVILGGYEIARLIALAL
Ga0318492_101798702	3300031748	Soil	LFQDCTAAFLLAVVAGSFAAVILGGYGIARLIAFAL
Ga0318509_102534581	3300031768	Soil	MCVQGLASPMEYTVITAFLLAGVAGSFAAVILGGHEIVCLIAFVL
Ga0307478_114272853	3300031823	Hardwood Forest Soil	SCLEGFPITAAFLLAVVAGSFAAVILGGYGVAQLIASAL
Ga0306919_102465192	3300031879	Soil	MQYAVTAAFLLAIVAGSFAAVILGGYEIARLIALGL
Ga0306919_108509811	3300031879	Soil	MEYTVIATFLLAGVAGSFAAAILGGYEIARLIAFVL
Ga0306925_108724591	3300031890	Soil	MQYAVTAAFLLAIVAGSFAVVILGGYEIARLIALAL
Ga0306921_101694351	3300031912	Soil	MEYAVTAGFLLAVVAGSFAAVILGGYGIVHLIVSAL
Ga0306921_106570201	3300031912	Soil	MEYTVIAAFLLAVVAGSFAAVILGGYEIVRLIAFVL
Ga0306921_117008351	3300031912	Soil	MCGAGLASPMEYTVIAAFLLAVVAGSFAAVILGGYEIARLIAFVL
Ga0306921_124375312	3300031912	Soil	KGRAHCSGTAPMQYAVTAAFLLAVVAGSFAALILGGYEIARLIAFAL
Ga0310916_108294822	3300031942	Soil	MEYTVTAGFLLAVVAGSFAAVILGGYGIAHLIASIL
Ga0310909_106446923	3300031947	Soil	QGLTSPMEYTVIAAFLLAVVAGSFAAVILGGYEIARLIAFVL
Ga0310909_114360391	3300031947	Soil	MEYTVTAGFLLAVVAGSFAAVILGGYGIVHLIASAL
Ga0306926_105923421	3300031954	Soil	MQYAVTAAFLLAIVAGSFAAVILGGYEIARLIALAL
Ga0306926_106453742	3300031954	Soil	MEYTLTAAFLLAVVAASFAAVILGGYGVAHLIASAL
Ga0306926_117350431	3300031954	Soil	MCGAGLASPMEYTVIAAFLLAVVAGSFAAVILGGYEIARLITFVL
Ga0318545_103669902	3300032042	Soil	MQYAITAGFLLAVVAGSFAAVILGGYGIARLITYAL
Ga0318514_105136072	3300032066	Soil	PMEYTVIAAFLLAVVAGSFAAVILGGYEIARLIAFVL
Ga0311301_101723012	3300032160	Peatlands Soil	MEYAVTAGFLLAVVAGSFAAVILGGYGIAHLIASAL
Ga0306920_1009370571	3300032261	Soil	MEYTVITAFLLAGVAGSFAAVILGGQEIVCLIAFVL
Ga0306920_1016698781	3300032261	Soil	MQYALTAAFLLAVVAGSFAAVILGGYGIARLIAFAL
Ga0306920_1023909481	3300032261	Soil	MEYTITVAFLLAIVMGSFAAVILGGYGLAQLIAAAL
Ga0306920_1025761861	3300032261	Soil	LRVFRMEYTVTAGFLLAVVAGSFAAVILGGYGIAHLIASIL
Ga0306920_1033713571	3300032261	Soil	MQGLASPMEYTVIAAFLLTVVAGSFAAVILGGYEIARLIAFVL
Ga0306920_1044580541	3300032261	Soil	RVYRMEYTVTAGFLLAVVAGSFAAVILGGYGIAHLIASIL
Ga0348332_121392401	3300032515	Plant Litter	MEYAITAAFLLAVVAGSFAAVIVGGYGIAQLIVSAL
Ga0335081_118754911	3300032892	Soil	MQYAITAAFLLAVVAGSFAAVILGGYGIVHLIATAL
Ga0310914_109159242	3300033289	Soil	MEYTVIAAFLLAVVAGSFAAVILGGHEIVCLIAFVL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099896

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences