Metagenome / Metatranscriptome Family F100175

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100175
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	114 residues
Representative Sequence	MRRKLITTVGTVACATAIVATIGVGTTSASPSKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLANQAGRPIGDLHIACTQNFDQVAVCVGIFNLSRRGKISVDAS
Number of Associated Samples	51
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	93.07 %
% of genes near scaffold ends (potentially truncated)	91.18 %
% of genes from short scaffolds (< 2000 bps)	96.08 %
Associated GOLD sequencing projects	50
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.569 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (46.078 % of family members)
Environment Ontology (ENVO)	Unclassified (69.608 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.510 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 11.61% β-sheet: 41.96% Coil/Unstructured: 46.43%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF03704	BTAD	59.80
PF06348	DUF1059	2.94
PF04542	Sigma70_r2	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	59.80
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	59.80
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.98
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.98
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.98
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.57 %
Unclassified	root	N/A	28.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.57 %
Unclassified	root	N/A	28.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.57 %
Unclassified	root	N/A	28.43 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	66.67 %
Unclassified	root	N/A	28.43 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.94 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	54.90 %
Unclassified	root	N/A	28.43 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	2.94 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	41.18 %
Unclassified	root	N/A	28.43 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.43 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	26.47 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	3.92 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	2.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.43 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	26.47 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	3.92 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	2.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.43 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	26.47 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	2.94 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2.94 %
Dactylosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.43 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	26.47 %
Actinoplanes globisporus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	2.94 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2.94 %
Dactylosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10060592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	970	Open in IMG/M
3300004633\|Ga0066395_10300496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	877	Open in IMG/M
3300005332\|Ga0066388_100885056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1473	Open in IMG/M
3300005332\|Ga0066388_102243654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	986	Open in IMG/M
3300005332\|Ga0066388_102278597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	979	Open in IMG/M
3300005332\|Ga0066388_104294555	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300005332\|Ga0066388_106006747	Not Available	613	Open in IMG/M
3300005363\|Ga0008090_10053540	Not Available	523	Open in IMG/M
3300005713\|Ga0066905_100712627	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300005713\|Ga0066905_101094081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300005713\|Ga0066905_101143267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300005713\|Ga0066905_101458678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	621	Open in IMG/M
3300005764\|Ga0066903_102804489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	945	Open in IMG/M
3300005764\|Ga0066903_102859485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	936	Open in IMG/M
3300005764\|Ga0066903_103516458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	844	Open in IMG/M
3300005764\|Ga0066903_104399244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	752	Open in IMG/M
3300005764\|Ga0066903_104718841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	725	Open in IMG/M
3300005764\|Ga0066903_105121605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	694	Open in IMG/M
3300005764\|Ga0066903_106176054	Not Available	626	Open in IMG/M
3300005764\|Ga0066903_106775133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	595	Open in IMG/M
3300005764\|Ga0066903_107509973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	562	Open in IMG/M
3300005764\|Ga0066903_107949904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	544	Open in IMG/M
3300005764\|Ga0066903_108366857	Not Available	528	Open in IMG/M
3300009792\|Ga0126374_10914306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300009792\|Ga0126374_11411110	Not Available	567	Open in IMG/M
3300010043\|Ga0126380_10892675	All Organisms → cellular organisms → Bacteria → Terrabacteria group	737	Open in IMG/M
3300010043\|Ga0126380_10961627	All Organisms → cellular organisms → Bacteria → Terrabacteria group	715	Open in IMG/M
3300010043\|Ga0126380_11823860	Not Available	551	Open in IMG/M
3300010046\|Ga0126384_10269909	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1385	Open in IMG/M
3300010046\|Ga0126384_10743295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	873	Open in IMG/M
3300010046\|Ga0126384_12466979	Not Available	504	Open in IMG/M
3300010047\|Ga0126382_11652488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	596	Open in IMG/M
3300010047\|Ga0126382_12018542	Not Available	549	Open in IMG/M
3300010047\|Ga0126382_12547548	Not Available	500	Open in IMG/M
3300010048\|Ga0126373_10723777	Not Available	1054	Open in IMG/M
3300010358\|Ga0126370_10583767	Not Available	961	Open in IMG/M
3300010358\|Ga0126370_10708666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	885	Open in IMG/M
3300010358\|Ga0126370_10886941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
3300010358\|Ga0126370_11033352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	752	Open in IMG/M
3300010358\|Ga0126370_11178489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	711	Open in IMG/M
3300010359\|Ga0126376_10529029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1098	Open in IMG/M
3300010359\|Ga0126376_12090196	Not Available	610	Open in IMG/M
3300010360\|Ga0126372_10931810	Not Available	874	Open in IMG/M
3300010360\|Ga0126372_11397533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	732	Open in IMG/M
3300010360\|Ga0126372_12437256	Not Available	574	Open in IMG/M
3300010361\|Ga0126378_12657720	Not Available	572	Open in IMG/M
3300010361\|Ga0126378_12930101	Not Available	544	Open in IMG/M
3300010361\|Ga0126378_13380521	Not Available	507	Open in IMG/M
3300010362\|Ga0126377_12771913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium	565	Open in IMG/M
3300010362\|Ga0126377_12981507	Not Available	546	Open in IMG/M
3300010366\|Ga0126379_11742892	Not Available	727	Open in IMG/M
3300010366\|Ga0126379_12339686	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	634	Open in IMG/M
3300010366\|Ga0126379_12622886	Not Available	601	Open in IMG/M
3300010366\|Ga0126379_13255711	Not Available	544	Open in IMG/M
3300010366\|Ga0126379_13729157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300010376\|Ga0126381_101769949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	892	Open in IMG/M
3300010376\|Ga0126381_103038816	All Organisms → cellular organisms → Bacteria → Terrabacteria group	666	Open in IMG/M
3300010398\|Ga0126383_10207175	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1888	Open in IMG/M
3300010398\|Ga0126383_12047631	All Organisms → cellular organisms → Bacteria → Terrabacteria group	660	Open in IMG/M
3300010398\|Ga0126383_12171427	Not Available	642	Open in IMG/M
3300010398\|Ga0126383_12851531	All Organisms → cellular organisms → Bacteria → Terrabacteria group	565	Open in IMG/M
3300012948\|Ga0126375_10334819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1066	Open in IMG/M
3300012948\|Ga0126375_10929302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	702	Open in IMG/M
3300012971\|Ga0126369_10025968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4761	Open in IMG/M
3300012971\|Ga0126369_10969852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	937	Open in IMG/M
3300012971\|Ga0126369_11558499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	750	Open in IMG/M
3300012971\|Ga0126369_11688647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	723	Open in IMG/M
3300016270\|Ga0182036_10361149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1122	Open in IMG/M
3300016341\|Ga0182035_10172385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1685	Open in IMG/M
3300016357\|Ga0182032_11557964	Not Available	574	Open in IMG/M
3300016387\|Ga0182040_10312250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1206	Open in IMG/M
3300021560\|Ga0126371_11051234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	955	Open in IMG/M
3300021560\|Ga0126371_12738078	All Organisms → cellular organisms → Bacteria → Terrabacteria group	598	Open in IMG/M
3300021560\|Ga0126371_13138693	Not Available	559	Open in IMG/M
3300027874\|Ga0209465_10063114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1787	Open in IMG/M
3300031564\|Ga0318573_10445153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	697	Open in IMG/M
3300031573\|Ga0310915_10370656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1016	Open in IMG/M
3300031668\|Ga0318542_10149485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1160	Open in IMG/M
3300031723\|Ga0318493_10067079	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1740	Open in IMG/M
3300031723\|Ga0318493_10818366	Not Available	525	Open in IMG/M
3300031768\|Ga0318509_10232350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1028	Open in IMG/M
3300031796\|Ga0318576_10421791	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	630	Open in IMG/M
3300031798\|Ga0318523_10183911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1043	Open in IMG/M
3300031821\|Ga0318567_10126974	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1398	Open in IMG/M
3300031831\|Ga0318564_10313974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	691	Open in IMG/M
3300031833\|Ga0310917_10475572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	850	Open in IMG/M
3300031879\|Ga0306919_10370192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1096	Open in IMG/M
3300031946\|Ga0310910_10273090	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1326	Open in IMG/M
3300031947\|Ga0310909_10048357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3254	Open in IMG/M
3300031947\|Ga0310909_10563465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	953	Open in IMG/M
3300031981\|Ga0318531_10397741	Not Available	623	Open in IMG/M
3300032008\|Ga0318562_10559524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	661	Open in IMG/M
3300032041\|Ga0318549_10146132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1051	Open in IMG/M
3300032043\|Ga0318556_10325097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
3300032052\|Ga0318506_10369491	All Organisms → cellular organisms → Bacteria → Terrabacteria group	636	Open in IMG/M
3300032060\|Ga0318505_10221702	Not Available	888	Open in IMG/M
3300032067\|Ga0318524_10780018	Not Available	505	Open in IMG/M
3300032089\|Ga0318525_10371249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	734	Open in IMG/M
3300032094\|Ga0318540_10517020	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	576	Open in IMG/M
3300033289\|Ga0310914_10058002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3216	Open in IMG/M
3300033289\|Ga0310914_10475180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1131	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.43%
Loam	Environmental → Terrestrial → Soil → Loam	21.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.37%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	21.57%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.98%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	46.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	21.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.98%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100605921	3300000597	Forest Soil	MRRKLITTAGTVACATAIVTTIGVGSTSASPAKRLGETLVVIQSPPRQQYVDLGAPGPSPGDLLEFASTLASQAGTLIGDLHIACTQNFDQ
Ga0066395_103004961	3300004633	Tropical Forest Soil	MRRKLITTVGTVACATAIVATIGVGTTSASPSKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEVASTLASQAGRPIGDLHIACTQNFDQVAVCVGIFNLSRRGK
Ga0066388_1008850562	3300005332	Tropical Forest Soil	GTTSASPSKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLASQAGTPIGDLHIACTQSFDQVAVCVGIFNLSRRGKISVDASPVFPNPTVGMVTGGTGEFQDVRGEAFIDPQPDGTTKITFHLLG*
Ga0066388_1022436541	3300005332	Tropical Forest Soil	MRRKLIRTVGTVACATAIVATIGVGSTSASPGKRLGETLVVIQSPPRQQQVDLGDPGPSPGDLLVFASTLANQAGTPIGDLHIACTQNFD
Ga0066388_1022785972	3300005332	Tropical Forest Soil	MRRKLIRTVGTVACATAIVATIGVGIASASPGKRLGETLVVIQSPPRQQYVDLGVPGPSPGDLLVFASTLASQAGTPVGDLHIACTQNFDQVAVCVGIFNLSGRGKLSVDASPVF
Ga0066388_1042945551	3300005332	Tropical Forest Soil	TAIVATIGVGTTSAAPSKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLANQAGTPVGDLHIACTQNFDQVAVCVGIFNLFRRGKISVDASPVFPNPTVGMVTGGTGEFQNVRGEAHIDPQPDGTTKITFYLLG*
Ga0066388_1060067471	3300005332	Tropical Forest Soil	MRRTLITTVGTVACATAIVAAIGAGTTSAAPAKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLASQAGAPIGDLHIACTQNFDQVAVCVGIFNLSRRGKISVDASPVFPNPTVGMVTGGTAEFQNVRGEAHIDPQPDGTTKITFHL
Ga0008090_100535401	3300005363	Tropical Rainforest Soil	MRRKLITTVGTVACATAIVATIGVGTTSASPSKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLASQAGTPIGDLHIAC
Ga0066905_1007126271	3300005713	Tropical Forest Soil	MRRKLIKTVGTVACATAIVATIGVGSTSASPGKRLGETLVVIQSPPRQLHVDLGDPGPSPGDLLVFASTLANQAGTSIGDLHIACTQNFDQVAVCVGIFNLSRRGKLSVDASPVFPNPTVGMVTGG
Ga0066905_1010940812	3300005713	Tropical Forest Soil	MRRKLIKTVGTVACATAIVATIGVGTTSASPGKRLGETLIVIQSPPRQQHVDLGDPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRRGKLSVDAS
Ga0066905_1011432672	3300005713	Tropical Forest Soil	MRRKLIRTVGTVACATAIVATIGVESTSASPGKRLGETLVVIQSPPRQQHVDLGDPGPSPGDLLVFASTLANQAGTSIGDLHIACTQNFDQV
Ga0066905_1014586781	3300005713	Tropical Forest Soil	MRRKLITTVGTVACATAIVATIGVGTTSASPSKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLANQAGRPIGDLHIACTQNFDQVAVCVGIFNLSRRGKISVDASPVFPNPTVGMVTGGTGEFQNVRGEAHIDPQPDGT
Ga0066903_1028044892	3300005764	Tropical Forest Soil	PSKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRRGKISVDASPVFPNPTVGMVTGGTGEFQNVRGEAHIDPQPDGTTKITFHLLG*
Ga0066903_1028594852	3300005764	Tropical Forest Soil	MGRKLIMTVGTVACASAIVTTIGVGSTSASPAKRLGETLVVIQSPPRQQYVDLGAPGPSPGDLLEFASTLTNPAGTPVGDLHIACTQNFDQVAVCVGIFNLSRRGKLSVDASPVFPNPTVGMVTGGTGEFQNVRGEAHIDPQPDGTTRITFHLLV*
Ga0066903_1035164581	3300005764	Tropical Forest Soil	ACATAIVATIGVGTTSASPSKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRRGKISVDASPVFPNPTVGMITGGTGEFQNVRGEAFIDPQPDGTTKITFHLLG*
Ga0066903_1043992442	3300005764	Tropical Forest Soil	MRRKLITTVGTVACATAIVATIGVGTTSAAPAKRLGETLVVIQSPPRQQYVDLGNPGPSPGDLLEFASTLANQAGTLIGDLHIACTQNFDQVAVCVGIFNLSRRGKLSVDASPVFPNPTVGMVTGG
Ga0066903_1047188412	3300005764	Tropical Forest Soil	MQRKLIKTVGTVACATAIVTTIGVGSTSASPGKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDRVAVCVGIFNLSRRGKLSVDAS
Ga0066903_1051216051	3300005764	Tropical Forest Soil	MRRRLITTAGTVACATAIVTTIGVGSTSASPAKRVGETLVVIQSPPRQQYVDLGAPGPSPGDLLEFASTLASQAGTPVGDLHIACTQNFDQVAVCVGIFNLSGRGKLSVDASPVFPNPTVGMVTG
Ga0066903_1061760542	3300005764	Tropical Forest Soil	MRRKLIKTAGTVACATAIVATIGVGTTSASPSKRSGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLANRAGRPIGDLHIACTQSFDQVAVCVGIFNLSRRGKISVDASPVFPNPTVGMVTGGTGEFQNVR
Ga0066903_1067751331	3300005764	Tropical Forest Soil	MRRKLIRTVGTVACATAIVATIGVGIASASPGKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLVFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRRGKLSVDASP
Ga0066903_1075099732	3300005764	Tropical Forest Soil	MRRKLITTAGTVACATAIVTTIGVGSTSASPAKRLGETLVVIQSPPRQQYVDLGAPGPSPGDLLEFASTLANQAGTPVGDLHIACTQNFDQVAV
Ga0066903_1079499041	3300005764	Tropical Forest Soil	MRRRLITTVGTVACATAIVATIGAGTTSASPSKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEVASTLASQAGRPIGDLHIACTQNFDQVAVCVGIFNL
Ga0066903_1083668571	3300005764	Tropical Forest Soil	MRRKLIKTVGTVACATAIVTTIGVGSTSASSAKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLVFASTLANQAGTPVGDLHIACTQNFDQVAVCVGIFNLSGRGKLSVDASPVFPNPTVGMV
Ga0126374_109143062	3300009792	Tropical Forest Soil	MRRTLIRTVGTAVGAAAVLATIGVGITSASTRTSQGETLVVIQSPPRQQYVDLGAPGPSPGDLLEVASTLANQAESPIGDLHIACTQNFDQVAV*
Ga0126374_114111101	3300009792	Tropical Forest Soil	MRRKLIKTVGTVACAAAIVTTIGVGSTSASPAKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLIFASTLASQAGTPVGDLHIACTQNFDQVAVCAGIFNLSRRGKLSVDASPVFP
Ga0126380_108926751	3300010043	Tropical Forest Soil	MRRKLIMTVGTVACATAIVTTIGVGSTSASPAKRLGETLVVIQSPPRQQYVDLGAPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRRGKLSVDASPVFPNPTVGMVTGGTGEFQNAR
Ga0126380_109616271	3300010043	Tropical Forest Soil	MRRKLIKTVGTVACAAAIVTTIGVGSTSASPAKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLIFASTLASQAGTPVGDLHIACTQNFDQVAVCAGIFNLSRRGKLSVDASPVFPNPTVGMVTGGTGEF
Ga0126380_118238601	3300010043	Tropical Forest Soil	MRRKLIKTVGTVACATAIVATIGVGTTSASPGKRLGETLIVIQSPPRQQHVDLGDPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQ
Ga0126384_102699091	3300010046	Tropical Forest Soil	MRRKLITTVGTVACATAIVATIGVGTTSASPSKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLANQAGRPIGDLHIACTQNFDQVAVCVGIFNLSRRGKISVDASPVFPNPTVGMVTGGTAEFQNVRGEAHIDPQPDGTTKITFHLLG*
Ga0126384_107432951	3300010046	Tropical Forest Soil	MQRKLITTAGTVACATAIVATIGAGTTSAAPSKRLGETLVVIQSPPRQQYVDLGNPGPSPGDLLEFASTLANQAGAPIGDLHIACTQNFDQVAVCVGIFNLFRRGKLSVDASPVFPNSTVGMVTGGTGDFQNVR
Ga0126384_124669791	3300010046	Tropical Forest Soil	MRRKLIMTAGAVACATAIVATIGAGSTSASPVKRLGETLVVIQSPPRQQHVDLGDPGPSPGDLLVFASTLASQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRRGKLSVDASPVFPNPT
Ga0126382_116524882	3300010047	Tropical Forest Soil	MRRKLIMTVGTVACATAIVTTIGVGSTSASPAKRLGETLVVIQSPPRQQYVDLGAPGPSPGDLLEFASTLANQAGTPIGDLH
Ga0126382_120185421	3300010047	Tropical Forest Soil	MRRKLIRTVGTVACATAIVATIGVESTSASPGKRLGETLVVIQSPPRQQHVDLGDPGPSPGDLLVFASTLANQAGTSIGDLHIACTQNFDQVAVCVGIFNLSRRGK
Ga0126382_125475481	3300010047	Tropical Forest Soil	MRRKLIKTVGTVACATAIVATIGVGTTSASPGKRLGETLIVIQSPPRQQHVDLGDPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRRGKLSVDASPVFPNPTVGMVTGGTGEFQNV
Ga0126373_107237771	3300010048	Tropical Forest Soil	MRRKLITTVGTVACATAIVATIGVGTTSASPSKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRRGKISVDASPVFPNPTVGMVTGGTAEFQNVRGEAHIDPQPDGTTKITFHLLG*
Ga0126370_105837671	3300010358	Tropical Forest Soil	MRRKLIKTVGTVACATAIVTTIGVGTTSASPGKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFDLSRRGKISVDASPVFPNPTVGMVTGGTAEFQNVRGEAHIDPQPDGTTKITFHLLG*
Ga0126370_107086662	3300010358	Tropical Forest Soil	MRRKLITTVGTVACATTIVTTIGVGTTSASPGKRLGQTLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLASQAGTPIGDLHIACTQNFDQVAVCVGIFDLSRRGKISVDASPVFP
Ga0126370_108869411	3300010358	Tropical Forest Soil	MRRTLIRTVGTVACATAVVATIGVGTTLASPAKSLGETLIVIQSPPRQQFVDLGDPGPSPGDLLEFASTLANQTGTPIGDLHISCTQSFDQVAVCVGIFNLSRRGK
Ga0126370_110333521	3300010358	Tropical Forest Soil	MRRKLITTVGTVACATAIVATIGVGTTSASPSKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSR
Ga0126370_111784891	3300010358	Tropical Forest Soil	MRRTLITTVGTVACATAIVAAIGAGTTSAAPAKRPGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLASQAGAPIGDLHIACTQNFDQVAVCVGIFNLSRRGKISVDASPV
Ga0126376_105290292	3300010359	Tropical Forest Soil	MAHSLATPKLQNEKGREMRRKLITAVGTVAFATAIVATIGVGITSASTGTRPGETLVVIQSPPRQQYVDLGAPGPSPGDLLVFASTLTDQPGSPVGDLHIGCTQNFDQVAVCVGIFNLSGRGKISVDASPVFPNPTVGMV
Ga0126376_120901961	3300010359	Tropical Forest Soil	MQRKLITTAGTVACATAIVATIGAGTTSAAPAKRLGETLVVIQSPPRQQYVDLGNPGPSPGDLLEFASTLANQAGAPVGDLHIACTQNFDQVAVCVGI
Ga0126372_109318102	3300010360	Tropical Forest Soil	MRRKLITTVGTVACATAIVATIGAGTTSASPSKRLGGTLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLASQAGTPIGDLHIACTQSFDQVAVCVGIFNLSRRGKISVDASPVFPNPTVGMVTGGTGEFQDVRGEAFIDPQPDGTTKITFHLLG*
Ga0126372_113975332	3300010360	Tropical Forest Soil	MRRTLIRTVGTAVGAAAVLATIGVGITSASTRTSQGETLVVIQSPPRQQYVDLGAPGPSPGDLLEVASTLANQAGSPIGDLHIACTQNFDQVAVCVGIF
Ga0126372_124372561	3300010360	Tropical Forest Soil	MRRKLIRTAGAVACATAIVTTIGVGITSASAGTRLDETLVVIQSPPRQQYVDLGAPGPSPGDLLEFASTLANQAGTPIGDLHISCALNFDQVAVCVGIFNLSRRGKLSVDASPVFPNPTVGMVTGGT
Ga0126378_126577201	3300010361	Tropical Forest Soil	MQRKLITTAGTVACATAIVATIGAGTTSAAPSKRLGETLVVIQSPPRQQYVDLGNPGPSPGDLLEFASTLANQAGAPVGDLHIACTQNFDQVAVCVGIFNLSRRGKISVDASP
Ga0126378_129301011	3300010361	Tropical Forest Soil	MRRKLITTVGTVACATAIVATIGVGTTSASPSKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGI
Ga0126378_133805211	3300010361	Tropical Forest Soil	MRRKLITTVGTVACATAIVATIGVGTTSASPSKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLANQAGRPIGDLHIACTQNFDQVAVCVGIFNLSRRGKISVDAS
Ga0126377_127719131	3300010362	Tropical Forest Soil	MRRKLIMTAGAVACATAIVATIGAGSTSASPVKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLVFASTLANQAGRPIGDLHIACTQNFDQV
Ga0126377_129815071	3300010362	Tropical Forest Soil	MRRKLITTVGTVACATAIVATIGVGTTSASPSKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLANQAGRPIGDLHIACTQNFDQVAV
Ga0126379_117428921	3300010366	Tropical Forest Soil	MRRKLIKTVGTVACAAAIVTTIGVGSTSASPSKRLGETLVVIQSPPRQQYVDLGAPGPSPGDLLEFASTLASQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRRGKLSVDASPVFPNPTVGMVTGGTGEFQNVRGEAHIDPQPDGTTKITFHLLG*
Ga0126379_123396861	3300010366	Tropical Forest Soil	MRRKLITTVGTVACVTAIVATIGAGTTSASPSKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRRGK
Ga0126379_126228861	3300010366	Tropical Forest Soil	MRRKLIMTVGTVACASAIVTTIGVGSTSASPAKRLGETLVVIQSPPRQQYVDLGAPGPSPGDLLEFASTLTTPAGTPIGDLHIACTQNFDQVAVCVGIFNLSRRGKLSVDASP
Ga0126379_132557111	3300010366	Tropical Forest Soil	MRRTLIRTVGTVACATAVVATIGVGTTLASPAKSLGETLIVIQSPPRQQFVDLGDPGPSPGDLLEFASTLANQTGTPIGDLHIA
Ga0126379_137291571	3300010366	Tropical Forest Soil	MRRKLIKTVGTVACAAAIVTTIGVGSTSASPAKRLGETLVVIQSPPRQQYVDLGAPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSGRGKLSVDASPVFPNPTVGMVTGGTGEFQNVRGEA
Ga0126381_1017699492	3300010376	Tropical Forest Soil	MRRKLIMTVGTVACATAIVATIGVGIASASPGKRLGETLVVIQSPPRQQYVDLGTPGPSPGDLLVFASTLANQAGTPIGDLHIGCTLNFDQVAVCVGIFNLFSRGKLSVD
Ga0126381_1030388162	3300010376	Tropical Forest Soil	MRRKLIRTVGTVACATAIVATIGVGIASASPGKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLVFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRRGKLSV
Ga0126383_102071751	3300010398	Tropical Forest Soil	MRRKLITTVGTVACATAIVATIGVGTTSASPSKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLANQAGRPIGDLHIACTQNFDQVAVCVGIFNLSRRGK
Ga0126383_120476311	3300010398	Tropical Forest Soil	MRRKLITTVGTVACVTAIVATIGAGTTSASPSKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEVASTLASQAGRPIGDLHIACTQNFDQVAVCVGIFNLSRRGKISVDAS
Ga0126383_121714271	3300010398	Tropical Forest Soil	MRRKLIKTVGTVACATAIVATIGVGSTSASPGKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLANQAGAPIGDLHIACTQNFDQVAVCVGIFNLSRRGKLSVDASPVFPNPTVGMVTGGTGEFQNV
Ga0126383_128515312	3300010398	Tropical Forest Soil	MRRKLIKTVGTVACATAIVATIGVESTSASPGKRLGETLVVIQSPPRQQHVDLGDPGPSPGDLLVFASTLANQAGTPIGDLH
Ga0126375_103348192	3300012948	Tropical Forest Soil	MRRKLIKTVGTVACATAIVATIGVGTTSASPGKRLGETLVVIQSPPRQQHVDLGDPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRRGKLSVDASPVFPNPTVGMVTGGTGEFQNVRGEAHIDPQ
Ga0126375_109293022	3300012948	Tropical Forest Soil	MQRKLITTAGTVACATAIVATIGAGTTSAAPSKRLGETLVVIQSPPRQQYVDLGNPGPSPGDLLEFASTLANQAGAPVGDLH
Ga0126369_100259686	3300012971	Tropical Forest Soil	MRRKLITTVGTVACVTAIVATIGAGTTSASPSKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLASQAGRPIGDLHIACTQNFDQVAVCVGIFN
Ga0126369_109698521	3300012971	Tropical Forest Soil	MRRKLIKTVGTLACATAFVTTIGVGSTSASSAKRLGETLIVIQSPPRQQYVDLGDPGPSPGDLLVFASTLANQAGTPVGDLHIACTQNFDQVAVCVGIFNLSGRGKLSVDASPVFPNPTVGMVTGGTGEF
Ga0126369_115584991	3300012971	Tropical Forest Soil	MRRKLIKTAGTVACATAIVATIGVGTTSASPSKRSGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLANRAGRPIGDLHIACTQSFDQVAVCVGIFNLSRRGKISVDASPVFPNPTVGMVTGGTGEFQN
Ga0126369_116886471	3300012971	Tropical Forest Soil	MQRKLIKTVGTVACATAIVTTIGVGSTSASPGKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDRVAVC
Ga0182036_103611492	3300016270	Soil	MRRKLITTVGTVACVTAIVATIGAETTSASPSKRLGETLVVIQSPPRQQYVDLGNPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSGRGKLSVDASPVFPNPTVGMVTGGTGEFQDVRGEARIDPQP
Ga0182035_101723851	3300016341	Soil	MRRKLIRTVGTVACATAIVATIGVGIASASPGKRLGETLVVIQSPPRQQYVDLGAPGPSAGDLLVFASTLTNLAGTPVGDLHIA
Ga0182032_115579641	3300016357	Soil	MRRKLIRTVGTVACATAIVATIGVGIASASPGKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLVFASTLASQAGTPIGDLHIACTQNFDRVAVCVGIFNLSGRGKLSVDASPVFPNPTIGMITGGTGEFQ
Ga0182040_103122501	3300016387	Soil	MRRKLIRTVGTVACATAIVATIGVGIASASPAMGPGETLVVIQSPPRQQYVDLGDPGPSPGDLLVFASTLASQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRRGK
Ga0126371_110512341	3300021560	Tropical Forest Soil	SRTRKGGEMRRKLITTVGTVACATAIVATIGVGTTSASPSKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEVASTLASQAGRPIGDLHIACTQNFDQVAVCVGIFNLSRRGKISVDASPVFPNPTVGMVTGGTGEFQNVRGEAHIDPQPDGTTKITFHLLG
Ga0126371_127380781	3300021560	Tropical Forest Soil	MRRKLITTVGTVACATAIVATIGVGTTSASPSKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLASQAGTPIGDLHIACTQNFDQ
Ga0126371_131386931	3300021560	Tropical Forest Soil	MRRKLIKTVGTLACATAFVTTIGVGSTSASSAKRLGETLIVIQSPPRQQYVDLGDPGPSPGDLLVFASTLANQAGTPVGDLHIACTQNFDQVAVCVGIFNLSGRGKLSVDASPVFPNPTVGMVTG
Ga0209465_100631141	3300027874	Tropical Forest Soil	MRRKLITTVGTVACATAIVATIGVGTTSASPSKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEVASTLASQAGRPIGDLHIACTQNFDQVAVCVGIFNLSRRGKISVDASPVFPNPTVGMVTGGTGEFQNVRGEAFIDPQPDGTTKITFHLLG
Ga0318573_104451532	3300031564	Soil	MRRKLIRTVGTVACATAIVATIGVGIASASPAMGPGETLVVIQSPPRQQYVDLGDPGPSPGDLLVFASTLASQAGTPIGDLHIACTQNFDRVAVCVGI
Ga0310915_103706561	3300031573	Soil	MRRKLITTVGTVACVTAIVATIGAETTSASPSKRLGETLVVIQSPPRQQYVDLGNPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRRGKISVDASP
Ga0318542_101494852	3300031668	Soil	MRRKLITTVGTVACVTAIVATIGAETTSASPSKRLGETLVVIQSPPRQQYVDLGNPGPSPGDLLEFASTLANQAGTPIGDLHIACTQSF
Ga0318493_100670793	3300031723	Soil	MRRKLITTVGTVACVTAIVATIGAETTSASPSKRLGETLVVIQSPPRQQYVDLGNPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRRGKISVDA
Ga0318493_108183661	3300031723	Soil	MRRKFITTAGTVVCATAVVATIGAGTTSASPSKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLEFASTLASQAGTPVGDLHIACTQNFDQVAVCVGIFNLSRRGKISVDASPVFPN
Ga0318509_102323501	3300031768	Soil	MRRKLITTVGTVACVTAIVATIGAETTSASPSKRLGETLVVIQSPPRQQYVDLGNPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFN
Ga0318546_102699022	3300031771	Soil	MRPKLITTVGTVACATAIVATIGVGTTSASPAKRLGETLVVIQSPPRQQYVDFGNPGPSPGDLLEFASTLANQAGTPIGDLH
Ga0318576_104217911	3300031796	Soil	MRRKLITTVGTVACVTAIVATIGAETTSASPSKRLGETLVVIQSPPRQQYVDLGNPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRRGK
Ga0318523_101839112	3300031798	Soil	MRRKLITTVGTVACATAILATIGVGTTSASPAKRLGETLVAIQSPPRQQYVDLGNPGPSPGDLLEFASTLANQAGIPIGDLHI
Ga0318567_101269743	3300031821	Soil	MRRKLITTVGTVACVTAIVATIGAETTSASPSKRLGETLVVIQSPPRQQYVDLGNPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVG
Ga0318564_103139742	3300031831	Soil	MRRKLIMTVGTVACAGAIVATIGAGSSSASPAKRLGETLVVIQSPPRQQYVDLGAPGPSAGDLLVFASTLTNLAGTPVGDLHIACTQNFDQVAVCVGIFNLSRRGKLS
Ga0310917_104755721	3300031833	Soil	MRRKLIRTVGTVACATAIVATIGVGIASASPGKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLVFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRR
Ga0306919_103701922	3300031879	Soil	MRRKLITTVGTVACVTAIVATIGAETTSASPSKRLGETLVVIQSPPRQQYVDLGNPGPSPGDLLEFASTLANQAGTPIGDLHIA
Ga0310910_102730901	3300031946	Soil	MRRKLITTVGTVACVTAIVATIGAETTSASPSKRLGETLVVIQSPPRQQYVDLGNPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRRGKISVDASPVFPNPTVGMVTGGTGEFQKVR
Ga0310909_100483575	3300031947	Soil	MRRKLITTVGTVACVTAIVATIGAETTSASPSKRLGETLVVIQSPPRQQYVDLGNPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRRGKISVDASPVFPNPTVGMVTGGTGEFQNVRGEAHIDPQPEG
Ga0310909_105634652	3300031947	Soil	MRRKLIRTVGTVACATAIVATIGVGIASASPGKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLVFASTLANQAGTPIGDLHIACTQ
Ga0318531_103977411	3300031981	Soil	MRRKLITTVGTVACVTAIVATIGAETTSASPSKRLGETLVVIQSPPRQQYVDLGNPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRRGKISVDASPVFPNPTVGMVTGGTGEFQ
Ga0318562_105595242	3300032008	Soil	MRPKLITTVGTVACATAIVATIGVGTTSASPAKRLGETLIVIQSPPRQQYVDLGDPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVG
Ga0318549_101461321	3300032041	Soil	MRRKLITTVGTVACVTAIVATIGAETTSASPSKRLGETLVVIQSPPRQQYVDLGNPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLS
Ga0318556_103250971	3300032043	Soil	MRRKLIMTVGTVACAGAIVATIGAGSSSASPAKRLGETLVVIQSPPRQQYVDLGAPGPSAGDLLVFASTLTNLAGTPVGDLHIACTQNFD
Ga0318506_103694912	3300032052	Soil	MRRKLIRTVGTVACATAIVATIGVGIASASPAMGPGETLVVIQSPPRQQYVDLGNPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRR
Ga0318505_102217021	3300032060	Soil	ACATAIVATIGVGIASASPGKRLGETLVVIQSPPRQQYVDLGNPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRRGKISVDASPVFPNPTVGMVTGGTGEFQNVRGEAHIDPQPDGTTKITFHLLG
Ga0318524_107800181	3300032067	Soil	MRRKLITTVGTVACVTAIVATIGAETTSASPSKRLGETLVVIQSPPRQQYVDLGNPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRRGKISVDASPVFPNPT
Ga0318525_103712491	3300032089	Soil	MRRKLIRTVGTVACATAIVATIGVGSTSASPAKRLGETLVVIQSPPRQQYVDFGNPGPSPGDLLEFASTLANQAGTPIGDLH
Ga0318540_105170201	3300032094	Soil	MRRKLIRTVGTVACATAIVATIGVGIASASPGKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLVIASTLASQAGTPIGDLHIACT
Ga0310914_100580024	3300033289	Soil	MRRKLIRTVGTVACATAIVATIGVGIASASPGKRLGETLVVIQSPPRQQYVDLGDPGPSPGDLLVFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSRRGKLSVDA
Ga0310914_104751802	3300033289	Soil	MRRKLITTVGTVACVTAIVATIGAETTSASPSKRLGETLVVIQSPPRQQYVDLGNPGPSPGDLLEFASTLANQAGTPIGDLHIACTQNFDQVAVCVGIFNLSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100175

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences