Metagenome Family F100248

Basic Information
Family ID	F100248
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	50 residues
Representative Sequence	MTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFRQPAKRQYAA
Number of Associated Samples	86
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	65.69 %
% of genes near scaffold ends (potentially truncated)	56.86 %
% of genes from short scaffolds (< 2000 bps)	83.33 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (86.275 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (23.529 % of family members)
Environment Ontology (ENVO)	Unclassified (60.784 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (42.157 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 92.59% β-sheet: 0.00% Coil/Unstructured: 7.41%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF14216	DUF4326	20.59
PF01223	Endonuclease_NS	0.98
PF00436	SSB	0.98
PF04098	Rad52_Rad22	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.98
COG1864	DNA/RNA endonuclease G, NUC1	Nucleotide transport and metabolism [F]	0.98
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.27 %
All Organisms	root	All Organisms	13.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.27 %
cellular organisms	root	All Organisms → cellular organisms	13.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.27 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	8.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.27 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	8.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.27 %
Candidatus Woesearchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota	8.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.27 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	8.82 %
Vibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.27 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	8.82 %
Vibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918008\|ConsensusfromContig345132	Not Available	693	Open in IMG/M
3300004806\|Ga0007854_10001354	Not Available	15571	Open in IMG/M
3300009175\|Ga0073936_10185379	Not Available	1499	Open in IMG/M
3300009519\|Ga0116108_1034359	Not Available	1662	Open in IMG/M
3300009547\|Ga0116136_1031710	Not Available	1606	Open in IMG/M
3300009552\|Ga0116138_1062149	Not Available	1057	Open in IMG/M
3300009627\|Ga0116109_1022840	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300009628\|Ga0116125_1143892	Not Available	658	Open in IMG/M
3300009629\|Ga0116119_1121956	Not Available	652	Open in IMG/M
3300009629\|Ga0116119_1137194	Not Available	611	Open in IMG/M
3300009632\|Ga0116102_1133669	Not Available	692	Open in IMG/M
3300009634\|Ga0116124_1179692	Not Available	589	Open in IMG/M
3300009635\|Ga0116117_1112258	Not Available	687	Open in IMG/M
3300009643\|Ga0116110_1051842	All Organisms → cellular organisms → Bacteria → Proteobacteria	1471	Open in IMG/M
3300009764\|Ga0116134_1058983	Not Available	1449	Open in IMG/M
3300010341\|Ga0074045_10984365	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300014155\|Ga0181524_10157455	Not Available	1166	Open in IMG/M
3300014165\|Ga0181523_10181326	Not Available	1226	Open in IMG/M
3300014200\|Ga0181526_10228773	Not Available	1187	Open in IMG/M
3300014491\|Ga0182014_10007070	Not Available	11842	Open in IMG/M
3300014492\|Ga0182013_10215904	Not Available	1139	Open in IMG/M
3300014492\|Ga0182013_10447828	Not Available	683	Open in IMG/M
3300014492\|Ga0182013_10676472	Not Available	519	Open in IMG/M
3300014493\|Ga0182016_10173209	Not Available	1425	Open in IMG/M
3300014494\|Ga0182017_10064840	Not Available	2419	Open in IMG/M
3300014839\|Ga0182027_11927778	Not Available	568	Open in IMG/M
3300017929\|Ga0187849_1246218	Not Available	682	Open in IMG/M
3300017931\|Ga0187877_1038336	Not Available	2299	Open in IMG/M
3300017931\|Ga0187877_1408490	Not Available	512	Open in IMG/M
3300017935\|Ga0187848_10012336	Not Available	4837	Open in IMG/M
3300017938\|Ga0187854_10081803	Not Available	1544	Open in IMG/M
3300017940\|Ga0187853_10028953	Not Available	2981	Open in IMG/M
3300017946\|Ga0187879_10150683	Not Available	1316	Open in IMG/M
3300018002\|Ga0187868_1120059	Not Available	989	Open in IMG/M
3300018004\|Ga0187865_1241574	Not Available	606	Open in IMG/M
3300018009\|Ga0187884_10379119	Not Available	569	Open in IMG/M
3300018009\|Ga0187884_10436023	Not Available	527	Open in IMG/M
3300018013\|Ga0187873_1348186	Not Available	541	Open in IMG/M
3300018016\|Ga0187880_1049010	Not Available	2268	Open in IMG/M
3300018017\|Ga0187872_10034114	Not Available	2820	Open in IMG/M
3300018024\|Ga0187881_10114754	Not Available	1204	Open in IMG/M
3300018035\|Ga0187875_10728241	Not Available	520	Open in IMG/M
3300018037\|Ga0187883_10156703	Not Available	1172	Open in IMG/M
3300018038\|Ga0187855_10041833	Not Available	2885	Open in IMG/M
3300018042\|Ga0187871_10665150	Not Available	579	Open in IMG/M
3300018046\|Ga0187851_10023709	Not Available	4259	Open in IMG/M
3300018046\|Ga0187851_10353535	Not Available	845	Open in IMG/M
3300018047\|Ga0187859_10031037	Not Available	2892	Open in IMG/M
3300018047\|Ga0187859_10661333	Not Available	592	Open in IMG/M
3300018057\|Ga0187858_10166799	Not Available	1457	Open in IMG/M
3300022524\|Ga0224534_1001871	Not Available	10496	Open in IMG/M
3300022555\|Ga0212088_10243916	Not Available	1364	Open in IMG/M
3300022824\|Ga0224518_1015994	Not Available	560	Open in IMG/M
3300022849\|Ga0224531_1003007	Not Available	6415	Open in IMG/M
3300022875\|Ga0224553_1048080	Not Available	941	Open in IMG/M
3300023068\|Ga0224554_1025435	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1761	Open in IMG/M
3300023068\|Ga0224554_1049634	Not Available	1099	Open in IMG/M
3300023101\|Ga0224557_1080915	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1376	Open in IMG/M
3300025460\|Ga0208562_1112317	Not Available	518	Open in IMG/M
3300026456\|Ga0255351_1040495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae	1008	Open in IMG/M
3300026456\|Ga0255351_1070526	Not Available	660	Open in IMG/M
3300026502\|Ga0255350_1021022	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1780	Open in IMG/M
3300027854\|Ga0209517_10091186	Not Available	2081	Open in IMG/M
3300027854\|Ga0209517_10157800	Not Available	1444	Open in IMG/M
3300027905\|Ga0209415_10643647	Not Available	774	Open in IMG/M
3300028070\|Ga0255353_1019103	Not Available	1823	Open in IMG/M
3300028090\|Ga0255349_1029446	Not Available	1235	Open in IMG/M
3300028090\|Ga0255349_1082855	Not Available	595	Open in IMG/M
3300028268\|Ga0255348_1017148	Not Available	1479	Open in IMG/M
3300028552\|Ga0302149_1015583	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	2002	Open in IMG/M
3300028762\|Ga0302202_10124633	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1427	Open in IMG/M
3300028762\|Ga0302202_10133095	Not Available	1363	Open in IMG/M
3300028762\|Ga0302202_10310423	Not Available	757	Open in IMG/M
3300028766\|Ga0302269_1136499	Not Available	708	Open in IMG/M
3300028779\|Ga0302266_10198908	Not Available	762	Open in IMG/M
3300028788\|Ga0302189_10205698	Not Available	822	Open in IMG/M
3300028813\|Ga0302157_10239461	Not Available	1018	Open in IMG/M
3300028909\|Ga0302200_10143720	Not Available	1244	Open in IMG/M
3300029883\|Ga0311327_10587110	Not Available	671	Open in IMG/M
3300029908\|Ga0311341_10134206	Not Available	1619	Open in IMG/M
3300029914\|Ga0311359_10467813	Not Available	970	Open in IMG/M
3300029915\|Ga0311358_10270182	Not Available	1468	Open in IMG/M
3300029915\|Ga0311358_10500482	Not Available	947	Open in IMG/M
3300029916\|Ga0302148_1221678	Not Available	534	Open in IMG/M
3300029919\|Ga0302141_1043623	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1224	Open in IMG/M
3300029956\|Ga0302150_10191626	Not Available	774	Open in IMG/M
3300029985\|Ga0302280_1241280	Not Available	617	Open in IMG/M
3300029988\|Ga0302190_10075400	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1566	Open in IMG/M
3300029988\|Ga0302190_10343610	Not Available	576	Open in IMG/M
3300030011\|Ga0302270_10544567	Not Available	601	Open in IMG/M
3300030051\|Ga0302195_10434489	Not Available	565	Open in IMG/M
3300031259\|Ga0302187_10262616	Not Available	865	Open in IMG/M
3300031524\|Ga0302320_10914288	Not Available	947	Open in IMG/M
3300031524\|Ga0302320_11886917	Not Available	565	Open in IMG/M
3300031673\|Ga0307377_10000910	All Organisms → cellular organisms → Bacteria	39280	Open in IMG/M
3300031759\|Ga0316219_1322865	Not Available	525	Open in IMG/M
3300032160\|Ga0311301_10720440	Not Available	1396	Open in IMG/M
3300033405\|Ga0326727_10059216	Not Available	5787	Open in IMG/M
3300033818\|Ga0334804_032412	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1659	Open in IMG/M
3300033822\|Ga0334828_104351	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	695	Open in IMG/M
3300033982\|Ga0371487_0469817	Not Available	533	Open in IMG/M
3300034091\|Ga0326724_0242583	Not Available	1037	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.86%
Aquatic	Environmental → Aquatic	43.14%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	43.14%
Peat	Environmental → Terrestrial → Peat	43.14%
Soil	Environmental → Terrestrial → Soil	13.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	43.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	39.22%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	4.90%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.96%
Lake	Environmental → Aquatic → Freshwater → Lake	1.96%
Clay	Environmental → Terrestrial → Soil → Clay	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	43.14%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	26.47%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	12.75%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	6.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.98%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.98%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.98%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	23.53%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	23.53%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	15.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	12.75%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	4.90%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.94%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.94%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	1.96%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.96%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.98%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.98%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.98%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300004806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009627	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300022824	Peat soil microbial communities from Stordalen Mire, Sweden - IR.B.S.T-25	Environmental	Open in IMG/M
3300022849	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T100	Environmental	Open in IMG/M
3300022875	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 10-14	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300025460	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150 (SPAdes)	Environmental	Open in IMG/M
3300026456	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r2	Environmental	Open in IMG/M
3300026502	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r1	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028070	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T25	Environmental	Open in IMG/M
3300028090	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v15	Environmental	Open in IMG/M
3300028268	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v5	Environmental	Open in IMG/M
3300028552	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_1	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028766	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_2	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029916	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1	Environmental	Open in IMG/M
3300029919	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2	Environmental	Open in IMG/M
3300029956	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2	Environmental	Open in IMG/M
3300029985	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_1	Environmental	Open in IMG/M
3300029988	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_3	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031673	Soil microbial communities from Risofladan, Vaasa, Finland - TR-3	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M
3300033822	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Bog_all_C_00261560	2140918008	Soil	MTKLTILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFRQPAKRQYAA
Ga0007854_1000135420	3300004806	Freshwater	MTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFRQPAKRQYAA*
Ga0073936_101853792	3300009175	Freshwater Lake Hypolimnion	MTKLSILAILSLAFIGVTRLAQFVLSMFVIVFFGFTTFELIRTFRQPAKRQYAA*
Ga0116108_10343594	3300009519	Peatland	MTKLSIFAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFRQPAKRQYAA*
Ga0116136_10317103	3300009547	Peatland	MTKLSILAILSLLFIGVTRIAQFVVALFVIVFFGFTTFELIRTFRQPARRQQAA*
Ga0116138_10621492	3300009552	Peatland	MTKLSILAILSLLFIGVTRIAQFVMALFVIVFFGFTTFELIRTFRQPARRQQAA*
Ga0116109_10228404	3300009627	Peatland	VTRIAQFVMALFVIVFFGFTTFELIRTLRKPARRQQAA*
Ga0116125_11438921	3300009628	Peatland	MTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFKQSAKSQYAA*
Ga0116119_11219563	3300009629	Peatland	MTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFRQPAKKQYAA*
Ga0116119_11371941	3300009629	Peatland	ILSLLFIGVTRIAQFVMALFVIVFFGFMTFELIRTFRQPAKRQYAA*
Ga0116102_11336692	3300009632	Peatland	MTKLSILAILSLLFIGVTRIAQFVMALFVIVFFGFTTFELIRTLRQPAKRQYAA*
Ga0116124_11796921	3300009634	Peatland	RIEGSCMTKLSILAILSLLFIGVTRIAQFVMALFVIVFFGFTTFELIRTFRQPARRQQAA
Ga0116117_11122583	3300009635	Peatland	LSLLFIGVTRIAQFVMALFVIVFFGFTTFELIRTFRQPAKRQYAA*
Ga0116110_10518424	3300009643	Peatland	MTKLSILAIFSLAFIGVTRLAQFVLSVFVIVFFGFTTFELIRTFRQPAKRQYAA*
Ga0116134_10589832	3300009764	Peatland	MTKLSILAILSLLFIGVTRIAQFVMALFVIVFFGFTTFELIRTFRQPAKRQYAA*
Ga0074045_109843652	3300010341	Bog Forest Soil	EGSCMTKLSILAILSLTFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFRQPAKRQYAA*
Ga0181524_101574553	3300014155	Bog	MTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFRQPAKRQYTA*
Ga0181523_101813264	3300014165	Bog	ILAILSLLFIGVTRIAQFVMALFVIVFFGFTTFELIRTFRQPARRQQAA*
Ga0181526_102287731	3300014200	Bog	MTKLSILAILSLVFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFRQPAKRQYAA*
Ga0182014_1000707012	3300014491	Bog	MTKLSLVAILSLVFFGVTRVAHFVLSLFIILLFGITIFELIRTFRQLAKRQYAA*
Ga0182013_102159043	3300014492	Bog	MSKLTILAILSLVFIGVTRLAQFVLSLFVIVFFGFTTFELIRTLRQPAKRQYAE*
Ga0182013_104478283	3300014492	Bog	MTKLSILAILSLLFIGVTRIAQFVMALFVIVFFGFTTFELIRTLRQPARRQQAA*
Ga0182013_106764723	3300014492	Bog	SLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFKQPAKRQYAA*
Ga0182016_101732094	3300014493	Bog	MTKLSIFAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFKQPAKRQYAA*
Ga0182017_100648404	3300014494	Fen	MTKLSILAILSLAFIGVTRLAQFVLSLFVVVFFGFTTFELIRTFRQPAKRQYAA*
Ga0182027_119277782	3300014839	Fen	MTKLTILAILSLVFIGVTRLAHFVLSLFVIVFFGFTTFELIRTFKQPAKRQY
Ga0187849_12462181	3300017929	Peatland	MTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGF
Ga0187877_10383363	3300017931	Peatland	MTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFRQPAKRQYAA
Ga0187877_14084902	3300017931	Peatland	MTKLSILAILSLLFIGVTRIAQFVMALFVIVFFGFTTFELIRTFRQPAKRQYAA
Ga0187848_100123367	3300017935	Peatland	MTKLSILAILSLLFIGVTRIAQFVMALFVIVFFGFTTFELIRTFRQPARRQQAA
Ga0187854_100818034	3300017938	Peatland	MTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFKQPAKRQYAA
Ga0187853_100289537	3300017940	Peatland	AFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFRQPARRQQAA
Ga0187879_101506833	3300017946	Peatland	MTKLSILAILSLLFIGVTRIAQFVMALFVIVFFGFTTFELIRTLRQPAKRQYAA
Ga0187868_11200592	3300018002	Peatland	MTKLSILAILSLAFIGVTRLAQFVLSVFVIVFFGFTTFELIRTFRQPAKRQYAA
Ga0187865_12415742	3300018004	Peatland	MTKLSILAILSLLFVGVTRIAQFVMALFVIVFFGFTTFELIRTFRQPAKRQYAA
Ga0187884_103791191	3300018009	Peatland	EAHHVGIEGSCMTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFRQPAKRQYAA
Ga0187884_104360231	3300018009	Peatland	MTKLSILAILSLLFIGVTRIAQFVMALFVIVFFGFTTFELIRT
Ga0187873_13481861	3300018013	Peatland	EGSCMTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFRQPARRQQAA
Ga0187880_10490106	3300018016	Peatland	SLAFIGVTRLAQFVLSVFVIVFFGFTTFELIRTFRQPAKRQYAA
Ga0187872_100341146	3300018017	Peatland	MTNLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFRQPAKRQYAA
Ga0187881_101147541	3300018024	Peatland	MTKLSILAIFSLAFIGVTRLAQFVLSVFVIVFFGFT
Ga0187875_107282412	3300018035	Peatland	MTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFKQSAKSQYAA
Ga0187883_101567032	3300018037	Peatland	MTKLSILAILSLLFIGVTRIAQFVMAMFVIVFFGFTTFELIRTFRQPARRQQAA
Ga0187855_100418337	3300018038	Peatland	MTKLSILAILSLLFIGVTRIAQFVMALFVIVFFGFTTFELIRTLRQPAK
Ga0187871_106651503	3300018042	Peatland	MTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTT
Ga0187851_100237091	3300018046	Peatland	MTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFRQPAK
Ga0187851_103535351	3300018046	Peatland	MTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFKQSAKSQYA
Ga0187859_100310377	3300018047	Peatland	LAILSLLFIGVTRIAQFVMALFVIVFFGFTTFELIRTFRQPARRQQAA
Ga0187859_106613331	3300018047	Peatland	MTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFT
Ga0187858_101667994	3300018057	Peatland	TKLSILAILSLLFIGVTRIAQFVMALFVIVFFGFTTFELIRTFRQPAKRQYAA
Ga0224534_100187112	3300022524	Soil	MTKLSLVAILSLVFFGVTRVAHFVLSLFIILLFGITIFELIRTFRQLAKRQYAA
Ga0212088_102439161	3300022555	Freshwater Lake Hypolimnion	MTKLSILAILSLAFIGVTRLAQFVLSMFVIVFFGFTTFELIRTFRQPAKRQYAA
Ga0224518_10159943	3300022824	Soil	IGVTRIAQFVMALFVIVFFGFTTFELIRTFRQPARRQQAA
Ga0224531_10030079	3300022849	Soil	MTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFRQPARRQQAA
Ga0224553_10480801	3300022875	Soil	LAILSLLFIGVTRIAQFVMALFVIVFFGFTTFELIRTFRQPAKRQYAA
Ga0224554_10254354	3300023068	Soil	MTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFRQPAKKQYAA
Ga0224554_10496341	3300023068	Soil	GVTRIAQFVMALFVIVFFGFTTFELIRTLRQPARRQQAA
Ga0224557_10809154	3300023101	Soil	MTKLSILAILSLAFIGVTRIAQFVMALFVIVFFGFTTFELIRTLRQPARRQQAA
Ga0208562_11123172	3300025460	Peatland	MTKLSILAILSLLFIGVTRIAQFVMALFVIVFFGFTTFELIRTLRKPARRQQAA
Ga0255351_10404953	3300026456	Soil	MIKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFRQPAKRQYAA
Ga0255351_10705263	3300026456	Soil	FNCSQKRGSMTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFRQPAKRQYAA
Ga0255350_10210221	3300026502	Soil	MTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTF
Ga0209517_100911866	3300027854	Peatlands Soil	MTKLSILAILSLLFIGVTRIAQFVMALFVIVFFGFTTFELIRTFRQPARR
Ga0209517_101578001	3300027854	Peatlands Soil	SLLFIGVTRIAQFVMALFVIVFFGFTTFELIRTFRQPARRQQAA
Ga0209415_106436471	3300027905	Peatlands Soil	ILSLLFIGVTRIAQFVMALFVIVFFGFTTFELIRTFRQPARRQQAA
Ga0255353_10191033	3300028070	Soil	MTKLSLIAILALIFFGVTRFAQFILALFVIVFFGVTTYELLRALIQPAKQQYAA
Ga0255349_10294465	3300028090	Soil	MIKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTF
Ga0255349_10828553	3300028090	Soil	KLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFRQPAKRQYAA
Ga0255348_10171484	3300028268	Soil	VTRLAQFVLSLFVIVFFGFTTFELIRTFRQPAKRQYAA
Ga0302149_10155831	3300028552	Bog	MTKLSILAILSLLFIGVTRIAQFVMTLFVIVFFGFTTFEL
Ga0302202_101246334	3300028762	Bog	MTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRT
Ga0302202_101330954	3300028762	Bog	LAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFKQPAKRQYAA
Ga0302202_103104233	3300028762	Bog	MTKLTILAILSLVFIGVTRLAQFILSLFVIVFFGVTTIELIRTFRQPAKRQYAE
Ga0302269_11364993	3300028766	Bog	MSKLTILAILSLVFIGVTRLAQFVLSLFVIVFFGFTTFELIRTLRQPAKRQYAE
Ga0302266_101989083	3300028779	Bog	AERNRMTKLTILAILSLVFIGVTRLAHFVLSLFVIVFFGFTTIELIRTFRQPAKRQYAE
Ga0302189_102056984	3300028788	Bog	IGVTRLAQFILSLFVIVFFGVTTIELIRTFRQPAKRQYAE
Ga0302157_102394614	3300028813	Bog	RMTKLSILAILSLLFIGVTRIAQFVMALFVIVFFGFTTFELIRTFRQPARRQQAA
Ga0302200_101437201	3300028909	Bog	MSKLTILAILSLVFIGVTRLAQFVLSLFVIVFFGFTPFELIRTLRQPAKRQYAE
Ga0311327_105871103	3300029883	Bog	MTKLSILAILSLVFIGVTRIAQFVMALFVIVFFGFTTFELIRTFRQPAKRQYAA
Ga0311341_101342064	3300029908	Bog	MTKLTILAILSLVFIGVTRLAHFVLSLFVIVFFGFTTIELIRTFRQP
Ga0311359_104678131	3300029914	Bog	RMTKLTILAILSLVFIGVTRLAHFVLSLFVIVFFGFTTIELIRTFRQPAKRQYAE
Ga0311358_102701824	3300029915	Bog	MTKLTILAILSLVFIGVTRLAHFVLSLFVIVFFGFTTIELI
Ga0311358_105004821	3300029915	Bog	ETHHVRIEGSCMTKLTILAILSLVFIGVTRLAQFILSLFVIVFFGVTTIELIRTFRQPAKRQYAE
Ga0302148_12216781	3300029916	Bog	IGVTRLAQFVLSLFVIVFFGFTPFELIRTLRQPAKRQYAE
Ga0302141_10436233	3300029919	Bog	MTKLSILAILSLLFIGVTRIAQFVMALFVIVFFGFTTFELIRTFRQPAKRQYAE
Ga0302150_101916262	3300029956	Bog	MTKLSILAILSLLFIGVTRIAQFVMALFVIVFFGFTTFELIRTFRQPARRQQA
Ga0302280_12412801	3300029985	Fen	GVTRIAQFVMALFVIVFFGFTTFELIRTFRQPARRQQAA
Ga0302190_100754001	3300029988	Bog	MTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFRQPAKR
Ga0302190_103436103	3300029988	Bog	LAQFVLSLFVIVFFGFTTFELIRTFRQPAKRQYAA
Ga0302270_105445673	3300030011	Bog	SLVFIGVTRIAQFVMALFVIVFFGFTTFELIRTFRQPAKRQYAA
Ga0302195_104344891	3300030051	Bog	MTKLTILAILSLVFIGVTRLAQFILSLFVIVFFGVTTIEL
Ga0302187_102626164	3300031259	Bog	RIEGSCMTKLTILAILSLVFIGVTRLAQFILSLFVIVFFGVTTIELIRTFRQPAKRQYAE
Ga0302320_109142884	3300031524	Bog	MSKLTILAILSLVFIGVTRLAQFVLSLFVIVFFGFTTFELIRT
Ga0302320_118869172	3300031524	Bog	MTKLSIFAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFKQPAKRQYAA
Ga0307377_1000091028	3300031673	Soil	MTKLSILAILSLTFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFKQPAKRQYAA
Ga0316219_13228651	3300031759	Freshwater	IGVTRLAQFVLSLFVIVFFGFTTFELIRTFRQPAKRQYAA
Ga0311301_107204401	3300032160	Peatlands Soil	MTKLSILAILSLLFIGVTRIAQFVMALFVIVFFGFTTFELIRTF
Ga0326727_1005921613	3300033405	Peat Soil	MTKLSILAILSLLFIGVTRIAQFVMALFVIVFFGFTTFELI
Ga0334804_032412_1109_1273	3300033818	Soil	MTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTLRQPARRQQAA
Ga0334828_104351_1_126	3300033822	Soil	MTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIR
Ga0371487_0469817_393_533	3300033982	Peat Soil	MTKLSILAILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFRQP
Ga0326724_0242583_893_1036	3300034091	Peat Soil	AILSLAFIGVTRLAQFVLSLFVIVFFGFTTFELIRTFRQPAKRQYAA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100248

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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