NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F100380

Metagenome Family F100380

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F100380
Family Type Metagenome
Number of Sequences 102
Average Sequence Length 39 residues
Representative Sequence MEYEVEGPRPRGRPKRTWREVVREDCQARKLNKEDAMDR
Number of Associated Samples 21
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 17.65 %
% of genes near scaffold ends (potentially truncated) 49.02 %
% of genes from short scaffolds (< 2000 bps) 43.14 %
Associated GOLD sequencing projects 17
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (71.569 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms
(67.647 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(100.000 % of family members)



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Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
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IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60
1Ga0056133_100465872
2Ga0056133_101400613
3Ga0056133_104660761
4Ga0056134_100298301
5Ga0056134_100927632
6Ga0056134_101289101
7Ga0056126_100045663
8Ga0056126_100310673
9Ga0056126_100746733
10Ga0056126_100775643
11Ga0056126_100939832
12Ga0056126_101522502
13Ga0056109_10702001
14Ga0056108_12783541
15Ga0056108_14796971
16Ga0056108_14925811
17Ga0126333_10329541
18Ga0126333_10453191
19Ga0126333_11558271
20Ga0126333_11626401
21Ga0126333_11778182
22Ga0126333_12022871
23Ga0126333_12053052
24Ga0126333_12575302
25Ga0126333_12816471
26Ga0126333_13384221
27Ga0126333_13731183
28Ga0126326_10708132
29Ga0126326_11436961
30Ga0126326_12220402
31Ga0126332_100424504
32Ga0126332_100489331
33Ga0126332_100746721
34Ga0126332_100889201
35Ga0126332_101636702
36Ga0126332_101714201
37Ga0126332_101975361
38Ga0126332_103273291
39Ga0126332_103291811
40Ga0126332_104093401
41Ga0126334_100748664
42Ga0126334_100887933
43Ga0126334_101340301
44Ga0126334_101432043
45Ga0126334_101668482
46Ga0126334_101678161
47Ga0126334_101817301
48Ga0126334_102832473
49Ga0126325_100370011
50Ga0126325_100392254
51Ga0126325_100474931
52Ga0126325_101433331
53Ga0126325_101524242
54Ga0126325_101554021
55Ga0126331_10252552
56Ga0126331_11379501
57Ga0126331_11761303
58Ga0126331_12414631
59Ga0136654_10237191
60Ga0136654_11278451
61Ga0136654_11396431
62Ga0136654_12352402
63Ga0136654_12752001
64Ga0136654_12833611
65Ga0136654_13072091
66Ga0126328_102859872
67Ga0126328_103824161
68Ga0126327_100485453
69Ga0126327_100663311
70Ga0126327_101728832
71Ga0126327_103149571
72Ga0126329_100048541
73Ga0126329_100413091
74Ga0126329_101017731
75Ga0126329_101140401
76Ga0126329_101514631
77Ga0126329_101651041
78Ga0126329_101951971
79Ga0126329_102080591
80Ga0126329_102889062
81Ga0126329_103034781
82Ga0126329_103395621
83Ga0126329_103745171
84Ga0126329_103963451
85Ga0126329_104414431
86Ga0209785_10057212
87Ga0209785_10258951
88Ga0209144_10549831
89Ga0209458_10036302
90Ga0209458_10664153
91Ga0209458_10709462
92Ga0209458_12700591
93Ga0209789_100672541
94Ga0209789_100846202
95Ga0209789_100895861
96Ga0209789_101360251
97Ga0209259_11201061
98Ga0209259_11480441
99Ga0209259_11773262
100Ga0209259_13351721
101Ga0209459_101931702
102Ga0209459_102048101
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 29.85%    β-sheet: 0.00%    Coil/Unstructured: 70.15%
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Variant

5101520253035MEYEVEGPRPRGRPKRTWREVVREDCQARKLNKEDAMDRSequenceα-helicesβ-strandsCoilSS Conf. score
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Predicted 3D Structure

Structure Viewer

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Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



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Phylogeny

NCBI Taxonomy

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Visualization
All Organisms
Unclassified
28.4%71.6%
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Associated Scaffolds





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Environmental Properties

Associated Habitat Types

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Visualization
Marine Gutless Worms Symbiont
Marine Gutless Worms Symbiont
Marine Gutless Worms
31.4%67.6%
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Associated Samples


Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0056133_1004658723300005653Marine Gutless Worms SymbiontMEYEVEGCRPRGRPKRTWRELVQKDCQAHNLNREDAMDRGG*
Ga0056133_1014006133300005653Marine Gutless Worms SymbiontEEGSRPRGRPKRTWREVEHKDCQARNLNREDAIDRSR*
Ga0056133_1046607613300005653Marine Gutless Worms SymbiontVEGSRPRGRPKTTWTEVVQKDCQARHLNKEDAMDRGRWKK
Ga0056134_1002983013300005970Marine Gutless Worms SymbiontMEYEVDGSRPRGRPKRTWKEVVQKYCQAHNLNKEDAMD
Ga0056134_1009276323300005970Marine Gutless Worms SymbiontVEGSRPRGRPKRRWKEVMQKDCQACNLNREDVMDR
Ga0056134_1012891013300005970Marine Gutless Worms SymbiontMEYEVEGSRPRGRPKRTWREVVQKDCQAHNLNKED
Ga0056126_1000456633300005984Marine Gutless Worms SymbiontVEGARPRGRSVSTWREVVRKDTQDKLNREGAMDHRR*
Ga0056126_1003106733300005984Marine Gutless Worms SymbiontMEYEVQGVRSRGRPKKTYRETVEKDHQARKLNTENAMDRNR*
Ga0056126_1007467333300005984Marine Gutless Worms SymbiontLGEQEGAKQRNRPKGTWREVVQKHCQARKLNTEDAMDHSR
Ga0056126_1007756433300005984Marine Gutless Worms SymbiontMEYEVEGARPRDRPKRTWREVVQKDCQTRKLNREDAMDGVVDGGS*
Ga0056126_1009398323300005984Marine Gutless Worms SymbiontMEYEKEGSIPRDIPKRTWREVVQKDCQACKLNREDVMDCSR*
Ga0056126_1015225023300005984Marine Gutless Worms SymbiontMEYEVDGSRPRGRPKRTWREVVQKDCQARKLNREDAIDLADGGS*
Ga0056109_107020013300007818Marine Gutless Worms SymbiontMEYEADGSRPRGRPKRTWREVVQKDCQARNLNREDA
Ga0056108_127835413300008215Marine Gutless Worms SymbiontMEYEVEGFRPRGRPKRTWREVVQKDCQACNLNREDAIH
Ga0056108_147969713300008215Marine Gutless Worms SymbiontMEYEVKGSKPRGRPKRTWREVVQKDCQARSLNREDAVDRSR*
Ga0056108_149258113300008215Marine Gutless Worms SymbiontMEYEVDGSRPRGSPKRTWREVVQKDCQACNLNREDAMD
Ga0126333_103295413300010290Marine Gutless WormsMEYEVEGSRPRERPRRTWREVVQKDSQAHKLNKEDAIEGGS*
Ga0126333_104531913300010290Marine Gutless WormsEYVEGPRPRGRPKRTWREVVREDCQACKLNTEDAMEEG*
Ga0126333_115582713300010290Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVKEDCQARKLITEDA
Ga0126333_116264013300010290Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVEKDCQARKLNKEDAVDRN
Ga0126333_117781823300010290Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVREDCQARKLNKEDAMDHCK
Ga0126333_120228713300010290Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVREDCQARKLNKEDAMDRCK
Ga0126333_120530523300010290Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVREDCQARKKNKED
Ga0126333_125753023300010290Marine Gutless WormsMEYEVKGPRPRGRPKRTWREVVKEDCQARKLNKEDAMDR
Ga0126333_128164713300010290Marine Gutless WormsMEYEAEGPRPRGRPKRTWREVVKEDCQARKLNKEDAMDR
Ga0126333_133842213300010290Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVREDCQARKLNKEDA
Ga0126333_137311833300010290Marine Gutless WormsMEYEADGSRPRGRPKRTWKEVVREDCQARKLNKEDAVDRC
Ga0126326_107081323300010292Marine Gutless WormsVKKCMEYEVEGPRPRGRPKRTWREVVREDCQARKMNRQDR*
Ga0126326_114369613300010292Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVKEDCQARKLNTEDAMD
Ga0126326_122204023300010292Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVREDCQARKLNKEDAMDRC
Ga0126332_1004245043300010294Marine Gutless WormsMEYEVEGSRPRERPRRTWREVVQKDNQAHKLNKEDAIEGGS*
Ga0126332_1004893313300010294Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVREDCQARKLNKEDAMDR
Ga0126332_1007467213300010294Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVKEDCQARKLNTEYAM
Ga0126332_1008892013300010294Marine Gutless WormsEYEVEGPRPRGRPKRTWREVVREDCQARKLNKEDAMDRCK*
Ga0126332_1016367023300010294Marine Gutless WormsEGPRPRGRLKRTWREVVREDCQARKMNKEDAVDRCKWR*
Ga0126332_1017142013300010294Marine Gutless WormsMEYEVQGPRPRGRPKRTWREVVREDCQARKMNKEDA
Ga0126332_1019753613300010294Marine Gutless WormsEVEGPRPRGRPKRTWREVVREDCQARKLNKEDAMDRCKWR*
Ga0126332_1032732913300010294Marine Gutless WormsMRVEYEVEGPRPREKLKRTWREVVEKDCQARRLNKE
Ga0126332_1032918113300010294Marine Gutless WormsMEYEVEGPRPRGRAKRTWREVVEKDCQARKLNKEDATDHS
Ga0126332_1040934013300010294Marine Gutless WormsVKKFVEYEVKGPRPRGRPKRTWREVVEKDCQACKLNKED
Ga0126334_1007486643300010295Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVREDCQARKLNTEDAMD
Ga0126334_1008879333300010295Marine Gutless WormsMEYEVEGLRPRGRPKRTWREVVKEDCQARKLNTEDAVD
Ga0126334_1013403013300010295Marine Gutless WormsVYEVEGPRPRGRPKRTWREVVERDCQAHKLYEEDAIDRSR
Ga0126334_1014320433300010295Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVREDCQARKLNKEDAVDRCK
Ga0126334_1016684823300010295Marine Gutless WormsMEYEVEGPKPRGRPKRTWREVVQENCQARKLNKEDA
Ga0126334_1016781613300010295Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVEKDCQARKLNKENNV
Ga0126334_1018173013300010295Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVKEDCQARKLNTEDAM
Ga0126334_1028324733300010295Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVKEDCQARKLNTED
Ga0126325_1003700113300010298Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVKEDCQARKLNTEDA
Ga0126325_1003922543300010298Marine Gutless WormsMEYEVEGPKPRGRPKRTWREVVKEDCQARKLNTEDAMDHSK
Ga0126325_1004749313300010298Marine Gutless WormsKCMEYEVEGPRPRGRPKRTWRKVVREDCQARKLNKEDAMDR*
Ga0126325_1014333313300010298Marine Gutless WormsVKKCMEYEVDGSRPRGRPKRTWKEVVREDCQARKLNKEDAVNRCKW*
Ga0126325_1015242423300010298Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVKEDCQARKLNTEDAMDRSK
Ga0126325_1015540213300010298Marine Gutless WormsMEYEVEGPKPRGRPKRTWREVVKEDCQARKLNTEDAMDHSK*
Ga0126331_102525523300010314Marine Gutless WormsMKKCMEYEVEGSRPRERPRRTWREVVQKDSQAHKLNKEDAIEGGS*
Ga0126331_113795013300010314Marine Gutless WormsMEYDVEGPRPRGRPKRTWKEVLEKDCQARKLNKEDAIEMVKDV*
Ga0126331_117613033300010314Marine Gutless WormsCMVYEVDCPRPRGRPKRTWREVVEKDCQARKLNTEDAVDRS*
Ga0126331_124146313300010314Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVREDCQARKLNREDA
Ga0136654_102371913300010315Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVKENCQARKLNTED
Ga0136654_112784513300010315Marine Gutless WormsMQVGEYEVAGPRPRGRPKRTWREVVKEDCQARKLNK
Ga0136654_113964313300010315Marine Gutless WormsMEYEVKGPRPRGRPKRTWREVVKEDCQARKLNKEDAMD
Ga0136654_123524023300010315Marine Gutless WormsMEYKVGLEGPRPRGRPKRTWREVVEKDCQARKLNK
Ga0136654_127520013300010315Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVREDCQARKLNKEDAM
Ga0136654_128336113300010315Marine Gutless WormsKCMEYEVEGPRPRGRPKRTWREVVKEDSLARKLNKEDATDRSK*
Ga0136654_130720913300010315Marine Gutless WormsMQDRKKCMEYEVEGPRPRERPKRTWREVVKEDCQARKLNTEV
Ga0126328_1028598723300010377Marine Gutless WormsEYEVEGPRPRGRPKRTWREVVREDCQARKMNKEDAVDRCK*
Ga0126328_1038241613300010377Marine Gutless WormsMDLEYEVEGSRLRGRLKRTWREVVEKNYQACKLNKEDA
Ga0126327_1004854533300011190Marine Gutless WormsMEYEVKGPRPRGRPKRTWREVVEKDCQARKLNKEDAVD
Ga0126327_1006633113300011190Marine Gutless WormsMEYEAEGPRPCGRPKRTWREVVREDCQARKMNKEDAV
Ga0126327_1017288323300011190Marine Gutless WormsVKKCIEYEVEGATPRGRPKRTWREVVREDCQARKLNTED
Ga0126327_1031495713300011190Marine Gutless WormsWVKKCMEYEVEGPRPKGRPKRTWREVVKENCQKRKLNTEDAMDRR*
Ga0126329_1000485413300012273Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVKEDCQARKLNTEDTMDRCK
Ga0126329_1004130913300012273Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVEKDCQARKLNKEDAMD
Ga0126329_1010177313300012273Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVREDCQARKLNKED
Ga0126329_1011404013300012273Marine Gutless WormsCMEYEVEGPRPRGRPKRTWREVVREDCQARKLNKEDAMDRFK*
Ga0126329_1015146313300012273Marine Gutless WormsCMEYEVEGPKPRGRPKRTWREVVKEDCQARKLNTEDAMDHSK*
Ga0126329_1016510413300012273Marine Gutless WormsVEYEVEGPRPRGRLKRTWREVVREDCQARKMNKEDAIDRF*
Ga0126329_1019519713300012273Marine Gutless WormsMEHEVEGSRPRGRPKKTWKEVVREDCQARKLILTNDLD
Ga0126329_1020805913300012273Marine Gutless WormsMEYEVEGPRPRERPKRTWREVVKEDCQARKLNKDDATDHSK
Ga0126329_1028890623300012273Marine Gutless WormsEVEGPRPRGRPKRTWREVVEKDREARKLNKEDAMDRSR*
Ga0126329_1030347813300012273Marine Gutless WormsMVYEVEGPRPRGRPKRTWREVVREDCQARKLNKEDAVD
Ga0126329_1033956213300012273Marine Gutless WormsMEYEVQGPRPRGRPKRTWREVVREDCQARKLNKEDAMDRCK
Ga0126329_1037451713300012273Marine Gutless WormsEYEVEGPRPRERQKRTWRAVAEKDCRVRKLNKEDAMDCNRWR*
Ga0126329_1039634513300012273Marine Gutless WormsMKYEVEGPRPRGRPKRTWREVVREDCQARKMNKED
Ga0126329_1044144313300012273Marine Gutless WormsMEYEVEGPRPRGRPKRTWREVVKEDCQACKLNTEVAMD
Ga0209785_100572123300027044Marine Gutless Worms SymbiontSKARGRPKRTWREVVQKDCQARNLNRDDAMDRGNGRS
Ga0209785_102589513300027044Marine Gutless Worms SymbiontMEYEADGSRPRGRPKRTWREVVQKDCQARNLNREDAVDRGR
Ga0209144_105498313300027267Marine Gutless Worms SymbiontLNKRMEIEAEGCRPRCIPRRTWREVVQNDCQARKLSREDAVN
Ga0209458_100363023300027549Marine Gutless Worms SymbiontVEGARPRGRSVSTWREVVRKDTQDKLNREGAMDHRR
Ga0209458_106641533300027549Marine Gutless Worms SymbiontEYEVQGVRSRGRPKKTYRETVEKDHQARKLNTENAMDRNR
Ga0209458_107094623300027549Marine Gutless Worms SymbiontMEYEVEGARPRDRPKRTWREVVQKDCQTRKLNREDAMDGVVDGGS
Ga0209458_127005913300027549Marine Gutless Worms SymbiontVKKCMEYEVEGFQPRGRPKRTWREVVQKDCQACKLNREDAI
Ga0209789_1006725413300027624Marine Gutless Worms SymbiontVEGSRPRGRPKTTWREVVQKDCQARNLNREDAVDR
Ga0209789_1008462023300027624Marine Gutless Worms SymbiontMEYEVDGSRPRGRPKRTWKEVVQKDCQARNLNNEDAMDR
Ga0209789_1008958613300027624Marine Gutless Worms SymbiontMEYEVEGSRPRGRPKRTWKEDVQKDCQARNLNREDAM
Ga0209789_1013602513300027624Marine Gutless Worms SymbiontMEYEADSSKPRGRPKRTWREVVQKGCQARNLNREDAMDRGR
Ga0209259_112010613300027658Marine Gutless Worms SymbiontMEYEVEGSTPRGRPKRTWREVVQKDCQARNLNMEDAVDSGTVDGRS
Ga0209259_114804413300027658Marine Gutless Worms SymbiontVDGSRPRGRPKRTWREVVQKDCQARNLNREDAVDR
Ga0209259_117732623300027658Marine Gutless Worms SymbiontMEYEVEGSRPRGRPKRTWREVVQKDGQARNLNKEDAMDCGR
Ga0209259_133517213300027658Marine Gutless Worms SymbiontMEYEVEGSRPRGRPKRTWREVVQKDCQAHNLNKEDAMDCGRW
Ga0209459_1019317023300027661Marine Gutless Worms SymbiontMEYEVDGSRPRGRPKRTWTEVVQKDCQACNLNREDAMDRG
Ga0209459_1020481013300027661Marine Gutless Worms SymbiontMEYEADSSKPRGRPKRTWREVVQKGCQARNLNREDAMDRG


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