Metagenome / Metatranscriptome Family F100515

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100515
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	79 residues
Representative Sequence	MEPGIIGVIGLLFGSVIAWLALRSRTATLSARLSLMEKELAAGKADLARLQQAHTELVAGKARAESALESERKT
Number of Associated Samples	91
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.04 %
% of genes near scaffold ends (potentially truncated)	98.04 %
% of genes from short scaffolds (< 2000 bps)	93.14 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.961 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (10.784 % of family members)
Environment Ontology (ENVO)	Unclassified (27.451 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.902 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 69.61% β-sheet: 0.00% Coil/Unstructured: 30.39%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00188	CAP	45.10
PF01381	HTH_3	2.94
PF01904	DUF72	2.94
PF14534	DUF4440	1.96
PF07963	N_methyl	0.98
PF13690	CheX	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	45.10
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	2.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.96 %
Unclassified	root	N/A	48.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.96 %
Unclassified	root	N/A	48.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.96 %
Unclassified	root	N/A	48.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.04 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	35.29 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.04 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	27.45 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.88 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.04 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.45 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.88 %
Candidatus Brocadiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia	1.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.04 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.45 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.88 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	1.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.04 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.45 %
Candidatus Brocadiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae	1.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.96 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.98 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.04 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.45 %
Candidatus Brocadia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Brocadia	1.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.96 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.98 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.04 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.45 %
Candidatus Brocadia sinica	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Brocadia → Candidatus Brocadia sinica	1.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.96 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.98 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100871689	Not Available	782	Open in IMG/M
3300003368\|JGI26340J50214_10130903	Not Available	633	Open in IMG/M
3300004082\|Ga0062384_100325286	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300004091\|Ga0062387_100580964	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300004092\|Ga0062389_101120366	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300004092\|Ga0062389_104070114	All Organisms → cellular organisms → Bacteria → Proteobacteria	549	Open in IMG/M
3300004635\|Ga0062388_101947207	Not Available	606	Open in IMG/M
3300005591\|Ga0070761_10631743	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300005602\|Ga0070762_11024942	Not Available	566	Open in IMG/M
3300005610\|Ga0070763_10640663	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300005610\|Ga0070763_10736828	Not Available	579	Open in IMG/M
3300005921\|Ga0070766_10845482	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300006893\|Ga0073928_10267798	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300007258\|Ga0099793_10636277	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Brocadia → Candidatus Brocadia sinica	536	Open in IMG/M
3300007982\|Ga0102924_1371349	Not Available	547	Open in IMG/M
3300009523\|Ga0116221_1308158	Not Available	685	Open in IMG/M
3300009525\|Ga0116220_10053645	All Organisms → cellular organisms → Bacteria → Proteobacteria	1683	Open in IMG/M
3300009552\|Ga0116138_1121523	Not Available	722	Open in IMG/M
3300009618\|Ga0116127_1087944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	830	Open in IMG/M
3300009632\|Ga0116102_1010390	All Organisms → cellular organisms → Bacteria	3412	Open in IMG/M
3300009645\|Ga0116106_1085530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1026	Open in IMG/M
3300009665\|Ga0116135_1111985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	995	Open in IMG/M
3300009709\|Ga0116227_10570107	Not Available	858	Open in IMG/M
3300009764\|Ga0116134_1078789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1214	Open in IMG/M
3300010159\|Ga0099796_10228634	Not Available	765	Open in IMG/M
3300010341\|Ga0074045_10817489	Not Available	589	Open in IMG/M
3300010361\|Ga0126378_11425890	Not Available	784	Open in IMG/M
3300011120\|Ga0150983_11135566	Not Available	735	Open in IMG/M
3300012096\|Ga0137389_11038538	Not Available	702	Open in IMG/M
3300012189\|Ga0137388_10128073	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2221	Open in IMG/M
3300012203\|Ga0137399_11356618	Not Available	596	Open in IMG/M
3300012203\|Ga0137399_11393363	Not Available	587	Open in IMG/M
3300012203\|Ga0137399_11441792	Not Available	575	Open in IMG/M
3300012683\|Ga0137398_10613928	Not Available	753	Open in IMG/M
3300012918\|Ga0137396_10994474	Not Available	608	Open in IMG/M
3300014158\|Ga0181521_10117576	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1591	Open in IMG/M
3300014489\|Ga0182018_10041325	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2867	Open in IMG/M
3300014489\|Ga0182018_10118572	All Organisms → cellular organisms → Bacteria → Acidobacteria	1535	Open in IMG/M
3300014655\|Ga0181516_10343552	Not Available	760	Open in IMG/M
3300015264\|Ga0137403_11310703	Not Available	571	Open in IMG/M
3300017946\|Ga0187879_10133893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1408	Open in IMG/M
3300017946\|Ga0187879_10608311	Not Available	607	Open in IMG/M
3300017948\|Ga0187847_10228858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1012	Open in IMG/M
3300017948\|Ga0187847_10873968	Not Available	511	Open in IMG/M
3300018007\|Ga0187805_10360786	Not Available	672	Open in IMG/M
3300018014\|Ga0187860_1335344	Not Available	578	Open in IMG/M
3300018035\|Ga0187875_10112333	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1542	Open in IMG/M
3300018040\|Ga0187862_10237419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1177	Open in IMG/M
3300018047\|Ga0187859_10262379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	929	Open in IMG/M
3300018062\|Ga0187784_10068593	All Organisms → cellular organisms → Bacteria	2875	Open in IMG/M
3300018085\|Ga0187772_10177875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1420	Open in IMG/M
3300018085\|Ga0187772_10511192	All Organisms → cellular organisms → Bacteria → Acidobacteria	848	Open in IMG/M
3300018085\|Ga0187772_10969186	Not Available	620	Open in IMG/M
3300019786\|Ga0182025_1164055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1848	Open in IMG/M
3300020579\|Ga0210407_10273070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1319	Open in IMG/M
3300021046\|Ga0215015_11066095	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300021404\|Ga0210389_10386669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1100	Open in IMG/M
3300021405\|Ga0210387_11858511	Not Available	506	Open in IMG/M
3300021433\|Ga0210391_10135237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1941	Open in IMG/M
3300022509\|Ga0242649_1066998	Not Available	532	Open in IMG/M
3300022873\|Ga0224550_1024901	Not Available	847	Open in IMG/M
3300023250\|Ga0224544_1065742	Not Available	526	Open in IMG/M
3300025434\|Ga0208690_1025068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	995	Open in IMG/M
3300025612\|Ga0208691_1104145	Not Available	639	Open in IMG/M
3300026496\|Ga0257157_1055327	Not Available	670	Open in IMG/M
3300027545\|Ga0209008_1004656	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3253	Open in IMG/M
3300027568\|Ga0208042_1044392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1139	Open in IMG/M
3300027609\|Ga0209221_1023778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1627	Open in IMG/M
3300027648\|Ga0209420_1182467	Not Available	564	Open in IMG/M
3300027660\|Ga0209736_1009203	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3185	Open in IMG/M
3300027667\|Ga0209009_1135955	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300027676\|Ga0209333_1123015	Not Available	702	Open in IMG/M
3300027768\|Ga0209772_10240054	Not Available	575	Open in IMG/M
3300027795\|Ga0209139_10331879	Not Available	533	Open in IMG/M
3300027853\|Ga0209274_10428793	Not Available	683	Open in IMG/M
3300027855\|Ga0209693_10129263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1249	Open in IMG/M
3300027895\|Ga0209624_11057287	Not Available	524	Open in IMG/M
3300027903\|Ga0209488_10281335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1244	Open in IMG/M
3300028016\|Ga0265354_1014060	Not Available	758	Open in IMG/M
3300028020\|Ga0265351_1027508	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Brocadia → Candidatus Brocadia sinica	509	Open in IMG/M
3300028747\|Ga0302219_10135084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300028747\|Ga0302219_10336834	Not Available	588	Open in IMG/M
3300028776\|Ga0302303_10107153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1019	Open in IMG/M
3300028798\|Ga0302222_10155474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300028863\|Ga0302218_10138835	Not Available	768	Open in IMG/M
3300028873\|Ga0302197_10405928	Not Available	602	Open in IMG/M
3300028906\|Ga0308309_11596922	Not Available	555	Open in IMG/M
3300029914\|Ga0311359_11068697	Not Available	538	Open in IMG/M
3300030020\|Ga0311344_10364136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1350	Open in IMG/M
3300030054\|Ga0302182_10119492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1151	Open in IMG/M
3300030490\|Ga0302184_10252093	Not Available	722	Open in IMG/M
3300030740\|Ga0265460_11146728	Not Available	738	Open in IMG/M
3300030746\|Ga0302312_10210108	Not Available	747	Open in IMG/M
3300030940\|Ga0265740_1046976	Not Available	523	Open in IMG/M
3300031525\|Ga0302326_11506975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300031708\|Ga0310686_114663057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1000	Open in IMG/M
3300031718\|Ga0307474_10195310	All Organisms → cellular organisms → Bacteria	1539	Open in IMG/M
3300031718\|Ga0307474_10298917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1240	Open in IMG/M
3300031753\|Ga0307477_10211750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1347	Open in IMG/M
3300031837\|Ga0302315_10711725	Not Available	526	Open in IMG/M
3300032205\|Ga0307472_100569398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	993	Open in IMG/M
3300033402\|Ga0326728_10126972	All Organisms → cellular organisms → Bacteria	2897	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.04%
Host-Associated	Host-Associated	1.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.61%
Aquatic	Environmental → Aquatic	28.43%
Plants	Host-Associated → Plants	1.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.92%
Freshwater	Environmental → Aquatic → Freshwater	26.47%
Peat	Environmental → Terrestrial → Peat	15.69%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.98%
Peat Moss	Host-Associated → Plants → Peat Moss	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	26.47%
Loam	Environmental → Terrestrial → Soil → Loam	16.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.84%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.63%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	17.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.78%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.94%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.96%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.78%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	9.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.82%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	7.84%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.84%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	7.84%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.92%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.94%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.96%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.96%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.96%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.98%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.98%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.98%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.98%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300025434	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300028020	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE4	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028776	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_1	Environmental	Open in IMG/M
3300030940	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1008716892	3300002245	Forest Soil	MEPVVVGVIGLLFGSVIAALVLRSRSAGTSARLSLREKELEAEKASLARLQQAYTEVVAGKARVESALESERKTSNEKIELVTRASEELRNAFKAMA
JGI26340J50214_101309031	3300003368	Bog Forest Soil	MEPGVVGVIGLLFGSLIAWLALRSRTAGLNARLSLMEKELASEKAGLARLQQAHTELVAGKARAESALEVERKTSNE
Ga0062384_1003252861	3300004082	Bog Forest Soil	MEPAVIGIIGLLLGSLMAWLGLRSRHAGLSARVSLMEKELAAEKASLARLQQVYTEVIAGKARLESALESERKTSNEKIEFL
Ga0062387_1005809642	3300004091	Bog Forest Soil	MIGLFLGGVLAWLVLRSRTATLSARLSLMEKELEAGKADLARLRHAHTELVAGKARLESALESERKINAEKM
Ga0062389_1011203662	3300004092	Bog Forest Soil	MGPAVIGIIGVLLGSLLAWLGLRSRHAGLSARVALMEKELAAEKASLARLQQGYTEAVAGKARLESALESERKTSNEKIA
Ga0062389_1040701141	3300004092	Bog Forest Soil	MEPWIAGVIGVLLGSALAWLVLRSRTATLSARSSLMEKELAAGKADLARLQQAHTDLVAGKARL
Ga0062388_1019472071	3300004635	Bog Forest Soil	MEPAVVVIGSIGLLLGGLIAWLGLRSRQAGLSARVSLMEKELADEKASLARLQQVYTEAVAGKARTESALESERKTSNEKIEFLTKAGERA
Ga0070761_106317431	3300005591	Soil	MGLETSIGIGLSFGALFGGLLAWLALRSPTAALNARLSLMEKELAAGTADFKRLQEAHELLVASKARLESALESERKTSNEKI
Ga0070762_110249421	3300005602	Soil	MELWITGVIGLLFGSVLAWLVLRSRTATLSARLSLMEKELEAGGADLERLQKAHTELVAGKARLESDLASERR
Ga0070763_106406632	3300005610	Soil	MGLATSIGIGLLFGALFGGFLAWLALRSRTAALNARLSLMEKELAAGKADFKRLQEAHELLVASKARLESALESERKTS
Ga0070763_107368282	3300005610	Soil	MEPGISGVIGLLFGCLIAWLVTRSRGGGLSIRLSLMEKELAAEKATLARFQQAYTELVAGKARLESALES
Ga0070766_108454822	3300005921	Soil	MELAVSGVIGLLFGSVIAWLGLRSRTAGLSARLTFTEKELAAEKARLARLQQDSTELLIGKARAESALQAERK
Ga0073928_102677982	3300006893	Iron-Sulfur Acid Spring	MGLGTSIGIGLLFGGLLAWLVLRSRTVALSARLSLMEKELAAGKADFKRFQEAHELLVASKARLESALDSERKTSNEK
Ga0099793_106362771	3300007258	Vadose Zone Soil	MELTTSVALGLLFGSVIAWLALRSSSAALRSRLSLTEKELATSRAELARLQAAHNELVAGKARAESALEAERRTSAEKIDLLNRAGEDLRNAFKAMAS
Ga0102924_13713491	3300007982	Iron-Sulfur Acid Spring	MEPSLMELWIAGIVGLLFGSALAWLVLRSRTATLSARLFLMEKELTAGKADLARLQQASTDLVAGKARLESDLASERKSSNEKIEFLTKAGE
Ga0116221_13081582	3300009523	Peatlands Soil	MELGVSAVIGLLFGSVIAWLVLRSRTAALSARLCLMEKELTAEKADLARLQQAHTELVAGKARA
Ga0116220_100536451	3300009525	Peatlands Soil	MEPGVVGVIGLLFGSLIAWLALRSRTAGLSARLSLMEKELAAEKASLARLQEAYTELVATRSKGEFTLESEQRTGPKKWN*
Ga0116138_11215232	3300009552	Peatland	MEPGVIGVIGLLFGSLLAWLALRSRTAGLNARLSLMEKELAAAEAQLARLQQAHTELVAGKARVESALEAERKTSNEK
Ga0116127_10879441	3300009618	Peatland	MGLGLSGAIGLLFGSVIAWLVLRSRTAGLNARLWLMEKELAAEKADLARLQQAHTDLVAGKARAESALESERKTS
Ga0116102_10103905	3300009632	Peatland	MGLGLSGVIGLLFGSVIAWLVLRSRTAGLNARLWLMEKELAAEKADLARLQQAHTDLVAGKARAESALESERKTS
Ga0116106_10855301	3300009645	Peatland	MEPGVIGVIGLLFGSLIAWLALRSRGAALSARLSLMEKELAAGKADLERLQRAHTELVAGKARAESALEAERKTSNEKIELVTRASEELRNAFKA
Ga0116135_11119852	3300009665	Peatland	MGPGTSIGIGLLFGGLLAWLALRSRTAALNARLSLMEKELAAGKADFRRLQEAHELLVASKARLEMALESERKTSNEKIELV
Ga0116227_105701071	3300009709	Host-Associated	MEPVATGVIGLLFGGVIAWLALRSRTAGLSARLSLTENELAAEKARLARLQQDSAELVAGRARAESALEAERKASDEKIELITH
Ga0116134_10787892	3300009764	Peatland	MEPSVIGVIGLLFGSLIAWLALRSRGAALSARLSLMEKELAAGKADLERLQRAHTELVAGKARAESALEAERKTSNEKI
Ga0099796_102286341	3300010159	Vadose Zone Soil	MEPGLIGVIGLLFGSVLAWLALRSRSAGMSARLSLREKELEAEKASLARLQQAHTELVAGKARLESALELERKASNEKI
Ga0074045_108174892	3300010341	Bog Forest Soil	MEPGVIGVIGLLFGGVLAWLALRSRTAALSARLSLMEKELAAGKADLARLQQAHTELVAGKARLESALESERKTNDEKMDLVTHASERASEDLRNAF
Ga0126378_114258902	3300010361	Tropical Forest Soil	MELVTSGVVGLLFGMLLAWLLLRSQQAASRIRLLLIEKELVAAKSELTRLFEAQNELIAAKARLESTLESERKTSNEKVELVRRASDELCNAF
Ga0150983_111355662	3300011120	Forest Soil	MELGVIGVIGLLFGSVIAWLVLRSRTATLTARLSLMEKELAAGKADLARLQQAQTELVAGKARLESALEGE
Ga0137389_110385382	3300012096	Vadose Zone Soil	MELTTSAVLGLLFGSMIAWLVLRSKAAVSNARLSLMEKELSGAKADLARLQQAHTELVAGKARVESALESERKTSNEKMEA
Ga0137388_101280731	3300012189	Vadose Zone Soil	MEPAVIGVIGLLFGSVIAWLALRSRTASLSARLSLMEKELAAGKADLARLQQAHTELVAGKARLESTLESERKTNNEKVELVTRA
Ga0137399_113566182	3300012203	Vadose Zone Soil	MELTTSVALGLLFGSVIAWLALRSSSAALRSRLSFTEKELATSRAELARLQGAHNELVAGKARAESALEAERKTSTEKIELLNRAGEDLRNAFKAMA
Ga0137399_113933632	3300012203	Vadose Zone Soil	MEPVVVGVIGLLFGSVLAWLALRSRSAGLSARLFLREKELEAEKASLARLQQAHTELVAGKARLESALESERKAN
Ga0137399_114417922	3300012203	Vadose Zone Soil	MELTTSVALGLLFGSVIAWLALRASSAALRSRLSLTEKELATSRAELARLQGAHNELVAGKARAESALEAERKTSTEKIELLNRAGEDLRNAFK
Ga0137398_106139281	3300012683	Vadose Zone Soil	MEPGLIGVIGLLFGSVLAWLALRSRSAGMSARLSLREKELEAEKASLARLQQAHTELVAGKARVESALESERKASNEKIELVTRASE
Ga0137396_109944742	3300012918	Vadose Zone Soil	MELMTSVALGLLFGSVIAWLALRSSSAALRSRLSFTEKELATSRAELARLQGAHNELVAGKARAESALEAERKTSTEKIELLNRAGEDLRN
Ga0181521_101175761	3300014158	Bog	MELGISAVLGLLFGGMIVWLALRSQKAALQASLSLVEKDLLTAKDDLARLQRAQTDLVAGKARLESALDAERKTSSEKIDLL
Ga0182018_100413253	3300014489	Palsa	MEPGVIGVVGLLFGSLIAWLGLRSRTATLNARLSLMEKELAVEKADLARLRQAYTEVVAGKARLESALESERKTSNEKVELVTRASEELR
Ga0182018_101185721	3300014489	Palsa	MEPGIIGVIGLLFGGVIAWLVLRSRTATLTERLSLIEKELAAGKADLARLQQAHTELVAGKARLESTLESE
Ga0181516_103435522	3300014655	Bog	MEPGVIGVIGLLFGSVIAWLALRSRTAGLSARLALMEKELTAEKADLARLQQASTELVAAKARLESTLQSERKT
Ga0137403_113107032	3300015264	Vadose Zone Soil	MEPGIIGVIGLLFGSVIAWLALRSRTATLSARLSLMEKELAAGKADLARLQQAHTELVAGKARAESALESERKT
Ga0187879_101338932	3300017946	Peatland	MEPGVIGVIGLLFGSMLAWLALRSRTAALSARLSLMEKELAAGKADLARLQQAHTDLVAGKARLES
Ga0187879_106083112	3300017946	Peatland	MELVVSGVIGLLFGSVIAGLILRSRTAGLSARLSFMEKELAAEKARLARLQQDYTELIAGKARA
Ga0187847_102288581	3300017948	Peatland	MEPGVIGVIGLLFGSLIAWLALRSRTATLSARLSLMEKELAAGKADLARLQQVHTELVAGKARLESALEGERKTNDEKIALV
Ga0187847_108739682	3300017948	Peatland	MGPGTSIGIGLLFGGLLAWLALRSRTAALNARLSLMEKELAAGKADFKRLQEAHELLVASKARLESALESERKTSNEKIELVTQASEDLRNAF
Ga0187805_103607862	3300018007	Freshwater Sediment	MGPGITGVIGLLFGSLLAWLALRSRTAALRARLSLLEKELTADKADRARLQQAHTELVAGQA
Ga0187860_13353442	3300018014	Peatland	MEPGVIGVIGLLFGSLLAWLALRSRTAGLNARLSLMEKDLAAGKADLARLLQAQTELVASKARLESTLESERKTSNEKVELVT
Ga0187875_101123331	3300018035	Peatland	MEPSVIGVIGLLFGSLIAWLALRSRGAALSARLSLMEKELAAGKADLERLQRAHTELVAGKAR
Ga0187862_102374192	3300018040	Peatland	MGLGLSGGIGLLFGSVIAWLVLRSRTAGLNARLWLMEKELAAEKADLARLQQAHTDLVAGKARAESALESERKTS
Ga0187859_102623791	3300018047	Peatland	MELWIAGIVGLLFGSALAWLVLRSRTATLSARLFLMEKELTAGKEDLARLQQASTDLVAGKARLESDLASERKSSNEKIEFLTKAGE
Ga0187784_100685931	3300018062	Tropical Peatland	MEPGVIGVIGLLFGSLIAWLALRSRTAALKARLCLLEKELAAEKADLARLLADQTELVAARARAESTLES
Ga0187772_101778751	3300018085	Tropical Peatland	MEPGIIGVIGLLFGSVLAWRVLRSRPATLRARLSLRGKELAAGKGDLARLQRAHTELVAGRARL
Ga0187772_105111922	3300018085	Tropical Peatland	VPASIELGIGIVVGLLLGGLLAWLVLRSRTAALQARLSLMEKEIAAARNELVRLQQAQTELVAGKARLESALDSERKTSAEKIELLTRAGE
Ga0187772_109691862	3300018085	Tropical Peatland	VPASIELGIGITFGLLLGGLLAWLVLRSRTAALQARLTLLERDLLTAEDNVARLQQAQTELVAGKARLESALDSERKTSAEKIELLTRA
Ga0182025_11640551	3300019786	Permafrost	MEPVITGVIGLLFGSVIAWLALRSRTAGLSARLSLTEKELAAEKADLARLQQAHTDLVAGKARLESALEAERKTSNE
Ga0210407_102730702	3300020579	Soil	MEPGVIGVIGLLFGSVIAWLALRSRTATLTARLSLMEKELAAGKADLARLQQAHTELVAGKARAESTLASERKTNDEKIE
Ga0215015_110660952	3300021046	Soil	MELTTSVALGLLFGGVIAWLALRSSSAALQSRLSVTEKELATSRAELARLQGAHNELVAGKARAESALEAER
Ga0210389_103866692	3300021404	Soil	MELWITGVIGLLFGSVLAWLVLRSRTATLSARLSLMEKELAAGKADLARLQQAQTDLVAAKARLESDLASERRSNAEKIELVT
Ga0210387_118585112	3300021405	Soil	MEPGISGVIGLLFGCLIAWLVTRSRGGGLSIRLSLMEKELAAEKATLARLQQAYTELVAGKARLESALESERKT
Ga0210391_101352374	3300021433	Soil	MELAVSGVIGLLFGSVIAWLGLRSRTAGLSARLTFTEKELAAEKARLARLQQDSTELLIGKARAESALQAERKTS
Ga0242649_10669981	3300022509	Soil	MGLGTSIGIGLLFGGLLAWLLLRSRTVALSARLSLMEKELAAGKADFKRFQEAHELLIASKARLESALDSERKTSNEKIELVTQA
Ga0224550_10249011	3300022873	Soil	MEPGIIGVIGLLFGSVIAWLVLRSRTATLTARLSLIEKELAAGKADLARLQQAHTELVAGKARLESTLESERKTSDEKVALVTRASED
Ga0224544_10657421	3300023250	Soil	MELGTGGVIGLLFGSVIAWLVLRSRTATLNTRLSLMEKELTGEKADLARLQQAYTEAVAGKARLESTLEAERKTSDEK
Ga0208690_10250682	3300025434	Peatland	MEPSVIGVIGLLFGSLIAWLALRSRGAALSARLSLMEKELAAGKADLERLQRAHTELVAGKARAESALEAERKTSNEKIELVTRASEELRNA
Ga0208691_11041452	3300025612	Peatland	MGPGTSIGIGLLFGGLLAWLALRSRTAALNARLSLMEKELAAGKADFRRLQEAHELLVASKARLEMALES
Ga0257157_10553272	3300026496	Soil	MELVTSGVVGLLFGGVIAWLALRSKAVGSHARLSLMEKELTAAKADLARLQQAHTELVAGKAKLESALESERKTSNEKIDLITRAS
Ga0209008_10046561	3300027545	Forest Soil	MEPGITGVIGLLFGGLIAWLALRSRSAALHARSSLMEKELGIGKVDLARLQQAHTDLVAGKARAESALEAE
Ga0208042_10443921	3300027568	Peatlands Soil	MEPGVVGVIGLLFGSLIAWLALRSRTAGLSARLSLMEKELAAEKASLARLQEAYTELVASRAKVESTLES
Ga0209221_10237783	3300027609	Forest Soil	MEPGVIGVIGLLFGSLLAWLVLRFRTATLSARLSLMEKQLATQNADLARLQQAHTDVLTAKARLES
Ga0209420_11824671	3300027648	Forest Soil	MELGTGGVIGLLFGSVIAWLVLRSRTATLNTRLSLMEKELTGEKADLARLQQAYTEAVAGKARLESTLEAE
Ga0209736_10092035	3300027660	Forest Soil	MEPVVVGVIGLLFGSVIAALVLRSRSAGTSARLSLREKELEAEKASLARLQQAYTEVVAGKARVESALESERKTSNEKIELVTRASEELRNAFKA
Ga0209009_11359552	3300027667	Forest Soil	LFGSAIAWLALRSRSAGLGARLSLREKELEAEKASLARLQQAQTELVAGKARLESALESERKANN
Ga0209333_11230152	3300027676	Forest Soil	MEPGVIGVIGLLFGSLIAWLGLRSRTATLNARLSLMEKELAVEKADLARLRQAYTEVVAGKARLESALESERKT
Ga0209772_102400541	3300027768	Bog Forest Soil	MEPGVIGVIGLLFGSLIAWLALRSRTAGLSARLSLMEKELATEKASLARLQEAYTGLVASRARLESALDSERKASTEKIELVTRASE
Ga0209139_103318792	3300027795	Bog Forest Soil	MAGVIGLLFGSVFAWLVLRSRTATLTARLPLMEKELAAGKADLAGLQQARTELVATKARLESDLASERKSSEEKIKLVTHAS
Ga0209274_104287931	3300027853	Soil	MGLETSIGIGLSFGALFGGLLAWLALRSQTAALNARLSLMEKELAAGTADFKRLQEAHELLVASKARLESALESERKTSNEKIE
Ga0209693_101292632	3300027855	Soil	MELVIIGVIGVLFGSVLAWLVLRSRTAGLTERLSLMEKELAAGKADLERLQQARTELVAAKARLE
Ga0209624_110572872	3300027895	Forest Soil	MEPGVIGVIGLLFGSLIAWLALRSRNAALNVRLSLMEKELAAEKATLARVQQAYTELVASRARLESTLE
Ga0209488_102813352	3300027903	Vadose Zone Soil	MEPGIIGVIGLLFGSVIAWLALRSRTATLSARLSLMEKELAAGKADLARLQQAHTELVAGKARAESALESERKTNDEKIGLVTRASEELRNAFCKSQPP
Ga0265354_10140601	3300028016	Rhizosphere	MEPGVIGVIGLLFGSVIAWLVLRSRTATLSARLSLMEKELAAEKGRLERLQRDYTESVTATARLESDLE
Ga0265351_10275081	3300028020	Soil	MGLGTSIGIGLLFGGLLAWLVLRSRTVALSARLSLMEKELAAGKTDFKRFQEAHELLVASKAKLESALDSERKTSNEKIELVTQASDDLRNAFKAMASDALN
Ga0302219_101350841	3300028747	Palsa	MGPGITGVIGLLFGSLIAWLVLRSRTAALNARLSLMEKELTAEKADLARLQQAHTDLVAGKAR
Ga0302219_103368342	3300028747	Palsa	MEPGLIGFIGLLFGGMIAWLALRSRTAGLSARLSVMEKQLAAEKADLARLEQASTELVAAKARLESALE
Ga0302303_101071532	3300028776	Palsa	MEPGIIGVIGLLFGGVIAWLVLRSRTATLTERLSLIEKELAAGKADLARLQQAHTELVAGKARLESTLESERKTSDEKVGLLTRASE
Ga0302222_101554742	3300028798	Palsa	MELGTGGVIGLLFGSVIAWLVLRSRTATLNTRLSLMEKELTGEKADLARLQQAYTEAVAGKARLE
Ga0302218_101388351	3300028863	Palsa	MEPGLIGFIGLLFGGMIAWLALRSRTAGLSARLSVMEKQLAAEKADLARLEQASTELVAAKARLESALESERKA
Ga0302197_104059281	3300028873	Bog	MEPGVIGVIGLLFGSLIAWLVLRSHTATHTARLSLMEKELTAGKADLARLQQAYTEVVAGRARLESALEAERKAND
Ga0308309_115969222	3300028906	Soil	MELWITGVIGLLFGSVLAWLVLRSRTATLSARLSLMEKELAAGKADLAGLQKAHTDLVAGKARLESDLASERRNNAEKI
Ga0311359_110686971	3300029914	Bog	MEPGVIGVIGLVFGGLIAWLVLRSRTAALNTHVSLMEKDLAAGKADLARLLQVQTELVASKARLESTLESERKTSNEKVELLTR
Ga0311344_103641363	3300030020	Bog	MEPGVIGVIGLVFGGLIAWLVLRSRTAALNTHLSLMEKDLAAEKADLARLLQVQTELVASKAR
Ga0302182_101194921	3300030054	Palsa	MGPGTSIGIGLLFGGLLAWLALRSRTAALTARLSLMEKELAAGKADFKRLQEAHELLVASKARLESALESERKTSNEKIELVTQA
Ga0302184_102520931	3300030490	Palsa	MEPVFAGVIGLLFGSVIAWLALRSRTAALSARLSLTEKQLAVQNADLVRLQQALTDVVAGKARLESALEAERK
Ga0265460_111467282	3300030740	Soil	MGPGTSIGIGLLFGGLLAWLLLRSRTVALSARLSLMEKELAAGKADFKRFQEAHELLVASKARLESALDSERKTSNEKIELVTQASEVLRNAFKAMASDA
Ga0302312_102101082	3300030746	Palsa	MELGVIGVIGLLFGSVIAWLVLRSRTATLTARLSLMEKELAAGKADLARLQQAQTELVAGKARLESALEAERKTNDEKIALVTRASDDLRNA
Ga0265740_10469762	3300030940	Soil	MEPGVIGVIGLLFGSLIVWLVLRSRTATIRERLSLMEKELAAGRADLARLQQAHTELVAGKARLESALESERKTNDEK
Ga0302326_115069751	3300031525	Palsa	MEPGVIGVIGLLFGSVIAWLGLRSRTATLNARLSLMEKELAVEKGDLARLQQTYTEVVAGKARLESALESERKASNEKVELVTRASEELRNAFK
Ga0310686_1146630572	3300031708	Soil	MELWITGVIGPLFGSVLAWLVLRSRTATLSARLSLMEKELEAGRADLERLQKAHTELVAGKARLESDLASERRNNAEKIEL
Ga0307474_101953103	3300031718	Hardwood Forest Soil	MEPGLIGVIGLLFGSVIAWLVLRSRTSTLLTRLSLMEKELTAGKADLARLQQAHTELVAGKAHAESALEAERKASNEKIELVTRASE
Ga0307474_102989171	3300031718	Hardwood Forest Soil	MEPGVIGVIGLLFGSVIAWLVLRSRSAALSARLSLREKELEGEKASLARLQQAHTELVAGKARLESALESERKTSNEKIELVTR
Ga0307477_102117502	3300031753	Hardwood Forest Soil	MEPGVIGVIGLLFGSVLAWLTLRSRTATLTARLSLMEKELAAGKADLARLQQAHTELVAGKARLESALEA
Ga0302315_107117252	3300031837	Palsa	MEPGLIGFIGLLFGGMIAWLALRSRTAGLSARLSVMEKQLAAEKADLARLEQASTELVAAKARLESALESERKAS
Ga0307472_1005693981	3300032205	Hardwood Forest Soil	MELTTSVALGLLFGSLIAWLALRSSSAALRSRLSFTEKELATSRAELARLQLAHNELVAGKARAESALEGERKTSTEKIELLNR
Ga0326728_101269721	3300033402	Peat Soil	LPASMELGISAVLGLLFGGMLVWLALRSQKAALQARLSLVEKDLLAAKDDLARLQRAQTELVAGKARLESALDAERKTSAEKIELLTRAGE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100515

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences