Metagenome / Metatranscriptome Family F100560

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100560
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	82 residues
Representative Sequence	SGPSVRGDRADRNLFLAWGDVHDDGTMRLIRGSKLRLRDVDPRLIEEALRPGHRLVARIRLTGNREEPALTWSAGPAGAEPE
Number of Associated Samples	85
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.03 %
% of genes near scaffold ends (potentially truncated)	94.12 %
% of genes from short scaffolds (< 2000 bps)	82.35 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.451 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.137 % of family members)
Environment Ontology (ENVO)	Unclassified (46.078 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.137 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.09% β-sheet: 36.36% Coil/Unstructured: 54.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00440	TetR_N	27.45
PF01070	FMN_dh	6.86
PF00300	His_Phos_1	3.92
PF03795	YCII	1.96
PF13412	HTH_24	1.96
PF01636	APH	1.96
PF13384	HTH_23	1.96
PF02861	Clp_N	1.96
PF07690	MFS_1	1.96
PF00072	Response_reg	0.98
PF02604	PhdYeFM_antitox	0.98
PF01037	AsnC_trans_reg	0.98
PF13847	Methyltransf_31	0.98
PF00581	Rhodanese	0.98
PF05598	DUF772	0.98
PF12902	Ferritin-like	0.98
PF03176	MMPL	0.98
PF13420	Acetyltransf_4	0.98
PF01061	ABC2_membrane	0.98
PF01381	HTH_3	0.98
PF00933	Glyco_hydro_3	0.98
PF08241	Methyltransf_11	0.98
PF04073	tRNA_edit	0.98
PF13193	AMP-binding_C	0.98
PF00561	Abhydrolase_1	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	6.86
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	6.86
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	1.96
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.96
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.98
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	0.98
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.98
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.98
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.45 %
Unclassified	root	N/A	22.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.45 %
Unclassified	root	N/A	22.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.45 %
Unclassified	root	N/A	22.55 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	69.61 %
Unclassified	root	N/A	22.55 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	65.69 %
Unclassified	root	N/A	22.55 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	52.94 %
Unclassified	root	N/A	22.55 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.98 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.55 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	6.86 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.96 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.98 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.98 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.98 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.98 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.98 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.55 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	6.86 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.96 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.98 %
Actinospicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae	0.98 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.98 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.98 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.98 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.55 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	3.92 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.96 %
Actinocrinis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinocrinis	0.98 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.98 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.98 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.98 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.98 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.98 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.55 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.94 %
Micromonospora rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora rhizosphaerae	1.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.96 %
Actinocrinis puniceicyclus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinocrinis → Actinocrinis puniceicyclus	0.98 %
unclassified Actinoplanes	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → unclassified Actinoplanes	0.98 %
unclassified Conexibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter	0.98 %
Mycobacterium xenopi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium xenopi	0.98 %
Micromonospora inyonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora inyonensis	0.98 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.98 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.98 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.55 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.94 %
Micromonospora rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora rhizosphaerae	1.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.96 %
Conexibacter sp. S30A1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	0.98 %
Actinoplanes sp. SE50/110	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → unclassified Actinoplanes → Actinoplanes sp. SE50/110	0.98 %
Actinocrinis puniceicyclus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinocrinis → Actinocrinis puniceicyclus	0.98 %
Mycobacterium xenopi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium xenopi	0.98 %
Micromonospora inyonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora inyonensis	0.98 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.98 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.98 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_106219404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	603	Open in IMG/M
3300005435\|Ga0070714_100083752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2781	Open in IMG/M
3300005518\|Ga0070699_100086858	All Organisms → cellular organisms → Bacteria	2730	Open in IMG/M
3300005764\|Ga0066903_102933704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	925	Open in IMG/M
3300006034\|Ga0066656_10917060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	561	Open in IMG/M
3300006854\|Ga0075425_101024758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	941	Open in IMG/M
3300007076\|Ga0075435_100923761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	761	Open in IMG/M
3300009174\|Ga0105241_11549178	Not Available	639	Open in IMG/M
3300009792\|Ga0126374_10284193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1100	Open in IMG/M
3300010043\|Ga0126380_10493692	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300010043\|Ga0126380_11416401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	611	Open in IMG/M
3300010048\|Ga0126373_11734420	All Organisms → cellular organisms → Bacteria → Terrabacteria group	688	Open in IMG/M
3300010048\|Ga0126373_11827246	Not Available	671	Open in IMG/M
3300010359\|Ga0126376_11082150	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300010360\|Ga0126372_10248722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1524	Open in IMG/M
3300010360\|Ga0126372_10634849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1031	Open in IMG/M
3300010361\|Ga0126378_10674206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora rhizosphaerae	1146	Open in IMG/M
3300010361\|Ga0126378_12959745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	542	Open in IMG/M
3300010376\|Ga0126381_102756259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	702	Open in IMG/M
3300010398\|Ga0126383_11561651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	749	Open in IMG/M
3300012355\|Ga0137369_10444735	Not Available	926	Open in IMG/M
3300012359\|Ga0137385_10008573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	9021	Open in IMG/M
3300012948\|Ga0126375_11166300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	639	Open in IMG/M
3300016371\|Ga0182034_11029775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	712	Open in IMG/M
3300016371\|Ga0182034_11042083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	708	Open in IMG/M
3300016422\|Ga0182039_11429406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	629	Open in IMG/M
3300017821\|Ga0187812_1019798	All Organisms → cellular organisms → Bacteria	2324	Open in IMG/M
3300017823\|Ga0187818_10103256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1234	Open in IMG/M
3300017926\|Ga0187807_1028858	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1717	Open in IMG/M
3300020581\|Ga0210399_10561379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	946	Open in IMG/M
3300020582\|Ga0210395_10809136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	698	Open in IMG/M
3300021178\|Ga0210408_10880564	All Organisms → cellular organisms → Bacteria → Terrabacteria group	698	Open in IMG/M
3300021403\|Ga0210397_10917500	Not Available	678	Open in IMG/M
3300021404\|Ga0210389_10642427	All Organisms → cellular organisms → Bacteria → Terrabacteria group	833	Open in IMG/M
3300021432\|Ga0210384_11282585	Not Available	637	Open in IMG/M
3300021474\|Ga0210390_10255510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1484	Open in IMG/M
3300021476\|Ga0187846_10106688	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300021479\|Ga0210410_11282332	Not Available	625	Open in IMG/M
3300021560\|Ga0126371_13189655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	555	Open in IMG/M
3300021560\|Ga0126371_13520099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	528	Open in IMG/M
3300024227\|Ga0228598_1128527	Not Available	515	Open in IMG/M
3300025320\|Ga0209171_10295187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	867	Open in IMG/M
3300025898\|Ga0207692_10291634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	990	Open in IMG/M
3300025905\|Ga0207685_10008561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2922	Open in IMG/M
3300025916\|Ga0207663_10526129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	922	Open in IMG/M
3300025928\|Ga0207700_10061805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2842	Open in IMG/M
3300026551\|Ga0209648_10072190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2902	Open in IMG/M
3300027855\|Ga0209693_10278688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	817	Open in IMG/M
3300027889\|Ga0209380_10029337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3102	Open in IMG/M
3300027889\|Ga0209380_10070666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1993	Open in IMG/M
3300030877\|Ga0265777_111995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	650	Open in IMG/M
3300031544\|Ga0318534_10329550	Not Available	880	Open in IMG/M
3300031546\|Ga0318538_10431252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	714	Open in IMG/M
3300031640\|Ga0318555_10488493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	667	Open in IMG/M
3300031640\|Ga0318555_10728821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300031708\|Ga0310686_110086213	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2401	Open in IMG/M
3300031713\|Ga0318496_10342142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	826	Open in IMG/M
3300031723\|Ga0318493_10776341	Not Available	539	Open in IMG/M
3300031744\|Ga0306918_11161499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	597	Open in IMG/M
3300031748\|Ga0318492_10350897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	772	Open in IMG/M
3300031751\|Ga0318494_10049388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	2219	Open in IMG/M
3300031771\|Ga0318546_11347841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501	Open in IMG/M
3300031782\|Ga0318552_10158651	Not Available	1138	Open in IMG/M
3300031782\|Ga0318552_10664449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
3300031793\|Ga0318548_10549681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium xenopi	563	Open in IMG/M
3300031799\|Ga0318565_10146867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1143	Open in IMG/M
3300031799\|Ga0318565_10604599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	527	Open in IMG/M
3300031805\|Ga0318497_10018055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3383	Open in IMG/M
3300031819\|Ga0318568_10282642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinocrinis → Actinocrinis puniceicyclus	1029	Open in IMG/M
3300031819\|Ga0318568_10925022	Not Available	539	Open in IMG/M
3300031821\|Ga0318567_10726716	Not Available	563	Open in IMG/M
3300031831\|Ga0318564_10428630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	577	Open in IMG/M
3300031860\|Ga0318495_10412109	Not Available	595	Open in IMG/M
3300031894\|Ga0318522_10251572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	670	Open in IMG/M
3300031896\|Ga0318551_10362804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	821	Open in IMG/M
3300031897\|Ga0318520_10643016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300031912\|Ga0306921_11787252	Not Available	662	Open in IMG/M
3300031941\|Ga0310912_10641950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	825	Open in IMG/M
3300031942\|Ga0310916_10398141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora rhizosphaerae	1172	Open in IMG/M
3300031954\|Ga0306926_10324541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1904	Open in IMG/M
3300031954\|Ga0306926_12403435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → unclassified Actinoplanes → Actinoplanes sp. SE50/110	581	Open in IMG/M
3300032001\|Ga0306922_11526881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	667	Open in IMG/M
3300032044\|Ga0318558_10695645	Not Available	508	Open in IMG/M
3300032065\|Ga0318513_10546613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	567	Open in IMG/M
3300032067\|Ga0318524_10465677	Not Available	662	Open in IMG/M
3300032067\|Ga0318524_10778681	Not Available	506	Open in IMG/M
3300032076\|Ga0306924_11861922	Not Available	625	Open in IMG/M
3300032089\|Ga0318525_10007456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4776	Open in IMG/M
3300032261\|Ga0306920_100937484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1264	Open in IMG/M
3300032261\|Ga0306920_101927310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	830	Open in IMG/M
3300032515\|Ga0348332_13987083	Not Available	569	Open in IMG/M
3300032770\|Ga0335085_11100774	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300032805\|Ga0335078_11296017	Not Available	832	Open in IMG/M
3300033134\|Ga0335073_11137292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	791	Open in IMG/M
3300033158\|Ga0335077_10038578	All Organisms → cellular organisms → Bacteria → Proteobacteria	5898	Open in IMG/M
3300033158\|Ga0335077_10070306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4184	Open in IMG/M
3300033289\|Ga0310914_10132283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2183	Open in IMG/M
3300033289\|Ga0310914_11801879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	516	Open in IMG/M
3300033290\|Ga0318519_10190159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora inyonensis	1167	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.08%
Host-Associated	Host-Associated	3.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.16%
Aquatic	Environmental → Aquatic	3.92%
Plants	Host-Associated → Plants	3.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.92%
Freshwater	Environmental → Aquatic → Freshwater	2.94%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.98%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.98%
Cave	Environmental → Terrestrial → Cave	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.51%
Loam	Environmental → Terrestrial → Soil → Loam	10.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.94%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.98%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	53.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.96%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.98%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.96%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.98%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.98%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300030877	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1062194042	3300005332	Tropical Forest Soil	DRNLFLAWGDVHDDGTMRLIRGSKLRLRDVDPRLIEEAMRPGRRLVARIRLTGNQEPALTWSAEPADGEPE*
Ga0070714_1000837527	3300005435	Agricultural Soil	ADGFDFSGPNVRGDRADRHLFLAWGDVHSDGTLRLIRGSKLGLTRLDDQLVEEAMCPGHRLVAGIRLTGTRGEPALTWSAEPANAEPG*
Ga0070699_1000868583	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VTVRRDTDGFDFSGPYVRGARDDRHLFLAWGDVRDDGTLRLVCGSKLKLIEVDPGLVEAAMRPGYRLVARIRLTGTAGGPGLIWSAEPADAQPGSG*
Ga0066903_1029337042	3300005764	Tropical Forest Soil	FSGPYVRGARDDRHLYLAWGDVREDGTMWLVRGSKLKLIDVDPGLVEEAMRPGHQLVARIRLTGTGEGPSLTWSAEPAGADPG*
Ga0066656_109170603	3300006034	Soil	FSGPYVRGARDDRHLFLAWGDVRDDGTMRLVRGSKLKLTEVDPRLVEETMRPRHQLVARIRLTGTGDEPALTWSAGSAHAQPGSG*
Ga0075425_1010247581	3300006854	Populus Rhizosphere	VRHDADGFDFSGPNVRGDRADRHLFLAWGDVHSDGTLRLIRGSKLGLTRLDGQLVEDAMRPGHRLVAWIRLTGTRGEPALTWSAEPANAEPG*
Ga0075435_1009237612	3300007076	Populus Rhizosphere	DSQSARWEVPVTVRRDAEGFDFSGPSVRGDRADRNLFLAWGDVGHDGTMRLIRGSKLRLLDVDPRLIEEVMRPGHRLVARIRLTGNREEPALTWSAGPADAEPEA*
Ga0105241_115491781	3300009174	Corn Rhizosphere	HDADGFDFSGPNVRGDRADRHLFLAWGDVHSDGTLRLIRGSKLGLTRLDGQLVEEAMRPGHRLVAWIRLTGARGEPALTWSAEPANAEPG*
Ga0126374_102841931	3300009792	Tropical Forest Soil	DRNLFLAWGDVHDDGTMRLIRGSKLRLRDVDPRLIEDALRPNRRLVARIRLTGNREEPALTWSAGPADAEPQ*
Ga0126380_104936921	3300010043	Tropical Forest Soil	MRLIRGKLRLLDVDPRLIEEAMRPGHRLVARIRLTGNREEPALTWSAGQADAEPE*
Ga0126380_114164012	3300010043	Tropical Forest Soil	DDRNLFLAWGDVRDDGTMRLVRGSKLKLIEVNPRLVEEAMRPGHQLVARIRLTGTAGEPGLTWSAEPAHPKPGSG*
Ga0126373_117344201	3300010048	Tropical Forest Soil	DGFDFSGPYVRGARDDRNLFLAWGDVRGDGTMRLVRGSKLKITEVDPRLVEEAMRPGHRLVARIRLTGAPGLTWSAEPGGVPS*
Ga0126373_118272462	3300010048	Tropical Forest Soil	NDGFDFSGPYVRGARDDRNLFLAWGDVHDDGTMRLVRGSKLKLTQIDPRLVEEATRPGYQLVARIRLTGTPGLTWLAEPAHAQPGSG*
Ga0126376_110821501	3300010359	Tropical Forest Soil	RDADGLDFSGPSVRGDRADRNLFLAWGDIHDDGTMRLIRGSKLRLLDVDPRLIEEAMRPGHRLVARIRLTGNREEPALTWSAGQADAEPE*
Ga0126372_102487223	3300010360	Tropical Forest Soil	GGPYVRGARDDRNVFLAWGDVPGDGTMRLVRGSKLKILQVDSRLVEEAMRPGHQLVARIRLTGESSLTWSAEPADAGSKPERRPSSGAGP*
Ga0126372_106348491	3300010360	Tropical Forest Soil	PYVRGARDDRNVFLAWGDVPGDGTMRLVRGSKLKILQVDPRLVEEAMRPGHQLVARIRLTGEPSLTWSAEPAGADPSRAPVK*
Ga0126378_106742063	3300010361	Tropical Forest Soil	DGTMRLIRGSKLRLRDVDPRLIEDALRPNRRLVARIRLTGNREEPALTWSAGPADAEPEV
Ga0126378_129597452	3300010361	Tropical Forest Soil	GPYVRGARDDRNVFLAWGDVLGDGTMRLVRGSKLKILQVDPRLVEEAMRPGHQLVARIRLTGEPSLTWSAEPAGADPSRAPVK*
Ga0126381_1027562591	3300010376	Tropical Forest Soil	RRDGTMRLIRGSKLRLRDVDPRLIEEAMRPGYRLVARIRLTGNQGPALTWSAEPADGNPSRALPGP*
Ga0126383_115616512	3300010398	Tropical Forest Soil	SVRGDRADRNLFLAWGDVHDDGTLRLIRGSKLRLRDVDPRLIEEALRPGHRLVARIRLTGNREEPALTWSAAPAGAESE*
Ga0137369_104447351	3300012355	Vadose Zone Soil	PVPCDSPSARWEVPVTVRRDTDGFDFSGPYVRGARDDRHLFLAWGDVRDDGTMRLVRGSKLKLIEVDPRLVEETMRPGHQLVALIRLTGTPEEPGLTWSAESVHAQPGSG*
Ga0137385_100085731	3300012359	Vadose Zone Soil	DRADRHLGLAWGDVHSDGTLRLFRGSKLRLAGVDPRLVEEAMRPGHRLVARIRLTGTRGEPALTWSAGPADADLAGAPLK*
Ga0126375_111663001	3300012948	Tropical Forest Soil	DRSLFLAWGDVRDDGTMRLVRGSKFKLSQVDPSLVEEAMRPGHRLVARIRLTGEPSLTWSAEPAGADPSRAPVK*
Ga0182034_110297751	3300016371	Soil	RGAREDRHLFLAWGDVRDDGTMRLVRGSKLKLTQVDPRLIEEAMRPGHQLAARIRLTGEPGLTWSAEPVHAQPGSG
Ga0182034_110420832	3300016371	Soil	LDDATMRLIRGSKLRLRDVDPRLIEEALRPGHRLVARIRLTGNREEPALTWSAGPAGAEP
Ga0182039_114294061	3300016422	Soil	VRGDRTDRNLFLAWGDVHDDGTLQLIRGSKLRLRDVDPRLIEEALRPGHRLVARIRLTGSREEPALTWSARPADAEPE
Ga0187812_10197984	3300017821	Freshwater Sediment	LFLAWGDIRDDGTIRLVRGSKITLTQVDPRLVEEAMRPGHRLVARIRLTGTTGEPGLTWSAEPAHGQPGSG
Ga0187818_101032561	3300017823	Freshwater Sediment	MSQLRGARDDRNLFLAWGDIRDDGTMRLVRGSKITLTQVDPRLVEEAMRPGHRLVARIRLTGTTGEPGLTWSAEPAHGQPGSG
Ga0187807_10288581	3300017926	Freshwater Sediment	TVRRDADGIDFSGPYVRGARDDRNLFLAWGDVRDNGTMRLVRGSKIKLTEVDPRLVEEAMRPGHRLVARIRLTGTPGEPGLTWSAEPAHAQPGSG
Ga0210399_105613791	3300020581	Soil	EAPVTVRRDTDGFDFGGPYVRGARDDRNLFLAWGDVPGDGTLRLVRGSKLKLGEVDSRLVEEAMRPGHQLVAQIRLTGEPSLTWSAEPADADSASAPDG
Ga0210395_108091361	3300020582	Soil	SARWEMPVTVRHDTDGFDFSGPYVRGARDDRNLFLAWGDVRDDGTMRLVRGSKIKLTEVDPRLVEEAMRPGHRLVARIRLTGAAGEPGLAWSAEAAHAQPGSG
Ga0210408_108805643	3300021178	Soil	GFDFSGPNVHGARDDRHLFLAWGDLRDDGTMRLVRGSKLKLIEVDPRLVEETMRPGRQLIALIRLTGTPGLTWSAGPAHPQPGPR
Ga0210397_109175001	3300021403	Soil	RLERGRPGGRLLAARDLGPATVRRDADGFDFSGPYVRGDRADRNLFLAWGDVPGDGTLRLIRGSKLGLAGVGPRLVEDAMRPGHRLVARIRLTGTRDEPALTWSAGPAGTEPG
Ga0210389_106424271	3300021404	Soil	GFDFSGPNVHGARDDRHLFLAWGDVRDDGTMRLVRGSKLKLIEVDPRLVEETMRPGRQLIALIRLTGTPGLTWSAGPAHPQPGPR
Ga0210384_112825851	3300021432	Soil	FSGPYVRGDRADRNLFLAWGDVPGDGTLRLIRGSKLGLAGVGPRLVEDAMRPGHRLVARIRLTGTRDEPALTWSAGPAGTEPG
Ga0210390_102555101	3300021474	Soil	YVRGARDDRNLFLAWGDVRDDGTMRLVRGSKIKLTEVDPRLVEEAMRPGHRLVARIRLTGAAGEPGLAWSAEAAHAQPGSG
Ga0187846_101066881	3300021476	Biofilm	FSGPHVRGDRADRHLFLAWGDLRSDGTLRLIRGSKLKLVQVDPRLVEEAMHPGHRLVARIQLTGAVGAPLTWSAGPAEGSA
Ga0210410_112823321	3300021479	Soil	GTLRLIRGSKLGLADVGPRLVEDAMRPGHRLVARIRLTGTRDEPALTWSAGPAGTEPG
Ga0126371_131896552	3300021560	Tropical Forest Soil	FLAWGDVHDDGTMRLIRGSKLRLRDVDPRLIEDALRPNRRLVARIRLTGNREEPALTWSAGPADAEPEV
Ga0126371_135200992	3300021560	Tropical Forest Soil	GSKLRLRDVDPRLIEEAMRPGYRLVARIRLTGNQGPALTWSAEPADGNPSRALPGP
Ga0228598_11285271	3300024227	Rhizosphere	SPSARWEVPVTVRHDTDGFDFSGPYVRGARDDRNLFLAWGDVRDDGTMRLVRGSKIKLTEVDPRLVEEAMRPGHRLVARIRLTGTAGEPGLAWSAEAAHGQPGSG
Ga0209171_102951873	3300025320	Iron-Sulfur Acid Spring	SGPYVRGARDDRNLFLAWGDVGDDGTMRLVRGSKIKLTEVDPGLVEEAMRPGHRLVARIRLTGTAGEPGLTWSAEPAHGQPGSG
Ga0207692_102916341	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	FSGPNVRGDRADRHLFLAWGDVHSDGTLRLIRGSKLGLTRLDDQLVEEAMCPGHRLVARIRLTGTRGEPALTWSAEPANAEPG
Ga0207685_100085611	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	LFLAWGDVYSDGTLRLIRGSKLGLTRLDDQLVEEAMCPGHRLVARIRLTGTRGEPALTWSAEPANAEPG
Ga0207663_105261291	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	DRHLFLAWGDVHSDGTLRLIRGSKLGLTRLDGQLVEDAMRPGHRLVAWIRLTGTRGEPALTWSAEPANAEPG
Ga0207700_100618056	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LAWGDVHSDGTLRLIRGSKLGLTRLDDQLVEEAMCPGHRLVARIRLTGTRGEPALTWSAEPANAEPG
Ga0209648_100721901	3300026551	Grasslands Soil	FLAWGDVHDDSTLRLVRGSKLKLTEVDPRLVEEAMRPGHQLVARIRLTGTQEEPALTWSVRASG
Ga0209693_102786882	3300027855	Soil	SARWQVPVTVRRDSDGLDFSGPYVRGARDDRNLFLAWGDVRDDGTMRLIRGSKLKLTEVDPRIVEDALRPGHRLVARIRLTGTAGEPALTWSAEPAHGQPGSG
Ga0209380_100293371	3300027889	Soil	LAWGDVRDDGTMRLVRGSKIKLIEVDPRLVEEGMRPGHRLVARIRLTGTAGEPGLTWSAEPAHEQPGSG
Ga0209380_100706664	3300027889	Soil	LAWGDVRDDGTMRLVRGSKIKLIEVDPRLVEEAMRPGHRLVARIRLTGTAGEPGLAWSAEAAPGQPGSG
Ga0265777_1119951	3300030877	Soil	LDFSGPYVRGARDDRNLFLAWGDVRDDGTMRLIRGSKLKLDQADPRIIQDALRPGHRLVARIRLTGIAGEPGLTWSAEPAHGQPDSG
Ga0318516_104198521	3300031543	Soil	AEPVPGDSPSASWEVPVTVRHDADGFDFSGPSVRGDRTDRNLVLAWGDVHDDGTLRLIRGSKLRLRDVDPRLIEEALRPGHRLVARIRLTGNREEPALTWSARPADAEPE
Ga0318534_103295501	3300031544	Soil	GDRADRHLFLAWGDVPGDGTLRLIRGSKLKLTGADPRLVEEAMRPGHRLVARIRLTGTGEEPALTWSAGPGLVS
Ga0318538_104312521	3300031546	Soil	SPSASWEVPVTVRHDADGFDFSGPSVRGDRTDRNLFLAWGDVGHDGTMRLIRGSKLRLRDVDPRLIEDALRPNRRLVARIRLTGNREEPALTWSAGPAGAEPE
Ga0318555_104884931	3300031640	Soil	PVTVRRDADGFDFSGASVRGDRADRNLFLAWGDVHDDGTMRLIRGSKLRLRDVDPRLIEEALRPGHRLVARIRLTGNREEPALTWSAGPADAEPE
Ga0318555_107288212	3300031640	Soil	EVPVSVRRDADGFDFSGPYVRAARDDRHLYLAWGDVRDDGTMRLVRGSKLKLINVDPRVIEEAMRPGHELVARIRLTGAGGEPGLTWSAEPAGADPA
Ga0310686_1100862132	3300031708	Soil	PVTVRHDTDGFDFSGPYVRGARDDRNLFLAWGDVRDDGTMRLIRGSKIKLTEVDPRLVEEAMRPGHRLVALIRLTGTAGEPGLTWSAEPAHARPGSG
Ga0318496_103421422	3300031713	Soil	DDATMRLIRGSKLRLRDVDPRLIEEALRPGHRLVARIRLTGNREEPALTWSAGPAGAEPE
Ga0318493_107763412	3300031723	Soil	FDFSGPYVRGARDDRNLFLAWGDIRDDGTMRLVRGSKLKVTEVDPRLVEEAMRPGHQLVARIRLMGDPGLAWSAESG
Ga0306918_111614992	3300031744	Soil	SVRGDRADRNLFLAWGDVHDDGTMRLIRGSKLRLRDVDPRLIEDALRPNRRLVARIRLTGNREEPALTWSARPADAEPEV
Ga0318492_103508972	3300031748	Soil	VRGDRTDRNLFLAWGDVHDDGTLRLIRGSKLRLRDVDPRLIEEALRPGHRLVARIRLTGNREEPALTWSARPADAEPE
Ga0318494_100493884	3300031751	Soil	RNLFLAWGDVHDDGTLRLIRGSKLRLRDVDPRLIEEALRPGHRLVARIRLTGNREEPALTWSARPADAQPE
Ga0318546_113478412	3300031771	Soil	FLGWGDVRDDGTMRLVRGSKLKLIKVDPRVIEEAMRPGHELAARIRLTGDGEGPSLTWSAEPAGADPS
Ga0318552_101586511	3300031782	Soil	MRLIRGSKLRLRDVDPRLIEEALRPGHRLVARIRLTGNREEPALTWSAGPAGAEPE
Ga0318552_106644491	3300031782	Soil	VTVRRDADGFDFSGPYVRGARDDRHLFLAWGDVRDDGTMRLVRGSKLKLAEVDPRVVEEAIRPGHHLVARIRLTGDGAEPGLTWSAEAAGADPG
Ga0318529_103567892	3300031792	Soil	PVPGDSPSARWEAPVTVRRDADGFDFSGPSVRGDRADRNLFLAWGDVLDDATMRLIRGSKLRLRDVDPRLIEEALRPGHRLVARIRLTGNREEPALTWSAGPAGAEPE
Ga0318548_105496811	3300031793	Soil	GRPWLAAGPVPGGSLSARWEATVTVRRDADGFDFSGPYVRGARDDRHLFLAWGDVRDDGTMRLVRGSKLKLIKVDPRVIEEAIRPGHRLAARIQLTGAGEGPNLTWSVEPAGAGPA
Ga0318565_101468671	3300031799	Soil	TVRRDADGFDFSGPYVRGARDDRHLFLAWGDVRDDGTMRLVRGSKLKLAEVDPRVVEEAIRPGHHLVARIRLTGDGAEPGLTWSAEAAGADPG
Ga0318565_106045991	3300031799	Soil	FLAWGDVRDDGTMRLVRGSKLKLIEVDPRLVEEAMRPGHQLVARIRLTGTAGEPGLTWSAEPAHPKPGSG
Ga0318497_100180554	3300031805	Soil	SASRRTVPGDSPSARWEVPVTVRRDADGFDFSGPYVRGARDDRNLFLAWGDIRDDGTMRLVRGSKLKVTEVDPRLVEEAMRPGHQLVARIRLMGDPGLAWSAESG
Ga0318568_102826422	3300031819	Soil	GDVHDDGTMRLIRGSKFRLRDVDPRLIEEALRPGQRLVARIRLTGNREEPALTWSAGPADAEPE
Ga0318568_109250221	3300031819	Soil	ARWEAPVTVRRDADGFDFSGPSVRGDRADRNLFLAWGDVLDDATMRLIRGSKLRLRDVDPRLIEEALRPGHRLVARIRLTGNREEPALTWSAGPAGAEPE
Ga0318567_107267161	3300031821	Soil	VTVRRDADGLDFSGPSVRGDRADRNLFLAWGDVRDDGTMRLIRGSKLRLRDVDPRLIEDALRPNRRLVARIRLTGNREEPALTWSARPADAEPEV
Ga0318564_104286302	3300031831	Soil	AEVEAVRNLFLAWGDVHDDGTMRLIRGSKLRLRDVDPRLIEEALRPGHRLVARIRLTGNREEPALTWSAGPADAEPE
Ga0318495_104121092	3300031860	Soil	EVPVTVRRDADGFDFSGPYVRGARDDRNLFLAWGDIRDDGTMRLVRGSKLKVTEVDPRLVEEAMRPGHQLVARIRLMGDPGLAWSAESG
Ga0318522_102515721	3300031894	Soil	RDADGFDFSGASVRGDRADRNLFLAWGDVHDDGTMRLIRGSKFRLRDVDPRLIEEALRPGQRLVARIRLTGNREEPALTWSARPADAEPE
Ga0318551_103628041	3300031896	Soil	DVHDDGTMRLIRGSKLRLRDVDPRLIEDALRPNRRLVARIRLTGNREVPALTWSARPADAEPQV
Ga0318520_106430162	3300031897	Soil	RNLFLAWGDVHDDGTLRLIRGSKLRLRDVDSRLIEEALRPGHRLVARIRLTGNREEPALTWSARPADAQPE
Ga0306921_117872522	3300031912	Soil	HDDGTMRLIRGSKLRLRDVDPRLIEDALRPNRQLVARIRLTGNREEPALTWSARPADAEPEV
Ga0310912_106419502	3300031941	Soil	RDADGFDFSGPSVRGDRADRNLFLAWGDVHDDGTLRLIRGSKLRLRDVDPRLIEEALRPGHRLVARIRLTGNREEPALTWSARPADAEPE
Ga0310916_103981413	3300031942	Soil	DDATMRLIRGSKLRLRDVDPRLIEEALRPGHRLVARIRLTGNREEPALTWLAGPAGAEPE
Ga0306926_103245411	3300031954	Soil	SGPSVRGDRADRNLFLAWGDVHDDGTMRLIRGSKLRLRDVDPRLIEEALRPGHRLVARIRLTGNREEPALTWSAGPAGAEPE
Ga0306926_124034351	3300031954	Soil	DSPSARWEVSVTVRRDADGFDFSGPSVRGDRSDRNLFLAWGDVHDDGTMRLIRGSKLRLRDVDPRLIEDALRPNRRLVARIRLTGNREEPALTWSARPADAEPEV
Ga0306922_115268812	3300032001	Soil	RPWRAADPVPGDAPWARWQAPVTVRRDADGFDFSGPYVRGAREDRHLFLAWGDVRDDGTMRLVRGSKLKLTQVDPLLVEEAMRPWHQLAAQIRLTGEPGLIWSAESAHAQPGSG
Ga0318558_106956451	3300032044	Soil	SRPSVRGDRADRNLFLAWGDVRDDGTMRLIRGSKLRLRDVDPRLIEDALRPNRRLVARIRLTGNREEPALTWSARPADAEPEV
Ga0318513_104667642	3300032065	Soil	PVPGDSPSARWEVSVTVRRDADGFDFSGPSVRGDRSDRNLFLAWGDVHDDGTMRLIRGSKLRLRDVDPRLIEDALRPNRQLVARIRLTGNREEPALTWSARTADAESEV
Ga0318513_105466132	3300032065	Soil	TMRLIRGSKLRLRDVDPRLIEEALRPGHRLVARIRLTGNREEPALTWSAGPAGAEPE
Ga0318524_104656771	3300032067	Soil	GPSVRGDRSDRNLFLAWGDVHDDGTMRLIRGSKLRLRDVDPRLIEDALRPNRRLVARIRLTGNREEPALTWSARPADAEPQV
Ga0318524_107786812	3300032067	Soil	DFSGPYVRGARDDRNLFLAWGDVRDDGTMRLVRGSKLKLIEVDPRLVEEAMRPGHQLVARIRLTGTAGEPGLTWSAEPAHPKPGSG
Ga0306924_118619221	3300032076	Soil	VRRDEDGLDFSGPYVRGARDDRNLFLAWGDVRDDGTMRLVRGSKLKLIEVDPRLVEEAMRPGHQLVARIRLTGTAGEPGL
Ga0318525_100074565	3300032089	Soil	DADGFDFSGPYVRGARDDRNLFLAWGDIRDDGTMRLVRGSKLKVTEVDPRLVEEAMRPGHQLVARIRLMGDPGLTWSAESG
Ga0306920_1009374841	3300032261	Soil	WGDVHDDGTLRLIRGSKLRLRDVDPRLIEEALRPGHRLVARIRLTGNREEPALTWSARPADAEPE
Ga0306920_1019273102	3300032261	Soil	PSARWEVPVTVRRDADGFDFSGPSVRGDRADRNLFLAWGDVHDDGTMRLIRGSKLRLRDVDPRLIEDALRPNRRLVARIRLTGNREEPALTWSARPADAEPQV
Ga0348332_139870831	3300032515	Plant Litter	WEMPVTVRHDTDGFDFSGPYVRGARDDRNLFLAWGDVRDDGTMRLIRGSKLKLAEADPRIIQDALRPGHRLVARIRLTGIAAEPGLTWSAEPANGQPGSG
Ga0335085_111007741	3300032770	Soil	DRNLFLAWGDVPGDGTLRLIRGSKLGLAGVGARLVEDAMRPGHRLVAWIRLTGSGGEPGLTWSAGPADTEPR
Ga0335078_112960171	3300032805	Soil	GPYVRGARADRHLFLAWGEVPGDGTLRLIRGSKLGLLGVDPHLIEEAMRPGFRLAARIRLTGA
Ga0335073_111372921	3300033134	Soil	ADGFDFSGPNVRGDRADRHLFLAWGDVPGDGTLRLIRGSKLGLTRIDGQLIEAAMRPGQRLVARIRLTGSRGEPALTWSAEPVTAEPG
Ga0335077_100385788	3300033158	Soil	GTLRLIRGSKLGLLGVDPHLIEEAMRPGFRLAARIRLTGTRGEPALTWSAGSAEADPG
Ga0335077_100703063	3300033158	Soil	VRRDEDGLDFSGPYVRGARADRHLFLAWGEVPGDGTLRLIRGSKLGLLGVDPHLIEEAMRPGFRLAARIRLTGA
Ga0310914_101322831	3300033289	Soil	GLDFSGPYVRGARDDRHLFLAWGDVRDDGTMRLVRGSKLKLTHVDPRLVEETMRPGHQLAARIRLTGEPGLTWSAEPVHAQPGSG
Ga0310914_118018791	3300033289	Soil	PGNSPSARWEALVTVRRDADGFDFSGPYVRGARDDRHLFLAWGDVRDDGTMRLVRGSKLKLAEVDPRVVEEAIRPGHHLVARIRLTGDGAEPGLTWSAEAAGADPG
Ga0318519_101901592	3300033290	Soil	VHDDGTMRLIRGSKLRLRDVDPRLIEDALRPNRQLVARIRLTGNREEPALTWSARTADAESEV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100560

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences