Metagenome / Metatranscriptome Family F100757

Basic Information
Family ID	F100757
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	59 residues
Representative Sequence	MKPALILAQVLSAISICWAQSPKPQARLEAEYYVVAYAQHYRVPVALVRAIVERE
Number of Associated Samples	95
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	96.08 %
% of genes near scaffold ends (potentially truncated)	96.08 %
% of genes from short scaffolds (< 2000 bps)	79.41 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Most Common Taxonomy
Group	Unclassified (53.922 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.745 % of family members)
Environment Ontology (ENVO)	Unclassified (24.510 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.804 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 55.42% β-sheet: 0.00% Coil/Unstructured: 44.58%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00004	AAA	12.75
PF07728	AAA_5	11.76
PF12728	HTH_17	4.90
PF00589	Phage_integrase	3.92
PF01464	SLT	2.94
PF08279	HTH_11	0.98
PF00196	GerE	0.98
PF13366	PDDEXK_3	0.98
PF13432	TPR_16	0.98
PF00126	HTH_1	0.98
PF13649	Methyltransf_25	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
All Organisms	root	All Organisms	46.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
cellular organisms	root	All Organisms → cellular organisms	46.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	35.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	17.65 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	17.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.75 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	3.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.75 %
Acidobacteriaceae bacterium TAA 166	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium TAA 166	3.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10078528	All Organisms → cellular organisms → Bacteria	1768	Open in IMG/M
3300002245\|JGIcombinedJ26739_100244233	All Organisms → cellular organisms → Bacteria	1684	Open in IMG/M
3300002917\|JGI25616J43925_10219456	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300003368\|JGI26340J50214_10110330	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium TAA 166	701	Open in IMG/M
3300004092\|Ga0062389_104403607	Not Available	530	Open in IMG/M
3300004152\|Ga0062386_101184925	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005537\|Ga0070730_10638638	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium TAA 166	677	Open in IMG/M
3300005602\|Ga0070762_10082813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1828	Open in IMG/M
3300005610\|Ga0070763_10433018	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium TAA 166	744	Open in IMG/M
3300005764\|Ga0066903_103328935	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium TAA 166	868	Open in IMG/M
3300006797\|Ga0066659_11326862	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300009090\|Ga0099827_10228632	Not Available	1556	Open in IMG/M
3300009524\|Ga0116225_1212422	Not Available	873	Open in IMG/M
3300009616\|Ga0116111_1072199	All Organisms → cellular organisms → Bacteria → Acidobacteria	930	Open in IMG/M
3300009633\|Ga0116129_1027860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1901	Open in IMG/M
3300009651\|Ga0105859_1051679	All Organisms → cellular organisms → Bacteria → Acidobacteria	1049	Open in IMG/M
3300009698\|Ga0116216_10343880	Not Available	907	Open in IMG/M
3300009759\|Ga0116101_1184595	Not Available	526	Open in IMG/M
3300009824\|Ga0116219_10598569	Not Available	606	Open in IMG/M
3300009839\|Ga0116223_10027716	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3886	Open in IMG/M
3300009839\|Ga0116223_10558185	Not Available	663	Open in IMG/M
3300010343\|Ga0074044_11065120	Not Available	530	Open in IMG/M
3300010366\|Ga0126379_10154953	All Organisms → cellular organisms → Bacteria	2141	Open in IMG/M
3300010379\|Ga0136449_100299918	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2931	Open in IMG/M
3300010396\|Ga0134126_11155298	Not Available	862	Open in IMG/M
3300011271\|Ga0137393_10786780	Not Available	813	Open in IMG/M
3300012202\|Ga0137363_10060953	All Organisms → cellular organisms → Bacteria → Acidobacteria	2741	Open in IMG/M
3300012209\|Ga0137379_11572582	Not Available	557	Open in IMG/M
3300014491\|Ga0182014_10073560	Not Available	2183	Open in IMG/M
3300014493\|Ga0182016_10448036	Not Available	755	Open in IMG/M
3300015193\|Ga0167668_1049266	Not Available	885	Open in IMG/M
3300017933\|Ga0187801_10018431	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2352	Open in IMG/M
3300017933\|Ga0187801_10195775	Not Available	799	Open in IMG/M
3300017942\|Ga0187808_10197481	Not Available	894	Open in IMG/M
3300017942\|Ga0187808_10384059	Not Available	640	Open in IMG/M
3300017943\|Ga0187819_10030680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3168	Open in IMG/M
3300017946\|Ga0187879_10792857	Not Available	529	Open in IMG/M
3300017955\|Ga0187817_10770016	Not Available	614	Open in IMG/M
3300017995\|Ga0187816_10042828	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1873	Open in IMG/M
3300018007\|Ga0187805_10080089	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1472	Open in IMG/M
3300018017\|Ga0187872_10249486	Not Available	795	Open in IMG/M
3300018035\|Ga0187875_10779237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300018038\|Ga0187855_10516625	Not Available	696	Open in IMG/M
3300019786\|Ga0182025_1309432	Not Available	1347	Open in IMG/M
3300019879\|Ga0193723_1102147	Not Available	808	Open in IMG/M
3300020582\|Ga0210395_11065594	Not Available	597	Open in IMG/M
3300021168\|Ga0210406_10954377	Not Available	641	Open in IMG/M
3300021180\|Ga0210396_11208665	Not Available	632	Open in IMG/M
3300021181\|Ga0210388_11668554	Not Available	528	Open in IMG/M
3300021401\|Ga0210393_10895002	Not Available	720	Open in IMG/M
3300021406\|Ga0210386_10910795	Not Available	752	Open in IMG/M
3300021406\|Ga0210386_11252607	Not Available	626	Open in IMG/M
3300021432\|Ga0210384_10078628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2966	Open in IMG/M
3300021433\|Ga0210391_10569434	Not Available	889	Open in IMG/M
3300021474\|Ga0210390_10931332	Not Available	713	Open in IMG/M
3300021477\|Ga0210398_10629694	Not Available	870	Open in IMG/M
3300021478\|Ga0210402_10144355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2165	Open in IMG/M
3300021479\|Ga0210410_10202084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1780	Open in IMG/M
3300022830\|Ga0224515_1052724	Not Available	559	Open in IMG/M
3300023090\|Ga0224558_1009343	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6170	Open in IMG/M
3300024227\|Ga0228598_1017822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1401	Open in IMG/M
3300025404\|Ga0208936_1030356	Not Available	715	Open in IMG/M
3300027297\|Ga0208241_1016549	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1077	Open in IMG/M
3300027674\|Ga0209118_1006226	All Organisms → cellular organisms → Bacteria	4417	Open in IMG/M
3300027783\|Ga0209448_10009387	All Organisms → cellular organisms → Bacteria → Acidobacteria	3111	Open in IMG/M
3300027846\|Ga0209180_10033183	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2789	Open in IMG/M
3300027854\|Ga0209517_10090705	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2088	Open in IMG/M
3300027854\|Ga0209517_10095351	All Organisms → cellular organisms → Bacteria	2021	Open in IMG/M
3300027857\|Ga0209166_10434071	Not Available	679	Open in IMG/M
3300027867\|Ga0209167_10140490	Not Available	1261	Open in IMG/M
3300027882\|Ga0209590_10330831	Not Available	980	Open in IMG/M
3300027884\|Ga0209275_10051912	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1975	Open in IMG/M
3300027905\|Ga0209415_10119087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2797	Open in IMG/M
3300028572\|Ga0302152_10158460	Not Available	726	Open in IMG/M
3300028800\|Ga0265338_10044539	All Organisms → cellular organisms → Bacteria	4096	Open in IMG/M
3300028860\|Ga0302199_1226182	Not Available	566	Open in IMG/M
3300028906\|Ga0308309_10049876	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3009	Open in IMG/M
3300029883\|Ga0311327_10839609	Not Available	533	Open in IMG/M
3300029944\|Ga0311352_10859057	Not Available	706	Open in IMG/M
3300029953\|Ga0311343_10109550	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3140	Open in IMG/M
3300029986\|Ga0302188_10472843	Not Available	510	Open in IMG/M
3300030058\|Ga0302179_10476002	Not Available	549	Open in IMG/M
3300030399\|Ga0311353_10455868	All Organisms → cellular organisms → Bacteria → Acidobacteria	1141	Open in IMG/M
3300030503\|Ga0311370_11637690	Not Available	664	Open in IMG/M
3300030518\|Ga0302275_10044597	All Organisms → cellular organisms → Bacteria	3389	Open in IMG/M
3300030618\|Ga0311354_11190837	Not Available	690	Open in IMG/M
3300030618\|Ga0311354_11732538	Not Available	545	Open in IMG/M
3300030659\|Ga0316363_10027978	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2925	Open in IMG/M
3300030706\|Ga0310039_10373245	Not Available	529	Open in IMG/M
3300030707\|Ga0310038_10097660	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1540	Open in IMG/M
3300030940\|Ga0265740_1034673	Not Available	574	Open in IMG/M
3300031525\|Ga0302326_10554056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1724	Open in IMG/M
3300031525\|Ga0302326_12427351	Not Available	660	Open in IMG/M
3300031712\|Ga0265342_10662862	Not Available	523	Open in IMG/M
3300031715\|Ga0307476_10201988	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1443	Open in IMG/M
3300031720\|Ga0307469_11608950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300031754\|Ga0307475_10526873	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	948	Open in IMG/M
3300032001\|Ga0306922_11281652	Not Available	742	Open in IMG/M
3300032805\|Ga0335078_11694181	Not Available	694	Open in IMG/M
3300032828\|Ga0335080_10589372	Not Available	1170	Open in IMG/M
3300032895\|Ga0335074_10370438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1576	Open in IMG/M
3300033561\|Ga0371490_1159736	Not Available	552	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.06%
Host-Associated	Host-Associated	2.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.45%
Aquatic	Environmental → Aquatic	19.61%
Plants	Host-Associated → Plants	2.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.78%
Freshwater	Environmental → Aquatic → Freshwater	19.61%
Peat	Environmental → Terrestrial → Peat	16.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.10%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	19.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	16.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.84%
Loam	Environmental → Terrestrial → Soil → Loam	7.84%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.47%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	16.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.84%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.84%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	12.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.84%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.88%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.96%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.98%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.98%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.98%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.98%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.98%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009651	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022830	Peat soil microbial communities from Stordalen Mire, Sweden - IR.F.S.T-25	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025404	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028572	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028860	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029986	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030940	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033561	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_100785283	3300001356	Peatlands Soil	MKSAFIVAQMLCAISISWAQSGRALARIDAEYYVTVYAQHYRVPIA
JGIcombinedJ26739_1002442331	3300002245	Forest Soil	MKPALILAQVLSAISIFWAQSPKPAARLEAEYYVVAYAQHYRVPVSLVRAIVERESHWQACAVS
JGI25616J43925_102194561	3300002917	Grasslands Soil	MRPALILAQVLSAISICWPQSPKPQARLEAEYYVTAYAQHYRVPITLVRAIVERESHWQPCTISPK
JGI26340J50214_101103301	3300003368	Bog Forest Soil	MRAALIFAQVLSAISICWAQSPKPQARVEAEHYVASYAYHYRVPVALVRAIVERESNW
Ga0062389_1044036072	3300004092	Bog Forest Soil	MKLVLILAQALCAISICWAQSLKPQARLEAEYYVVAYAQHYRVPVTLV
Ga0062386_1011849252	3300004152	Bog Forest Soil	MRPALIFAQVLSAISICWAQTPKPQERIKAEYYVESYAHRYKVPVALVRAIVEHESNWQPCVASPK
Ga0070730_106386381	3300005537	Surface Soil	MRSLGVLLIAACMLGTCLAQSSGKRAEAEYYVRAYARHYHVPEALVRAVVERESNWQICAVSSK
Ga0070762_100828134	3300005602	Soil	MKSVLIVTQMFCTISICWVQSGRAQTQIEAENYVTAYAKHYRVPVALAHAIAMRESNWQSCV
Ga0070763_104330182	3300005610	Soil	MKLALLLAHAVCAISTCWAQSSKLPTRPEAEYYVAAYAQHYRVPVALVRAIVERESNWQPCAVS
Ga0066903_1033289351	3300005764	Tropical Forest Soil	MKPALIMVQVLGAITICGARSGDRATRMEAEYYVAAYAEHYRVPVALVRAIVQQESNWQACSI
Ga0066659_113268621	3300006797	Soil	MKLALILAHALSAISICWAQSPKPQTRMESEYYVAAYAQHYRVSVALVRAIVERESNWQPCV
Ga0099827_102286324	3300009090	Vadose Zone Soil	MRTLLILTQVLAAISIGWAQSSKPQIRLESEYYVTAYAQHYRVPVPLARHCRS*
Ga0116225_12124221	3300009524	Peatlands Soil	MKLVLILAQALCAISICWAESPKPQARLEAEYYVVAYAQHYRVSVALVRAIVER
Ga0116111_10721991	3300009616	Peatland	MKLVLIVAEMLCTISIGWAQSGRAPTRIEAEYYVTAYAQHYRVPVALARALVVRESNWQPCVISPKGA
Ga0116129_10278604	3300009633	Peatland	MKPALILAQVLSAISICWAQSPKPQARLEAEYYVVAYAQHYRVPVALVRAIVE
Ga0105859_10516792	3300009651	Permafrost Soil	MTRAFAVLMALCAITVCRAQSNTPAGRLEAEYYVSAYAQHYGVPVPLARAIVER*
Ga0116216_103438801	3300009698	Peatlands Soil	MKPALILVQVLSAISICWAQSPKPQARLEAEYYVAAYAQHYRVPVALVRAIVEHESHWQACAVSPK
Ga0116101_11845952	3300009759	Peatland	MKPVLMFAQVLSAISICWAQSPNPQSRADAEYYVASYAHHYNVPVSLVRAIV
Ga0116219_105985691	3300009824	Peatlands Soil	MKPALIMAQVLSAISICWARTPTPQERIEAEYYVTAYAQRYKVPVALVRVIVEHESNWQPCVVS
Ga0116223_100277161	3300009839	Peatlands Soil	MKLVLILAQALYAISICWAQSPKPQARLEAEYYVVAYAQHYRVPVALVRAIVERES
Ga0116223_105581851	3300009839	Peatlands Soil	MKSAFIVAQMLCAISISWAQSGRALARIDAEYYVTVYAQHYRVPIALARAIVVRESNWQP
Ga0074044_110651202	3300010343	Bog Forest Soil	MKAVLILAQVLSAISICWAQSPKPQARLEAEYYVVAYAQHYRVPVALVRAIVERESHWQACAVSPK
Ga0126379_101549533	3300010366	Tropical Forest Soil	MKSLFIGVVLLSMISICVAQSRNRATRMEAEYYVAAYAGHYRVPPALVRAIVERESNW*
Ga0136449_1002999181	3300010379	Peatlands Soil	MKLVLILAQALYAISICWAQSPKPQARLEAEYYVVAYAQHYRVPVALVRAIVERESHWQACAVSP
Ga0134126_111552982	3300010396	Terrestrial Soil	VKWELLLVEVFCSLQICSAQSKPSYARLEAEYYVAAYSQHYHVPVALVRAII
Ga0137393_107867802	3300011271	Vadose Zone Soil	MRPALILAQVLSAISICWAQSPKPAARLEAEYYVVAYAQHYRVPVALVRAIVER
Ga0137363_100609534	3300012202	Vadose Zone Soil	MKLVLILAQALCAISTCWAQSAKPPARIEAEYYVVAYAQHYRVPVALVRAIVEHESHWQACAV
Ga0137379_115725821	3300012209	Vadose Zone Soil	MKPALILAQVLSAISICWAQSPKPQARLEAEYYVVAYAQHYRVPVALVRAIVERESHWRACAVSPK
Ga0182014_100735604	3300014491	Bog	MKLVFILAQALCAISICWAQSPKPQARLEAEYYVVAYAQHYRVPVALVRAIVERESHWQA
Ga0182016_104480362	3300014493	Bog	MKPALILAQVLCAISICWAQSPKPQALLESEYYVVAYAQHYRVPVALVRAIVERESHWQACAV
Ga0167668_10492661	3300015193	Glacier Forefield Soil	MKLVLILAQALCAISSCWAQSHKPQARLEAEYYVVAYTQHYRVPVALVRAIVERESHWQTCAVSPKGA
Ga0187801_100184314	3300017933	Freshwater Sediment	MKSVLIAAEVLCTITICWAQSGRATARIEANYYVTAYAQHYRVPIALAR
Ga0187801_101957752	3300017933	Freshwater Sediment	MKLVFILVQALCAISICWAQSPKPQARLEAEYYVVAYAQHYRVPVALVRAIV
Ga0187808_101974812	3300017942	Freshwater Sediment	MKLVLIVAEMLCTISIGWAQSGRAPTRIEAEYYVTAYAQHYRVPVALARALV
Ga0187808_103840592	3300017942	Freshwater Sediment	MKPALILAQVLCAISICWAQSLKPQARLEAEHYVTAYAQHYRVPVALVRAIVERESHWQ
Ga0187819_100306805	3300017943	Freshwater Sediment	MKSALILAQMLCAISICWAQSGRAPAQIEAEYYVAAYAQHYRVPIALARAIV
Ga0187879_107928572	3300017946	Peatland	MKSALIAVEMLCMISIGRAQSGRPPARIEAEHYVTAYARHYRVPVALVRAIVEHESNWQ
Ga0187817_107700161	3300017955	Freshwater Sediment	MKLVLIVAEMLCTISIGWAQSGRAPTRIEAEYYVTAYAQHYRVPVALARAL
Ga0187816_100428281	3300017995	Freshwater Sediment	MKLVLIVAEMLCTISIGWAQSGRAPTRIEAEYYVTAYAQHYRVPVALAR
Ga0187805_100800891	3300018007	Freshwater Sediment	MKSVFIVVGVLCTISICWAQSSRAPARIEAEYYVTTYAKHYRVPIALARAIVVRESNWQP
Ga0187872_102494861	3300018017	Peatland	MKLVLIVAEMLCTISIGWAQSGRAPTRIEAEYYVTAYAQHYRVPVALARALVVRESNCQPCVI
Ga0187875_107792371	3300018035	Peatland	MKPALILAQVLSAISICWAQSPKPQARLEAEYYVVAYAQHYRVPVALVRAIVERESHWQACAVSPKG
Ga0187855_105166251	3300018038	Peatland	VRAALIFAQVLSAISICWAQTPKPRERFEAEYYVASYAHHYKVPVALVRAIVDHESNWQP
Ga0182025_13094321	3300019786	Permafrost	MKSALIVVGMLCATSIGWAQSRRPPARIEAEYYVAAYARHYRVPIALVRGAIV
Ga0193723_11021472	3300019879	Soil	MKSAFIVAQLLCALSGCWAQSYRSPVRLEAEYYVSVYAQHYHVPIRLVRAIIQRESN
Ga0210395_110655941	3300020582	Soil	MKSALILAQMLCAIPICWAQSSRAPARMEAAYYVSAYAEHYRVPIAL
Ga0210406_109543772	3300021168	Soil	MKSVLIVTQMFCTISICWVQSGRAQTQIEAENYVTAYAKHYRVPVALAHAIAMRESNWQS
Ga0210396_112086652	3300021180	Soil	MKSALILAQMLCAIPICWAQSSRAPARMEAAYYVSAYAEHYRVPIA
Ga0210388_116685541	3300021181	Soil	MKSAFIVTGMLCAISIGWAQSGKAPARIEAEYYVTAYAQHYRVPVALARAIVLRESNWQPCVISPKG
Ga0210393_108950021	3300021401	Soil	MKSALILAQMLCVISICWAQSSRAPGRIEAEYYVAAYAQHYRVPVALVRAIVVRESNWQPCVISP
Ga0210386_109107952	3300021406	Soil	MKLALLLAQAVCAISTCWAQSSTLPTRLEAEYYVATYARHYRVPVALVRAIVERESNWQP
Ga0210386_112526071	3300021406	Soil	MKSALILAQMLCAIPICWAQSSRAPARMEAAYYVSAYAEHYRVPIALARAI
Ga0210384_100786285	3300021432	Soil	MKSVLIVTQMFCRISICWAQSGRAQTQIEAENYVTAYAKHYRVPVALAHAIAMRESNWQSCVISPK
Ga0210391_105694342	3300021433	Soil	MKAVFLVAEMLCTISICWSQSGRVPKRIDAEYYVTAYAQHYRVPIALAR
Ga0210390_109313322	3300021474	Soil	MKSALILAQMLCAISICWAQSDRAPARIEADHYVTGYAQHYRVPIALARAIVVRESNWQPCLISPKG
Ga0210398_106296941	3300021477	Soil	MKSVLIVAEMLCTISICWAQADRAPKRNEAEYYVTAYAQHYRVPIALARAIV
Ga0210402_101443551	3300021478	Soil	MKPALIFTQVLSVISICWAQTPKPQARMEAEYYVAAYAQRYGVPVALVRAIVEHESNWQP
Ga0210410_102020844	3300021479	Soil	MKSLFIVVQLLCILSIGWAQSDKVTTRLEAEYYIAAYARHYRVPVALVRAIVQRESNSRTCAVSTKGAVG
Ga0224515_10527242	3300022830	Soil	MKPALILAQVLCAISICWAQSSKPQARLEAEYYVVAYAQHYRVPVALVRAIVERESHWQACAVSPK
Ga0224558_10093431	3300023090	Soil	MKPALILAQVLSAISICWAQSPEPQARLEAEYYVAAYAQHYRVPVALVRAIVERESHWQACA
Ga0228598_10178223	3300024227	Rhizosphere	MKLVLILAQALCAISICWAQSPKPQARLEADYYVVAYAQHYRVPVALVRAIVERESHWRACAVS
Ga0208936_10303562	3300025404	Peatland	MKLVLIVAEMLCTISIGWAQSGRAPTRVEAEYYVRAYAQHYRVPVALARALVVRESNWQPCVS
Ga0208241_10165492	3300027297	Forest Soil	MKSALILAQLLCAISICWAQSDRAPARIEAEYYVTAYARHYRVPIALARA
Ga0209118_10062261	3300027674	Forest Soil	MKPALILAQVLSAISICWAQSPKPQTRLEAEYYVVAYARHYRVPVALVRAIVERESQWQPCTVSPKGA
Ga0209448_100093875	3300027783	Bog Forest Soil	MRPALILAQVLSAISICWAQSPKPQARLEAEYYVVAYTEHYRVPVSLVRAIVERESHWQACAVSPKGAA
Ga0209180_100331835	3300027846	Vadose Zone Soil	MRTLLILTQVPAAISIGWAQSSKPQIRLESEYYVTAYAQHYRVPVPLVRAIV
Ga0209517_100907054	3300027854	Peatlands Soil	MKPALILALVLSAISICWAQSPKPQVRLEAEYYVVAYAQHYRVPVALVRAIVER
Ga0209517_100953514	3300027854	Peatlands Soil	MRPALILAQVLSAISICWAQSPKPQARLEAEYYVAAYAQHYRVPVALVRAIVERESHWQA
Ga0209166_104340712	3300027857	Surface Soil	MRSLGVLLIAACMLGTCLAQSSGKRAEAEYYVRAYARHYHVPEALVRAVVERESNWQICAVSSKG
Ga0209167_101404902	3300027867	Surface Soil	MKPVLILGQALCAISICWAQSPKPKARLEAEYYVVAYAQHYRVPVALVRAIVERES
Ga0209590_103308312	3300027882	Vadose Zone Soil	MRTLLILTQVLAAISIGWAQSSKPQIRLESEYYVTAYAQHYRVPVPLARHCRS
Ga0209275_100519121	3300027884	Soil	MRLVLILAPVLCAISNCGAQSPKPQARLEAEYYVVAYAQHYRVPVALVRAIVDRESSWQACAV
Ga0209415_101190871	3300027905	Peatlands Soil	MKLVLILAQALYAISICWAQSPKPQARLEAEYYVVAYAQHYRVPVALVR
Ga0302152_101584602	3300028572	Bog	MRAALICAQVLSAILICWAQTPKPQERTEAEYYVAAYAHHYKVPVALVRAIVEHESNWQ
Ga0265338_100445391	3300028800	Rhizosphere	MKSVFIVAGMLCVTSIGSAQSNRAATRIEAEYYVTTYAQHYRVPIFLPRAIVVRESNWRPCVSSPKGAV
Ga0302199_12261822	3300028860	Bog	MRAALICAQVLSAILICWAQTPKPQERIKAEYYVESYAHRYKVPVALVRAIVEHESNWQP
Ga0308309_100498761	3300028906	Soil	MKLALLLAHAVCAISTCWAQSSKLPTRPEAEYYVAAYAQHYRVPVALVRAI
Ga0311327_108396092	3300029883	Bog	MRAALICAQVLSAILICWAQTPKPQERTEAEYYVAAYAHHYKVPVALVRAIVEHESNWQPCVA
Ga0311352_108590571	3300029944	Palsa	MRAALICAQVLSAILICWAQTPKPQERTEAEYYVAAYAHHYKVPVALVRAIVEHESNWQP
Ga0311343_101095501	3300029953	Bog	MRPALIFAQVLSAISICWAQTPKPQERIKAEYYVESYAHRYKVPVALVRAIVEHESNWQPCVVSPKG
Ga0302188_104728431	3300029986	Bog	MRPALIFAQVLSAISICWAQTPKPQERIKAEYYVESYAHRYKVPVALVRAIVEHESNWQ
Ga0302179_104760021	3300030058	Palsa	MKSALVVVGMLCIMSIGWAQSGKPSARIEAEYYVTAYARHYRVPVALVRSIVEHESNWQSCVISPKGA
Ga0311353_104558682	3300030399	Palsa	MKSVLIVEMLCAISGCWAQSSRPPARIEAEYYVTAYAQHYRVPVALARAIVIRESNWQICAI
Ga0311370_116376902	3300030503	Palsa	MKLVLIVAEMLCTISIGWAQSGRAPTRIEAEYYVTAYAQHYRVPVALARALVVRESNWQP
Ga0302275_100445977	3300030518	Bog	MKPALIFTQVLSVISICWAQTPKPQARMEAEYYVAAYAQRYGVPVALVRAIVEHESNWQPCVA
Ga0311354_111908371	3300030618	Palsa	MKSALIAVEMLCMISIGRAQSGRPPARIEAEYYVTAYARHYRVPVALVRSIVEH
Ga0311354_117325382	3300030618	Palsa	MRAALICAQVLSAILICWAQTPKPQERTEAEYYVAAYAHHYKVPVALVRAIVEHESNWHPCVVS
Ga0316363_100279781	3300030659	Peatlands Soil	MKLVLILAQALYAISICWAQSPKPQARLEAEYYVVAYAQHYRVPVALVRAIVERESHWQACAVSPK
Ga0310039_103732451	3300030706	Peatlands Soil	MKPALILAQVLSAISICWAQSPKPQARLEAEYYVVAYAQHYRVPVALVRAIVERE
Ga0310038_100976601	3300030707	Peatlands Soil	MKLVLILAQALCAISICWAQSPKPQARLEAEYYVVAYAQHYRVPVALVRAIVERESHWQACAV
Ga0265740_10346731	3300030940	Soil	MAQVLSAISICWAQTPKPQERTKAEYYVASYAHHYKVPVALVRAIVERESNWQPCVASPKGA
Ga0302326_105540563	3300031525	Palsa	MKSALIVVEMLCVISIGWAQSGRRPARIEAEYYVTAYARHYRVPVALVRAIVEHES
Ga0302326_124273511	3300031525	Palsa	MKPVLMFAQVLSAISICWAQSPNPQSRADAEYYVASYAHHYNVPVALVRAIVEH
Ga0265342_106628622	3300031712	Rhizosphere	MKSTLIVVGMLCVISSGWAQSGRPPARIEAEYYVTAYARYYRVPVVLV
Ga0307476_102019881	3300031715	Hardwood Forest Soil	MKLALLLAQAVCAISTCWAQASKLPTRLEAEYYVATYARHYRVPVALVRAIVERESSW
Ga0307469_116089502	3300031720	Hardwood Forest Soil	MKPVLIFAQVLAAISICQAQALTPQARGEAEYYVAAYAQYYRVPVALVRAIVERESNWHPCPVSYNLRR
Ga0307475_105268731	3300031754	Hardwood Forest Soil	MKLVLILAQALCAISICWAQSPKPQTRLEAEYYVTTYAQHYRVPVALVRAIVERESQWQ
Ga0306922_112816522	3300032001	Soil	MKVVLNLVLTGCAISICGAQSDTRGTRLEAEYYVAAYARHYRVPTALV
Ga0335078_116941812	3300032805	Soil	MRPALILAQVLSAISICWAQSSRAPGRTEAEYYVTAYAQHYRVPVALARAIVV
Ga0335080_105893722	3300032828	Soil	MKSVFIVGGMLCATSIGWAQSSRAPTRIEAEYYVTSYAQHYRVPVALVRAIVV
Ga0335074_103704383	3300032895	Soil	MKSSLILAQMLCAVSICWAQSDKPPVRVEAEYYVTAYAQHYQVPIALARAIVVRESDWH
Ga0371490_11597361	3300033561	Peat Soil	MKWALIVAEMLWTISIGWAQSGRAPTRVEAEYYITAYAQHYRVPVALARALVVRESNWQPCVSSP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100757

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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