Metagenome Family F100791

Basic Information
Family ID	F100791
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	41 residues
Representative Sequence	MKRMISSLMALALIALPLSAAEDKKETDRLENCGTVLKEIMDIPD
Number of Associated Samples	83
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.27 %
% of genes near scaffold ends (potentially truncated)	98.04 %
% of genes from short scaffolds (< 2000 bps)	88.24 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Most Common Taxonomy
Group	Bacteria (60.784 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (39.216 % of family members)
Environment Ontology (ENVO)	Unclassified (38.235 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.157 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 53.42% β-sheet: 0.00% Coil/Unstructured: 46.58%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF02113	Peptidase_S13	63.73
PF00488	MutS_V	1.96
PF13662	Toprim_4	0.98
PF13533	Biotin_lipoyl_2	0.98
PF00263	Secretin	0.98
PF03641	Lysine_decarbox	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2027	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	63.73
COG0249	DNA mismatch repair ATPase MutS	Replication, recombination and repair [L]	1.96
COG1193	dsDNA-specific endonuclease/ATPase MutS2	Replication, recombination and repair [L]	1.96
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.78 %
Unclassified	root	N/A	39.22 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.78 %
Unclassified	root	N/A	39.22 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.78 %
Unclassified	root	N/A	39.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.22 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	24.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.22 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	18.63 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.63 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.63 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.94 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10582236	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300001867\|JGI12627J18819_10440247	Not Available	533	Open in IMG/M
3300002914\|JGI25617J43924_10326698	Not Available	530	Open in IMG/M
3300004082\|Ga0062384_101053777	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300005171\|Ga0066677_10367881	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	823	Open in IMG/M
3300005446\|Ga0066686_10985377	Not Available	548	Open in IMG/M
3300005468\|Ga0070707_101705144	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300005526\|Ga0073909_10518978	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300005557\|Ga0066704_10098727	Not Available	1914	Open in IMG/M
3300006050\|Ga0075028_100835826	Not Available	563	Open in IMG/M
3300006050\|Ga0075028_101030230	Not Available	513	Open in IMG/M
3300006050\|Ga0075028_101072934	Not Available	504	Open in IMG/M
3300006052\|Ga0075029_100382094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	912	Open in IMG/M
3300006796\|Ga0066665_10543190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	946	Open in IMG/M
3300006806\|Ga0079220_11816608	Not Available	537	Open in IMG/M
3300006914\|Ga0075436_100555244	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	843	Open in IMG/M
3300007258\|Ga0099793_10165791	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1051	Open in IMG/M
3300007265\|Ga0099794_10202312	Not Available	1017	Open in IMG/M
3300009038\|Ga0099829_10561877	Not Available	948	Open in IMG/M
3300009038\|Ga0099829_10602578	Not Available	913	Open in IMG/M
3300009038\|Ga0099829_11610896	Not Available	536	Open in IMG/M
3300009088\|Ga0099830_10615450	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300009088\|Ga0099830_10901950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300009088\|Ga0099830_11812942	Not Available	510	Open in IMG/M
3300009089\|Ga0099828_10868217	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300009090\|Ga0099827_10127480	All Organisms → cellular organisms → Bacteria	2057	Open in IMG/M
3300009137\|Ga0066709_100089189	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3722	Open in IMG/M
3300009143\|Ga0099792_10602485	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300010320\|Ga0134109_10290303	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300010343\|Ga0074044_10844448	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300010376\|Ga0126381_101720431	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300010398\|Ga0126383_10605510	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300011271\|Ga0137393_10186780	Not Available	1745	Open in IMG/M
3300011271\|Ga0137393_10249180	Not Available	1507	Open in IMG/M
3300011271\|Ga0137393_10926037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300012189\|Ga0137388_10319255	Not Available	1427	Open in IMG/M
3300012189\|Ga0137388_11938882	Not Available	518	Open in IMG/M
3300012205\|Ga0137362_10108697	All Organisms → cellular organisms → Bacteria	2342	Open in IMG/M
3300012205\|Ga0137362_11525055	Not Available	555	Open in IMG/M
3300012210\|Ga0137378_10728070	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300012351\|Ga0137386_10023735	All Organisms → cellular organisms → Bacteria	4157	Open in IMG/M
3300012351\|Ga0137386_10735049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300012361\|Ga0137360_11148425	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300012363\|Ga0137390_11024700	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300012363\|Ga0137390_11293964	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300012683\|Ga0137398_10795648	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300012918\|Ga0137396_10408732	Not Available	1006	Open in IMG/M
3300012923\|Ga0137359_11092232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300012931\|Ga0153915_11035406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300012960\|Ga0164301_10622108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300012971\|Ga0126369_12961604	Not Available	556	Open in IMG/M
3300015054\|Ga0137420_1193840	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300016445\|Ga0182038_11838316	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	547	Open in IMG/M
3300017823\|Ga0187818_10370268	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300017955\|Ga0187817_10312610	Not Available	1002	Open in IMG/M
3300017955\|Ga0187817_10766238	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300017974\|Ga0187777_10535028	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300018468\|Ga0066662_12058876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300019866\|Ga0193756_1008979	Not Available	1291	Open in IMG/M
3300020580\|Ga0210403_10121223	All Organisms → cellular organisms → Bacteria	2128	Open in IMG/M
3300021086\|Ga0179596_10209049	Not Available	952	Open in IMG/M
3300021088\|Ga0210404_10008858	All Organisms → cellular organisms → Bacteria	4079	Open in IMG/M
3300021088\|Ga0210404_10332711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300021178\|Ga0210408_10873613	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300021404\|Ga0210389_10813818	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300021433\|Ga0210391_10349914	Not Available	1159	Open in IMG/M
3300021433\|Ga0210391_10841253	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300021477\|Ga0210398_11520673	Not Available	520	Open in IMG/M
3300021478\|Ga0210402_11629032	Not Available	572	Open in IMG/M
3300021560\|Ga0126371_11932487	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300024271\|Ga0224564_1050903	Not Available	807	Open in IMG/M
3300024330\|Ga0137417_1121774	Not Available	1123	Open in IMG/M
3300024330\|Ga0137417_1121775	Not Available	1053	Open in IMG/M
3300025934\|Ga0207686_10339738	Not Available	1127	Open in IMG/M
3300026281\|Ga0209863_10076877	Not Available	984	Open in IMG/M
3300026315\|Ga0209686_1129382	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300026328\|Ga0209802_1019447	All Organisms → cellular organisms → Bacteria	3770	Open in IMG/M
3300026334\|Ga0209377_1324675	Not Available	515	Open in IMG/M
3300026371\|Ga0257179_1017866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300026469\|Ga0257169_1020172	Not Available	940	Open in IMG/M
3300026552\|Ga0209577_10719555	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300026555\|Ga0179593_1193815	All Organisms → cellular organisms → Bacteria	3667	Open in IMG/M
3300026557\|Ga0179587_10468100	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300026999\|Ga0207949_1016038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300027070\|Ga0208365_1030729	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300027603\|Ga0209331_1050619	Not Available	1051	Open in IMG/M
3300027643\|Ga0209076_1007970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2636	Open in IMG/M
3300027645\|Ga0209117_1121222	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300027862\|Ga0209701_10614125	Not Available	574	Open in IMG/M
3300027875\|Ga0209283_10506509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300027882\|Ga0209590_10065377	All Organisms → cellular organisms → Bacteria	2075	Open in IMG/M
3300027882\|Ga0209590_10411268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300027898\|Ga0209067_10677457	Not Available	596	Open in IMG/M
3300028536\|Ga0137415_10540394	Not Available	975	Open in IMG/M
3300028536\|Ga0137415_10715837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300031715\|Ga0307476_10509773	Not Available	891	Open in IMG/M
3300031720\|Ga0307469_10297485	Not Available	1327	Open in IMG/M
3300031754\|Ga0307475_10684540	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300031777\|Ga0318543_10137299	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300031962\|Ga0307479_10188817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2028	Open in IMG/M
3300031962\|Ga0307479_10641931	All Organisms → cellular organisms → Bacteria → Acidobacteria	1042	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.04%
Host-Associated	Host-Associated	1.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.24%
Aquatic	Environmental → Aquatic	9.80%
Plants	Host-Associated → Plants	1.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.24%
Freshwater	Environmental → Aquatic → Freshwater	4.90%
Sediment	Environmental → Aquatic → Sediment	4.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.49%
Loam	Environmental → Terrestrial → Soil → Loam	9.80%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.98%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.98%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	39.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.98%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.98%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.98%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.98%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026999	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_105822362	3300001593	Forest Soil	MLKRMLSPLLVLAMIGLPLPAQDKKETERLDNCGTVLKEILDIP
JGI12627J18819_104402472	3300001867	Forest Soil	MLKRLTSSVLVLAIAALPISRAGDTKETGRLENCGTVLKEI
JGI25617J43924_103266982	3300002914	Grasslands Soil	MISSLMALALAALPLLAARDNRKETDRLENCGAVIKEVMDI
Ga0062384_1010537771	3300004082	Bog Forest Soil	MRKQMVSSLLGLAMLAAPMAAQDKKEADRLQNCGTVLKEILDIPDD
Ga0066677_103678812	3300005171	Soil	MLTFLVVFSLVALPLTAKDSKKEADRMENCGTVLKEILDIPDD
Ga0066686_109853771	3300005446	Soil	VIKRMISSLMALALVALPLFGAGDKKETERLENCGSVVKEVMDI
Ga0070707_1017051442	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MLQRIMSSLLALAIAFPLAAEDKKKETDRLENCGLVLKEIL
Ga0073909_105189782	3300005526	Surface Soil	MLQRIMSSLLALAIALPLAAADNKKETDRLENCGLVL
Ga0066704_100987272	3300005557	Soil	VIQRMISTLVALALAALPLSAAEDQKEADRLDNCGTVLKEI
Ga0075028_1008358261	3300006050	Watersheds	VIKQMLACLMGLILAALPLSAANDKKETDRLDNCGMVI
Ga0075028_1010302301	3300006050	Watersheds	VIKRMISTLMTMALVALPLSAAGDRKETDRLENCGMI
Ga0075028_1010729342	3300006050	Watersheds	MKRMMSCLMALAMVALPLFAAKDKKETDRLENCGMVIKEVM
Ga0075029_1003820942	3300006052	Watersheds	VIKRMISTLMALTLVALPLLAAGDKKETDRLENCGMVVKEVMDIP
Ga0066665_105431901	3300006796	Soil	VIKRMLSSLVALALIALPLSAAKDIKETERRENCGTVLK
Ga0079220_118166081	3300006806	Agricultural Soil	MLKQLMSSVLALAIALPLAAADSKKETDRLENCGLI
Ga0075436_1005552441	3300006914	Populus Rhizosphere	MKKFAALLAAAVILAGPLAAASKDDKETDRLENCGMILKEIMDIPDDI
Ga0099793_101657911	3300007258	Vadose Zone Soil	MISYLMALALIAPPLLAARDKKETERLENCGMIVKEVM
Ga0099794_102023121	3300007265	Vadose Zone Soil	VIKRLISFLMTWALVALPLSAKEDKKETDRLDNCGTVLKEILD
Ga0099829_105618772	3300009038	Vadose Zone Soil	MKRTLSLFLAMALLALPLSAGDKNKKELDRLENCGTVLKEILDI
Ga0099829_106025781	3300009038	Vadose Zone Soil	MSSVLALAIALPLAAADNKKETERLENCGLVLKEILDIPDDIP
Ga0099829_116108962	3300009038	Vadose Zone Soil	MSLLAAFALIALPAGADNKKETERLDNCGTVLKEILDIPDDIPSDL
Ga0099830_106154501	3300009088	Vadose Zone Soil	MFSSLVALALIALPLSAAKDIKETERLENCGTVLKEIM
Ga0099830_109019501	3300009088	Vadose Zone Soil	MKRMISSLMALALIALPLSAAEDKKETDRLENCGTVLKEIMDIPD
Ga0099830_118129422	3300009088	Vadose Zone Soil	MSLLAAFALIALPAGADNKKETERLDNCGTVLKEILDIPDDIP
Ga0099828_108682171	3300009089	Vadose Zone Soil	MLKRMTSSLLTLALVALPLAAADNQKEVDRLENCGMVLKEILDIPDD
Ga0099827_101274803	3300009090	Vadose Zone Soil	MISSLMALALVALPLLAAGDKKETERLENCGMILK
Ga0066709_1000891892	3300009137	Grasslands Soil	MKRMGSFLCAFLLITLPLAAGDNKKEQDRLENCG*
Ga0099792_106024852	3300009143	Vadose Zone Soil	MLKRMTSSLVALALIALPLSAADNQKEVDRLENCGMVLKEILD
Ga0134109_102903031	3300010320	Grasslands Soil	MLTFLMVFSLVALPLTAKDSKKEADRLENCGTVLKEIL
Ga0074044_108444482	3300010343	Bog Forest Soil	MLKRILSPLLALAVIGLPLSAQVDKKEADRLDNCGTVMKE
Ga0126381_1017204312	3300010376	Tropical Forest Soil	MLTFLMAFSLVALPLTAKDSKKEADRLENCGTVLKEILD
Ga0126383_106055101	3300010398	Tropical Forest Soil	MACSLVALPLIAGKKETDRLDNCGTVLKEIIDIPEDIPSD
Ga0137393_101867802	3300011271	Vadose Zone Soil	VLKRLISLLVTWALVVLPLSAREDKKETERLDNCGTVL
Ga0137393_102491801	3300011271	Vadose Zone Soil	MISSLMSLAMVALPLSAAEEQKEADRLDNCGTVLKEILDIPD
Ga0137393_109260372	3300011271	Vadose Zone Soil	MISWVMAFAMVALPLSAAEDQKEADRLDNCGTVLKEILDIPD
Ga0137388_103192552	3300012189	Vadose Zone Soil	MLKRMTSSLLTLALVALPLAAADNQKEVDRLENCGMVLKEILDI
Ga0137388_119388821	3300012189	Vadose Zone Soil	MISSLMALALAALPLLAARDNRKETDRLENCGMIV
Ga0137362_101086971	3300012205	Vadose Zone Soil	VIKRMISSLTALALVASPLLGAGDRKETDRLENCGMVIK
Ga0137362_115250551	3300012205	Vadose Zone Soil	MWKQLMSSVLALAIALPLAAADSKKETDRLENCGLI
Ga0137378_107280701	3300012210	Vadose Zone Soil	MISFLMAFSLVALPLSADSKKEAERLDNCGTVLKEILDI
Ga0137386_100237354	3300012351	Vadose Zone Soil	VLKRLISLLVTWALVALPLSAREDKKETDRLDNCG
Ga0137386_107350491	3300012351	Vadose Zone Soil	MISTLVALALAAFPLSAAEDQKEADRLDNCGTALKEILDIPDN
Ga0137360_111484251	3300012361	Vadose Zone Soil	VLKRLTSLLMTWALVALPLSAKEDKKETDRLDNCGTVLK
Ga0137390_110247001	3300012363	Vadose Zone Soil	MLSPLLAMAMIGLPLSAAQEKKEADRLDNRGTVLKEILD
Ga0137390_112939641	3300012363	Vadose Zone Soil	MSSVLALAIALPLAAADNKKETERLENCGLVLKEILDIPDDI
Ga0137398_107956482	3300012683	Vadose Zone Soil	MSSLLALAIALPLAAADKKKEIDRLENCGQVLKEILDIPDDIP
Ga0137396_104087322	3300012918	Vadose Zone Soil	MLKRILSFLLALALIALPLSAADNKKEVDRLENCGMVLKEI
Ga0137359_110922322	3300012923	Vadose Zone Soil	MISSLTALALVASPLLGAGDRKETDRLENCGMVIKEVMDI
Ga0153915_110354062	3300012931	Freshwater Wetlands	VSKRILSLLTILALTVLPLSAEDKKETERLDNCGTVLKE
Ga0164301_106221082	3300012960	Soil	MLKRMLSLFVGLAMIGLPLSASDKKEADRLQNCGTVLKEILDIPDDI
Ga0126369_129616042	3300012971	Tropical Forest Soil	MLSPALALVILFLPLASAEDKKEADRLDNCGTVLKEILDIP
Ga0137420_11938401	3300015054	Vadose Zone Soil	MSSVLALAIALPLAAADKKKETDRLENCGQVLKEILDIPDDYSA
Ga0182038_118383161	3300016445	Soil	MKRMISLLMASSLVALPLTANDNKKETHRLENCGTVVKEILDIP
Ga0187818_103702682	3300017823	Freshwater Sediment	MKRSLSLLLAFSMTCLPLFADNKKETDRLDNCGMVLKEILDIP
Ga0187817_103126101	3300017955	Freshwater Sediment	LIKRIGSSLVALALMVLPLSAARDTKQTDRLENCGTV
Ga0187817_107662382	3300017955	Freshwater Sediment	MISALMGLALIGLPLLAADETKETDRLENCGTVIREIM
Ga0187777_105350281	3300017974	Tropical Peatland	MAISLAALPIMAAGDKKEADRLENCGTVIKEIMDIP
Ga0066662_120588761	3300018468	Grasslands Soil	VIKQMLSCLMALALVALPLSAAKDKKETERLENCGTVIKEVMDIPDDIPPDL
Ga0193756_10089792	3300019866	Soil	VIKRMISSLVALALVALPLLASGDKKETARLENCGLIVKEVMDIPDN
Ga0210403_101212233	3300020580	Soil	MALVLLAPGLLAAGDRKETERLENCGMVIKEVMDIPDNIPED
Ga0179596_102090491	3300021086	Vadose Zone Soil	MTKRIVVYLTALVLVSLPLAGAQDTKEADRLENCGTVLKEI
Ga0210404_100088581	3300021088	Soil	MLKPMMSSVLALAIALPLVAADSKKETDRLENCGLILKEILDIPDDIP
Ga0210404_103327112	3300021088	Soil	VIKRMISSLMALALIALPLLAAGDKKETERLENCGLIIKEVMDIP
Ga0210408_108736131	3300021178	Soil	MIKRLLSVLLAFSMASLPLCAADDKKEADRLDNCGTVLKEILDIPD
Ga0210389_108138181	3300021404	Soil	MRRMMVYLLALAMVGLPLFAAQDKKEADRLDNCGT
Ga0210391_103499142	3300021433	Soil	MKRMMVYLLALVMVSLPLFAGQDKKEADRLDNCGTVLQEILDIP
Ga0210391_108412532	3300021433	Soil	MMRRMMVYLLALAMVGLPLFAAQDKKEADRLDNCG
Ga0210398_115206731	3300021477	Soil	MKRIFSLMVALSMAGLPLSAGGDKKETDRLDNCGTVLREILDIPDDIP
Ga0210402_116290322	3300021478	Soil	VIKRMISSLVTMALVALPLSAAGDRKETDRLENCGMVIKEVM
Ga0126371_119324872	3300021560	Tropical Forest Soil	MLSLLMAFSLVALPLTAKDNKKEADRLENCGTVLKEI
Ga0224564_10509031	3300024271	Soil	LIERIIASLMTLGLIALPLSAAEEKKETDRLENCGTVMKEIMDIPD
Ga0137417_11217741	3300024330	Vadose Zone Soil	MLKQLMSSVLALAIALPLAAADSKKETDRLENCGLVLK
Ga0137417_11217752	3300024330	Vadose Zone Soil	MLKQLMSSVLALAIALPLAAADSKKETDRLENCGLVLKEILDI
Ga0207686_103397381	3300025934	Miscanthus Rhizosphere	MLKRMLSLLVALAMIGLPLSASDKKETDRLQNCGTVLKEILDIPDNI
Ga0209863_100768772	3300026281	Prmafrost Soil	MTKRIFVYLTALVMASLPLAAAQDTKEADRLDNCGTVVKEILDIPDD
Ga0209686_11293821	3300026315	Soil	MLTFLVVFSLVALPLTAKDSKKEADRMENCGTVLKEILDI
Ga0209802_10194474	3300026328	Soil	VIQRMISTLVALALVALPLSAADEQKEADRLDNCGTVLKEIL
Ga0209377_13246752	3300026334	Soil	VLKRLISFLMTWALVVLPLSAKEDNKKETDRLDNCGTVLKEI
Ga0257179_10178662	3300026371	Soil	VIKRMISYLMALALIALPLLAAGAKKETERLENCGMI
Ga0257169_10201722	3300026469	Soil	VIKQMMSCLMALALVALPLSAAKDKKETDRLDNCGTVIKE
Ga0209577_107195551	3300026552	Soil	VLKRMLCLLMAFSLVALPLTAKESKEAERLDNCGTVLKEI
Ga0179593_119381511	3300026555	Vadose Zone Soil	VIKRTISSLMALALVALPLLAAGDKKETERLENCGEVIK
Ga0179587_104681001	3300026557	Vadose Zone Soil	VIKRMISTQMALLLVALPLLASGDKKEVDRLENCGMVIKEV
Ga0207949_10160381	3300026999	Forest Soil	VFKRMISSLMALAMAALPLCAAGDQKEADRLDNCGTVLKE
Ga0208365_10307292	3300027070	Forest Soil	MKRMMVYLLALAMVGLPLHAAQDKKEADRLDNCGTVLKEILDIPDD
Ga0209331_10506192	3300027603	Forest Soil	MLKRVTSSLLALGLIALPLLAADNRKEVDRLENCGMVLKEILDIPDD
Ga0209076_10079704	3300027643	Vadose Zone Soil	VIKRISSSLMALALVALPLLAAGDKKETDRLENCGM
Ga0209117_11212222	3300027645	Forest Soil	MLKRMTCSLLALALVTLPLSAADNKKEVDRLENCGMVLKEILDIPDDI
Ga0209701_106141251	3300027862	Vadose Zone Soil	MKRMISSLMALALIALPLSAAEDKKETDRLENCGTVLK
Ga0209283_105065093	3300027875	Vadose Zone Soil	VLKRLISFLVTWALVALPLSAKEDKKETDRLDNCGT
Ga0209590_100653771	3300027882	Vadose Zone Soil	VIKRMISSLMALALVALPLLASGDKKETGRLENCGLIVKEVMDIP
Ga0209590_104112681	3300027882	Vadose Zone Soil	VIKRMFSSLLALALIALPLSAAKDIKETERLENCGSVLKEIMDIPDNI
Ga0209067_106774572	3300027898	Watersheds	MKRSFSLLLAFSMTCLPLVADDKKEADRLDNCGTVMK
Ga0137415_105403943	3300028536	Vadose Zone Soil	MTKRSLSLLLAFSMTSLPLSADNKKEADRLDNSGTVLKEIL
Ga0137415_107158372	3300028536	Vadose Zone Soil	VIKRMISSLMALALVALPLLAAGDKKETERLENCGEVIKEV
Ga0308309_100065211	3300028906	Soil	LIKKISSCLMALAMIAPPLLSQADKKEADRLENCGTVMKEIMDIPD
Ga0307476_105097731	3300031715	Hardwood Forest Soil	MLQRIMSTLLAITLALPLAVADSKKETDRLENCGLVLK
Ga0307469_102974852	3300031720	Hardwood Forest Soil	MLKRMLSLFVGLAMIGLPLSASDKKEADRLQNCGTVLKEILDIP
Ga0307475_106845401	3300031754	Hardwood Forest Soil	MRRMMVYLLALAMVGLPLFAAQDKKEADRLDNCGTVLKEILDI
Ga0318543_101372991	3300031777	Soil	VLKRILAVLMACSLVALPLIAGKKETDRLDNCGTVLKEIIDIP
Ga0307479_101888172	3300031962	Hardwood Forest Soil	MSYLVALVLIALPLSAADNKRETGRLENCGTVIKEIMDIPDDIPKDL
Ga0307479_106419312	3300031962	Hardwood Forest Soil	LIKRMMSYLVALVLIALPLSAADNKRETGRLENCGTVIKEIMDIPDDIPKDL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100791

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign