Metagenome / Metatranscriptome Family F100817

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F100817
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	100 residues
Representative Sequence	MIATLPTQEQVDQIARDLAPDVVRVRFNVAQDWSEDPAIYFRIVLSDEASRRDRLADVTGRVRRKFFDELRLAELDHIPYFRFRSQSEQAKLQERAWD
Number of Associated Samples	82
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	54.90 %
% of genes near scaffold ends (potentially truncated)	24.51 %
% of genes from short scaffolds (< 2000 bps)	77.45 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.85

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (92.157 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.510 % of family members)
Environment Ontology (ENVO)	Unclassified (29.412 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.098 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.71% β-sheet: 21.43% Coil/Unstructured: 42.86%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.85
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.85
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
d.52.6.1: BolA-like	d1iw5a1	1iw5	0.61834
d.80.1.2: 5-carboxymethyl-2-hydroxymuconate isomerase (CHMI)	d1otga_	1otg	0.60554
e.23.1.0: automated matches	d5gxda_	5gxd	0.60415
e.23.1.1: Acetyl-CoA synthetase-like	d1nnma_	1nnm	0.60054
d.218.1.2: DNA polymerase beta-like	d2fmpa3	2fmp	0.59979

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF03576	Peptidase_S58	3.92
PF01740	STAS	1.96
PF01909	NTP_transf_2	1.96
PF00005	ABC_tran	1.96
PF02452	PemK_toxin	1.96
PF01791	DeoC	1.96
PF00072	Response_reg	0.98
PF13561	adh_short_C2	0.98
PF00196	GerE	0.98
PF13432	TPR_16	0.98
PF01979	Amidohydro_1	0.98
PF07626	PSD3	0.98
PF00856	SET	0.98
PF00571	CBS	0.98
PF16326	ABC_tran_CTD	0.98
PF01546	Peptidase_M20	0.98
PF00665	rve	0.98
PF02350	Epimerase_2	0.98
PF08327	AHSA1	0.98
PF00128	Alpha-amylase	0.98
PF13517	FG-GAP_3	0.98
PF01408	GFO_IDH_MocA	0.98
PF08867	FRG	0.98
PF00664	ABC_membrane	0.98
PF00574	CLP_protease	0.98
PF02518	HATPase_c	0.98
PF12704	MacB_PCD	0.98
PF00590	TP_methylase	0.98
PF07883	Cupin_2	0.98
PF00857	Isochorismatase	0.98
PF01380	SIS	0.98
PF13924	Lipocalin_5	0.98
PF04295	GD_AH_C	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG3191	L-aminopeptidase/D-esterase	Amino acid transport and metabolism [E]	7.84
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.96
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	1.96
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	1.96
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.98
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.98
COG0381	UDP-N-acetylglucosamine 2-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.98
COG0707	UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase	Cell wall/membrane/envelope biogenesis [M]	0.98
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.98
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.98
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.98
COG2721	Altronate dehydratase	Carbohydrate transport and metabolism [G]	0.98
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.98
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.98
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	0.98
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.98
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.16 %
Unclassified	root	N/A	7.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.16 %
Unclassified	root	N/A	7.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.16 %
Unclassified	root	N/A	7.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	73.53 %
Unclassified	root	N/A	7.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	59.80 %
Unclassified	root	N/A	7.84 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	52.94 %
Unclassified	root	N/A	7.84 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.94 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	1.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.98 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.98 %

Name	Rank	Taxonomy	Distribution
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	51.96 %
Unclassified	root	N/A	7.84 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.94 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	1.96 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	48.04 %
Unclassified	root	N/A	7.84 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	3.92 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.94 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	32.35 %
Unclassified	root	N/A	7.84 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3.92 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.94 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	16.67 %
Candidatus Sulfopaludibacter sp. SbA6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	15.69 %
Unclassified	root	N/A	7.84 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.94 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.96 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.98 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.98 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908041\|P3_CLC_ConsensusfromContig142419	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	1642	Open in IMG/M
3300001593\|JGI12635J15846_10706057	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	581	Open in IMG/M
3300004139\|Ga0058897_10485687	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	744	Open in IMG/M
3300004478\|Ga0068972_1489193	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	820	Open in IMG/M
3300005174\|Ga0066680_10799561	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	568	Open in IMG/M
3300005437\|Ga0070710_10378098	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300005439\|Ga0070711_101755544	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300005447\|Ga0066689_10943548	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	532	Open in IMG/M
3300005454\|Ga0066687_10433736	Not Available	766	Open in IMG/M
3300005591\|Ga0070761_10622668	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300005640\|Ga0075035_1605865	All Organisms → cellular organisms → Bacteria	2376	Open in IMG/M
3300005713\|Ga0066905_101173815	Not Available	685	Open in IMG/M
3300005944\|Ga0066788_10003523	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3089	Open in IMG/M
3300006795\|Ga0075520_1326911	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	627	Open in IMG/M
3300006796\|Ga0066665_10601438	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	884	Open in IMG/M
3300006800\|Ga0066660_10879091	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300006893\|Ga0073928_10315434	All Organisms → cellular organisms → Bacteria → Acidobacteria	1169	Open in IMG/M
3300006893\|Ga0073928_10628340	All Organisms → cellular organisms → Bacteria → Acidobacteria	756	Open in IMG/M
3300006893\|Ga0073928_10778070	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	663	Open in IMG/M
3300009012\|Ga0066710_104533173	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	519	Open in IMG/M
3300009029\|Ga0066793_10075067	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	1939	Open in IMG/M
3300009029\|Ga0066793_10729064	Not Available	563	Open in IMG/M
3300009088\|Ga0099830_11461986	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	569	Open in IMG/M
3300009089\|Ga0099828_11182577	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	678	Open in IMG/M
3300009521\|Ga0116222_1350060	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300009628\|Ga0116125_1160546	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	626	Open in IMG/M
3300009661\|Ga0105858_1006727	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3388	Open in IMG/M
3300009686\|Ga0123338_10001559	All Organisms → cellular organisms → Bacteria	22212	Open in IMG/M
3300009695\|Ga0123337_10009667	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8589	Open in IMG/M
3300009698\|Ga0116216_10147955	All Organisms → cellular organisms → Bacteria → Proteobacteria	1444	Open in IMG/M
3300009787\|Ga0116226_10106596	All Organisms → cellular organisms → Bacteria	2899	Open in IMG/M
3300010046\|Ga0126384_11136696	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	718	Open in IMG/M
3300010331\|Ga0123336_10004783	All Organisms → cellular organisms → Bacteria	10899	Open in IMG/M
3300010341\|Ga0074045_10048872	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3073	Open in IMG/M
3300010379\|Ga0136449_101563308	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	1005	Open in IMG/M
3300011083\|Ga0138560_1144251	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	845	Open in IMG/M
3300011120\|Ga0150983_10896631	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	840	Open in IMG/M
3300011120\|Ga0150983_11131529	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	605	Open in IMG/M
3300011269\|Ga0137392_10229355	All Organisms → cellular organisms → Bacteria	1525	Open in IMG/M
3300011269\|Ga0137392_10869018	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	743	Open in IMG/M
3300011269\|Ga0137392_11582465	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	514	Open in IMG/M
3300011270\|Ga0137391_10981503	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	688	Open in IMG/M
3300011270\|Ga0137391_11209887	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	603	Open in IMG/M
3300012189\|Ga0137388_10331660	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300012202\|Ga0137363_10066395	All Organisms → cellular organisms → Bacteria	2639	Open in IMG/M
3300012205\|Ga0137362_11615533	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	535	Open in IMG/M
3300012210\|Ga0137378_10290500	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	1521	Open in IMG/M
3300012210\|Ga0137378_11754439	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	526	Open in IMG/M
3300012211\|Ga0137377_10078900	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3095	Open in IMG/M
3300012212\|Ga0150985_118760152	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	804	Open in IMG/M
3300012349\|Ga0137387_10419190	All Organisms → cellular organisms → Bacteria → Acidobacteria	971	Open in IMG/M
3300012683\|Ga0137398_10059178	All Organisms → cellular organisms → Bacteria	2300	Open in IMG/M
3300012917\|Ga0137395_10685521	Not Available	741	Open in IMG/M
3300012923\|Ga0137359_10616428	All Organisms → cellular organisms → Bacteria → Acidobacteria	951	Open in IMG/M
3300012923\|Ga0137359_10651459	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	921	Open in IMG/M
3300012925\|Ga0137419_11230148	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	628	Open in IMG/M
3300012925\|Ga0137419_11527045	Not Available	566	Open in IMG/M
3300012929\|Ga0137404_10474634	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1113	Open in IMG/M
3300012944\|Ga0137410_11926531	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	524	Open in IMG/M
3300012948\|Ga0126375_10176449	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	1377	Open in IMG/M
3300014489\|Ga0182018_10115099	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
3300014489\|Ga0182018_10569158	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	596	Open in IMG/M
3300014501\|Ga0182024_10015935	All Organisms → cellular organisms → Bacteria → Acidobacteria	14316	Open in IMG/M
3300014501\|Ga0182024_10036720	All Organisms → cellular organisms → Bacteria → Acidobacteria	8199	Open in IMG/M
3300014501\|Ga0182024_10461887	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1625	Open in IMG/M
3300015069\|Ga0167633_100038	All Organisms → cellular organisms → Bacteria → Acidobacteria	71246	Open in IMG/M
3300015193\|Ga0167668_1053545	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	838	Open in IMG/M
3300015196\|Ga0167627_1033083	All Organisms → cellular organisms → Bacteria → Acidobacteria	1745	Open in IMG/M
3300015204\|Ga0167626_1122963	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	594	Open in IMG/M
3300015264\|Ga0137403_10077007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3375	Open in IMG/M
3300017948\|Ga0187847_10334511	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	829	Open in IMG/M
3300017948\|Ga0187847_10408588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300017955\|Ga0187817_10827749	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	591	Open in IMG/M
3300018034\|Ga0187863_10132941	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	1389	Open in IMG/M
3300018062\|Ga0187784_10773668	Not Available	767	Open in IMG/M
3300019240\|Ga0181510_1232401	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	563	Open in IMG/M
3300020199\|Ga0179592_10397190	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	602	Open in IMG/M
3300021477\|Ga0210398_10261835	All Organisms → cellular organisms → Bacteria → Acidobacteria	1409	Open in IMG/M
3300022561\|Ga0212090_10110462	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2599	Open in IMG/M
3300025916\|Ga0207663_10622889	Not Available	850	Open in IMG/M
3300026214\|Ga0209838_1046338	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	637	Open in IMG/M
3300026281\|Ga0209863_10002232	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	7077	Open in IMG/M
3300026320\|Ga0209131_1031473	All Organisms → cellular organisms → Bacteria → Acidobacteria	3106	Open in IMG/M
3300026555\|Ga0179593_1059121	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2986	Open in IMG/M
3300027745\|Ga0209908_10247040	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	502	Open in IMG/M
3300027905\|Ga0209415_10289433	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	1426	Open in IMG/M
3300029636\|Ga0222749_10572584	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	616	Open in IMG/M
3300029912\|Ga0247050_1050302	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1236	Open in IMG/M
3300030494\|Ga0310037_10124305	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300031090\|Ga0265760_10107979	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300031234\|Ga0302325_10033412	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	10539	Open in IMG/M
3300031234\|Ga0302325_10265486	All Organisms → cellular organisms → Bacteria	2836	Open in IMG/M
3300031234\|Ga0302325_11187991	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	1016	Open in IMG/M
3300031234\|Ga0302325_11348075	All Organisms → cellular organisms → Bacteria → Acidobacteria	933	Open in IMG/M
3300031525\|Ga0302326_10427085	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	2042	Open in IMG/M
3300031525\|Ga0302326_12744485	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	610	Open in IMG/M
3300031708\|Ga0310686_109707249	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300031708\|Ga0310686_117185853	All Organisms → cellular organisms → Bacteria	9345	Open in IMG/M
3300032160\|Ga0311301_12475602	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	582	Open in IMG/M
3300032515\|Ga0348332_10500738	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	519	Open in IMG/M
3300032515\|Ga0348332_11832311	Not Available	514	Open in IMG/M
3300033405\|Ga0326727_11161682	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	542	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.04%
Host-Associated	Host-Associated	1.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.31%
Aquatic	Environmental → Aquatic	13.73%
Plants	Host-Associated → Plants	1.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.49%
Freshwater	Environmental → Aquatic → Freshwater	10.78%
Peat	Environmental → Terrestrial → Peat	6.86%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.94%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.98%
Peat Moss	Host-Associated → Plants → Peat Moss	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.71%
Loam	Environmental → Terrestrial → Soil → Loam	8.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.86%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.88%
Ice	Environmental → Aquatic → Freshwater → Ice	4.90%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.94%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.20%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	12.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.86%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.92%
Glacier	Environmental → Aquatic → Freshwater → Ice → Glacier	3.92%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.98%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.98%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.51%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.84%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.92%
Glacier Valley	Environmental → Aquatic → Freshwater → Ice → Glacier → Glacier Valley	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.92%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.94%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.94%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	2.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.96%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.96%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.96%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.98%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.98%
Cryconite	Environmental → Aquatic → Freshwater → Ice → Unclassified → Cryconite	0.98%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.98%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Glacier Forefield Soil	0.98%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.98%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.98%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.98%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.98%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.98%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908041	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004478	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005640	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_052 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300009686	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - groundupSSSS metaG	Environmental	Open in IMG/M
3300009695	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - frozenSSSS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010331	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - ?SSSS metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011083	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 45 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015069	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4C, Ice margin, adjacent to proglacial lake	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015196	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G2C, Ice surface)	Environmental	Open in IMG/M
3300015204	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G2B, Ice surface)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019240	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022561	Borup_combined assembly	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029912	Cryconite microbial communities from ice sheet in Kangerlussuaq, Greenland - KAN_P-A3a	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P3_CLC_01021060	2124908041	Soil	MIATLPTQEQVDRIAHELAPDVVRIRFKVAKDWSEDPAVYFRVILSDEASRRDRLADVTGLVRGKLFDELRLDELDHMSYFRFRSWSEQTTLRDPAWE
JGI12635J15846_107060572	3300001593	Forest Soil	MIVALPTQQDVDRVARELAPDVVRIRFNVAQDWSEHTAIYFRVILSDEASRPERLADITGKVRGRLFDELGLANLDHIPYFKFRSQSEQAKLQEKAWA*
Ga0058897_104856871	3300004139	Forest Soil	QEEVDRIARDLAPDVVHIRLNVAQDWSADPALYFRVILSDEASRRDRLADVAGRVRGRLTDELGLDELDHFPYFRFRSQSEQARMQDEAWG*
Ga0068972_14891933	3300004478	Peatlands Soil	ERVDEIARALAPDVVRIRLSVAQDWSEHPAIYFRVILSDEASRGDRLADTAGKVRRKLFEELGLAAMDQIPYFRFRSQSEQAKLRDKAWD*
Ga0066680_107995611	3300005174	Soil	MIATLPTQEQVDQIARDLAPDVVRVRFNVAQDWSEDPAIYFRIVLSDEASRRDRLADVTGRVRRKFFDELRLAELDHIPYFRFRSQSEQAKLEERAWD*
Ga0070710_103780982	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MYPKLRCLVITTLPTQEQVDQIAHELAPDVVHIRMRVGHDWSEHPAIYFRVILSDEASQRDRLLEIIQRVRGKVRDELGFDALEHHPYFRFRSQSEQAQLRDPAWE*
Ga0070711_1017555441	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	APDVVHIRMRVGHDWSEHPAIYFRVILSDEASQRDRLLEIIQRVRGKVRDELGFDALEHHPYFRFRSQSEQAQLRDPAWE*
Ga0066689_109435482	3300005447	Soil	MIATLPTQAQVDRIARDLAPDVVRIRLNISQDWSNDPAIYFRVILSDEASRGDRLADVAARVRSKLFDELRLDELDHYPYFRFRSQSEQSKLREKAWD*
Ga0066687_104337362	3300005454	Soil	VISTLPTQEQVDRIVQDLAPDVVHIRMRVGHDWSEHPAIYFRVILSDEASQRDRLLEITQRVRGRVRNELGLDDLEHFPYFRFRSQSDQAQLRDPAWE*
Ga0070761_106226682	3300005591	Soil	MIATLPTQEQVDRIARDLAPDVVRIRLNIRHDWSGDPALYFRVILSDEASRRERLAQVTDRVRASLSNELRLASLEHIPYFRFRSQSEQAAMREKAWD*
Ga0075035_16058652	3300005640	Permafrost Soil	MIATLPTQGQVDQIARDLAPDVVRIRWQAGQDWSEHPAIYFRIVLSDEASRAERLAEVTGTVSARLFDSLGLSDSDRIPYFRFRSQGEQAKVGEAAWE*
Ga0066905_1011738152	3300005713	Tropical Forest Soil	MTATLPTQEQVDRIALDLAPDVVRIRLNIARDWSGDPAIYFRVILSDEASRRDRLAGTTERVREKLSEDLRLDELDHLPYFKFRSVSEQANLKERAWE*
Ga0066788_100035233	3300005944	Soil	MIAALPTQEQVDQIARTLAPDVVRIRLNVWHDWSGDPAIYFRSVLSDEAARERLAEVAERVRQELRARLGLDDLEHISYFRFRTQSEQAVLKEKSWD*
Ga0075520_13269111	3300006795	Arctic Peat Soil	QEGLLAGTSTSRTSPPAVYTVNRCLVIAALPTQEQVDRIARDLAPDVVHVRLDVGQDWSDDPAIYFRVILSDEASRGDRLSEVTGLVRERLSEELRLAELEHIPYFRFRNRSEQAKLREPAWD*
Ga0066665_106014383	3300006796	Soil	PTQAQVDRIARDLAPDVVRIRLNISQDWSNDPAIYFRVILSDEASRGDRLADVAARVRSKLFDELRLDELDHYPYFRFRSQSEQSKLREKAWD*
Ga0066660_108790912	3300006800	Soil	VITTLPTQEQVDRIASELAPDVVHIRMRVGHDWSEHPAIYFRVILSDEASQRDRLLEITQRVRGRVRNELGLDELEHFPYFRFRSQSEQAQLRDPAWE*
Ga0073928_103154341	3300006893	Iron-Sulfur Acid Spring	MIAAIPTQEDVNLVARELAPDVVRIRFRIAEDWSGHPAMYFRVILSDEVSWDRLEDVTGRVKEKVFDELGLAALAHIPYFRFRSESEQATLQDAAWD*
Ga0073928_106283402	3300006893	Iron-Sulfur Acid Spring	MPIATWEEQVAQIARELAPDVIRIRFRVAEDWSEHPAVYFRVVLSDAASRLDRLADVTGRVATKLSDELGLSKSDLIPYFRFRSESEQAELKDKAWD*
Ga0073928_107780701	3300006893	Iron-Sulfur Acid Spring	MIAALPTQQDVDRVARELAPDVVRIRFNVAQDWSEHAAIYFRVILSDEASRPERLADITGKVRGRLFDELGLANLDHIPYFKFRSQSEQAKLQEKAWA*
Ga0066710_1045331732	3300009012	Grasslands Soil	MIATLPTQEQVDQIARDLAPDVVRVRFNVAQDWSEDPAIYFRIVLSDEASRRDRLADVTGRVRRKFFDELRLAELDHIPYFRFRSQSEQAKLQERAWD
Ga0066793_100750673	3300009029	Prmafrost Soil	MIATLPTQEQVDQIAHELAPDVVRIRFKVAKDWSEDPAVYFRVILSDEAARRDRLADVTELVREKLSDQLRLDELDHMSYFRFRSWSEQTTLRDPAWE*
Ga0066793_107290641	3300009029	Prmafrost Soil	MIATLPTQEQVDRIARELAPDVVRIRFKVAKDWSEDPAFYFRVILSDEASRRDRLADVTGLVREKLSDELRLAELDHISYFRFRSQSEQTTLRDTAW
Ga0099830_114619861	3300009088	Vadose Zone Soil	MIAILPTQEQVDQIARDLAPEVVRVRLNIAQDWSEDPAIYFRIILSDEASRRDRLADVTSRVRRKFWDELRLAELDHIPYFRFRSQSEQDKLQEKAWD*
Ga0099828_111825772	3300009089	Vadose Zone Soil	MLAALPTQEQVDRVARSLAPDVVRIRFIESRDWSDDPALYFRVILSDEASHRDRLGEVAARVRERVEDELRLDELDHISYFNFRSQSEQAELNDPACA*
Ga0116222_13500601	3300009521	Peatlands Soil	MIATLPTQERVDEIARALAPDVVRIRLSVAQDWSEHPAIYFRVILSDEASRGDRLADTAGKVRRKLFEELGLAAMDQIPYFRFRSQSEQAKLRDKAWD*
Ga0116125_11605461	3300009628	Peatland	MIAALPTQEQVDRIACELAPDVVRIRLNVALDWSGDPAMYFRVILSDEASREDRLAEITGRVSGRLFDDLGLAKMDHIPYFRFRSQSEQTKLQEKAWD*
Ga0105858_10067274	3300009661	Permafrost Soil	MIATLPTQGQVDQIARDLAPDVVRIRWQAGQDWSEHPAIYFRIVLSDEASRAERLAEVTGTVSARLFDSLGLSDSDRIPYFRFRSQGEQANVGEAAWE*
Ga0123338_1000155913	3300009686	Glacier Valley	MDEVVWLASAHMIATLPSQQRIDEIATELAPDVVRIRSNVAPDWSEHPAIYIRVLLADDASRGDRLADVTGRIGTKLFEELGLASLDHIPYFRFRSQSEQARLKDAA*
Ga0123337_100096672	3300009695	Glacier Valley	MDEVVWLASAHMIATLPSQQRIDEIATELAPDVVRIRSNVAPDWSEHPAIYIRVLLADDASRGDRLADVTGRIGTKLFDEFGLASLDHIPYFRFRSQSEQARLKDAA*
Ga0116216_101479552	3300009698	Peatlands Soil	MIATLPTQERVDEIARALAPDVVRIRLSVAQDWSEHPAIYFRVILSDEASRGDRLADTAGKVRRKLFEELGLAAIDHFPYFRFRSQSEQAKLRDKAWD*
Ga0116226_101065963	3300009787	Host-Associated	MQQRLDELATELAPDVIRIRVNEAPDWSEHPAIYFRVVLADNASRRDRLFDVTGRVREKLFDKLGLESLDRIPYFRFRSQSEQLQLQDPAWE*
Ga0126384_111366962	3300010046	Tropical Forest Soil	MTATLPTQEQVDRIALDLAPDVVRIRLNIARDWSGDPAIYFRVILSDEASRRDRLAGTTERVREKLSEDLRLDELDHLPYFKFRSLSEQANLKEKAWD*
Ga0123336_100047834	3300010331	Glacier Valley	MDEVVWLASAHMITTLPSQQRIDEIATELAPDVVRIRSNVAPDWSEHPAIYIRVLLADDASRGDRLADVTGRIGTKLFDEFGLASLDHIPYFRFRSQSEQARLKDAAWE*
Ga0074045_100488722	3300010341	Bog Forest Soil	VIATLPTQEQVDRVASGLAPDVVHIRFSTGRDWSEHPAFYFRVILSDEASRKERLADVTGVVRARISEDLRLAELEYIPYFRFRSQSEQAKLHEEAWD*
Ga0136449_1015633082	3300010379	Peatlands Soil	MIATLPTKDQVDRIARDLAPDVVRIRFNVGQDWSEDPAIYFRVVLSDDASRLDRLAHVTGVVRGRLFDELELSKSDHMPYIRFRSQGEQAKLREAAWE*
Ga0138560_11442512	3300011083	Peatlands Soil	LMIATLPTQERVDEIARALAPDVVRIRLSVAQDWSEHPAIYFRVILSDEASRGDRLADTAGKVRRKLFEELGLAAMDQIPYFRFRSQSEQAKLRDKAWD*
Ga0150983_108966311	3300011120	Forest Soil	LNSGAFMIAALPTQGDVDRIARDLAPDVVHIRLNVAQDWSADPALYFRVILSDEASRRDRLADVAGRVRGRLTDELGLDELDHFPYFRFRSQSEQARMQDEAWG*
Ga0150983_111315292	3300011120	Forest Soil	ILKQGARMIAALPTQEQVDQIARALAPDVVYVRFNVSHDWSGDPAIYFRVLLSDEAASHRERLVEVAGRVRQALSDGLGLAELDHISYFHFRTQSEQAGLREKAWD*
Ga0137392_102293552	3300011269	Vadose Zone Soil	VITTLPTQEQVDRIASELAPDVVHIRMRVGHDWSEHPAIYFRVVLSDEASQRDRLLEIIQRVRGKVRDELGFDTLEHYPYFRFRSQSEQAQLRDPAWE*
Ga0137392_108690182	3300011269	Vadose Zone Soil	VIVTLPTQEQVDQIARELAPDVVRIRYSAGQDWSEDPAVYFRVILSDEASRRGRLAEVTELVRARLSDELRLAELEHIPYFRFRSQSEQAKLHDPVWDQPGSTAISGSSRHE*
Ga0137392_115824652	3300011269	Vadose Zone Soil	MIATLPTQEQVDRIARDLAPDVVRVRFNVAQDWSEDPAIYFRIILSNEASRRDGLADVTSRVRRKFFDELRLAELDHIPYFRFRNQSEQAKLQERSWD*
Ga0137391_109815031	3300011270	Vadose Zone Soil	MIATLPTQAQVDRIARDLAPDVVRIRLNISQDWSNDPAIYFRVILSDEASRGDRLADVAARVRSKLFDELRLDELDHISYFRFRSQSEQSELREKAWD*
Ga0137391_112098872	3300011270	Vadose Zone Soil	ILTIGAFMIATLPTQAQVDRIARDLAPDVVRVRLNISHDWSNDPAIYFLVVLSDEASQEDRLADVAGRVRSKFFDELRLAELDHIPYFRFRSQSEQSELREKAWD*
Ga0137388_103316602	3300012189	Vadose Zone Soil	MIAALVTQEQVDRIARELAPDVVRIRFNVARDWSEHPAIYFRVILSDEAGRKERLAEVTGRVSGMLFDELGLAGMDHIPYFRFRSQSEQAKLQEKAWA*
Ga0137363_100663954	3300012202	Vadose Zone Soil	VITTLPTQEQVDRIASDLAPDVVHIRMRVGHDWSEHPAIYFRVILSDEASRRERLLEITQRVRGRVRNELGLDDLEHFPYFRFRSQSEQAQLRDPAWE*
Ga0137362_116155332	3300012205	Vadose Zone Soil	MIATLPTQAQVDRIARDLAPDVVRVRLNISHDWSNDPAIYFRVILSDEASRGDRLADVAARVRSKLFDELRLDELDHYPYFRFRSQSEQTKLREKAWD*
Ga0137378_102905002	3300012210	Vadose Zone Soil	VIATLPTQEQVDRIARDLAPDVVRIRFNVGQDWSEHPAVYFRVILSDEASRSDRLPDVTGLVSGKLFDELRLAGLEHIPYFKFRSQSEQAKLHDTAWD*
Ga0137378_117544392	3300012210	Vadose Zone Soil	MIATLPTQAQVDRIARDLAPDVVRIRLNISQDWSNDPAIYFRVILSDEASRGDRLADVAARVRSKLFDELRLDELDHYPYFRFRSQSEQ
Ga0137377_100789004	3300012211	Vadose Zone Soil	MIATLPTQAQVDRIARDLAPDVVRVRLNISHDWSNDPAIYFRVILSDEASRGDRLADVAARVRSKLFDELRLDELDHYPYFRFRSQSEQSKLREKAWD*
Ga0150985_1187601521	3300012212	Avena Fatua Rhizosphere	ERICQIVKDLAPDVIRIRFNVGHDWSEHPAVYFRVILSDAASRPDRLAEVTGKVAGHLFDELRLSESDLIPYFRFRSQSEQAKLRDEAWD*
Ga0137387_104191902	3300012349	Vadose Zone Soil	MIATLPTQAQVDRIARDLAPDVVRIRLNISQDWSNDPAIYFRVILSDEASQGDRLADVAGRVRSKLIDELRLDELDHISYFRFRSQSEQSELREKAWD*
Ga0137398_100591783	3300012683	Vadose Zone Soil	VYPELRCLVITTLPTQEQVDRIASDLAPDVVHIRMRVGHDWSEHPAIYFRVILSDEASRRERLLEITQRVRGRVRNELGLDDLEHFPYFRFRSQSEQAQLRDPAWE*
Ga0137395_106855212	3300012917	Vadose Zone Soil	VITTLPTQEQVDRIASELAPDVVHIRMRVGHDWSEHPAIYFRVILSDEASQRDRLLEAIQRVRGKVRDELGFDTLEHYPYFRFRSQSEQAQLRDPAWE*
Ga0137359_106164281	3300012923	Vadose Zone Soil	VITTLPTQEQVDRIAGELAPDVVHIRMRVGHDWSEHPAIYFRVILSDEASQRDRLLEIIQRVRGKVRTELGLDELEHFPYFRFRSQSEQAQLRDPAWE*
Ga0137359_106514591	3300012923	Vadose Zone Soil	MIATLPTQAQVDRIARDLAPDVVRIRLNISQDWSNDPAIYFRVILSDEASRGDRLADVAGRVRSKLIDELRLDELDHISYFRFRSQSEQSEL
Ga0137419_112301482	3300012925	Vadose Zone Soil	SLIVRRLQCRRDLSITEIASSAGQCILKTGPFMIATLPTQEQVDRIALDLAPDVVRIRLNIAQDWSGDPAIYFRVILSDEASQRDRLAGTAERVRDKLSGDLRLDELDHLPYFKFRSQSEQANLKERAWD*
Ga0137419_115270451	3300012925	Vadose Zone Soil	VYPELRRLVITTLPTQEQVDRIASDLAPDVVHIRMRVGHDWSEHPAIYFRVILSDEASRRDRLREITELVREKVYNELGFAGLDHIPYVRFRSQSEQAKMHGTAWD*
Ga0137404_104746342	3300012929	Vadose Zone Soil	VYPELRRLVITTLPTQEQVDRIASDLAPDVVHIRMRVGHDWSEHPAIYFRVILSDEASRRERLLEITQRVRGRVRNELGLDDLEHFPYFRFRSQSEQAQLRDPAWE*
Ga0137410_119265312	3300012944	Vadose Zone Soil	MIATLPTQEQVDRIALDLAPDVVRIRLKIAQDWSGDPALYFRVILSDEASRRDRLAGTTARVEERLSDDLRLDELDHLPYFKFRSLSEQANLRERSWD*
Ga0126375_101764491	3300012948	Tropical Forest Soil	LKTGPFMTATLPTQDQVDRIALDLAPDVVRIRLNIARDWSGDPAIYFRVILSDEASRRDRLAGTTERVREKLSEDLRLDELDHLPYFKFRSLSEQANLKEKAWD*
Ga0182018_101150991	3300014489	Palsa	MIVTLPTQEQVDRIARDLAPDVVRIRLNVRHDWSGEPALYFRVILSDEASRRERLSEVTGRVRALLSDKLRLDGLEHIPYFRFRSQSEQANLQEKAWD*
Ga0182018_105691581	3300014489	Palsa	DRIARDLAPDVVRIRIDVKPDWNENSAIYFRVTMSDEASRKDRLWDATELVRAKLFDELRLEELDHQPYFNFRSNSEQAELQDPAWA*
Ga0182024_1001593510	3300014501	Permafrost	MTATLPTQEQVDRIARDLAPDVVRIRIDVKPDWNENSAIYFRVTMSDEASRKDRLWDATELVRAKLFDELRLEELDHQPYFNFRSNSEQAELQDPAWA*
Ga0182024_100367202	3300014501	Permafrost	MTATLPTQALVDRIARDLAPDVVRIRLDVTPDWTGDPALYFRVTLSDEASRRRPLLDVTGLVRAKVAEELRLEELDHHPYFRFRSYSEQAKLQDPAWA*
Ga0182024_104618871	3300014501	Permafrost	MIATLRTQEQVDRIARDLAPDVVRIRLDVTTDWTGDPALYFRVTLSDEASRRRPLRDVTGLVRAQVAEELRLEELDHHPYFSFRSYSEQAKLQDPAWA*
Ga0167633_10003832	3300015069	Glacier Forefield Soil	VITTLPTQEQVDRVASDLAPDVVHIRMRVGHDWSEHPAIYFRVILSDEASRRERLLEIIQRVRKMVRNELGLDELEHLPYFRFRSQSEQAQLRDPAWE*
Ga0167668_10535452	3300015193	Glacier Forefield Soil	VYSGERCLVIASLPTQEQVDRIARELAPDVVHIRMDVGHDWSEHPAIYFRVILSDEASQRDRLLEIILRVQRKVRDELGFAELDHIPYFRFRSHSEQAQLHDPAWE*
Ga0167627_10330833	3300015196	Glacier Forefield Soil	MDEVVWLATAHMITTLPSQQRIDEIATELAPDVVRIRSNVAPDWSEHPAIYIRVLLADDASLGDRLADVTGRIGTKLFEELGLASLDHIPYFRFRSQSEQARLKDAAWE*
Ga0167626_11229631	3300015204	Glacier Forefield Soil	SAHMIATLPSQQRIDEIATELAPDVVRIRSNVAPDWSEHPAIYIRVLLADDASLGDRLADVTGRIGTKLFEELGLASLDHIPYFRFRSQSEQARLKDAA*
Ga0137403_100770071	3300015264	Vadose Zone Soil	MIATLPTQEQVDEIACDLAPDVVRVRLNVAQDWSEDPAIYFRIILSDEASRRDRLADVTSRVRRKFGDELRLAELDHIPYFRFRSQSEQAKLQERAWD*
Ga0187847_103345111	3300017948	Peatland	ASGCDQGGVSMIATLPTQEQVDRIASGLAPDVVHIRFSTGRDWSEHPAFYFRVILSDKASRKERLADVTGLVRARISEDLRLAELEYIPYFRFRSQSEQARLQEEAWG
Ga0187847_104085881	3300017948	Peatland	MIAALPTQEQVDRIACELAPDVVRIRLNVALDWSGDPAMYFRVILSDEASREDRLAEITGRVSGRLFDDLGLAKMDHIPYFR
Ga0187817_108277491	3300017955	Freshwater Sediment	MIATLPTKEQVDRVARDLAPDVVRIRFNIGQDWTEHPAIYFRVVLSEDASRLDRLAHVTEVVRGRLFDDLELSKSDHIPYFRFRSQSEQAKLREAAWE
Ga0187863_101329413	3300018034	Peatland	MIAALPTQEQVDRIACELAPDVVRIRLNVALDWSGDPAMYFRVILSDEASREDRLAEITGRVSGRLFDDLGLAKMDHIPYFRFRSQSEQTKLQEKAWD
Ga0187784_107736682	3300018062	Tropical Peatland	VDTRIISTLPTQERVDEIARDLAPDVVRIRLTEAPDWSEHPALYFRVVLADEAGRSDRLADVTGRVSTKLFDELGLASLVDIPYFSFRTQSEQAQLRDPEWE
Ga0181510_12324011	3300019240	Peatland	MQQRVDKIATELAPDVVRIRFNMAQDWSEHPAIYFRVVLADDANRRDRLADVTGRVSSKLFDELGLESIDYIPYFRFRSQSEQVRLLNHFGARTPLDNERCSEGL
Ga0179592_103971901	3300020199	Vadose Zone Soil	VYPELRCLVITTLPTQEQVDRIASDLAPDVVHIRMRVGHDWSEHPAIYFRVILSDEASRRERLLEITQRVRGRVRNELGLDDLEHFPYFRFRSQSEQAQLRDPAWE
Ga0210398_102618352	3300021477	Soil	MIAALPTQEQADQIARDLAPDVVHIRLSVKPDWNENPAIYFRVTLSDEASRREPLRDVTGLVRAKVAEGLRLEELDHQPYFRFRSYSEQAELQDPAWA
Ga0212090_101104622	3300022561	Glacier Valley	MDEVVWLASAHMIATLPSQQRIDEIATELAPDVVRIRSNVAPDWSEHPAIYIRVLLADDASRGDRLADVTGRIGTKLFEELGLASLDHIPYFRFRSQSEQARLKDAA
Ga0207663_106228891	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VITTLPTQEQVDQIARELAPDVVHIRMRVGHDWSEHPAIYFRVILSDEASQRDRLLEIIQRVRGKVRDELGFDALEHHPYFRFRSQSEQAQLRDPA
Ga0209838_10463381	3300026214	Soil	MIATLPTQGQVDQIARDLAPDVVRIRWQAGQDWSEHPAIYFRIVLSDEASRAERLAEVTGTVSARLFDSLGLSDSDRIPYFRFRSQGEQAKVGEAAWE
Ga0209863_100022323	3300026281	Prmafrost Soil	MIAALPTQEQVDQIARTLAPDVVRIRLNVWHDWSGDPAIYFRSVLSDEAARERLAEVAERVRQELRARLGLDDLEHISYFRFRTQSEQAVLKEKSWD
Ga0209131_10314733	3300026320	Grasslands Soil	VITTLPTQEQVDRIASDLAPDVVHIRMRVGHDWSEHPAIYFRVILSDEASRRERLLEITQRVRGRVRNELGLDDLEHFPYFRFRSQSEQAQLRDPAWE
Ga0179593_10591213	3300026555	Vadose Zone Soil	MYPEGRCLVIATLPTQEQVDLIARDLSPDVVRVRFNVGQDWSEHPALYFRVILSDEASRLDRLAGVTGLVSGKLFDGLQLAELEHIPYFRFRSDSEQAKLHETAWD
Ga0209908_102470401	3300027745	Thawing Permafrost	MIVTLPTQEQVDRIARDLAPDVVRIRLNVRHDWSGEPALYFRVILSDEASRRERLSEVTGRVRALLSDKLRLDGLEHIPYFRFRSQSEQANLQEKAWD
Ga0209415_102894331	3300027905	Peatlands Soil	MIATLPTQERVDEIARALAPDVVRIRLSVAQDWSEHPAIYFRVILSDEASRGDRLADTAGKVRRKLFEELGLAAMDQIPYFRFRSQSEQAKLRDKAWD
Ga0222749_105725842	3300029636	Soil	ARSHAPDVAHIRLNVSHDWSGDPAIYFKVVLSDEAASSRERLAAVTERVDQELFEGLGLAELDHISYIRYRTLSEQAVLKEKSWD
Ga0247050_10503023	3300029912	Cryconite	MDEVVWLASAHMIATLPSQQRIDEIATELAPDVVRIRSNVAPDWSEHPAIYIRVLLADDASLGDRLADVTGRIGTKLFEELGLASLDHIPYFRFRSQSEQARLKDAA
Ga0310037_101243052	3300030494	Peatlands Soil	MIATLPTQERVDEIARALAPDVVRIRLSVAQDWSEHPAIYFRVILSDEASRGDRLADTAGKVRRKLFEELGLAAIDHFPYFRFRSQSEQAKLRDKAWD
Ga0265760_101079792	3300031090	Soil	MTATLPTQEQVDRIARDLAPDVVRIRLTAKPDWTGDPSLYFRVILSDEASRREPLREVTGLVRRRVAEDLRLEDLDMHPYFRFRTQSEQAELQDPQWA
Ga0302325_100334129	3300031234	Palsa	MTATIPTQEQVDRIARELAPDVVRIRLAVKPDWTDDLSLYFRVTLSDEASRREPLRQVTGLVRAKVAEELRLEDLDMHPYFRFRTQSEQAKLQDPQWA
Ga0302325_102654862	3300031234	Palsa	MIATLPTQEQVDRIARDLAPDVVHIRLDVKPDWNENPAIYFRVTMSDEASRKDRLWDATELVRAKLFDELRLEELDHQPYFNFRSNSEQAELQDPAWA
Ga0302325_111879912	3300031234	Palsa	MIATLPTQEQVDRVARDLAPDVVRIRLDVTTDWTDDPALYFRVTLSDEASRRRPLRDVTGLVRAKVAEELRLEELDRHPYFRFRSYSEQAELLDLAWA
Ga0302325_113480752	3300031234	Palsa	MTETLPTQEQVDRVARDLAPDVVRIRVMEREDWAGDMALYFRVTLSDDASHTDRLGEVAQLVRAKLTEELRLDDMDHHPYVRFRSESEQAKLQDPLWA
Ga0302326_104270854	3300031525	Palsa	MIATLPTQEQVDRVARDLAPDVVRIRLDVTTDWTDDPALYFRVTLSDEASRRRPLRDVTGLVRAKVAEELRLEELDRHPYFRFRSYSEQAELQDPAWA
Ga0302326_127444851	3300031525	Palsa	PGPARQGMLKLDLPMIATLPTQEQVDRIARDLAPDVVRIRLNVRPDWSGEPALYFRVILSDEASRRERLADVTDRVSATLFDKLRLATLEHIPYFRFRSQSEQAALRETAWD
Ga0310686_1097072492	3300031708	Soil	MIATLPTQEQVDRIARDLAPDVVRIRLDVTPDWTGDPALYFRVTLSDEASRRRPLRDVTGLVRAKVAEELRLEELDHHPYFRFRSYSEQAKLQDPAWA
Ga0310686_1171858536	3300031708	Soil	MTATLPTQEQVDRIARDLAPDVVRIRIDVKPDWNENSAIYFRVTMSDEASRKDRLWDATELVRAKLFDELRLEELDHQPYFNFRSNSEQAELQDPAWA
Ga0311301_124756021	3300032160	Peatlands Soil	MIATLPTKDQVDRIARDLAPDVVRIRFNVGQDWSEDPAIYFRVVLSDDASRLDRLAHVTGVVRGRLFDELELSKSDHMPYIRFRSQGEQAKLREAAWE
Ga0348332_105007381	3300032515	Plant Litter	LDAGVCMIETLPTQEQVDQVARELAPDVVRIRLLVSEDWSGDPALYFRVILSDEASRREPLLAVTRLVRAKVAEELRLEESDRHPYFRFRSESEQAKLREPLWE
Ga0348332_118323112	3300032515	Plant Litter	MMTATLPTQEQVDRIARDLAPDVVRIRLTAKPDWTGDPSLYFRVILSDEASRREPLREVTGLVRRRVAEDLRLEDLDMHPYFRFRTQSEQAELQDPQWA
Ga0326727_111616821	3300033405	Peat Soil	MIATLPNQEFIDAIARGLAPDVVRIRSSVTQDWSGHPAIYFRVILSDEASREDRLSDVTTKVRARLSDRLGLAGLDHIPYFRFRSQSEQAKLQDRAWD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100817

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences