NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F100823

Metagenome Family F100823

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F100823
Family Type Metagenome
Number of Sequences 102
Average Sequence Length 49 residues
Representative Sequence FAAWYALGLIGFWVFGYEPKGRTFDEIDETLATPAAPATVRAPAV
Number of Associated Samples 63
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 98.04 %
% of genes from short scaffolds (< 2000 bps) 98.04 %
Associated GOLD sequencing projects 56
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (61.765 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(45.098 % of family members)
Environment Ontology (ENVO) Unclassified
(75.490 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(51.961 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 46.67%    β-sheet: 0.00%    Coil/Unstructured: 53.33%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF07690MFS_1 2.94
PF13458Peripla_BP_6 1.96
PF00083Sugar_tr 1.96
PF08388GIIM 1.96
PF02133Transp_cyt_pur 1.96
PF01925TauE 0.98
PF01070FMN_dh 0.98
PF13231PMT_2 0.98
PF00496SBP_bac_5 0.98
PF04986Y2_Tnp 0.98
PF13474SnoaL_3 0.98
PF00536SAM_1 0.98
PF00903Glyoxalase 0.98
PF13525YfiO 0.98
PF00561Abhydrolase_1 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG0069Glutamate synthase domain 2Amino acid transport and metabolism [E] 0.98
COG0730Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 familyInorganic ion transport and metabolism [P] 0.98
COG1304FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomeraseEnergy production and conversion [C] 0.98


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms61.76 %
UnclassifiedrootN/A38.24 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005332|Ga0066388_104227390All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria732Open in IMG/M
3300005764|Ga0066903_106312392Not Available619Open in IMG/M
3300006794|Ga0066658_10698466All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300007255|Ga0099791_10542649All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300009792|Ga0126374_10297908All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1080Open in IMG/M
3300009792|Ga0126374_10546911All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300010048|Ga0126373_11964251Not Available648Open in IMG/M
3300010359|Ga0126376_12605673All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300010359|Ga0126376_12998629All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria522Open in IMG/M
3300010361|Ga0126378_10462372All Organisms → cellular organisms → Bacteria1383Open in IMG/M
3300010361|Ga0126378_11354082All Organisms → cellular organisms → Bacteria805Open in IMG/M
3300010361|Ga0126378_11639654All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300010376|Ga0126381_102635452All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300010376|Ga0126381_102735387All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium705Open in IMG/M
3300012209|Ga0137379_10699870All Organisms → cellular organisms → Bacteria919Open in IMG/M
3300012210|Ga0137378_10425944All Organisms → cellular organisms → Bacteria1230Open in IMG/M
3300012917|Ga0137395_10412418All Organisms → cellular organisms → Bacteria968Open in IMG/M
3300012971|Ga0126369_11077552All Organisms → cellular organisms → Bacteria892Open in IMG/M
3300012971|Ga0126369_11236449Not Available837Open in IMG/M
3300012971|Ga0126369_11311766All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300012971|Ga0126369_11826075All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300016319|Ga0182033_10900133Not Available783Open in IMG/M
3300016319|Ga0182033_11911080Not Available540Open in IMG/M
3300016341|Ga0182035_10483360All Organisms → cellular organisms → Bacteria1055Open in IMG/M
3300016357|Ga0182032_11770331Not Available539Open in IMG/M
3300016371|Ga0182034_10022885All Organisms → cellular organisms → Bacteria → Proteobacteria3770Open in IMG/M
3300016387|Ga0182040_10775750Not Available788Open in IMG/M
3300016387|Ga0182040_10993520All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300016404|Ga0182037_11255857All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300016422|Ga0182039_11974498Not Available536Open in IMG/M
3300016422|Ga0182039_12267319All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300016445|Ga0182038_10727291Not Available866Open in IMG/M
3300016445|Ga0182038_10808656Not Available822Open in IMG/M
3300020583|Ga0210401_11550951Not Available520Open in IMG/M
3300021404|Ga0210389_11079003Not Available621Open in IMG/M
3300021476|Ga0187846_10211248Not Available812Open in IMG/M
3300021560|Ga0126371_11251848All Organisms → cellular organisms → Bacteria877Open in IMG/M
3300031543|Ga0318516_10776165Not Available542Open in IMG/M
3300031549|Ga0318571_10304203Not Available600Open in IMG/M
3300031564|Ga0318573_10180632Not Available1115Open in IMG/M
3300031668|Ga0318542_10264244All Organisms → cellular organisms → Bacteria877Open in IMG/M
3300031668|Ga0318542_10507989All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300031668|Ga0318542_10741495All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300031680|Ga0318574_10407863Not Available794Open in IMG/M
3300031719|Ga0306917_10534047Not Available922Open in IMG/M
3300031719|Ga0306917_10752580All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300031723|Ga0318493_10593463Not Available617Open in IMG/M
3300031736|Ga0318501_10254123All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium930Open in IMG/M
3300031747|Ga0318502_10992691All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300031748|Ga0318492_10561784All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300031748|Ga0318492_10664793Not Available557Open in IMG/M
3300031771|Ga0318546_10319297Not Available1077Open in IMG/M
3300031771|Ga0318546_10822035Not Available654Open in IMG/M
3300031781|Ga0318547_10563250Not Available706Open in IMG/M
3300031795|Ga0318557_10351713All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300031833|Ga0310917_10426278All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Azotobacter group → Azotobacter → Azotobacter beijerinckii902Open in IMG/M
3300031833|Ga0310917_11048498Not Available545Open in IMG/M
3300031859|Ga0318527_10088161All Organisms → cellular organisms → Bacteria1262Open in IMG/M
3300031879|Ga0306919_11313743All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300031880|Ga0318544_10426575Not Available516Open in IMG/M
3300031890|Ga0306925_11195071Not Available762Open in IMG/M
3300031890|Ga0306925_11672624All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300031890|Ga0306925_11853395Not Available575Open in IMG/M
3300031890|Ga0306925_12277665Not Available501Open in IMG/M
3300031893|Ga0318536_10319385Not Available787Open in IMG/M
3300031893|Ga0318536_10473778All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300031893|Ga0318536_10596248Not Available553Open in IMG/M
3300031894|Ga0318522_10345192Not Available564Open in IMG/M
3300031910|Ga0306923_10898309Not Available970Open in IMG/M
3300031910|Ga0306923_11878115All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300031912|Ga0306921_10256833Not Available2047Open in IMG/M
3300031941|Ga0310912_10804680All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300031941|Ga0310912_10919015All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria673Open in IMG/M
3300031941|Ga0310912_11395052All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300031942|Ga0310916_10384850All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1193Open in IMG/M
3300031942|Ga0310916_11108876All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300031945|Ga0310913_10397803All Organisms → cellular organisms → Bacteria977Open in IMG/M
3300031947|Ga0310909_10892278Not Available730Open in IMG/M
3300031947|Ga0310909_11245140All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae600Open in IMG/M
3300031954|Ga0306926_10309052All Organisms → cellular organisms → Bacteria1956Open in IMG/M
3300031954|Ga0306926_10579911All Organisms → cellular organisms → Bacteria1371Open in IMG/M
3300031954|Ga0306926_11242177Not Available873Open in IMG/M
3300031954|Ga0306926_11260009All Organisms → cellular organisms → Bacteria865Open in IMG/M
3300031959|Ga0318530_10126189All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1030Open in IMG/M
3300031981|Ga0318531_10301065All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae724Open in IMG/M
3300032001|Ga0306922_10906820All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300032001|Ga0306922_11600912All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300032035|Ga0310911_10764168All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300032052|Ga0318506_10280917All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300032059|Ga0318533_10695580All Organisms → cellular organisms → Bacteria746Open in IMG/M
3300032076|Ga0306924_11114727All Organisms → cellular organisms → Bacteria859Open in IMG/M
3300032076|Ga0306924_11390212Not Available749Open in IMG/M
3300032091|Ga0318577_10392399Not Available663Open in IMG/M
3300032091|Ga0318577_10423947All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300032261|Ga0306920_100480207Not Available1845Open in IMG/M
3300032261|Ga0306920_102275337All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales752Open in IMG/M
3300032261|Ga0306920_104378469All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300033289|Ga0310914_10292544All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1468Open in IMG/M
3300033289|Ga0310914_10524810Not Available1070Open in IMG/M
3300033289|Ga0310914_10927463All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300033290|Ga0318519_10442417All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae778Open in IMG/M
3300033290|Ga0318519_10451629All Organisms → cellular organisms → Bacteria770Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil45.10%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil32.35%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil14.71%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.92%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.98%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.98%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031795Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031859Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031880Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031894Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031959Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24EnvironmentalOpen in IMG/M
3300031981Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032091Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0066388_10422739023300005332Tropical Forest SoilAPNLVMLGPAFAYFASFYLLGLLGFWVFGYEPKGRSFEEIDSALAKPAPAA*
Ga0066903_10631239213300005764Tropical Forest SoilWYAFGLIGFWVFGYEPKGRTFDEIDEALATPATPGTVRAPVA*
Ga0066658_1069846623300006794SoilGLIGFWVFGFEPRGRTFDAIDAVHEATARPATVSRARAPA*
Ga0099791_1054264923300007255Vadose Zone SoilIGFWVFGYEPKGRTFDEIDAALDAPATAAGSGARAPAG*
Ga0126374_1029790823300009792Tropical Forest SoilVYFASWYVLGLLGFWVFGYEPKGRTFEEIDSTLARPAAALERAPAA*
Ga0126374_1054691123300009792Tropical Forest SoilLGLIGFWVFGYEPKGRTFDEIDETLAAPPGPATVRAPAV*
Ga0126373_1196425113300010048Tropical Forest SoilWYALGLIGFWVFGYEPKGRTFDEIDETLAAPAGPATVRAPAV*
Ga0126376_1260567313300010359Tropical Forest SoilSWYVLGLIGFWVFGYEPKGRSFDEIDSELDAPAVAAGPVRAPAV*
Ga0126376_1299862913300010359Tropical Forest SoilSWYVLGLLGFWVFGYEPKGRTFEEIDSTLARPAAALERAPAA*
Ga0126378_1046237233300010361Tropical Forest SoilDVIKPAAPNLAMLGPTFVYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLAAPAGPATVRAPAV*
Ga0126378_1135408223300010361Tropical Forest SoilMLGPAFVYFASWYVLGLIGFWVFGYEPKGRTFDEIDEALATPATPGTVRAPVA*
Ga0126378_1163965423300010361Tropical Forest SoilYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLAAPAASATLRAPAV*
Ga0126381_10263545213300010376Tropical Forest SoilDVIKPAAPNLAMLGPAFIYFAAWYALGLIGFWAFGYEPKGRTFDEIDEALATPAGPAIVRAPAV*
Ga0126381_10273538713300010376Tropical Forest SoilPAAPNLAMLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDEALATPAA*
Ga0137379_1069987013300012209Vadose Zone SoilPNLKMLGPAFAYFASWYVVGLIGFWVFGYEPKGRTFDEIDAALDAPATAAASGARAPAG*
Ga0137378_1042594423300012210Vadose Zone SoilGLIGFWVFGYEPRGRTFDEIDAALDAPATAAASGARAPAG*
Ga0137395_1041241823300012917Vadose Zone SoilYFASWYVVGLIGFWVFGYEPKGRTFDEIDAALDAPATAAASGARAPAG*
Ga0126369_1107755213300012971Tropical Forest SoilNLAMLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDERLATPAGPATVRAPAV*
Ga0126369_1123644913300012971Tropical Forest SoilAMLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLAAPPGPVTVRAPAV*
Ga0126369_1131176623300012971Tropical Forest SoilAPNLVMLGPTMIYFASWYVLGLIGFWVFGYEPKGRSFDEIDSELDAPAASAAPVRAPAV*
Ga0126369_1182607513300012971Tropical Forest SoilVIKPAAPNLAMLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLATPAGPAVVRARAV*
Ga0182033_1090013313300016319SoilAWYVLGLIGFWVFGYEPKGRTFDEIDETLAMSAAPATVRAPAV
Ga0182033_1191108023300016319SoilGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLAIPAAPATVRAPAVYEC
Ga0182035_1048336013300016341SoilFAAWYALGLIGFWVFGYEPKGRTFDEIDETLAASAASATVRAPAV
Ga0182032_1177033113300016357SoilLAMLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLATPAVPATVRASAV
Ga0182034_1002288553300016371SoilIGFWVFGYEPKGRTFEEIDETLATPAGPATVRAPAV
Ga0182040_1077575013300016387SoilLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLAMPAAPATARAPAV
Ga0182040_1099352023300016387SoilFAAWYALGLIGFWVFGYEPKGRTFDEIDETFATPAGPASVRARAV
Ga0182037_1125585713300016404SoilGDVIKPAAPNLAMLGPAFVYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLAAPPGPATVRAPAV
Ga0182039_1197449813300016422SoilGFWVFGYEPKGRTFDEIDETLAMSAAPATVRAPAV
Ga0182039_1226731913300016422SoilFAAWYALGLIGFWVFGYEPKGRTFDEIDERLATPAGPATVRAPAV
Ga0182038_1072729123300016445SoilYFAAWYALGLIGFWAFGYEPKGRTFDEIDETLAASAASATVRAPAV
Ga0182038_1080865613300016445SoilGLIGFWVFGYEPKGRTFDEIDETLATPARPATVRASAV
Ga0210401_1155095123300020583SoilWYVLGLIGFWVFGYEPRGRTFDEIDSALDAPARSAARSARAPAV
Ga0210389_1107900323300021404SoilPAFVYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLATPAAPGTARAPAS
Ga0187846_1021124823300021476BiofilmRMGLWVFGYEPKGRTFDEIDETLAAPAASATVRAPAM
Ga0126371_1125184813300021560Tropical Forest SoilAMLGPAFVYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLAAPAGPATVRAPAV
Ga0318516_1077616513300031543SoilPAFVYFAAWYALGLIGFWVFGYEPKGRTFDEIDETFATPAGPASVRARAV
Ga0318571_1030420313300031549SoilFVYFAAWYALGLIGFWAFGYEPKGRTFDEIDETLAASAASATVRAPAV
Ga0318573_1018063223300031564SoilFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLATPAPPATVRVPAV
Ga0318542_1026424433300031668SoilRGAGDVIQPAAPNLAMLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETFATPAGPASVRARAV
Ga0318542_1050798913300031668SoilLGPAFVYFAAWYALGLIGFWVFGYEPKGRTFEEIDETLATPAGPATVRAPAV
Ga0318542_1074149513300031668SoilKPAAPNLAMLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDATLATPAASGTVRASA
Ga0318574_1040786313300031680SoilMLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLAMPAAPATVRAPAV
Ga0306917_1053404713300031719SoilPAAPNLAMLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDEILAMPAAPATVRAPAV
Ga0306917_1075258013300031719SoilIKPAAPNLAMLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLATPAVPATVRASAV
Ga0318493_1059346313300031723SoilLGLIGFWVFGYEPKGRTFDEIDETLATPARPATVRASAV
Ga0318501_1025412313300031736SoilLAMLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLAIPAAPVTVRAPAV
Ga0318502_1099269113300031747SoilYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLAMPAAPATVRAPAV
Ga0318492_1056178423300031748SoilAMLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLATPAPPATVRVPAV
Ga0318492_1066479313300031748SoilLAMLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLAMSAAPATVRAPAV
Ga0318546_1031929723300031771SoilLAMLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLATPAPPATVRVPAV
Ga0318546_1082203513300031771SoilMLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLATPAAPATVRAPAV
Ga0318547_1056325013300031781SoilFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLAMSAAPATVRAPAV
Ga0318557_1035171323300031795SoilPAALNLAMLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLATPAAPATVRAPAV
Ga0310917_1042627813300031833SoilLAMLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLAMPAAPATARAPAV
Ga0310917_1104849823300031833SoilLAMLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDATLATPAASGTVRASAV
Ga0318527_1008816113300031859SoilAAPNLAMLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLATPAGPATVRAPAV
Ga0306919_1131374313300031879SoilKPAAPNLAMLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLATPAAPATVRAPA
Ga0318544_1042657513300031880SoilGFWVFGYEPKGRTFDEIDETLATPAAPATVRAPAV
Ga0306925_1119507113300031890SoilGLIGFWVFGYEPKGRTFDEIDETLAMSAAPATVRAPAV
Ga0306925_1167262413300031890SoilPNLAMLGPAFVYFASWYALGLIGFWVFGYEPKGRTFDEIDETLATPAGPATVRAPAV
Ga0306925_1185339523300031890SoilFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLAIPAAPATVRAPAVYEC
Ga0306925_1227766513300031890SoilIGFWVFGYEPKGRTFDEIDETLAAPPGPATVRAPAV
Ga0318536_1031938513300031893SoilLIGFWVFGYEPKGRTFDEIDETLAMSAAPATVRAPAV
Ga0318536_1047377813300031893SoilAMLGPAFVYFAAWYALGLIGFWVFGYEPKGRTFDEIDETFATPAGPASVRARAV
Ga0318536_1059624823300031893SoilLIGFWVFGYEPKGRTFDEIDETLAAPPGPATVRAPAV
Ga0318522_1034519213300031894SoilPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLAMSAAPTTVRAPAV
Ga0306923_1089830913300031910SoilALGLIGFWVFGYEPKGRTFDEIDETLAMSAAPATVRAPAV
Ga0306923_1187811523300031910SoilIGFWVFGYEPKGRTFDEIDETLATPAAPATVRAPAV
Ga0306921_1025683313300031912SoilLIGFWVFGYEPKGRTFDEIDETLAMPAAPATVRAPAV
Ga0310912_1080468013300031941SoilLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLATPAAPATVRAPAV
Ga0310912_1091901523300031941SoilMALGRTWYALGLIGFWVFGYEPKGRTFDEIDETLAMPVGPATVRAPAV
Ga0310912_1139505213300031941SoilVYFASWYALGLIGFWVFGYEPKGRTFDEIDETLATPAGPATVRAPAV
Ga0310916_1038485023300031942SoilAAPNLAMLGPAFIDVAAWYALGLIGFWVFGYEPKGRTFDEIDETLAMSAAPATVRAPAV
Ga0310916_1110887613300031942SoilYALGLIGFWVFGYEPKGRTFDEIDERLATPAGPATVRAPAV
Ga0310913_1039780313300031945SoilLGPAFVYFAAWYALGLIGFWVFGYEPKGRTFDEIDETFATPAGPASVRARAV
Ga0310909_1089227813300031947SoilIGFWVFGYEPKGRTFDEIDETLAMSAAPTTVRAPAV
Ga0310909_1124514013300031947SoilFAAWYALGLIGFWVFGYEPKGRTFDEIDETLATPAPPATVRVPAV
Ga0306926_1030905223300031954SoilNLAMLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLAMPAAPATARAPAV
Ga0306926_1057991123300031954SoilYALGLIGFWVFGYEPKGRTFDEIDETLAMSAAPATVRAPAV
Ga0306926_1124217713300031954SoilPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLAIPAAPATVRAPAVYEC
Ga0306926_1126000923300031954SoilFAAWYALGLIGFWVFGYEPKGRTFDEIDETLATPAAPATVRAPAV
Ga0318530_1012618913300031959SoilWYALGLIGFWVFGYEPKGRTFDEIDETLAMSAAPATVRAPAV
Ga0318531_1030106513300031981SoilLLGFWVFGYEPKGRTFDEIDETLATPAAPATARAPAV
Ga0306922_1090682023300032001SoilAWYALGLIGFWVFGYEPKGRTFEEIDETLATPAAPATVRAPAV
Ga0306922_1160091213300032001SoilAAWYALGLIGFWVFGYEPKGRTFDEIDETLATPAVPATVRASAV
Ga0310911_1076416813300032035SoilGAGDVIKPAAPNLAMLGPAFVYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLAMSAAPATVRAPAV
Ga0318506_1028091713300032052SoilVIKPAAPNLAMLGPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLATPAPPATVRVPAV
Ga0318533_1069558023300032059SoilLGLIGFWVFGYEPKGRTFEEIDETLATPAAPATVRAPAV
Ga0306924_1111472713300032076SoilLGLIGFWVFGYEPKGRTFEEIDETLATPAGPATVRAPAV
Ga0306924_1139021213300032076SoilLGLIGFWVFGYEPKGRTFDEIDETLAMSAAPATVRAPAV
Ga0318577_1039239913300032091SoilYALGLIGFWVFGYEPKGRTFDEIDETLAMPAAPATVRAPAV
Ga0318577_1042394723300032091SoilPNLAMLGPAFVYFAAWYALGLIGFWVFGYEPKGRTFDEIDETFATPAGPASVRARAV
Ga0306920_10048020723300032261SoilPAFIYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLAMSAAPATVRAPAV
Ga0306920_10227533713300032261SoilALGLIGFWVFGYEPKGRTFDEIDETFATPAGPTTVRARAV
Ga0306920_10437846913300032261SoilAMLGPAFVYFASWYALGLIGFWVFGYEPKGRTFDEIDETLATPAGPATVRAPAV
Ga0310914_1029254443300033289SoilGDVIKPAAPNLAMLGPAFVYFAAWYALGLIGFWVFGYEPKGRTFDEIDETFATPAGPASVRARAV
Ga0310914_1052481013300033289SoilGPAFVYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLAAPPGPATVRAPAV
Ga0310914_1092746313300033289SoilVIKPAAPNLAMLGPAFLYFAAWYALGLIGFWVFGYEPKGRTFDEIDETLAASAASATVRAPAV
Ga0318519_1044241713300033290SoilFIYFAAWYALGLLGFWVFGYEPKGRTFDEIDETLATPAAPATARAPAV
Ga0318519_1045162913300033290SoilMLGPAFIYFAAWYVLGLIGFWVFGYEPKGRTFDEIDETLATPARPATVRASAV


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