Metagenome Family F100868

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100868
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	139 residues
Representative Sequence	MDYELGAPRHGEAIHPGRAIDAAVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKFLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN
Number of Associated Samples	95
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	30.61 %
% of genes near scaffold ends (potentially truncated)	62.75 %
% of genes from short scaffolds (< 2000 bps)	76.47 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.078 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (28.431 % of family members)
Environment Ontology (ENVO)	Unclassified (53.922 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.725 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.99% β-sheet: 15.95% Coil/Unstructured: 57.06%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00106	adh_short	26.47
PF07366	SnoaL	14.71
PF12833	HTH_18	8.82
PF13561	adh_short_C2	7.84
PF01047	MarR	3.92
PF08447	PAS_3	2.94
PF01243	Putative_PNPOx	2.94
PF13278	Obsolete Pfam Family	1.96
PF04879	Molybdop_Fe4S4	1.96
PF13602	ADH_zinc_N_2	0.98
PF01638	HxlR	0.98
PF01594	AI-2E_transport	0.98
PF16884	ADH_N_2	0.98
PF00141	peroxidase	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0376	Catalase (peroxidase I)	Inorganic ion transport and metabolism [P]	0.98
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.98
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.08 %
Unclassified	root	N/A	3.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.08 %
Unclassified	root	N/A	3.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.08 %
Unclassified	root	N/A	3.92 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	43.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.43 %
Unclassified	root	N/A	3.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.96 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	43.14 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.92 %
Unclassified	root	N/A	3.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.98 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.98 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	43.14 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.86 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	3.92 %
Unclassified	root	N/A	3.92 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	43.14 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	3.92 %
Unclassified	root	N/A	3.92 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.98 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	43.14 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	3.92 %
Unclassified	root	N/A	3.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.98 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	43.14 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	3.92 %
Unclassified	root	N/A	3.92 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.98 %
Desulfosporosinus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfosporosinus	0.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	43.14 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	3.92 %
Unclassified	root	N/A	3.92 %
Desulfosporosinus orientis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfosporosinus → Desulfosporosinus orientis	0.98 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_103819607	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	600	Open in IMG/M
3300002558\|JGI25385J37094_10001964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6738	Open in IMG/M
3300002561\|JGI25384J37096_10118317	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	893	Open in IMG/M
3300002908\|JGI25382J43887_10051427	All Organisms → cellular organisms → Bacteria	2239	Open in IMG/M
3300002908\|JGI25382J43887_10350062	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300002909\|JGI25388J43891_1007015	All Organisms → cellular organisms → Bacteria → Proteobacteria	2207	Open in IMG/M
3300002911\|JGI25390J43892_10023361	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300002912\|JGI25386J43895_10092840	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	789	Open in IMG/M
3300005166\|Ga0066674_10021975	All Organisms → cellular organisms → Bacteria	2762	Open in IMG/M
3300005181\|Ga0066678_10438237	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	868	Open in IMG/M
3300005186\|Ga0066676_10422774	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300005343\|Ga0070687_100116382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1522	Open in IMG/M
3300005353\|Ga0070669_101507257	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	585	Open in IMG/M
3300005445\|Ga0070708_100626001	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1014	Open in IMG/M
3300005447\|Ga0066689_10077580	All Organisms → cellular organisms → Bacteria	1856	Open in IMG/M
3300005536\|Ga0070697_100278892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1434	Open in IMG/M
3300005545\|Ga0070695_101391524	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	581	Open in IMG/M
3300005552\|Ga0066701_10046319	All Organisms → cellular organisms → Bacteria	2364	Open in IMG/M
3300005553\|Ga0066695_10322013	All Organisms → cellular organisms → Bacteria → Proteobacteria	972	Open in IMG/M
3300005556\|Ga0066707_10149028	All Organisms → cellular organisms → Bacteria	1481	Open in IMG/M
3300005559\|Ga0066700_10262710	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300005586\|Ga0066691_10539845	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	695	Open in IMG/M
3300005598\|Ga0066706_10705399	All Organisms → cellular organisms → Bacteria → Proteobacteria	801	Open in IMG/M
3300005615\|Ga0070702_101843639	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	506	Open in IMG/M
3300006034\|Ga0066656_10397046	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300006791\|Ga0066653_10125446	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1211	Open in IMG/M
3300006800\|Ga0066660_10271105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1339	Open in IMG/M
3300006800\|Ga0066660_11251242	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300006806\|Ga0079220_11353504	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300006844\|Ga0075428_100105528	All Organisms → cellular organisms → Bacteria	3072	Open in IMG/M
3300006844\|Ga0075428_102528323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfosporosinus → Desulfosporosinus orientis	525	Open in IMG/M
3300006871\|Ga0075434_102667811	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	500	Open in IMG/M
3300006880\|Ga0075429_101159926	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300006903\|Ga0075426_11223562	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300006914\|Ga0075436_100714863	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300007255\|Ga0099791_10090869	All Organisms → cellular organisms → Bacteria	1398	Open in IMG/M
3300007255\|Ga0099791_10177742	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1000	Open in IMG/M
3300009137\|Ga0066709_104386109	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	515	Open in IMG/M
3300009177\|Ga0105248_11107269	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	895	Open in IMG/M
3300010303\|Ga0134082_10033807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1928	Open in IMG/M
3300010304\|Ga0134088_10369998	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	697	Open in IMG/M
3300010320\|Ga0134109_10280613	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	636	Open in IMG/M
3300010323\|Ga0134086_10007737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3241	Open in IMG/M
3300010329\|Ga0134111_10091124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1160	Open in IMG/M
3300010333\|Ga0134080_10029039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2098	Open in IMG/M
3300010335\|Ga0134063_10294735	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	779	Open in IMG/M
3300010359\|Ga0126376_12227306	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	593	Open in IMG/M
3300010373\|Ga0134128_12322343	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	591	Open in IMG/M
3300010373\|Ga0134128_12615165	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	556	Open in IMG/M
3300010399\|Ga0134127_10898080	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	941	Open in IMG/M
3300010401\|Ga0134121_12097609	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	600	Open in IMG/M
3300012199\|Ga0137383_10795159	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	691	Open in IMG/M
3300012205\|Ga0137362_11285501	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	617	Open in IMG/M
3300012207\|Ga0137381_10647292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	920	Open in IMG/M
3300012211\|Ga0137377_10024152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5426	Open in IMG/M
3300012355\|Ga0137369_11119362	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	513	Open in IMG/M
3300012685\|Ga0137397_10553539	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	856	Open in IMG/M
3300012922\|Ga0137394_10126935	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2162	Open in IMG/M
3300012972\|Ga0134077_10031628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1882	Open in IMG/M
3300014968\|Ga0157379_12194449	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	548	Open in IMG/M
3300015359\|Ga0134085_10003768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5451	Open in IMG/M
3300018027\|Ga0184605_10031330	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2194	Open in IMG/M
3300018431\|Ga0066655_11348254	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	515	Open in IMG/M
3300018433\|Ga0066667_10173272	All Organisms → cellular organisms → Bacteria → Proteobacteria	1552	Open in IMG/M
3300018482\|Ga0066669_11095771	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	719	Open in IMG/M
3300019877\|Ga0193722_1028150	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1455	Open in IMG/M
3300019890\|Ga0193728_1147361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1039	Open in IMG/M
3300025899\|Ga0207642_10424893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	800	Open in IMG/M
3300026118\|Ga0207675_100410612	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1336	Open in IMG/M
3300026277\|Ga0209350_1036252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1457	Open in IMG/M
3300026296\|Ga0209235_1052742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1945	Open in IMG/M
3300026297\|Ga0209237_1043259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2335	Open in IMG/M
3300026298\|Ga0209236_1013941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4662	Open in IMG/M
3300026301\|Ga0209238_1147577	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	725	Open in IMG/M
3300026304\|Ga0209240_1211666	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	587	Open in IMG/M
3300026306\|Ga0209468_1047841	All Organisms → cellular organisms → Bacteria → Proteobacteria	1456	Open in IMG/M
3300026307\|Ga0209469_1054725	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1247	Open in IMG/M
3300026310\|Ga0209239_1008676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5521	Open in IMG/M
3300026314\|Ga0209268_1008166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4367	Open in IMG/M
3300026324\|Ga0209470_1296988	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	602	Open in IMG/M
3300026329\|Ga0209375_1054951	All Organisms → cellular organisms → Bacteria	1962	Open in IMG/M
3300026332\|Ga0209803_1034442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2359	Open in IMG/M
3300026333\|Ga0209158_1054304	All Organisms → cellular organisms → Bacteria	1625	Open in IMG/M
3300026343\|Ga0209159_1055162	All Organisms → cellular organisms → Bacteria	1924	Open in IMG/M
3300026358\|Ga0257166_1001682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2113	Open in IMG/M
3300026377\|Ga0257171_1003913	All Organisms → cellular organisms → Bacteria	2275	Open in IMG/M
3300026524\|Ga0209690_1035096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2372	Open in IMG/M
3300026524\|Ga0209690_1064962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1578	Open in IMG/M
3300026537\|Ga0209157_1295598	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	596	Open in IMG/M
3300026542\|Ga0209805_1365073	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	551	Open in IMG/M
3300027056\|Ga0209879_1051075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	671	Open in IMG/M
3300027655\|Ga0209388_1054860	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1150	Open in IMG/M
3300027748\|Ga0209689_1066223	All Organisms → cellular organisms → Bacteria	1959	Open in IMG/M
3300027880\|Ga0209481_10069251	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300031680\|Ga0318574_10933341	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	508	Open in IMG/M
3300031805\|Ga0318497_10464165	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	709	Open in IMG/M
3300031947\|Ga0310909_10589358	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	929	Open in IMG/M
3300032174\|Ga0307470_11632287	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	540	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.27%
Host-Associated	Host-Associated	13.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.29%
Plants	Host-Associated → Plants	13.73%
Aquatic	Environmental → Aquatic	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.94%
Sediment	Environmental → Aquatic → Sediment	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.80%
Loam	Environmental → Terrestrial → Soil → Loam	4.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.98%
Sand	Environmental → Terrestrial → Soil → Sand	0.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	46.08%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	28.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	17.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.98%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1038196071	3300000955	Soil	PVFDALLVWGMDHALGPTRRGEAIHPGRAIDATVRYLAQRRMRGARRMAWVFRFGDDRSYTIRFDGTRWIRQRGEAAADVVVQTTPEGLVQFLSTDVEGRRRWLRKRRATGTRQQLDKLATAFGPAHDAGLETATIRSGGIRR*
JGI25385J37094_100019646	3300002558	Grasslands Soil	MDYELGAPRHGEAIHPGRAIDAAVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKFLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN*
JGI25384J37096_101183172	3300002561	Grasslands Soil	RRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKFLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN*
JGI25382J43887_100514272	3300002908	Grasslands Soil	KGQALEPVFDALLVWGMDHALGPPRGGEAIHPGRAMDAIVRYLAHRRPRGTRRTTWVFRFGDDRSYTIRFDGARWTRQRGEVAADVIVETSPDEWVKFLSADVEGRRRWLRKRRAKGARQRLDELATAFGAAHGASGPLP*
JGI25382J43887_103500621	3300002908	Grasslands Soil	RDVTGEREVRYRLTPKGEALEPVFDALLVWGMDYALGSPRHGEAIHPGRAIDATVRYLNRRRVRAARRVVWVILFGEDRSYTIRFDGARWSRQRGAAPADVTVQTSPPEWVKFLSADPKGRRRWLRQQRAAGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMAKN*
JGI25388J43891_10070153	3300002909	Grasslands Soil	VRYLNRRRVRAERHVVWVIHFGADRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKFLSADVEGRRRWVRERRASETRGRLDELLTSCGAPRQTSRSRERGSRRAAMAKN*
JGI25390J43892_100233611	3300002911	Grasslands Soil	LEPVFDALLVWGMDHALGPPRGGEAIHPGRAMDAIARYLAHRRPQGTRRTTWVFRFGDGRSYTIRFDGARWTRERGEATADVIVQTSPNEWVNFLSADLEGRRRWLRKRRAKGTRQRLDELATAFGPAHGASGHSRENRRSGS*
JGI25386J43895_100928402	3300002912	Grasslands Soil	MDXELGAPRHGEAIHPGRAIDAAVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKFLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN*
Ga0066674_100219752	3300005166	Soil	LKTGSVRWDSFAQSSELVRSAENGNDGSRSRIDYELGAPRHGEAIHPGRAIDAAVRYLHRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKCLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSCERGSRRAAMAKN*
Ga0066678_104382372	3300005181	Soil	PARAFGSWRSIYRPSEMARSLGPTTLKTGSVRWDSFAQSSELVRSAENGNDGSRSRMDYELGAPRHGEAIHPGRAIDTAVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKFLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN*
Ga0066676_104227742	3300005186	Soil	LTPKGEALEPVFDALLVWGMDYALGSPRHGEAIHPGRAIDATVRYLNRRRVRAARRVVWVILFGEDRSYTIRFDGARWSRQRGAAPADVTVQTSPPEWVKFLSADPKGRRRWLRQQRAAGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMAKN*
Ga0066675_106664872	3300005187	Soil	VFDALLVWGMDHALGPPRGGEAIHPGRAMDAIVRYLAHRRPRGTRRTTWVFRFGDGRSYTIRFDGARWTRQRGEAAADVIVQTSPDEWVNFLSADLEGRRRWLRKRRAKGTRQRLDELATAFGAAHGVSGPLP*
Ga0070687_1001163821	3300005343	Switchgrass Rhizosphere	GSPRHGEAIHPGRAIDATVRYLNRRRVRAARRVVWVILFGEDSSYTIRFDGARWSRQRGAAPADVTVQTSPPEWVKFLSADPKGRRRWLRQQRATGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMAKN*
Ga0070669_1015072571	3300005353	Switchgrass Rhizosphere	VRAARRVVWVILFGEDSSYTIRFDGARWSRQRGAAPADVTVQTSPPEWVKFLSADPKGRRRWLRQQRATGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMVKN*
Ga0070708_1006260011	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LLVWGMDYALGSPRHGEAIHPGRAIDATVRYLNRRRVRAARRVVWVILFGEDSSYTIRFDGARWSRQRGAAPADVTVQTSPPEWVKFLSADPKGRRRWLRQQRATGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMVKN*
Ga0066689_100775803	3300005447	Soil	LKTGSVRWDSFAQSSELVRSAENGNDGSRSRIDYELGAPRHGEAIHPGRAIDAAVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKFLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN*
Ga0070697_1002788924	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	WYHLTPKGQALEPVFDALLVWGMDHALGLPRGGEAIHPGRTMDTMVRYLAHRRPRGTGRTTWVFRFGDDRSYTIRFDGTRWIRQRGEGAADVVVQTTPDEWVKFLSADVEGRRRWLRKRRATGTRQRLDELATAFGPAHDAGLETATIESGGIRR*
Ga0070695_1013915241	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VRYLNRRRVRAARRVVWVILFGEDRSYTIRFDGARWSRQRGAAPADVTVQTSPPEWVKFLSADPKGRRRWLRQQRAAGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMAKN*
Ga0066701_100463194	3300005552	Soil	LKTGSVRWDSFAQSSELVRSAENGNDGSRSRMDYELGAPRHGEAIHPGRAIDAAVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKFLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN*
Ga0066695_103220132	3300005553	Soil	LKTGSVRWDSFAQSSELVRSAENGNDGSRSRIDYELGAPRHGEAIHPGRAIDAAVRYLHRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKCLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRTAMAKN*
Ga0066707_101490282	3300005556	Soil	LKTGSVRWDSFAQSSELVRSAENGNDGSRSRIDYELGAPRHGEAIHPGRAIDAAVRYLHRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVRTSPPEWVKCLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN*
Ga0066700_102627101	3300005559	Soil	LKTGSVRWDSFAQSSELVRSAENGNDGSRSRMDYELGAPRHGEAIHPGRAIDAAVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKFLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQT
Ga0066691_105398451	3300005586	Soil	AFGSWRSIYRPSEMARSLGPTTLKTGSVRWDSFAQSSELERSTENGNGGSRSRMDYEPGAPRHGEAIHPGRAIDTAVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKCLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN*
Ga0066706_107053992	3300005598	Soil	VRWDSFAQSSELVRSAENGNDGSRSRIDYELGAPRHGEAIHPGRAIDAAVRYLHRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKCLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSCERGSRRAAMAKN*
Ga0070702_1018436391	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	EAIHPGRAIDATVRYLNRRRVRAARRVVWVILFGEDRSYTIRFDGARWSRQRGVAPADVTVQTSPPEWVKFLSADPKGRRRWLRQQRATGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMVKN*
Ga0066656_103970462	3300006034	Soil	LTPKGEALEPVFDALLVWGMDYALGSPRHGEAIHPGRAIDATVRYLNRRRVRAARRVVWVILFGEDRSYTIRFDGARWSRQRGAAPADVTVQTSPPEWVKFLSADPKGRRRWLRQQRAAGTRQRLDELMTSFGVPQQTLRSREPGSQRAARAKN*
Ga0066653_101254462	3300006791	Soil	LKTGSVRWDSFAQSSELVRSAENGNDGSRSRIDYELGAPRHGEAIHPGRAIDAAVRYLNRRRVRAERHVAWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKCLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSCERGSRRAAMAKN*
Ga0066660_102711053	3300006800	Soil	AAVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKFLSADVGGRRRWVRERRASETRGRLDELLTSCGAPRQTSRSRERGSRRAAMAKN*
Ga0066660_112512421	3300006800	Soil	EVRYRLTPKGEALEPVFDALLVWGMDYALGSPRHGEAIHPGRAIDATVRYLNRRRVRAARRVVWVILFGEDRSYTIRFDGARWSRQRGAAPADVTVQTSPPEWVKFLSADPKGRRRWLRQQRAAGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMAKN*
Ga0079220_113535042	3300006806	Agricultural Soil	ALVVWGMDHALGQPRANEVIHPGRAIDATVRYLDHRRVRATRPTAWVIRFGDDRSYTIRFDGARWSRQRGDAPADVTVQTSPAEWVKFLGAKVEGRRRWLRKRRATGTRQRLDELATAFGEGSEHVRR*
Ga0075428_1001055283	3300006844	Populus Rhizosphere	LSERYELHGLHPGRAVAATVGYLNRRRVRAARRVVWGIFFGEDRSYTIRFDGLVVGTARSGTGDVTVQTSPPEWVRFLSADPKGRRRWLRRQRAAGTRQRLDELMTSSESY
Ga0075428_1025283231	3300006844	Populus Rhizosphere	FDALLVWGMDHALGSPRPGETIHPGRAMDATVRYLARRRIRPTPRRGWVFRFGDDRSYTIRFDGTTWIRERGEAPADVVVQTTPEEWVKFLSADVEGRRRWLRKRRAKGTKQRLDELATAFGPAHEAVTPRLGESLKE*
Ga0075434_1004964471	3300006871	Populus Rhizosphere	WGMDHALGPPRGGEAIHPGRTMDTMVRYLAYRRPEGTGRPTWVFRFGDDRSYTIRFDGARWTRQRGEAAADVLVQASPDEWVNFLSADVEDRRRWLRKRRAKGTRQRLDELATAFGAAHGVSGPPRENRRSSSRATAARGLNARN*
Ga0075434_1026678111	3300006871	Populus Rhizosphere	LEPVFDALLVWGMDYALGPPRHGEAIHPGRAIDATVRYLNRRRVRAERHVVWVIHFGEDRSYTVRFDGARWSRQRGAVPADVTLQTSPSEWVKFLSADPEGRRRWLRQRRAAGTRQRLDELMTSVGVLQQTLRSGERGSQRAPRAKN*
Ga0075429_1011599261	3300006880	Populus Rhizosphere	PVFDALLVWGMDHALGPPRRGEAIHPGRAMDAIVRYLAHRRPRGRRRMTWVFRFGDDRSYTIRFDGARWTRQRGEAEAAADVIVQTSPDEWVKFLSADPEGRRRWLRQQRATGTRQRLDELMTSFGVRRQTLRSREPGGQRAAMAKN*
Ga0075426_112235622	3300006903	Populus Rhizosphere	ALLVWGMDHALGPPRRGEAIHPGRAMDAIVRYLAHRRPRGRRRMTWVFRFGDDRSYTIRFDGARWTRQRGEAEAAADVIVQTSPDEWVKFLSADPEGRRRWLRQQRATGTRQRLDELMTSFGVRRQTLRSREPGGQRAAMAKN*
Ga0075436_1007148631	3300006914	Populus Rhizosphere	WVILFGEDRSYTIRFDGARWSRQRGAAPADVTVQTSPPEWVKFLSADPEGRRRWLRQQRATGTRQRLDELMTSFGVRRQTLRSREPGGQRAAMAKN*
Ga0099791_100908692	3300007255	Vadose Zone Soil	MDAIVRYLAHRRPRGTRRTSWVFRFGEDRSYTIRFDGARWTRQRGEAPADVIVQTSPDEWVNFLSADVEGRRRWLRKRRARGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMAKN*
Ga0099791_101777421	3300007255	Vadose Zone Soil	VFDALLVWGMDCALGPPRHGEAIHPGRAVDAAVRYLNRRRIRAERQVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVETSPPEWVKLLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTS
Ga0066709_1043861092	3300009137	Grasslands Soil	GRAIDATVRYLNRRRVRAARRVVWVILFGEDRSYTIRFDGARWSRQRGAAPADVTVQTSPPEWVKFLSADPKGRRRWLRQQRAAGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMAKN*
Ga0105248_111072693	3300009177	Switchgrass Rhizosphere	AGEREVRYRLTPKGEALEPVFDALLVWGMDYALGSPRHGEAIHPGRAIDATVRYLNRRRVRAARRVVWVILFGEDSSYTIRFDGARWARQRGAAPADVTVQTSPPEWVKFLSADPKGRRRWLRQQRATGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMAKN*
Ga0134082_100338071	3300010303	Grasslands Soil	HPGRAIDAAVRYLHRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKCLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRTAMAKN*
Ga0134088_103699982	3300010304	Grasslands Soil	GLPRHGEAIHPGRAIDATVRYLNRRRVRAARRVVWVILFGEDRSYTIRFDGARWSRQRGAAPADVTVQTSPPEWVKFLSADPKGRRRWLRQQRAAGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMAKN*
Ga0134109_102806132	3300010320	Grasslands Soil	VRSAENGNDGSRSRIDYELGAPRHGEAIHPGRAIDAAVRYLHRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVRTSPPEWVKCLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSCERGSRR
Ga0134086_100077375	3300010323	Grasslands Soil	VRWDSFAQSSELVRSAENGNDGSRSRIDYELGAPRHGEAIHPGRAIDAAVRYLHRRRVRVERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKCLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN*
Ga0134111_100911241	3300010329	Grasslands Soil	NDGSRSRIDYELGAPRHGEAIHPGRAIDAAVRYLNRRRVRAERHVAWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKCLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSCERGSRRAAMAKN*
Ga0134080_100290391	3300010333	Grasslands Soil	MARSLGPTTLKTGSVRWDSFAQSSELVRSAENGNDGSRSRIDYELGAPRHGEAIHPGRAIDAAVRYLHRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKCLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN*
Ga0134063_102947352	3300010335	Grasslands Soil	VRSAENGNDGSRSRIDYELGAPRHGEAIHPGRAIDAAVRYLHRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKCLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN*
Ga0126376_122273061	3300010359	Tropical Forest Soil	VFDALLVWGMDHALGPPRGREAIHPGRTMDAMVRYLARRRPRGPGRPTWVFRFGDDRSYTIRFDGARWTRQRGEAPADVIVQTSPDEWVSFLSADVEGRRRWLRTRRAKGTKQRLDELATAFGAPPSGSGHARENPSGS*
Ga0126378_122716121	3300010361	Tropical Forest Soil	ALLVWGMDHALGPPRGGEAIHPGRSIDAIVRYLAHRRPRGLSRPTWVFRFGDDRSYTIRFDGARWTRQRGEAPADVIVQTSPDEWVRFLSANVEGRRRWLRTRRAKGTKQRLDELATAFGSSPAGSGHAREN*
Ga0134128_123223431	3300010373	Terrestrial Soil	VFDALLIWGMDYALGSPRHGEAIHPGRAIDATVRYLNRRRVRAARRVVWVILFGEDSSYTIRFDGARWARQRGAAPADVTVQTSPPEWVKFLSADPKGRRRWLRQQRATGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMAKN*
Ga0134128_126151651	3300010373	Terrestrial Soil	FDALLVWGMDHALGPPRGGEAIHPGRTMDAIMRYLSHRRLRGRGRTTWVFRFGDDRSYPIHFDGARWTRQRGEAAADVIVQTSPDEWVNFLSEDVEGRRRWLRKRRAKGTRQRLDELATAFGAAHGVSRPLRSLSRATAARAGVAAASRPKA*
Ga0134127_108980803	3300010399	Terrestrial Soil	LLVWGMDYALGSPRHGEAIHPGRAIDATVRYLNRRRVRAARRVVWVILFGEDSSYTIRFDGARWSRQRGAAPADVTVQTSPPEWVKFLSADPKGRRRWLRQQRAAGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMVKN*
Ga0134121_120976091	3300010401	Terrestrial Soil	PVIDALVVWGMDHALGQPRAGEVIHPGRAIDATVRYLDHRRVRAAHPIAWVIRFGDDRSYTIRFDGARWSRQRGDAPADVTVQTSPIEWVKFLGADVEGRRRWLRKRRATGTRQRLGELATAFGAAQAALRSTRS*
Ga0137383_107951591	3300012199	Vadose Zone Soil	SSELVRSAENGNDGSRSRIDYELGAPRHGEAIHPGRAIDAAVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKCLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN*
Ga0137362_112855012	3300012205	Vadose Zone Soil	LTPKGQALESVFDALLVWGMDHALGPPRPGEAIHPGRAMDAIVRYLAHRRPRGTRRTTWVFRFGEDRSYTIRFDGARWTRQRGEAVADVIVQTSPDEWVKFLSADVEGRRRWLGKRRAKGTGQRLDELTTAFGAAHGASGPLP*
Ga0137381_106472922	3300012207	Vadose Zone Soil	MDYELGAPRHGEAIHPGRAIDAAVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDSTRWSRERGAASAYVTVQTSPPEWVKFLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN*
Ga0137377_100241523	3300012211	Vadose Zone Soil	VRWDSFAQSSELVRSAENGNDGSRSRIDYELGAPRHGEAIHPGRAIDAAVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWAKFLSADVEGRRRWVRERRASGTRGRLDELLTSFGAPRQTSRSCERGSRRAAMAKN*
Ga0137369_111193622	3300012355	Vadose Zone Soil	RHGEAIHPGRAIDATVRYLNRRQVRAGHHVVWVIHFKEGRSYTIRFDGTRWSRERGTAPADVTVQTSPPEWVTFLSADLEGRRRWLRERRASGTRQRLDELMTSFGVPRQTSRSREPGSQRPTMAKN*
Ga0137397_105535391	3300012685	Vadose Zone Soil	VFDALLVWGMDHALGPPRRGEAIHPGRAMDAIVRYLAHRRPRGTRRTTWVFRFGEDRSYTIRFDGARWTRQRGEAAADVIVQTSPDEWVKCLSADVEGRRRWLRKRRARGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMAKN*
Ga0137394_101269352	3300012922	Vadose Zone Soil	VRYLNRRRVRAARRVVWVILFGEDRSYTIRFDGARWSRQRGAAPADVTVQTSPPEWVKFLSADLKGRRRWLRQQRAPGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMAKN*
Ga0134077_100316281	3300012972	Grasslands Soil	RVRAERHVAWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKFLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN*
Ga0157379_121944491	3300014968	Switchgrass Rhizosphere	WVILFGEDSSYTIRFDGARWSRQRGAAPADVTVQTSPPEWVKFLSADPKGRRRWLRQQRATGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMVKN*
Ga0134085_100037686	3300015359	Grasslands Soil	VRWDSFAQSSELVRSAENGNDGSRSRIDYELGAPRHGEAIHPGRAIDAAVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKCLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN*
Ga0184605_100313302	3300018027	Groundwater Sediment	VIDALVVWGMDHALGQPRAGEVIHPGRAIDATVRYLDHRRVRAARPTAWVIRFGDDRSYTIRFDGARWSRQRGDAPADVTLQTSPAEWVKFLGADVEGRRRWLRRRRTTGTRQRLDELATAFGAAQAALRPTRS
Ga0066655_113482541	3300018431	Grasslands Soil	MDYELGAPRHGEAIHPGRAIDTAVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKCLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN
Ga0066667_101732723	3300018433	Grasslands Soil	LKTGSVRWDSFAQSSELVRSAENGNDGSRSRIDYELGAPRHGEAIHPGRAIDAAVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKCLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSCERGSRRAAMAKN
Ga0066669_110957711	3300018482	Grasslands Soil	EAIHPGRAIDAAVRYLHRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVRTSPPEWVKCLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSCERGSRRAAMAKN
Ga0193722_10281503	3300019877	Soil	GEEIQPGRAIDATVRYLNRRRVRAARRVVWAVHFGEDRSYTIRFDGARWSRQRGAAPADVTVQTSPPEWVKFLSTDPKGRRRWLRQQRAAGTRQRLDELMTSFGGGEQTPRSREPGSQRAAMARK
Ga0193728_11473612	3300019890	Soil	IDATVRYLNRRRVRAARRVVWAVHFGEDRSYTIRFDGARWSRQRGAAPADVTVQTSPPEWVKFLSADPKGRRRWLRQQRAAGTRQRLDELLTSFGVGQQTVRSREPGSQRAAMARK
Ga0207642_104248932	3300025899	Miscanthus Rhizosphere	MDYALGSPRHGEAIHPGRAIDATVRYLNRRRVRAARRVVWVILFGEDSSYTIRFDGARWARQRGAAPADVTVQTSPPEWVKFLSADPKGRRRWLRQQRATGTRQRLDELMTSFGVLQQTLRSREPGSPRAAMAKN
Ga0207675_1004106122	3300026118	Switchgrass Rhizosphere	EAIHPGRAIDATVRYLNRRRVRAARRVVWVILFGEDRSYTIRFDGARWSRQRGAAPADVTVRTSPPEWVKFLSADPEGQRRWLRQQRAAGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMAKN
Ga0209350_10362521	3300026277	Grasslands Soil	GAPRYGEAIHPGRAIDTAVRYLNRRRVRAERHVVWVIHFGADRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKFLSADVEGRRRWVRERRASETRGRLDELLTSCGAPRQTSRSRERGSRRAAMAKN
Ga0209235_10527423	3300026296	Grasslands Soil	MDSELGAPRHGESIHPGRAIDAAVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVETSPPEWVKFLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN
Ga0209237_10432593	3300026297	Grasslands Soil	MDSELGAPRHGESIHPGRAIDAAVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKFLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN
Ga0209236_10139418	3300026298	Grasslands Soil	LKTGSVRWDSFAQSSELVRSAENGNDGSRSRMDYELGAPRHGEAIHPGRAIDAAVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKFLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN
Ga0209238_11475772	3300026301	Grasslands Soil	APRHGEAIHPGRAIDAAVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKFLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN
Ga0209240_12116662	3300026304	Grasslands Soil	PGHLLAHRRPRGTRRTTWVFRFGEDRSYTIRFDGARWTRQRGEAAADVIVQTSPDEWVKCLSADVEGRRRWLRQQRAAGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMVKN
Ga0209468_10478411	3300026306	Soil	LKTGSVRWDSFAQSSELVRSAENGNDGSRSRIDYELGAPRHGEAIHPGRAIDAAVRYLNRRRVRAERHVAWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKCLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSCERGSRRAAMAKN
Ga0209469_10547251	3300026307	Soil	GEAIHPGRAIDAAVRYLHRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKCLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSCERGSRRAAMAKN
Ga0209239_10086767	3300026310	Grasslands Soil	LKTGSVRWDSFAQSSELVRSTENGNDGSRSRVDFELGAPRYGEAIHPGRAIDTAVRYLNRRRVRAERHVVWVIHFGADRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKFLSADVEGRRRWVRERRASETRGRLDELLTSCGAPRQTSRSRERGSRRAAMAKN
Ga0209268_10081662	3300026314	Soil	LKTGSVRWDSFAQSSELVRSAENGNDGSRSRIDYELGAPRHGEAIHPGRAIDAAVRYLHRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKCLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPGQTSRSCERGSRRAAMAKN
Ga0209470_12969881	3300026324	Soil	GRAIDATVRYLNRRRVRAARRVVWVILFGEDRSYTIRFDGARWSRQRGAAPADVTVQTSPPEWVKFLSADPKGRRRWLRQQRAAGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMAKN
Ga0209375_10549512	3300026329	Soil	VRWDSFAQSSELVRSAENGNDGSRSRIDYELGAPRHGEAIHPGRAIDAAVRYLHRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVRTSPPEWVKCLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSCERGSRRAAMAKN
Ga0209803_10344422	3300026332	Soil	LKTGSVRWDSFAQSSELVRSAENGNDGSRSRIDYELGAPRHGEAIHPGRAIDAAVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKFLSADVEGRRRWVRERRASETRGRLDELLTSCGAPRQTSRSRERGSRRAAMAKN
Ga0209158_10543043	3300026333	Soil	LKTGSVRWDSFAQSSELVRSAENGNDGSRSRMDYELGAPRHGEAIHPGRAIDTAVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKFLSADVEGRRRWVRERRASETRGRLDELLTSCGAPRQTSRSRERGSRRAAMAKN
Ga0209159_10551624	3300026343	Soil	LKTGSVRWDSFAQSSELVRSAENGNDGSRSRIDYELGAPRHGEAIHPGRAIDAAVRYLHRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVRTSPPEWVKCLSADVEGRRRWLRERRASGTRGRLDELLTSFGAP
Ga0257166_10016823	3300026358	Soil	RRVVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKFLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN
Ga0257171_10039133	3300026377	Soil	VFDALLVWGRDHGLGPPRRGEAIHPGRAMDAIVRYLAHRRPRGTRRTSWVFRFGEDRSYTIRFDGARWTRQRGEAAADVIVQTSPDEWVKCLSADVEGRRRWLRQQRAAGTRQRLDELMTSFGVLQQT
Ga0209690_10350962	3300026524	Soil	LKTGSVRWDSFAQSSELVRSAENGNDGSRSRMDYELGAPRHGEAIHPGRAIDAAVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKFLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSCERGSRRAAMAKN
Ga0209690_10649621	3300026524	Soil	PGRAIDATVRYLNRRRVRAARRVVWVILFGEDRSYTIRFDGARWSRQRGAAPADVTVQTSPPEWVKFLSADPKGRRRWLRQQRAAGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMAKN
Ga0209157_12955981	3300026537	Soil	AVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKFLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN
Ga0209805_13650732	3300026542	Soil	AVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAAPADVTVQTSPPEWVKFLSADPKGRRRWLRQQRAAGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMAKN
Ga0209879_10510751	3300027056	Groundwater Sand	RVVWVTLFGEDRSYTIRFDGARWSRQRGAAPADVTVQTSPPEWVKFLSADPKGRRRWLRQQRAAGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMAKN
Ga0209388_10548602	3300027655	Vadose Zone Soil	RYLAHRRPRGTRRTSWVFRFGEDRSYTIRFDGARWTRQRGEAPADVIVQTSPDEWVNFLSADVEGRRRWLRKRRARGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMAKN
Ga0209689_10662232	3300027748	Soil	MDYELGAPRHGEAIHPGRAIDAAVRYLNRRRVRAERHVVWVIHFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKCLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSCERGSRRAAMAKN
Ga0209481_100692513	3300027880	Populus Rhizosphere	LEPVFDALLVWGMDHALGPPRRGEAIHPGRAMDAIVRYLAQRRTRGARRMAWVFRFGDDRSYTIRFNGTRWIRQRGEAAADVVVQTTAEEWVKFLSTDVEGRRRWLRKRRATGTRQRLDELATAFGPAHDAGSETATIRRVDIRR
Ga0268264_102422591	3300028381	Switchgrass Rhizosphere	DSSYTIRFDGARWSRQRGAAPADVTVQTSPPEWVKFLSADPKGRRRWLRQQRATGTRQRLDELMTSFGVLQQTLRSREPGSQRAAMVKN
Ga0318574_109333411	3300031680	Soil	LTPKGQALEPVFDALLVWGMDHALGPPRRGEAIHPGRAMDTIVRYLTHRRPQGMGRPTWVFRFGDDRSYTIRFDGARWSRQRGEAVADVIVQTSPDEWVNFLSADPEGRRRWLRKRRAKGTRQRLDQLAAAFGTAPGGPGHSRENRRSGS
Ga0318497_104641651	3300031805	Soil	FDALLVWGMDHALGPPRRGEAIHPGRAIDATVRYLARRRTRAARRITWVFRFGDDRSYTIRFDGARWTRERGEDGGDVVVRTSPEEWVEFLSTDIEGRHRWLRQRHATGTRPRLDELATAFGPADATPGRTR
Ga0310909_105893581	3300031947	Soil	QALEPVFDALLVWGMDHALGPPRRGEAIHPGRAMDTIVRYLTHRRPQGMGRPTWVFRFGDDRSYTIRFDGARWSRQRGEAVADVIVQTSPDEWVNFLSADPEGRRRWLRKRRAKGTRQRLDQLAAAFGTAPGGPGHSRENRRSGS
Ga0307470_116322872	3300032174	Hardwood Forest Soil	IGEREVRYRLTPKGQALEPVFDALLVWGMYYALGAPRHGEAIRAERHVVWVISFGEDRSYTIRFDGTRWSRQRGAASADVTVQTSPPEWVKFLSADVEGRRRWLRERRASGTRGRLDELLTSFGAPRQTSRSRERGSRRAAMAKN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100868

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences