Metagenome Family F100969

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100969
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	46 residues
Representative Sequence	QFECTAEMEKDAWPLQKKYLKEVHNYIWNYDILWYMVISDCGQY
Number of Associated Samples	57
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	85.29 %
Associated GOLD sequencing projects	44
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (78.431 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (82.353 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (98.039 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 77.27% β-sheet: 0.00% Coil/Unstructured: 22.73%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF03031	NIF	8.82
PF01844	HNH	6.86
PF01713	Smr	3.92
PF02622	DUF179	2.94
PF00266	Aminotran_5	2.94
PF03900	Porphobil_deamC	1.96
PF14743	DNA_ligase_OB_2	1.96
PF00535	Glycos_transf_2	0.98
PF00011	HSP20	0.98
PF13544	Obsolete Pfam Family	0.98
PF07432	Hc1	0.98
PF01370	Epimerase	0.98
PF08406	CbbQ_C	0.98
PF08443	RimK	0.98
PF00565	SNase	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG5190	TFIIF-interacting CTD phosphatase, includes NLI-interacting factor	Transcription [K]	8.82
COG1678	Putative transcriptional regulator, AlgH/UPF0301 family	Transcription [K]	2.94
COG0181	Porphobilinogen deaminase	Coenzyme transport and metabolism [H]	1.96
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG0714	MoxR-like ATPase	General function prediction only [R]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.43 %
All Organisms	root	All Organisms	21.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.43 %
Viruses	superkingdom	All Organisms → Viruses	14.71 %
cellular organisms	root	All Organisms → cellular organisms	6.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.43 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	6.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.88 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	4.90 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	3.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.88 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	4.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.92 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	3.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.88 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	4.90 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	3.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.88 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	4.90 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	3.92 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.88 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	4.90 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	3.92 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.88 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	4.90 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	3.92 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002484\|JGI25129J35166_1014113	Not Available	1974	Open in IMG/M
3300002484\|JGI25129J35166_1038992	Not Available	964	Open in IMG/M
3300002514\|JGI25133J35611_10073124	Not Available	1074	Open in IMG/M
3300002514\|JGI25133J35611_10093333	Not Available	900	Open in IMG/M
3300002518\|JGI25134J35505_10056387	Not Available	966	Open in IMG/M
3300002519\|JGI25130J35507_1013595	Not Available	1992	Open in IMG/M
3300002519\|JGI25130J35507_1105324	Not Available	509	Open in IMG/M
3300005398\|Ga0066858_10217365	Not Available	549	Open in IMG/M
3300005425\|Ga0066859_10207308	Not Available	576	Open in IMG/M
3300005516\|Ga0066831_10139727	Not Available	658	Open in IMG/M
3300005551\|Ga0066843_10004944	All Organisms → Viruses → Predicted Viral	4370	Open in IMG/M
3300005551\|Ga0066843_10005804	All Organisms → cellular organisms → Bacteria	4031	Open in IMG/M
3300005551\|Ga0066843_10103915	Not Available	818	Open in IMG/M
3300005551\|Ga0066843_10112884	Not Available	780	Open in IMG/M
3300005551\|Ga0066843_10185807	Not Available	585	Open in IMG/M
3300005592\|Ga0066838_10059000	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1090	Open in IMG/M
3300005593\|Ga0066837_10084293	Not Available	1179	Open in IMG/M
3300005595\|Ga0066833_10142270	Not Available	658	Open in IMG/M
3300005595\|Ga0066833_10156709	Not Available	625	Open in IMG/M
3300005595\|Ga0066833_10188460	Not Available	566	Open in IMG/M
3300005596\|Ga0066834_10040479	Not Available	1591	Open in IMG/M
3300005603\|Ga0066853_10002988	Not Available	6376	Open in IMG/M
3300006090\|Ga0082015_1013906	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1380	Open in IMG/M
3300006093\|Ga0082019_1002274	Not Available	4231	Open in IMG/M
3300006093\|Ga0082019_1035122	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	925	Open in IMG/M
3300006093\|Ga0082019_1043368	Not Available	816	Open in IMG/M
3300006736\|Ga0098033_1030608	All Organisms → Viruses → Predicted Viral	1633	Open in IMG/M
3300006736\|Ga0098033_1081258	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	931	Open in IMG/M
3300006736\|Ga0098033_1150875	Not Available	651	Open in IMG/M
3300006736\|Ga0098033_1152789	Not Available	646	Open in IMG/M
3300006736\|Ga0098033_1159044	Not Available	631	Open in IMG/M
3300006736\|Ga0098033_1185371	Not Available	578	Open in IMG/M
3300006738\|Ga0098035_1141256	Not Available	822	Open in IMG/M
3300006738\|Ga0098035_1170112	Not Available	735	Open in IMG/M
3300006750\|Ga0098058_1006700	Not Available	3510	Open in IMG/M
3300006750\|Ga0098058_1192208	Not Available	532	Open in IMG/M
3300006751\|Ga0098040_1152309	Not Available	684	Open in IMG/M
3300006751\|Ga0098040_1159122	Not Available	667	Open in IMG/M
3300006751\|Ga0098040_1254310	Not Available	508	Open in IMG/M
3300006753\|Ga0098039_1110271	Not Available	946	Open in IMG/M
3300006753\|Ga0098039_1221491	Not Available	639	Open in IMG/M
3300006754\|Ga0098044_1089416	Not Available	1269	Open in IMG/M
3300006754\|Ga0098044_1112287	Not Available	1111	Open in IMG/M
3300006902\|Ga0066372_10446333	Not Available	754	Open in IMG/M
3300006926\|Ga0098057_1187253	Not Available	505	Open in IMG/M
3300006927\|Ga0098034_1001827	Not Available	7692	Open in IMG/M
3300006927\|Ga0098034_1181529	Not Available	589	Open in IMG/M
3300006927\|Ga0098034_1240269	Not Available	501	Open in IMG/M
3300010151\|Ga0098061_1056555	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1517	Open in IMG/M
3300010151\|Ga0098061_1322088	Not Available	529	Open in IMG/M
3300010155\|Ga0098047_10010822	Not Available	3714	Open in IMG/M
3300010155\|Ga0098047_10364298	Not Available	543	Open in IMG/M
3300017702\|Ga0181374_1044018	Not Available	767	Open in IMG/M
3300017704\|Ga0181371_1039986	Not Available	767	Open in IMG/M
3300017705\|Ga0181372_1030069	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	920	Open in IMG/M
3300017705\|Ga0181372_1052107	Not Available	691	Open in IMG/M
3300017715\|Ga0181370_1005345	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1661	Open in IMG/M
3300020330\|Ga0211572_1123954	Not Available	581	Open in IMG/M
3300020364\|Ga0211538_1025048	All Organisms → Viruses → Predicted Viral	1992	Open in IMG/M
3300020364\|Ga0211538_1234470	Not Available	513	Open in IMG/M
3300020478\|Ga0211503_10235736	Not Available	1017	Open in IMG/M
3300022225\|Ga0187833_10086806	Not Available	2039	Open in IMG/M
3300022225\|Ga0187833_10236490	Not Available	1049	Open in IMG/M
3300022227\|Ga0187827_10096969	Not Available	2193	Open in IMG/M
3300022227\|Ga0187827_10168838	All Organisms → cellular organisms → Bacteria → Proteobacteria	1521	Open in IMG/M
3300022227\|Ga0187827_10185341	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1429	Open in IMG/M
3300022227\|Ga0187827_10268476	All Organisms → Viruses → Predicted Viral	1115	Open in IMG/M
3300022227\|Ga0187827_10275406	Not Available	1096	Open in IMG/M
3300022227\|Ga0187827_10291002	Not Available	1056	Open in IMG/M
3300022227\|Ga0187827_10319213	Not Available	993	Open in IMG/M
3300022227\|Ga0187827_10379909	Not Available	883	Open in IMG/M
3300022227\|Ga0187827_10488892	Not Available	741	Open in IMG/M
3300025072\|Ga0208920_1016061	All Organisms → Viruses → Predicted Viral	1641	Open in IMG/M
3300025078\|Ga0208668_1005620	Not Available	2929	Open in IMG/M
3300025078\|Ga0208668_1012184	Not Available	1849	Open in IMG/M
3300025082\|Ga0208156_1000280	Not Available	22265	Open in IMG/M
3300025082\|Ga0208156_1010025	Not Available	2325	Open in IMG/M
3300025082\|Ga0208156_1063743	Not Available	713	Open in IMG/M
3300025097\|Ga0208010_1076089	Not Available	713	Open in IMG/M
3300025097\|Ga0208010_1116886	Not Available	538	Open in IMG/M
3300025109\|Ga0208553_1023377	All Organisms → cellular organisms → Bacteria	1625	Open in IMG/M
3300025109\|Ga0208553_1091930	Not Available	710	Open in IMG/M
3300025112\|Ga0209349_1093474	Not Available	867	Open in IMG/M
3300025118\|Ga0208790_1212757	Not Available	503	Open in IMG/M
3300025122\|Ga0209434_1208948	Not Available	502	Open in IMG/M
3300025131\|Ga0209128_1026523	All Organisms → cellular organisms → Bacteria	2421	Open in IMG/M
3300025131\|Ga0209128_1066951	All Organisms → Viruses → Predicted Viral	1247	Open in IMG/M
3300025151\|Ga0209645_1126009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	808	Open in IMG/M
3300025776\|Ga0208699_1017868	Not Available	943	Open in IMG/M
3300026202\|Ga0207984_1101312	Not Available	683	Open in IMG/M
3300026202\|Ga0207984_1109540	Not Available	649	Open in IMG/M
3300026205\|Ga0208406_1002176	Not Available	6868	Open in IMG/M
3300026205\|Ga0208406_1076340	Not Available	788	Open in IMG/M
3300026206\|Ga0207988_1119477	Not Available	598	Open in IMG/M
3300026211\|Ga0208132_1038584	Not Available	1190	Open in IMG/M
3300026260\|Ga0208408_1095976	Not Available	885	Open in IMG/M
3300026261\|Ga0208524_1081002	Not Available	890	Open in IMG/M
3300026263\|Ga0207992_1090789	Not Available	817	Open in IMG/M
3300026267\|Ga0208278_1015047	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	2167	Open in IMG/M
3300026268\|Ga0208641_1081630	Not Available	941	Open in IMG/M
3300031801\|Ga0310121_10359535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	837	Open in IMG/M
3300032820\|Ga0310342_101374650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	838	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	96.08%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	96.08%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.92%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	82.35%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	11.76%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	3.92%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.98%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002484	Marine viral communities from the Pacific Ocean - ETNP_2_130	Environmental	Open in IMG/M
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental	Open in IMG/M
3300002518	Marine viral communities from the Pacific Ocean - ETNP_6_100	Environmental	Open in IMG/M
3300002519	Marine viral communities from the Pacific Ocean - ETNP_2_300	Environmental	Open in IMG/M
3300005398	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201	Environmental	Open in IMG/M
3300005425	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199	Environmental	Open in IMG/M
3300005516	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF49B	Environmental	Open in IMG/M
3300005551	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF89A	Environmental	Open in IMG/M
3300005592	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV89	Environmental	Open in IMG/M
3300005593	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86	Environmental	Open in IMG/M
3300005595	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF47B	Environmental	Open in IMG/M
3300005596	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF43B	Environmental	Open in IMG/M
3300005603	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61	Environmental	Open in IMG/M
3300006090	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP124	Environmental	Open in IMG/M
3300006093	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP189	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300006926	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG	Environmental	Open in IMG/M
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental	Open in IMG/M
3300017702	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_10 viral metaG	Environmental	Open in IMG/M
3300017704	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaG	Environmental	Open in IMG/M
3300017705	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaG	Environmental	Open in IMG/M
3300017715	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_06 viral metaG	Environmental	Open in IMG/M
3300020330	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556097-ERR599147)	Environmental	Open in IMG/M
3300020364	Marine microbial communities from Tara Oceans - TARA_B100000097 (ERX556021-ERR599037)	Environmental	Open in IMG/M
3300020478	Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX556025-ERR599111)	Environmental	Open in IMG/M
3300022225	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300025072	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)	Environmental	Open in IMG/M
3300025078	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)	Environmental	Open in IMG/M
3300025082	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)	Environmental	Open in IMG/M
3300025097	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)	Environmental	Open in IMG/M
3300025109	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)	Environmental	Open in IMG/M
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental	Open in IMG/M
3300025118	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)	Environmental	Open in IMG/M
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental	Open in IMG/M
3300025131	Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300025776	Marine microbial communities from the Deep Pacific Ocean - MP2097 (SPAdes)	Environmental	Open in IMG/M
3300026202	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF43B (SPAdes)	Environmental	Open in IMG/M
3300026205	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF89A (SPAdes)	Environmental	Open in IMG/M
3300026206	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV74 (SPAdes)	Environmental	Open in IMG/M
3300026211	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199 (SPAdes)	Environmental	Open in IMG/M
3300026260	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67 (SPAdes)	Environmental	Open in IMG/M
3300026261	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61 (SPAdes)	Environmental	Open in IMG/M
3300026263	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255 (SPAdes)	Environmental	Open in IMG/M
3300026267	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259 (SPAdes)	Environmental	Open in IMG/M
3300026268	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253 (SPAdes)	Environmental	Open in IMG/M
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25129J35166_10141131	3300002484	Marine	AEMEKDAWPLQKKYLKEVHNYIWDYDILWYMVISDCGQH*
JGI25129J35166_10389921	3300002484	Marine	MNNAQFKCTAEMEKDAWPLQKKYLKEVHSYIWNYDELWYMVISDCGQY*
JGI25133J35611_100731241	3300002514	Marine	MNNTQFECTAEMEKDAWPLQKKYLKEVHNYIWNYDILWYLVISDCGQY*
JGI25133J35611_100933331	3300002514	Marine	FECTAEMEKDVWPLQKKYLKEVHNYIWNYDIFWYLVISNCGQY*
JGI25134J35505_100563872	3300002518	Marine	AEMEKDAWPLQKKYLKEVHNYIWNYDILWYLVISDCGQY*
JGI25130J35507_10135951	3300002519	Marine	KCTAEMEKDAWPLQKKYLKEVHNYLWDYDILWYMVISDCGQH*
JGI25130J35507_11053241	3300002519	Marine	QFECTAEMEKDAWPLQKKYLKEVHNYIWNFDILWYMVISDCGQY*
Ga0066858_102173652	3300005398	Marine	QFECTAEMEKDAWPLQKKYLKEVHNYIWDYNILWYMVISDCGQY*
Ga0066859_102073081	3300005425	Marine	LQDMNNTQFECTAEMEKDAWPLQKKYLKEVHNYIWNFDILWYMVISDCGQY*
Ga0066831_101397271	3300005516	Marine	LQDMNNTQFECTAEMEKDAWPLQKKYLKEVHNYIWNFDILWYLVISDCGQY*
Ga0066843_100049449	3300005551	Marine	KDAWPLQKKYLKEVHNYIWNYDILWYMVISDCGQY*
Ga0066843_1000580410	3300005551	Marine	EVIHYLQDMNNAQFECTAEMEKDAWPLQKKYLKEVHNYIWDYNILWYLVISDCGQY*
Ga0066843_101039152	3300005551	Marine	DMNNAQFECTAEMEKDAWPLQKKYLKEVHNYIWDYNILWYLIISDCGQY*
Ga0066843_101128843	3300005551	Marine	LHEVIHYLQDMNNAQFKCTAEMEKDAWPLQKKYLKEVHSYIWNYDELWYMVISDCGQY*
Ga0066843_101858071	3300005551	Marine	AEMEKDAWPLQKKYLKEVHNYIWDYDILWYLVISDCGQY*
Ga0066838_100590001	3300005592	Marine	AEMEKDAWPLQKKYLKEVHNYIWDYNILWYLVISDCGQY*
Ga0066837_100842931	3300005593	Marine	MNNAQFKCTAEMEKDAWPLQKKYLKEVHNYIWDYDILWYLVISDCGHY*
Ga0066833_101422702	3300005595	Marine	TAEMEKDAWPLQKKYLKEVHNYIWNYDILWYMVISDCGQY*
Ga0066833_101567091	3300005595	Marine	TAEMEKDAWPLQKKYLKEVHNYIWDYDILWYLVISDCGQY*
Ga0066833_101884601	3300005595	Marine	NAQFECTAEMEKDAWPLQKKYLKEVHNYIWDYDILWYMVISDCGQH*
Ga0066834_100404795	3300005596	Marine	HEVIHYLQDMNNTQFECTAEMEKDAWPLQKKYLKEVHNYMWNYDILWYLVISDCGQY*
Ga0066853_100029881	3300005603	Marine	MNNTQFECTAEMEKDAWPLQKKYLKEVHSYIWNYDILWYMVISDCIAGIYPKYR*
Ga0082015_10139063	3300006090	Marine	DMNNTQFECTAEMEKDAWPLQKKYLKEVHNYIWDYNILWYLVISDCGQY*
Ga0082019_10022749	3300006093	Marine	NNAQFKCTAEMEKDAWPLQKKYLKEVHNYIWDYNILWYLVISDCGQY*
Ga0082019_10351221	3300006093	Marine	KCTAEMEKDAWPLQKKYLKEVHNYIWDYDILWYMVISDCGQH*
Ga0082019_10433683	3300006093	Marine	GVLLHEVIHYLQDMNNTQFECTAEMEKDAWPLQKKYLKEVHNYIWNYDILWYMVISDCGQY*
Ga0098033_10306083	3300006736	Marine	QFKCTAEMEKDAWPLQKKYLKEVHNYIWDYNILWYLIISDCGQY*
Ga0098033_10812581	3300006736	Marine	QDMNNAQFKCTAEMEKDAWPLQKKYLKEVHNYIWDYDILWYMVISDCGQH*
Ga0098033_11508751	3300006736	Marine	QDMNNAQFKCTAEMEKDAWPLQKKYLKEVHNYIWDYDILWYLVISDCGQY*
Ga0098033_11527891	3300006736	Marine	QDMNNAQFKCTAEMEKDAWPLQKKYLKEVHSYIWNYDELWYMVISDCGQY*
Ga0098033_11590441	3300006736	Marine	CTAEMEKDAWPLQKKYLKEVHNYIWDYDILWYMVISDCGQY*
Ga0098033_11853711	3300006736	Marine	LHEVIHYLQDMNNTQFECTAEMEKDAWPLQKKYLKEVHNYIWNYDILWYLVISDCGQY*
Ga0098035_11412562	3300006738	Marine	EKDAWPLQKKYLKEVHNYIWNYDILWYLVISDCGQY*
Ga0098035_11701121	3300006738	Marine	DAWPLQKKYLKEVHNYIWDYDILWYMVISDCGQY*
Ga0098058_10067009	3300006750	Marine	NAQFKCTAEMEKDAWPLQKKYLKEVHNYIWDYNILWYLVISDCGQY*
Ga0098058_11922081	3300006750	Marine	EMEKDAWPLQKKYLKEVHNYIWNFDILWYMVISDCGQY*
Ga0098040_11523091	3300006751	Marine	MNNTQFECTAEMEKDAWPLQKKYLKEVHNYIWNYDILWYLVISNCGQY*
Ga0098040_11591223	3300006751	Marine	TQFECTAEMEKDAWPLQKKYLKEVHNYIWNYDILWYLVISDCGQY*
Ga0098040_12543103	3300006751	Marine	DAWPLQKKYLKEVHNYIWNFDILWYLVISDCGQY*
Ga0098039_11102713	3300006753	Marine	NNTQFECTAEMEKDAWPLQKKYLKEVHNYIWNFDILWYLVISDCGQY*
Ga0098039_12214911	3300006753	Marine	QFECTAEMEKDAWPLQKKYLKEVHNYIWNYDILWYMVISDCGQY*
Ga0098044_10894164	3300006754	Marine	QDMNNAQFKCTAEMEKDAWPLQKKYLKEVHSYIWNYDELWYMVISDCGQH*
Ga0098044_11122871	3300006754	Marine	EMEKDAWPLQKKYLKEVHNYIWDYNILWYLVISDCGQY*
Ga0066372_104463331	3300006902	Marine	KFNCTAEMEKEAWPLQQKYLKEEHDYIWDYDQLWFMVISTCGPYDPY*
Ga0098057_11872531	3300006926	Marine	QDMNNAQFKCTAEMEKDAWPLQKKYLKEVHNYIWDYDILWYLVISDCGHY*
Ga0098034_100182719	3300006927	Marine	VLLHEVIHYLQDMNNAQFKCTAEMEKDAWPLQKKYLKEVHNYIWDYDILWYMVISDCGQY
Ga0098034_11815292	3300006927	Marine	HEVIHYLQDMNNAQFECTAEMEKDAWPLQKKYLKEVHNYIWNFDILWYLVISDCGQY*
Ga0098034_12402691	3300006927	Marine	FECTAEMEKDAWPLQKKYLKEVHNYIWDYDILWYMVISDCGQY*
Ga0098061_10565551	3300010151	Marine	HEVIHYLQDMNNTQFECTAEMEKDAWPLQKKYLKEVHNYIWDYDILWYMVISDCGQH*
Ga0098061_13220881	3300010151	Marine	HEVIHYLQDMNNTQFECTAEMEKDAWPLQKKYLKEVHNYIWNYDILWYLVISDCGQY*
Ga0098047_100108229	3300010155	Marine	QDMNNAQFKCTAEMEKDAWPLQKKYLKEVHNYIWDYDILWYMVISDCGQY*
Ga0098047_103642981	3300010155	Marine	DMNNTQFECTAEMEKDAWPLQKKYLKEVHNYIWNFDILWYLVISDCGQY*
Ga0181374_10440183	3300017702	Marine	FKCTAEMEKDAWPLQKKYLKEVHNYIWNYDILWYLVISDCGQY
Ga0181371_10399861	3300017704	Marine	NTQFECTAEMEKDAWPLQKKYLKEVHNYIWNYDILWYLVISDCGQY
Ga0181372_10300691	3300017705	Marine	NAQFKCTAEMEKDAWPLQKKYLKEVHNYIWDYDILWYMVISDCGQH
Ga0181372_10521073	3300017705	Marine	QDMNNAQFKCTAEMEKDAWPLQKKYLKEVHNYIWDYDILWYLVISDCGQY
Ga0181370_10053451	3300017715	Marine	QDMNNAQFKCTAEMEKDAWPLQKKYLKEVHNYIWDYDILWYMVISDCGQH
Ga0211572_11239541	3300020330	Marine	IHYLQDMNNTQFECTAEMEKDAWPLQKKYLKEVHNYIWNYDILWYLVISDCGQY
Ga0211538_10250481	3300020364	Marine	FECTAEMEKDAWPLQKKYLKEVHNYTWNYDILWYLVISDCGQY
Ga0211538_12344701	3300020364	Marine	FECTAEMEKDAWPLQKKYLKEVHNYIWNFDILWYLVISDCGQY
Ga0211503_102357363	3300020478	Marine	EAWPLQQKYLKEEHDYIWDYDELWFMVISTCGQYSH
Ga0187833_100868061	3300022225	Seawater	VIHYLQDMNNAQFKCTAEMEKDAWPLQKKYLKEVHNYLWDYDILWYMVISDCGQH
Ga0187833_102364901	3300022225	Seawater	TAEMEKDAWPLQKKYLKEVHNYIWNYDILWYLVISDCGQY
Ga0187827_100969691	3300022227	Seawater	AEMEKDAWPLQKKYLKEVHNYIWNYDILWYLVISDCGQY
Ga0187827_101688383	3300022227	Seawater	MEKDAWPLQKKYLKEVHNYIWDYDILWYMVISDCGQH
Ga0187827_101853411	3300022227	Seawater	KCTAEMEKDAWPLQKKYLKEVHNYIWDYDILWYMVISDCGQY
Ga0187827_102684764	3300022227	Seawater	CTAEMEKDAWPLQKKYLKEVHNYIWNYDILWYMVISDCGQY
Ga0187827_102754062	3300022227	Seawater	KDAWPLQKKYLKEVHNYIWNFDILWYLVISDCGQY
Ga0187827_102910021	3300022227	Seawater	MEKDAWPLQKKYLKEVHNYIWNYDILWYLVISDCGQY
Ga0187827_103192134	3300022227	Seawater	NAQFKCTAEMEKDAWPLQKKYLKEVHNYIWDYNILWYLVISDCGQY
Ga0187827_103799091	3300022227	Seawater	ECTAEMEKDVWPLQKKYLKEVHNYIWNYDILWYLVISNCGQY
Ga0187827_104888923	3300022227	Seawater	EKDAWPLQKKYLKEVHSYIWDYDELWYMVISDCGQY
Ga0208920_10160613	3300025072	Marine	MEKDAWPLQKKYLKEVHNYIWNFDILWYMVISDCGQY
Ga0208668_10056201	3300025078	Marine	VIHYLQDMNNAQFKCTAEMEKDAWPLQKKYLKEVHNYIWDYDILWYMVISDCGQY
Ga0208668_10121847	3300025078	Marine	KCTAEMEKDAWPLQKKYLKEVHNYIWDYDILWYLVISDCGHY
Ga0208156_10002801	3300025082	Marine	ECTAEMEKDAWPLQKKYLKEVHNYIWNYDILWYMVISDCGQY
Ga0208156_10100257	3300025082	Marine	LQDMNNAQFKCTAEMEKDAWPLQKKYLKEVHNYIWDYDILWYMVISDCGQH
Ga0208156_10637431	3300025082	Marine	LQDMNNAQFKCTAEMEKDAWPLQKKYLKEVHNYIWDYDILWYLVISDCGHY
Ga0208010_10760891	3300025097	Marine	LQDMNNAQFKCTAEMEKDAWPLQKKYLKEVHNYIWDYDILWYLVISDCGQY
Ga0208010_11168862	3300025097	Marine	KDAWPLQKKYLKEVHNYIWNYDILWYLVISDCGQY
Ga0208553_10233775	3300025109	Marine	AEMEKDAWPLQKKYLKEVHNYIWDYDILWYMVISDCGQY
Ga0208553_10919301	3300025109	Marine	DMNNAQFKCTAEMEKDAWPLQKKYLKEVHNYIWDYDILWYLVISDCGHY
Ga0209349_10934744	3300025112	Marine	QDMNNAQFKCTAEMEKDAWPLQKKYLKEVHSYIWNYDELWYMVISDCGQY
Ga0208790_12127571	3300025118	Marine	MEKDAWPLQKKYLKEVHNYIWDYNILWYLVISDCGQY
Ga0209434_12089482	3300025122	Marine	KDAWPLQKKYLKEVHNYIWNYNVLWYLVISDCGQY
Ga0209128_10265231	3300025131	Marine	IHYLQDMNNAQFKCTAEMEKDAWPLQKKYLKEVHNYIWDYDILWYMVISDCGQY
Ga0209128_10669514	3300025131	Marine	IHYLQDMNNTQFECTAEMEKDVWPLQKKYLKEVHNYIWNYDILWYLVISNCGQY
Ga0209645_11260091	3300025151	Marine	YLQDMNKMQFNCTKEMERDVWPIQKNYLKKVHNFDWDYDELWYMVISTCDPTGL
Ga0208699_10178681	3300025776	Deep Ocean	HYLQDMNNTQFECTAEMEKDAWPLQKKYLKEVHNYIWNYDILWYLVISDCGQY
Ga0207984_11013121	3300026202	Marine	DMNNAQFECTAEMEKDAWPLQKKYLKEVHNYIWNFDILWYMVISDCGQY
Ga0207984_11095401	3300026202	Marine	DMNNAQFECTAEMEKDAWPLQKKYLKEVHNYIWDYNILWYLVISDCGQY
Ga0208406_100217612	3300026205	Marine	EMEKDAWPLQKKYLKEVHNYIWNYDILWYMVISDCGQY
Ga0208406_10763402	3300026205	Marine	AEMEKDAWPLQKKYLKEVHNYIWDYNILWYLIISDCGQY
Ga0207988_11194773	3300026206	Marine	KDAWPLQKKYLKEVHNYIWDYDILWYLVISDCGHY
Ga0208132_10385843	3300026211	Marine	QFECTAEMEKDAWPLQKKYLKEVHNYIWNFDILWYLVISDCGQY
Ga0208408_10959764	3300026260	Marine	NNTQFECTAEMEKDVWPLQKKYLKEVHNYIWNYDILWYLVISNCGQY
Ga0208524_10810024	3300026261	Marine	EMEKDAWPLQKKYLKEVHNYIWNYDILWYLVISNCGQY
Ga0207992_10907891	3300026263	Marine	EKDAWPLQKKYLKEVHNYIWDYDILWYMVISDCGQH
Ga0208278_10150474	3300026267	Marine	DMNNAQFECTAEMEKDAWPLQKKYLKEVHNYIWDYDILWYMVISDCGQY
Ga0208641_10816304	3300026268	Marine	LQDMNNTQFECTAEMEKDVWPLQKKYLKEVHNYIWNYDILWYLVISNCGQY
Ga0310121_103595351	3300031801	Marine	LLHYIQDMNNVSFLCVAEMERETWPLQQKYLKEVHNFDWDYDKLWYLLISTCPSGIN
Ga0310342_1013746502	3300032820	Seawater	VHEIIHYLQDVNNVQFRCTAEMELDAWPLQKQYLANVHNYYWEYNGLWHLMISQCPNPTN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100969

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences