NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F101042

Metagenome / Metatranscriptome Family F101042

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F101042
Family Type Metagenome / Metatranscriptome
Number of Sequences 102
Average Sequence Length 39 residues
Representative Sequence MTVNQAKLVNANADTFDFSAMSFTGNTVRGAANESRFALAA
Number of Associated Samples 70
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 34.31 %
% of genes near scaffold ends (potentially truncated) 26.47 %
% of genes from short scaffolds (< 2000 bps) 69.61 %
Associated GOLD sequencing projects 63
AlphaFold2 3D model prediction Yes
3D model pTM-score0.17

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (59.804 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake
(29.412 % of family members)
Environment Ontology (ENVO) Unclassified
(78.431 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(86.275 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 5.80%    β-sheet: 0.00%    Coil/Unstructured: 94.20%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.17
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF00313CSD 26.47
PF00578AhpC-TSA 7.84
PF07437YfaZ 6.86
PF13505OMP_b-brl 4.90
PF02915Rubrerythrin 4.90
PF04304DUF454 3.92
PF05488PAAR_motif 3.92
PF07012Curlin_rpt 1.96
PF137592OG-FeII_Oxy_5 1.96
PF03401TctC 0.98
PF00301Rubredoxin 0.98
PF00149Metallophos 0.98
PF12849PBP_like_2 0.98
PF09694Gcw_chp 0.98
PF05221AdoHcyase 0.98
PF13946DUF4214 0.98
PF00085Thioredoxin 0.98
PF104171-cysPrx_C 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG2832Uncharacterized membrane protein YbaN, DUF454 familyFunction unknown [S] 3.92
COG4104Zn-binding Pro-Ala-Ala-Arg (PAAR) domain, involved in Type VI secretionIntracellular trafficking, secretion, and vesicular transport [U] 3.92
COG0499S-adenosylhomocysteine hydrolaseCoenzyme transport and metabolism [H] 0.98
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 0.98


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A59.80 %
All OrganismsrootAll Organisms40.20 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2035265000|ErSWdraf_F5BXKTZ02HPAOSNot Available508Open in IMG/M
3300001605|Draft_10029772Not Available4926Open in IMG/M
3300002835|B570J40625_100390154Not Available1359Open in IMG/M
3300003277|JGI25908J49247_10017514Not Available2162Open in IMG/M
3300004793|Ga0007760_11388063Not Available769Open in IMG/M
3300005517|Ga0070374_10066561All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1877Open in IMG/M
3300005517|Ga0070374_10284822All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED46840Open in IMG/M
3300005525|Ga0068877_10701696All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage542Open in IMG/M
3300005527|Ga0068876_10185001Not Available1213Open in IMG/M
3300005581|Ga0049081_10054819Not Available1507Open in IMG/M
3300005662|Ga0078894_10019426All Organisms → cellular organisms → Bacteria5472Open in IMG/M
3300005662|Ga0078894_10055493All Organisms → cellular organisms → Bacteria → Proteobacteria3372Open in IMG/M
3300005662|Ga0078894_10057367Not Available3320Open in IMG/M
3300005662|Ga0078894_10141094Not Available2157Open in IMG/M
3300005662|Ga0078894_10401530Not Available1238Open in IMG/M
3300005662|Ga0078894_10470036Not Available1131Open in IMG/M
3300006639|Ga0079301_1083275Not Available995Open in IMG/M
3300008052|Ga0102893_1070514Not Available1049Open in IMG/M
3300008113|Ga0114346_1269390Not Available615Open in IMG/M
3300008116|Ga0114350_1019882Not Available5258Open in IMG/M
3300008120|Ga0114355_1023155All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4771Open in IMG/M
3300009068|Ga0114973_10348732Not Available782Open in IMG/M
3300009152|Ga0114980_10484864Not Available705Open in IMG/M
3300009155|Ga0114968_10091978Not Available1866Open in IMG/M
3300009158|Ga0114977_10029795All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3421Open in IMG/M
3300009158|Ga0114977_10269640Not Available977Open in IMG/M
3300009158|Ga0114977_10443742Not Available717Open in IMG/M
3300009159|Ga0114978_10030934All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3825Open in IMG/M
3300009159|Ga0114978_10051836All Organisms → cellular organisms → Bacteria → Proteobacteria2829Open in IMG/M
3300009159|Ga0114978_10088258All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium TMED1432064Open in IMG/M
3300009160|Ga0114981_10257965All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage949Open in IMG/M
3300009164|Ga0114975_10021396All Organisms → cellular organisms → Bacteria → Proteobacteria3921Open in IMG/M
3300009164|Ga0114975_10099395All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1683Open in IMG/M
3300009164|Ga0114975_10100096All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1676Open in IMG/M
3300009164|Ga0114975_10177653Not Available1209Open in IMG/M
3300009180|Ga0114979_10426617All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage773Open in IMG/M
3300009183|Ga0114974_10000626All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes29035Open in IMG/M
3300009419|Ga0114982_1124825Not Available794Open in IMG/M
3300010885|Ga0133913_10121269Not Available7007Open in IMG/M
3300010885|Ga0133913_11044322Not Available2109Open in IMG/M
3300012346|Ga0157141_1049582Not Available517Open in IMG/M
3300013004|Ga0164293_10054565All Organisms → cellular organisms → Bacteria → Proteobacteria3206Open in IMG/M
3300013004|Ga0164293_10212497Not Available1389Open in IMG/M
3300013005|Ga0164292_10026154All Organisms → cellular organisms → Bacteria4728Open in IMG/M
3300013006|Ga0164294_10098810Not Available2167Open in IMG/M
(restricted) 3300013126|Ga0172367_10003327Not Available21001Open in IMG/M
3300018868|Ga0187844_10108167All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae1248Open in IMG/M
3300020141|Ga0211732_1137099Not Available671Open in IMG/M
3300020141|Ga0211732_1292597All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium TMED1431196Open in IMG/M
3300020141|Ga0211732_1499556Not Available505Open in IMG/M
3300020151|Ga0211736_10232088All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4168Open in IMG/M
3300020151|Ga0211736_10322387All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium TMED1431260Open in IMG/M
3300020151|Ga0211736_10671560All Organisms → cellular organisms → Bacteria → Proteobacteria3119Open in IMG/M
3300020151|Ga0211736_10849569Not Available639Open in IMG/M
3300020159|Ga0211734_10653025Not Available627Open in IMG/M
3300020159|Ga0211734_11028088All Organisms → cellular organisms → Bacteria → Proteobacteria2370Open in IMG/M
3300020160|Ga0211733_10777732Not Available1529Open in IMG/M
3300020160|Ga0211733_10906868Not Available957Open in IMG/M
3300020161|Ga0211726_10008035Not Available527Open in IMG/M
3300020161|Ga0211726_10032658Not Available673Open in IMG/M
3300020161|Ga0211726_10340560All Organisms → Viruses → Predicted Viral1691Open in IMG/M
3300020162|Ga0211735_10935985Not Available735Open in IMG/M
3300020162|Ga0211735_11129316All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium TMED1431618Open in IMG/M
3300020162|Ga0211735_11138558Not Available922Open in IMG/M
3300020172|Ga0211729_10171849Not Available796Open in IMG/M
3300021438|Ga0213920_1050831All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage862Open in IMG/M
3300021961|Ga0222714_10179164All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1242Open in IMG/M
3300021962|Ga0222713_10358977Not Available909Open in IMG/M
3300021963|Ga0222712_10484090Not Available735Open in IMG/M
3300021964|Ga0222719_10341620Not Available953Open in IMG/M
3300022407|Ga0181351_1122122Not Available975Open in IMG/M
3300022594|Ga0236340_1002518All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes7616Open in IMG/M
3300024350|Ga0255167_1025033All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1136Open in IMG/M
3300027144|Ga0255102_1043643Not Available731Open in IMG/M
3300027146|Ga0255104_1040235Not Available807Open in IMG/M
(restricted) 3300027728|Ga0247836_1083586All Organisms → Viruses → Predicted Viral1616Open in IMG/M
3300027733|Ga0209297_1202530Not Available786Open in IMG/M
3300027733|Ga0209297_1317845Not Available575Open in IMG/M
3300027734|Ga0209087_1330087Not Available533Open in IMG/M
3300027759|Ga0209296_1001567All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes17354Open in IMG/M
3300027759|Ga0209296_1012594All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5012Open in IMG/M
3300027759|Ga0209296_1089548All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1495Open in IMG/M
3300027763|Ga0209088_10216342Not Available812Open in IMG/M
3300027782|Ga0209500_10025035All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3423Open in IMG/M
3300027793|Ga0209972_10040557All Organisms → cellular organisms → Bacteria → Proteobacteria2606Open in IMG/M
3300027798|Ga0209353_10066233Not Available1649Open in IMG/M
3300027805|Ga0209229_10194294Not Available910Open in IMG/M
3300027836|Ga0209230_10023797All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2990Open in IMG/M
3300027963|Ga0209400_1124071All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → Janthinobacterium agaricidamnosum → Janthinobacterium agaricidamnosum NBRC 102515 = DSM 96281163Open in IMG/M
3300027963|Ga0209400_1137270Not Available1083Open in IMG/M
3300027969|Ga0209191_1053608Not Available1835Open in IMG/M
3300027969|Ga0209191_1065217Not Available1625Open in IMG/M
(restricted) 3300027977|Ga0247834_1159079Not Available902Open in IMG/M
(restricted) 3300028114|Ga0247835_1012997Not Available5167Open in IMG/M
(restricted) 3300028581|Ga0247840_10084381All Organisms → Viruses → Predicted Viral2182Open in IMG/M
3300032050|Ga0315906_10362959Not Available1277Open in IMG/M
3300034020|Ga0335002_0474510Not Available675Open in IMG/M
3300034062|Ga0334995_0301302Not Available1050Open in IMG/M
3300034102|Ga0335029_0261263All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1113Open in IMG/M
3300034102|Ga0335029_0322794Not Available964Open in IMG/M
3300034106|Ga0335036_0553113All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage707Open in IMG/M
3300034108|Ga0335050_0118684Not Available1497Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake29.41%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater19.61%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake14.71%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater14.71%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water3.92%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton2.94%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater2.94%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment1.96%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface1.96%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater0.98%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater0.98%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic0.98%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater0.98%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater0.98%
FreshwaterEnvironmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater0.98%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.98%
Hydrocarbon Resource EnvironmentsEngineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments0.98%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2035265000Freshwater microbial communities from Swedish Lakes - surface of Lake ErkenEnvironmentalOpen in IMG/M
3300001605Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling BasinEngineeredOpen in IMG/M
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300003277Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300004793Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005517Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)EnvironmentalOpen in IMG/M
3300005525Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaGEnvironmentalOpen in IMG/M
3300005527Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaGEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300006639Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11EnvironmentalOpen in IMG/M
3300008052Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02EnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008116Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NAEnvironmentalOpen in IMG/M
3300008120Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NAEnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300009155Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaGEnvironmentalOpen in IMG/M
3300009158Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaGEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009160Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaGEnvironmentalOpen in IMG/M
3300009164Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaGEnvironmentalOpen in IMG/M
3300009180Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaGEnvironmentalOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300009419Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FTEnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300012346Freshwater microbial communities from Emily Creek, Ontario, Canada - S29EnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013005Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaGEnvironmentalOpen in IMG/M
3300013006Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaGEnvironmentalOpen in IMG/M
3300013126 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10mEnvironmentalOpen in IMG/M
3300018868Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_50EnvironmentalOpen in IMG/M
3300020141Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1EnvironmentalOpen in IMG/M
3300020151Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1EnvironmentalOpen in IMG/M
3300020159Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1EnvironmentalOpen in IMG/M
3300020160Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1EnvironmentalOpen in IMG/M
3300020161Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1EnvironmentalOpen in IMG/M
3300020162Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1EnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300021438Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17 MGEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300022594Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Summer S1EnvironmentalOpen in IMG/M
3300024350Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepA_8dEnvironmentalOpen in IMG/M
3300027144Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepA_0hEnvironmentalOpen in IMG/M
3300027146Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepC_0hEnvironmentalOpen in IMG/M
3300027728 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_14mEnvironmentalOpen in IMG/M
3300027733Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027734Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027759Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027763Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027782Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027793Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027798Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027805Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)EnvironmentalOpen in IMG/M
3300027836Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300027963Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027969Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027977 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_12mEnvironmentalOpen in IMG/M
3300028114 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_13.5mEnvironmentalOpen in IMG/M
3300028581 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_17mEnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300034020Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2015-rr0055EnvironmentalOpen in IMG/M
3300034062Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045EnvironmentalOpen in IMG/M
3300034102Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112EnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M
3300034108Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Jun2014-rr0157EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
ErSWdraft_38802402035265000FreshwaterMTVNQANKVNANADTFDFSAMSFTGNTVANDSRFALAA
Draft_1002977253300001605Hydrocarbon Resource EnvironmentsMGSTRQAIVVNEAKLVNANADTFDFSAMSFSGNTVGGKVALAA*
B570J40625_10039015433300002835FreshwaterMTLNQAKQVNAENADTFDFTAMSFTGNTVTGSSKVALAA*
JGI25908J49247_1001751443300003277Freshwater LakeMTVNQAKLVNANADTYDFSAMSFTGNTVRGAANESRFALAA*
Ga0007760_1138806313300004793Freshwater LakeMTVNQAKLVNANADTFDFSAMSFTGNTVRGAANESRFALAA*
Ga0070374_1006656123300005517Freshwater LakeMTVNQANKVKANADTFEFGAMSFTGNTVSGKSKFALAA*
Ga0070374_1028482223300005517Freshwater LakeMTVNQAKLVNANANTTEFSGFSFTGNTVRGAANEGRFALAA*
Ga0068877_1070169613300005525Freshwater LakeMTVNQANKVKANADTFEFGALNFTGNTVRGAANEGRFALAA*
Ga0068876_1018500133300005527Freshwater LakeMTVNQAKIVNANADTFDFSAMSFTGNTVSGKSKVALAA*
Ga0049081_1005481943300005581Freshwater LenticMTVNQANKVKANADTFDFSAMSFTGNTVRGAANESRF
Ga0078894_10019426103300005662Freshwater LakeMTVNQAFINAEENAFDFAAMSFTGNTVKGSKVAVAA*
Ga0078894_1005549383300005662Freshwater LakeMTVNQANKVKANADTFEFGAMSFTGNTVSGKSKVALAA*
Ga0078894_1005736713300005662Freshwater LakeMDVIQAKNVNANADTFDFSAMSFSGNTVRGEVALAA*
Ga0078894_1014109433300005662Freshwater LakeMTVNQANKVKANADTFEFGAMSFTGNTVSGTSRFALAA*
Ga0078894_1040153033300005662Freshwater LakeNVNATADTFDFSAMSFTGNTVRGAANESRFALAA*
Ga0078894_1047003613300005662Freshwater LakeMTVNQAKNVNANADTFDFSAMSFTGNSVSGKSKVALAA*
Ga0079301_108327523300006639Deep SubsurfaceMTVNQANKVKANADTFDFSAMSFTGNTVRGAANESRFALAA*
Ga0102893_107051413300008052EstuarineMTVNQAKLVNANADTFDFSAMSFTGNTVRGAANESR
Ga0114346_126939023300008113Freshwater, PlanktonMTVNQANKVKANADTFDFSAMSFTGNTVSGKSKVALAA*
Ga0114350_101988283300008116Freshwater, PlanktonMTVNQANKVKANADTFEFGAMSLTGNTVSGKSKVALAA*
Ga0114355_102315583300008120Freshwater, PlanktonMTVNQAKLVNAKADTFDFSAMSFTGNTVRGAANESRFALAA*
Ga0114973_1034873233300009068Freshwater LakeMTVNQAKLVNANADTFDFSAMSFTGNTVRGAANESRFAL
Ga0114980_1048486423300009152Freshwater LakeMTVNQANKVNAKADTFDFSAMSFTGNSVTGASKFALAA*
Ga0114968_1009197823300009155Freshwater LakeMTVNQAKLVNANADTFDFSAMSFTGNSVSGKSKVALAA*
Ga0114977_1002979523300009158Freshwater LakeMTANQANKVNANADTFEFSGFNFTGNTVRGAANEGRFALAA*
Ga0114977_1026964013300009158Freshwater LakeMTVNQAKIVNATADTFDFSAMSFTGNTVRGAANESRFALAA*
Ga0114977_1044374223300009158Freshwater LakeANKVNANADTFEFSGFNFTGNTVRGAANEGRFALAA*
Ga0114978_1003093413300009159Freshwater LakeMTANQANKVNANADTFEFSGFNFTGNTVRGAANEGR
Ga0114978_1005183663300009159Freshwater LakeMTVNQANKVKANADTFDFSAMSFTGNTVRGAANDSRFALAA*
Ga0114978_1008825833300009159Freshwater LakeMTVNQANQVNAKADTFDFSAMSFTGNSVTGASKVALAA*
Ga0114981_1025796513300009160Freshwater LakeNQAKLVNANADTFDFSAMSFTGNTVRGAANESRFALAA*
Ga0114975_1002139673300009164Freshwater LakeMTVNQAKLVNANADTFEFSGFNFTGNTVRGAANEGRFALAA*
Ga0114975_1009939543300009164Freshwater LakeMTVNQANKVKANADTFEFSAMSFTGNTVTGKSKVALAA*
Ga0114975_1010009633300009164Freshwater LakeMTVNQANKVKANADTNDFTAMSFTGNTVSGKSKVALAA*
Ga0114975_1017765313300009164Freshwater LakeMTVNQAKIVNANANTNDFTAMSFTGNTVRGAANESRFALAA*
Ga0114979_1042661723300009180Freshwater LakeIQAKIVNANADTFDFTAMSFTGNSVTGKSKTALAA*
Ga0114974_10000626313300009183Freshwater LakeMTVNQAKIVNANADTFDFTAMSFTGNTVRGAANESKFALAA*
Ga0114982_112482523300009419Deep SubsurfaceMTVNQAKLVNANADTFDFSAMSFTGNTVSGKSKVALAA*
Ga0133913_1012126993300010885Freshwater LakeMTVNQAKIVNANANTTDFTAMSFTGNSVTGKSKTALAA*
Ga0133913_1104432213300010885Freshwater LakeQANKVNANADTFEFSGFNFTGNTVRGAANEGRFALAA*
Ga0157141_104958213300012346FreshwaterMTVNQANKVNANADTFDFSAMSFSGNTVGGKVALAA*
Ga0164293_1005456543300013004FreshwaterMTVNQAKTVNAEKADTFDFTAMSFTGNTVSGKSKVALAA*
Ga0164293_1021249723300013004FreshwaterMDVIQAKTVNAEKADTFDFTAMSFTGNTVRGAANVSRFALAA*
Ga0164292_1002615443300013005FreshwaterMTLNQAKQVNAENADTFDFTAMSFTGNTVSGKSKVALAA*
Ga0164294_1009881043300013006FreshwaterMTVNQAKNVNATADTFDFSAMSFTGNTVRGAANESRFALAA*
(restricted) Ga0172367_1000332763300013126FreshwaterMTLNQANKVKANADTFDFTAMSFTGNTVANDSRFALAA*
Ga0187844_1010816733300018868FreshwaterMTVNQAKNVNATADTFDFSAMSFTGNTVRGAANESRFALAA
Ga0211732_113709923300020141FreshwaterMDVIQAKTVNAEKADTFDFTAMSFTGNTVRGAANVSRFALAA
Ga0211732_129259713300020141FreshwaterMTVNQANKVNAKADTFDFSAMSFTGNSVTGASKFALAA
Ga0211732_149955613300020141FreshwaterMTVNQAKLVNANADTFDFSAMSFTGNTVRGAANESRFALAA
Ga0211736_1023208823300020151FreshwaterMTLNQAKQVNAEKADTFDFTAMSFTGNTVTGSSKIAFAA
Ga0211736_1032238713300020151FreshwaterMTVNQANKVKANADTFEFGAMSFTGNTVRGAANEGRFALAA
Ga0211736_1067156013300020151FreshwaterMTVNQAKIVNANADTFDFSAMSFTGNSVTGASKVALAA
Ga0211736_1084956923300020151FreshwaterAMTVNQANKVKANADTFDFSAMSFTGNTVSGKSKVALAA
Ga0211734_1065302513300020159FreshwaterMTVNQAKIVNANADTTEFSGFSFTGNTVRGAANEGRFALAA
Ga0211734_1102808853300020159FreshwaterMTVNQANKVKANADTFDFSAMSFTGNTVSGKSKVALAA
Ga0211733_1077773223300020160FreshwaterMTVNQAKLVNANADTFDFSAMSFTGNTVRGAANDSRFALAA
Ga0211733_1090686823300020160FreshwaterMTVNQASKVKANADTFEFSAFGFTGNTVRGAANEGRFALAA
Ga0211726_1000803513300020161FreshwaterAKLVNANADTFDFSAMSFTGNTVRGAANESRFALAA
Ga0211726_1003265823300020161FreshwaterMDVIQAKKVKANADTFDFTAMSFTGNTVSGKSKVAVAA
Ga0211726_1034056013300020161FreshwaterMTVNQANQVNANADTFDFSAMSFTGNSVTGASKVALAA
Ga0211735_1093598513300020162FreshwaterNQAKLVNANADTFDFSAMSFTGNSVTGASKFALAA
Ga0211735_1112931613300020162FreshwaterMTVNQAKLVNANADTFDFSAMSFTGNSVTGASKFAL
Ga0211735_1113855813300020162FreshwaterREAMDVIQAKKVKANADTFDFTAMSFTGNTVSGTSKVAVAA
Ga0211729_1017184923300020172FreshwaterMDVIQAKKVKANADTFDFTAMSFTGNTVSGKSKVALAA
Ga0213920_105083113300021438FreshwaterMTVNQAKIVNANADTFDFGAMSFTGNSVSGKSKVALAA
Ga0222714_1017916413300021961Estuarine WaterMTVNQAKNVNANADTFDFSAMSFTGNSVSGKSKVALAA
Ga0222713_1035897723300021962Estuarine WaterMTVNQANKVKANADTFEFGAMSFTGNSVTGASRFALAA
Ga0222712_1048409013300021963Estuarine WaterMTVNQAKLVNANADTFDFSAMSFTGNTVSGKSKVALAA
Ga0222719_1034162023300021964Estuarine WaterTGQATDLISAKQVNAEDADTFEFGALSFTGNTVGGEVALAA
Ga0181351_112212233300022407Freshwater LakeMTVNQAKIVNANADTFDFSAMSFSGNTVGGKVALAA
Ga0236340_1002518103300022594FreshwaterMTVNQANNVNANADTFEFGAMSFTGNSVAGKSKVALAA
Ga0255167_102503333300024350FreshwaterMTLNQANKVIANDDSFDVGAISFTGNTVRGAANESRFALAA
Ga0255102_104364313300027144FreshwaterMTVNQAKLVNANADTFEFGAMSFTGNTVSGKSKFALAA
Ga0255104_104023523300027146FreshwaterNQANKVKANADTFDFSAMSFTGNTVRGAANESRFALAA
(restricted) Ga0247836_108358623300027728FreshwaterMTVNQANKVKANADTFEFGALNFTGNTVRGAANEGRFALAA
Ga0209297_120253013300027733Freshwater LakeQAKLVNANADTFDFSAMSFTGNTVRGAANESRFALAA
Ga0209297_131784513300027733Freshwater LakeMTANQANKVNANADTFEFSGFNFTGNTVRGAANEGRFALAA
Ga0209087_133008723300027734Freshwater LakeMTVNQANKVKANADTNDFTAMSFTGNTVSGKSKVALAA
Ga0209296_100156723300027759Freshwater LakeMTVNQAKIVNANADTFDFTAMSFTGNTVRGAANESKFALAA
Ga0209296_1012594103300027759Freshwater LakeMTVNQAKIVNANANTTDFTAMSFTGNSVTGKSKTALAA
Ga0209296_108954833300027759Freshwater LakeMTVNQANKVKANADTFEFSAMSFTGNTVTGKSKVALAA
Ga0209088_1021634223300027763Freshwater LakeMTVNQANKVKANADTFDFSAMSFTGNTVRGAANDSRFALAA
Ga0209500_1002503523300027782Freshwater LakeMTVNQANQVNAKADTFDFSAMSFTGNSVTGASKVALAA
Ga0209972_1004055753300027793Freshwater LakeMTVNQANKVKANADTFDFSAMSFTGNTVRGAANESRFALAA
Ga0209353_1006623353300027798Freshwater LakeAMTVNQANKVKANADTFEFGAMSFTGNTVSGKSKFALAA
Ga0209229_1019429423300027805Freshwater And SedimentMTVNQAKLVNANADTFEFSAMSFTGNTVSGKSKFALAA
Ga0209230_1002379763300027836Freshwater And SedimentMTVNQAKLVNANADTFDLSAMSFTGNTVRGAANESRFAL
Ga0209400_112407133300027963Freshwater LakeMTVNQAKLVNATADTFDFSAMSFTGNTVRGAANESRFALAA
Ga0209400_113727023300027963Freshwater LakeMTVNQAKLVNANADTFDFSAMSFTGNSVSGKSKVALAA
Ga0209191_105360813300027969Freshwater LakeNKVNANADTFEFSGFNFTGNTVRGAANEGRFALAA
Ga0209191_106521743300027969Freshwater LakeMTVNQAKLVNANADTFEFSGFNFTGNTVRGAANEGRFALAA
(restricted) Ga0247834_115907923300027977FreshwaterMTVNQAKQVNAEKADTFDFTAMSFTGNTVSGKSKVAVAA
(restricted) Ga0247835_101299713300028114FreshwaterAMTVNQANKVKANADTFEFGALNFTGNTVRGAANEGRFALAA
(restricted) Ga0247840_1008438113300028581FreshwaterMTVNQAKLVNANANTTEFSGFSFTGNTVRGAANEGRFALA
Ga0315906_1036295933300032050FreshwaterNQAKLVNANADTFDFSAMSFTGNTVSGKSKVALAA
Ga0335002_0474510_490_6153300034020FreshwaterMTVNQAKHVNANANTFDFSAMSFTGNTVRGAANESRFALAA
Ga0334995_0301302_50_1693300034062FreshwaterMTLNQAKQVNAENADTFDFTAMSFTGNTVSGKSKVALAA
Ga0335029_0261263_1004_11113300034102FreshwaterINVNAKADTFDFSAMSFTGNTVRGAANESRFALAA
Ga0335029_0322794_774_8933300034102FreshwaterMTVNQAKTVNAEKADTFDFTAMSFTGNTVTGSSKVAFAA
Ga0335036_0553113_585_7073300034106FreshwaterPLIKQINVNAKADTFDFSAMSFTGNTVRGAANESRFALAA
Ga0335050_0118684_1335_14603300034108FreshwaterMTVNQAKHVNATADTFDFSAMSFTGNTVRGAANESRFALAA


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