Metagenome Family F101061

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101061
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	64 residues
Representative Sequence	MTEPKVVNFEEALEDDDWGIIIGKDGTLKGMFIPEGQEEELVPEVIVKLCIDYFGIDPTEEVTLH
Number of Associated Samples	75
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	75.49 %
% of genes near scaffold ends (potentially truncated)	10.78 %
% of genes from short scaffolds (< 2000 bps)	55.88 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (42.157 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (16.667 % of family members)
Environment Ontology (ENVO)	Unclassified (49.020 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (87.255 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.13% β-sheet: 9.68% Coil/Unstructured: 74.19%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01171	ATP_bind_3	47.06
PF00574	CLP_protease	9.80
PF05050	Methyltransf_21	2.94
PF01176	eIF-1a	1.96
PF10902	WYL_2	1.96
PF08534	Redoxin	1.96
PF13793	Pribosyltran_N	0.98
PF00881	Nitroreductase	0.98
PF00149	Metallophos	0.98
PF02607	B12-binding_2	0.98
PF01242	PTPS	0.98
PF13353	Fer4_12	0.98
PF01844	HNH	0.98
PF09568	RE_MjaI	0.98
PF01883	FeS_assembly_P	0.98
PF05226	CHASE2	0.98
PF06945	DUF1289	0.98
PF05433	Rick_17kDa_Anti	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	47.06
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	47.06
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	47.06
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	47.06
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	47.06
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	47.06
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	19.61
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	19.61
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	9.80
COG0361	Translation initiation factor IF-1	Translation, ribosomal structure and biogenesis [J]	1.96
COG0720	6-pyruvoyl-tetrahydropterin synthase	Coenzyme transport and metabolism [H]	0.98
COG3313	Predicted Fe-S protein YdhL, DUF1289 family	General function prediction only [R]	0.98
COG4252	Extracytoplasmic sensor domain CHASE2 (specificity unknown)	Signal transduction mechanisms [T]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.84 %
Unclassified	root	N/A	42.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.16 %
Viruses	superkingdom	All Organisms → Viruses	32.35 %
cellular organisms	root	All Organisms → cellular organisms	25.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.16 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	29.41 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	20.59 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	4.90 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.16 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	29.41 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	11.76 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	4.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.90 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1.96 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.16 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	29.41 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	8.82 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	4.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.92 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	2.94 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	1.96 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.16 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	29.41 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	8.82 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	4.90 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	3.92 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2.94 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.96 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.16 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	29.41 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	6.86 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	4.90 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	3.92 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2.94 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	1.96 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.98 %
Saprospiria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria	0.98 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.16 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	29.41 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	6.86 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	4.90 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	3.92 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2.94 %
Nitrincola phage 1M3-16	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Nitrincola phage 1M3-16	1.96 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.98 %
Saprospirales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales	0.98 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.16 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	29.41 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	6.86 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	4.90 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	3.92 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2.94 %
Nitrincola phage 1M3-16	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Nitrincola phage 1M3-16	1.96 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.98 %
unclassified Saprospirales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales	0.98 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.16 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	29.41 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	6.86 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	4.90 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	3.92 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2.94 %
Nitrincola phage 1M3-16	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Nitrincola phage 1M3-16	1.96 %
Saprospirales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	0.98 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.98 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10017673	All Organisms → Viruses → Predicted Viral	4270	Open in IMG/M
3300000928\|OpTDRAFT_10079985	All Organisms → Viruses → Predicted Viral	2085	Open in IMG/M
3300001460\|JGI24003J15210_10013856	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	3191	Open in IMG/M
3300001778\|ACM18_1106328	Not Available	692	Open in IMG/M
3300003580\|JGI26260J51721_1006188	All Organisms → Viruses → Predicted Viral	3692	Open in IMG/M
3300005512\|Ga0074648_1021994	All Organisms → Viruses → Predicted Viral	3520	Open in IMG/M
3300005512\|Ga0074648_1022752	All Organisms → Viruses → Predicted Viral	3428	Open in IMG/M
3300005934\|Ga0066377_10000239	Not Available	12461	Open in IMG/M
3300006025\|Ga0075474_10075003	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1115	Open in IMG/M
3300006026\|Ga0075478_10012498	All Organisms → cellular organisms → Bacteria → Proteobacteria	2891	Open in IMG/M
3300006026\|Ga0075478_10036402	All Organisms → Viruses → Predicted Viral	1632	Open in IMG/M
3300006637\|Ga0075461_10115372	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	838	Open in IMG/M
3300006752\|Ga0098048_1001714	Not Available	9462	Open in IMG/M
3300006752\|Ga0098048_1009211	All Organisms → Viruses → Predicted Viral	3568	Open in IMG/M
3300006789\|Ga0098054_1007381	Not Available	4674	Open in IMG/M
3300006867\|Ga0075476_10014673	All Organisms → Viruses → Predicted Viral	3437	Open in IMG/M
3300007236\|Ga0075463_10090697	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	986	Open in IMG/M
3300007344\|Ga0070745_1012121	All Organisms → Viruses → Predicted Viral	4049	Open in IMG/M
3300007344\|Ga0070745_1289267	Not Available	586	Open in IMG/M
3300007345\|Ga0070752_1008519	Not Available	5669	Open in IMG/M
3300007539\|Ga0099849_1001320	Not Available	11625	Open in IMG/M
3300007539\|Ga0099849_1089639	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1235	Open in IMG/M
3300007623\|Ga0102948_1245910	Not Available	545	Open in IMG/M
3300007681\|Ga0102824_1148251	Not Available	617	Open in IMG/M
3300007725\|Ga0102951_1036973	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1477	Open in IMG/M
3300008012\|Ga0075480_10081567	All Organisms → Viruses → Predicted Viral	1839	Open in IMG/M
3300009000\|Ga0102960_1064793	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300009000\|Ga0102960_1093601	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1096	Open in IMG/M
3300009000\|Ga0102960_1180932	Not Available	755	Open in IMG/M
3300009001\|Ga0102963_1085436	All Organisms → Viruses → Predicted Viral	1291	Open in IMG/M
3300009001\|Ga0102963_1363283	All Organisms → Viruses	568	Open in IMG/M
3300009027\|Ga0102957_1106812	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Nitrincola phage 1M3-16	978	Open in IMG/M
3300009124\|Ga0118687_10245379	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300010149\|Ga0098049_1005069	Not Available	4721	Open in IMG/M
3300010296\|Ga0129348_1016059	Not Available	2725	Open in IMG/M
3300010299\|Ga0129342_1012844	All Organisms → Viruses → Predicted Viral	3504	Open in IMG/M
3300010318\|Ga0136656_1101051	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1011	Open in IMG/M
3300010318\|Ga0136656_1279944	Not Available	545	Open in IMG/M
3300012920\|Ga0160423_10059175	Not Available	2763	Open in IMG/M
3300012920\|Ga0160423_11075083	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	538	Open in IMG/M
3300012928\|Ga0163110_10375849	All Organisms → Viruses → Predicted Viral	1059	Open in IMG/M
3300012936\|Ga0163109_10042745	Not Available	3329	Open in IMG/M
3300013188\|Ga0116834_1039802	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	856	Open in IMG/M
3300013188\|Ga0116834_1080718	Not Available	654	Open in IMG/M
3300017742\|Ga0181399_1149590	Not Available	561	Open in IMG/M
3300017783\|Ga0181379_1216498	Not Available	668	Open in IMG/M
3300017818\|Ga0181565_10001348	Not Available	18814	Open in IMG/M
3300017818\|Ga0181565_10001601	Not Available	17262	Open in IMG/M
3300017818\|Ga0181565_10007105	Not Available	8563	Open in IMG/M
3300017818\|Ga0181565_10046826	All Organisms → Viruses → Predicted Viral	3134	Open in IMG/M
3300017818\|Ga0181565_10059609	Not Available	2744	Open in IMG/M
3300017818\|Ga0181565_10256434	All Organisms → Viruses → Predicted Viral	1185	Open in IMG/M
3300017949\|Ga0181584_10395670	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	866	Open in IMG/M
3300017949\|Ga0181584_10700536	Not Available	605	Open in IMG/M
3300017957\|Ga0181571_10288683	Not Available	1037	Open in IMG/M
3300017958\|Ga0181582_10335671	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	980	Open in IMG/M
3300017968\|Ga0181587_10334277	Not Available	1014	Open in IMG/M
3300017986\|Ga0181569_10313088	All Organisms → Viruses → Predicted Viral	1086	Open in IMG/M
3300018048\|Ga0181606_10445365	Not Available	685	Open in IMG/M
3300018416\|Ga0181553_10210122	Not Available	1121	Open in IMG/M
3300018424\|Ga0181591_10691467	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	719	Open in IMG/M
3300020266\|Ga0211519_1048605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	835	Open in IMG/M
3300020340\|Ga0211594_1130285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	526	Open in IMG/M
3300020341\|Ga0211592_1097318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	610	Open in IMG/M
3300020380\|Ga0211498_10359203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	547	Open in IMG/M
3300020442\|Ga0211559_10004851	Not Available	7330	Open in IMG/M
3300020442\|Ga0211559_10057606	Not Available	1901	Open in IMG/M
3300021185\|Ga0206682_10076291	All Organisms → Viruses → Predicted Viral	1728	Open in IMG/M
3300021356\|Ga0213858_10001522	Not Available	11094	Open in IMG/M
3300021364\|Ga0213859_10001514	Not Available	10327	Open in IMG/M
3300021364\|Ga0213859_10100356	Not Available	1372	Open in IMG/M
3300021368\|Ga0213860_10180650	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	930	Open in IMG/M
3300021368\|Ga0213860_10180709	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300021379\|Ga0213864_10115642	All Organisms → Viruses → Predicted Viral	1339	Open in IMG/M
3300021425\|Ga0213866_10088545	All Organisms → Viruses → Predicted Viral	1700	Open in IMG/M
3300021957\|Ga0222717_10048031	All Organisms → Viruses → Predicted Viral	2775	Open in IMG/M
3300021958\|Ga0222718_10021067	All Organisms → Viruses → Predicted Viral	4532	Open in IMG/M
3300021958\|Ga0222718_10043651	All Organisms → Viruses → Predicted Viral	2897	Open in IMG/M
3300021958\|Ga0222718_10090902	All Organisms → Viruses → Predicted Viral	1818	Open in IMG/M
3300021958\|Ga0222718_10442112	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	641	Open in IMG/M
3300021959\|Ga0222716_10610190	Not Available	594	Open in IMG/M
3300021960\|Ga0222715_10328474	Not Available	859	Open in IMG/M
3300021960\|Ga0222715_10347399	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Nitrincola phage 1M3-16	827	Open in IMG/M
3300021964\|Ga0222719_10023010	All Organisms → Viruses → Predicted Viral	4959	Open in IMG/M
3300021964\|Ga0222719_10037350	All Organisms → Viruses → Predicted Viral	3772	Open in IMG/M
3300022935\|Ga0255780_10252342	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	870	Open in IMG/M
3300023108\|Ga0255784_10252039	Not Available	902	Open in IMG/M
3300025070\|Ga0208667_1001139	Not Available	10160	Open in IMG/M
3300025070\|Ga0208667_1003003	Not Available	5265	Open in IMG/M
3300025084\|Ga0208298_1000586	Not Available	14998	Open in IMG/M
3300025120\|Ga0209535_1035021	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2318	Open in IMG/M
3300025483\|Ga0209557_1001434	Not Available	13182	Open in IMG/M
3300025610\|Ga0208149_1010949	All Organisms → Viruses → Predicted Viral	2763	Open in IMG/M
3300025610\|Ga0208149_1041699	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1215	Open in IMG/M
3300025653\|Ga0208428_1005270	All Organisms → Viruses → Predicted Viral	4849	Open in IMG/M
3300025674\|Ga0208162_1000832	Not Available	16938	Open in IMG/M
3300025828\|Ga0208547_1008993	All Organisms → Viruses → Predicted Viral	4580	Open in IMG/M
3300026085\|Ga0208880_1000070	Not Available	20185	Open in IMG/M
3300026187\|Ga0209929_1010123	All Organisms → Viruses → Predicted Viral	3080	Open in IMG/M
3300028008\|Ga0228674_1010344	All Organisms → Viruses → Predicted Viral	4307	Open in IMG/M
3300028131\|Ga0228642_1135065	Not Available	598	Open in IMG/M
3300031851\|Ga0315320_10571438	Not Available	748	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	88.24%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	10.78%
Sediment	Environmental → Aquatic → Sediment	0.98%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	29.41%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	21.57%
Oceanic	Environmental → Aquatic → Marine → Oceanic	17.65%
Unclassified	Environmental → Aquatic → Marine → Unclassified	15.69%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	10.78%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.96%
Strait	Environmental → Aquatic → Marine → Strait	1.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	29.41%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	16.67%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	15.69%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	13.73%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	8.82%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	3.92%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	1.96%
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	1.96%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	16.67%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	16.67%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	12.75%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	9.80%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	8.82%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	6.86%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	5.88%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	3.92%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	3.92%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.96%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.96%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	1.96%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	1.96%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	1.96%
Marine Plankton	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton	0.98%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.98%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.98%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.98%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000928	Marine plume microbial communities from the Columbia River - 25 PSU	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001778	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM18, ROCA_DNA027_0.2um_3g	Environmental	Open in IMG/M
3300003580	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI074_LV_120m_DNA	Environmental	Open in IMG/M
3300005512	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water	Environmental	Open in IMG/M
3300005934	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_SurfaceB_ad_5m_LV_B	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300007236	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007623	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_H2O_MG	Environmental	Open in IMG/M
3300007681	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.753	Environmental	Open in IMG/M
3300007725	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MG	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009027	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG	Environmental	Open in IMG/M
3300009124	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300010299	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA	Environmental	Open in IMG/M
3300010318	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300013188	Marine hypoxic microbial communities from the Gulf of Mexico, USA - 6m_Station1_GOM_Metagenome	Environmental	Open in IMG/M
3300017742	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21	Environmental	Open in IMG/M
3300017783	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020266	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX556082-ERR598951)	Environmental	Open in IMG/M
3300020340	Marine microbial communities from Tara Oceans - TARA_B100001121 (ERX555960-ERR599119)	Environmental	Open in IMG/M
3300020341	Marine microbial communities from Tara Oceans - TARA_B100001121 (ERX555908-ERR599066)	Environmental	Open in IMG/M
3300020380	Marine microbial communities from Tara Oceans - TARA_B000000565 (ERX555945-ERR599058)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300021185	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015	Environmental	Open in IMG/M
3300021356	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245	Environmental	Open in IMG/M
3300021364	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304	Environmental	Open in IMG/M
3300021368	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550	Environmental	Open in IMG/M
3300021379	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247	Environmental	Open in IMG/M
3300021425	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022935	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG	Environmental	Open in IMG/M
3300023108	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG	Environmental	Open in IMG/M
3300025070	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025084	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025483	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI074_LV_120m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025610	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025653	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025828	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300026085	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_SurfaceB_ad_5m_LV_B (SPAdes)	Environmental	Open in IMG/M
3300026187	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300028008	Seawater microbial communities from Monterey Bay, California, United States - 1D_r	Environmental	Open in IMG/M
3300028131	Seawater microbial communities from Monterey Bay, California, United States - 53D	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_100176733	3300000101	Marine	MSEQNVQYITFEEALDSDDWGLIIGKDGSLKGMFIPEGDEEEEIPESIIQICKRVYGIDPTEQVTIH*
OpTDRAFT_100799854	3300000928	Freshwater And Marine	MSKEPSVDFQDTLEEDDWGLIIGQDGLLKGMFIPEGCEEEQVPEIIVEICLKYFGVDPTEEVTYH*
JGI24003J15210_100138561	3300001460	Marine	MSEQNEQYITFEQTLDSDDWGLIIGKDGSLKGMFIPEGEEEEQVPESIVQICKRVFGIDPTEQVTIH*
ACM18_11063283	3300001778	Marine Plankton	MAVVSFEDSLEEDDWGLIIGSDGSLKGLYIPEGCEDAEVPDAIVLICEKFFGXXXXXXXXVH*
JGI26260J51721_10061884	3300003580	Marine	MNDSVDFEDVLEDDDWGLIIDNNGNLKGMFIPEGYDEEEVPTAIIEICIKYFGIDPTEEVTFH*
Ga0074648_10219948	3300005512	Saline Water And Sediment	MTEPKVVNFEEALEDDDWGIIIGKDGTLKGMFIPEGQEEELVPEVIVKLCIDYFGIDPTEEVTLH*
Ga0074648_10227528	3300005512	Saline Water And Sediment	MTEPRVVNFEDALTDDDWGIIIGKDGSLKGMFIPQGEEEDQVPAVIVKLCKDYFGIDPTEEVTLH*
Ga0066377_1000023914	3300005934	Marine	MAVVSFEDSLEEDDWGLIIGSDGSLKGLYIPEGCEDAEVPDAIVLICEKFFGIDPTEKVTVH*
Ga0075474_100750032	3300006025	Aqueous	MTTPKVVNFEEALEDDDWGIIIGKDGALKGMFIPEGQDEELVPDVIVKICIDYFGIDPTEEVTLH*
Ga0075478_100124988	3300006026	Aqueous	MTAPKVVNFEQALEDDDWGIIIGKDGTLKGMFIPEGQDEELVPDVIVKICIDYFGIDPTEEVTLH*
Ga0075478_100364026	3300006026	Aqueous	MTAPKVVNFEEALEDDDWGIIIGKDGTLKGMFIPEGQDEDLVPEVIVKLCIDYFGVDPTEEVTLH*
Ga0075461_101153723	3300006637	Aqueous	MTEPKVVNFEEALEDDDWGITIGKDGSLKGMFIPEGQDEELVPDVIVKICIDYFGIDPTDEVTLH*
Ga0098048_100171417	3300006752	Marine	MMNDKVKFEDTLEDDDWGLIIGKDGTLKGMFIPEDDDESNVPEAIIKICITYFGVDPTEEVTYH*
Ga0098048_10092117	3300006752	Marine	MDNNVNFEDVLEDDDWGLIIDNDGNLKGMFIPDGYDEEEVPAAIIEICIKYFGIDPTEEVTFH*
Ga0098054_10073815	3300006789	Marine	LQERSKMMNDKVKFEDTLEDDDWGLIIGKDGTLKGMFIPEDDDESNVPEAIIKICITYFGVDPTEEVTYH*
Ga0075476_100146732	3300006867	Aqueous	MTEPKVVNFEEALEDDDWGIIIGKDGTLKGMFIPEGQDEDLVPEVIVKLCIDYFGVDPTEEVTLH*
Ga0075463_100906972	3300007236	Aqueous	VNFEEALEDDDWGIIIGKDGTLKGMFIPEGQDEDLVPEVIVKLCIDYFGVDPTEEVTLH*
Ga0070745_10121218	3300007344	Aqueous	VNFEEALEDDDWGIIIGKDGALKGMFIPEGQDEELVPDVIVKICIDYFGIDPTEEVTLH*
Ga0070745_12892673	3300007344	Aqueous	VNFEQALEDDDWGIIIGKDGTLKGMFIPEGQDEDLVPEVIVKLCIDYFGVDPTEEVTLH*
Ga0070752_100851910	3300007345	Aqueous	VNFEEALEDDDWGIIIGKDGALKGMFIPEGQDEELVPEVIVKICIDYFGIDP
Ga0099849_100132017	3300007539	Aqueous	MAEPISFEDSLEEDDWGLIIGSDGSLKGLYIPEGHEDAEVPDAIVLICEKFFGIDPTEKVTLH*
Ga0099849_10896392	3300007539	Aqueous	VNFEEALEDDDWGIIIGKDGTLKGMFIPEGQHEELVPEVIVKLCIDYFGVDPTEEVTLH*
Ga0102948_12459102	3300007623	Water	MSEQMTFEDSLDEDDWGLIIGSDGSLKGLFIPEGHDDDEVPEAIIEICTKFFGVDPTEEVTLH*
Ga0102824_11482511	3300007681	Estuarine	SCCKKSNRGQIMSKEPSVDFQDTLEEDDWGLIIGQDGLLKGMFIPEGCEEEQVPEIIVEICLKYFGVDPTEEVTYH*
Ga0102951_10369733	3300007725	Water	MTTPKVVNFEEALEDDDWGIIIGKDGALKGMFIPEGQEEELVPEVIVKLCIDYFGIDPTKEVTLH*
Ga0075480_100815675	3300008012	Aqueous	VNFEQALEDDDWGIIIGKDGTLKGMFIPEGQDEELVPDVIVKICIDYFGIDPTEEVTLH*
Ga0102960_10647932	3300009000	Pond Water	MESKVVNFEDALEKDDWGIIIGKDGTLKGMFIPDGSDEEQVPEVIVKLCIDYFGIDPTKEETLH*
Ga0102960_10936012	3300009000	Pond Water	MTTPKVVNFEEALEDDDWGIIIGKDGALKGMFIPEGQDEELVPEVIVKICIDYFGIDPTEEVTLH*
Ga0102960_11809322	3300009000	Pond Water	MSEQMTFEDSLDEDDWGPIIGSDGSLKGLFIPEGHDDDEVPEAIIEICTKFFGVDPTEEVTLH*
Ga0102963_10854364	3300009001	Pond Water	VNFEEALADDDWGIIIGKDGSLKGMFIPEGQDEEQVPDVIVKLCIDYFGIDPTEEVTLH*
Ga0102963_13632832	3300009001	Pond Water	MTTPKVVNFEEALEDDDWGIIIGKDGTLKGMFIPEGQEEELVPEVIVKLCIDYFGIDPTEEVTLH*
Ga0102957_11068122	3300009027	Pond Water	VNFEEALEDDDWGIIIGKDGALKGMFIPEGQEEELVPEVIVKLCIDYFGIDPTKEVTLH*
Ga0118687_102453791	3300009124	Sediment	IQSMSEQMTFEDSLDEDDWGLIIGSDGSLKGLFIPEGHDDDEVPEAIIEICTKFFGVDPTEEVTLH*
Ga0098049_10050698	3300010149	Marine	MNDKVKFEDTLEDDDWGLIIGKDGTLKGMFIPEDDDESNVPEAIIKICITYFGVDPTEEVTYH*
Ga0129348_10160596	3300010296	Freshwater To Marine Saline Gradient	VNFEEALEDDDWGIIIGKDGALKGMFIPEGQDEELVPEVIVKICIDYFGIDPTEEVTLH*
Ga0129342_10128443	3300010299	Freshwater To Marine Saline Gradient	VNFEEALEDDDWGIIIGKDGTLKGMFIPEGQHEDLVPEVIVKLCIDYFGVDPTEEVTLH*
Ga0136656_11010513	3300010318	Freshwater To Marine Saline Gradient	VNFEEALEDDDWGIIIGKDGTLKGMFIPEGQEEELVPEVIVKLCIDYFGVDPTEEVTLH*
Ga0136656_12799441	3300010318	Freshwater To Marine Saline Gradient	MAEPISFEDSLEEDDWGLIIGSDGSLKGLYIPEGHEDAEVPDAIVLICEKFFGIDPTEK
Ga0160423_100591755	3300012920	Surface Seawater	MMGQQIVIKFEEALDEDDWGLIIGKDGTLKGMFVPEGQEDADVPHVIVKLCTDFFGIDPTEEVTLH*
Ga0160423_110750832	3300012920	Surface Seawater	MSEKIAFEDALEDDDWGIIISKKGKLKGMFIPEGDEEADVPEVIVKMCKEYFDVDVLEQETIH*
Ga0163110_103758494	3300012928	Surface Seawater	MSEKIAFEDALEDDDWGIIISKKGKLKGMFIPEGDEETDVPEVIVKMCKEYFDVDVLEQETIH*
Ga0163109_100427453	3300012936	Surface Seawater	MMSEQITFEDSLEDTDWGLIIGKDGTLKGMFIPEGEDEADVPQAIIDICVKFFGIDPTEEHTIH*
Ga0116834_10398022	3300013188	Marine	MSQPQVVKFEDTLEEDDWGLIIGNDGTLKGMFIPEGSDDAQVPEAIIEICKQFFGIDPTEEVTLH*
Ga0116834_10807181	3300013188	Marine	MSEVIQFEEALEDDDWGIIVGKDGTLKGMFIPQGQDEAEVPAVIIKLCKEIWGIDPTEEVTLH*
Ga0181399_11495902	3300017742	Seawater	MNDKVKFEDTLEDDDWGLIIGKDGTLKGMFIPEDDDESNVPEAIIKICITYFGVDPTEEVTYH
Ga0181379_12164982	3300017783	Seawater	MREQQTVTFEETLDSDDWGLIIGKDGSLKGMFIPEGEDEEEVPQTIIDICIKYFGVDPTEEHTIH
Ga0181565_1000134822	3300017818	Salt Marsh	MMAEPTVIKFEEALEDDDWGLIISKDGTLKGMFVPEGSEEEEVPEAIVQLCKNYFGTDPTAQVTLH
Ga0181565_1000160112	3300017818	Salt Marsh	MAEPISFEDSLEEDDWGLIIGSDGSLKGLYVPEGYEDADVPDSIVLICEKFFGIDPTEKVTLH
Ga0181565_100071055	3300017818	Salt Marsh	MTKELTTFENSLDEDDWGLIIGNDGSLKGLFIPEGSDDDEVPEAIIEICKKYFGIDPTEEVTFH
Ga0181565_100468267	3300017818	Salt Marsh	MTEPKVVSFEEALADDDWGIIIGKDGTLKGMFIPEGSDEEEVPEVIVKLCIQYFGIDPTEEVTLH
Ga0181565_100596096	3300017818	Salt Marsh	MERELTAFEESLEDDDWGLIIGNDGSLKGLYIPEGKDDEEVPETIIQICMDVFGIDPTEEVTLH
Ga0181565_102564341	3300017818	Salt Marsh	DALAEDDWGLIISKDGELKGMFIPEGKDDEDVPDAIVDICVTVFGIDPTEEVTLH
Ga0181584_103956702	3300017949	Salt Marsh	MTEPKVVNFEEALEDDDWGIIIGKDGALKGMFIPEGQDEELVPDVIVKICIDYFGIDPTEEVTLH
Ga0181584_107005361	3300017949	Salt Marsh	MSEQMTFEDSLDEGDWGLIIGSDGSLKGLFIPEGHDDDEVPEAIIEICTKFFGVDPTEEVTLH
Ga0181571_102886833	3300017957	Salt Marsh	MTQMKNPPTLINFADALAEDDWGLIISKDGELKGMFIPEGKDDEDVPDAIVDICVTVFGIDPTEEVTLH
Ga0181582_103356712	3300017958	Salt Marsh	MTEPKVVNFEDALADDDWGIIIGKDGSLKGMFIPEGQDEEQVPDVIVKLCIDYFGIDPTEEVTLH
Ga0181587_103342771	3300017968	Salt Marsh	MAEPTVIKFEEALEDDDWGLIISKDGTLKGMFVPEGSEEEEVPEAIVQLCKNYFGTDPTAQVTLH
Ga0181569_103130881	3300017986	Salt Marsh	MTEPKVVNFEEALADDDWGIIIGKDGTLKGMFIPEGSDEEEVPEVIVKLCIQYFGIDPTEEVTLH
Ga0181606_104453652	3300018048	Salt Marsh	MTKQVEFEEALDKDDWGLIISKDGSLKGMFIPEGSDDEEVPQVIVELCIQFFGIDPTKEVTMH
Ga0181553_102101222	3300018416	Salt Marsh	MAEPTVIRFEEALEDDDWGLIISKDGTLKGMFVPEGSEEEEVPEAIVQICKNYFGTDPTAQVTLH
Ga0181591_106914673	3300018424	Salt Marsh	SFEDSLEEDDWGLIIGSDGSLKGLYVPEGYEDADVPDSIVLICEKFFGIDPTEKVTLH
Ga0211519_10486054	3300020266	Marine	MTEPKVVKFEEALEDDDWGLIIGKDGSLKGMFIPEGKDEELVPEVIVKLCKEYWGIDPTEEVTLH
Ga0211594_11302851	3300020340	Marine	MSDKIQFEESLEDDDWGIIIGKDGSLKGMFIPEGDEETDVPPVIVKMCKDYFGIDVTEEVTIH
Ga0211592_10973182	3300020341	Marine	MSDKIQFEESLEDDDWGIIIGKDGSLKGMFIPEGDEETDVPPVIVKMCKDYFGIDVTEEVTIHXKE
Ga0211498_103592031	3300020380	Marine	LEDDDWGIIIGKDGTLKGMFIPDGKEEEEVPPVIVKMCKEYFGIDVTEEVTIH
Ga0211559_1000485117	3300020442	Marine	MSEKVSFEESLEDDDWGLIIGKDGTLKGMFIPEGEEEAEVPEAIRQICIKFFGVDPTEEVTIH
Ga0211559_100576064	3300020442	Marine	MAQMKNPPTLVSFADALAEDDWGLIIGKDGELKGMFIPEGKDDEDVPDAIVDICVTVFGIDPTEEVTLH
Ga0206682_100762913	3300021185	Seawater	MSKEPSVDFQDTLEEDDWGLIIGQDGLLKGMFIPEGCEEEQVPEIIVEICLKYFGVDPTEEVTYH
Ga0213858_1000152221	3300021356	Seawater	MKTTFEDALDEDDWGLIIGKDGSLKGMFIPEGEDDAEVPETIVEICKKFFGIDPTEEVTL
Ga0213859_100015148	3300021364	Seawater	MSEQITFEEALEDDDWGIIIGKDGKLKGMFIPEGEEEAEVPPVIIKMCKQYFGIDVTDEVTLH
Ga0213859_101003562	3300021364	Seawater	MSEKIAFEDALEDDDWGIIISKKGKLKGMFIPEGEEEADVPEVIIKMCKEYFDVDVLEQETIH
Ga0213860_101806502	3300021368	Seawater	MTAPKVVNFEEALEDDDWGIIIGKDGTLKGMFIPEGQDEELVPEVIVKLCIDYFGIDPTQEVTLH
Ga0213860_101807093	3300021368	Seawater	QALEEDDWGIIIGKDGALKGMFIPEGQDEELVPDVIVKICIDYFGIDPTEEVTLH
Ga0213864_101156423	3300021379	Seawater	MTTPKVVNFEEALEDDDWGIIIGKDGALKGMFIPEGQDEELVPEVIVKICIDYFGIDPTEEVTLH
Ga0213866_100885454	3300021425	Seawater	MTTPKVVNFEEALEDDDWGIIIGKDGALKGMFIPEGQDEELVPDVIVKICIDYFGIDPTEEVTLH
Ga0222717_100480314	3300021957	Estuarine Water	MTTPKVVNFEEALEDDDWGIIIGKDGALKGMFIPEGQDEELVPEVIVKLCIDYFGIDPTKEVTLH
Ga0222718_1002106710	3300021958	Estuarine Water	MTAPKVVNFEEALEDDDWGIIIGKNGTLKGMFIPEGQEEELVPEVIVKLCIDYFGIDPTEEVTLH
Ga0222718_100436513	3300021958	Estuarine Water	MTTPKVVNFEEALEDDDWGIIIGKDGTLKGMFIPEGQEEELVPEVIVKLCRDYFGIDPTEEVTLH
Ga0222718_100909023	3300021958	Estuarine Water	MTTPKVVNFEEALEDDDWGIIIGKDGALKGMFIPEGQEEELVPEVIVKLCIDYFGIDPTKEVTLH
Ga0222718_104421122	3300021958	Estuarine Water	MMESKVVNFEDALEKDDWGIIIGKDGTLKGMFIPDGSDEEQVPEVIVKLCIDYFGIDPTKEETLH
Ga0222716_106101902	3300021959	Estuarine Water	MSEQMTFEDSLDEDDWGLIIGSDGSLKGLFIPEGHDDDEVPEAIIEICTKFFGVDPTEEVTLH
Ga0222715_103284741	3300021960	Estuarine Water	MSEQMTFEESLDEGDWGLIIGSDGSLKGLFIPEGHDDDEVPEAIIEICTKFFGVDPTEEVTLH
Ga0222715_103473992	3300021960	Estuarine Water	MTTPKVVNFEEALEDDDWGIIIGKDGTLKGMFIPEGQEEELVPEVIVKLCIDYFGIDPTKEVTLH
Ga0222719_100230104	3300021964	Estuarine Water	MESKVVNFEDALEKDDWGIIIGKDGTLKGMFIPDGSDEEQVPEVIVKLCIDYFGIDPTKEETLH
Ga0222719_100373505	3300021964	Estuarine Water	MTEPKVVNFEEALADDDWGIIIGKDGSLKGMFIPEGQDEEQVPDVIVKLCIDYFGIDPTEEVTLH
Ga0255780_102523422	3300022935	Salt Marsh	MTEPKVVNFEDALADDDWGIIIGKDGSLKGMFIPEGQDEEQVPDVIVKLCIDYFGIDPTEEV
Ga0255784_102520393	3300023108	Salt Marsh	KRMTEPKVVSFEEALADDDWGIIIGKDGTLKGMFIPEGSDEEEVPEVIVKLCIQYFGIDPTEEVTLH
Ga0208667_100113916	3300025070	Marine	MMNDKVKFEDTLEDDDWGLIIGKDGTLKGMFIPEDDDESNVPEAIIKICITYFGVDPTEEVTYH
Ga0208667_10030034	3300025070	Marine	MDNNVNFEDVLEDDDWGLIIDNDGNLKGMFIPDGYDEEEVPAAIIEICIKYFGIDPTEEVTFH
Ga0208298_100058621	3300025084	Marine	LQERSKMMNDKVKFEDTLEDDDWGLIIGKDGTLKGMFIPEDDDESNVPEAIIKICITYFGVDPTEEVTYH
Ga0209535_10350211	3300025120	Marine	MSEQNEQYITFEQTLDSDDWGLIIGKDGSLKGMFIPEGEEEEQVPESIVQICKRVFGIDPTEQVTIH
Ga0209557_100143411	3300025483	Marine	MNDSVDFEDVLEDDDWGLIIDNNGNLKGMFIPEGYDEEEVPTAIIEICIKYFGIDPTEEVTFH
Ga0208149_10109496	3300025610	Aqueous	MTAPKVVNFEEALEDDDWGIIIGKDGTLKGMFIPEGQDEDLVPEVIVKLCIDYFGVDPTEEVTLH
Ga0208149_10416993	3300025610	Aqueous	MTAPKVVNFEQALEDDDWGIIIGKDGTLKGMFIPEGQDEELVPDVIVKICIDYFGIDPTEEVTLH
Ga0208428_10052702	3300025653	Aqueous	MTEPKVVNFEEALEDDDWGIIIGKDGTLKGMFIPEGQDEDLVPEVIVKLCIDYFGVDPTEEVTLH
Ga0208162_100083228	3300025674	Aqueous	MAEPISFEDSLEEDDWGLIIGSDGSLKGLYIPEGHEDAEVPDAIVLICEKFFGIDPTEKVTLH
Ga0208547_10089932	3300025828	Aqueous	MTEPKVVNFEEALEDDDWGIIIGKDGSLKGMFIPEGQDEELVPDVIVKICIDYFGIDPTDEVTLH
Ga0208880_100007030	3300026085	Marine	MAVVSFEDSLEEDDWGLIIGSDGSLKGLYIPEGCEDAEVPDAIVLICEKFFGIDPTEKVTVH
Ga0209929_10101234	3300026187	Pond Water	MTTPKVVNFEEALEDDDWGIIIGKDGTLKGMFIPEGQEEELVPEVIVKLCIDYFGIDPTEEVTLH
Ga0228674_101034417	3300028008	Seawater	MSKEPSVNFQDTLEEDDWGLIIGQDGLLKGMFIPEGCDDEQVPEIIVEICLKYFGVDPTEEVTIH
Ga0228642_11350652	3300028131	Seawater	MSKEPSVNFQDTLEEDDWGLIISQDGLLKGMFIPEGCDDEQVPEIIVEICLKYFGVDPTEEVTIH
Ga0315320_105714381	3300031851	Seawater	FIKLSQRKLEKMGNNVDFEDVLEDDDWGLIIDNDGNLKGMFIPEGYDEEEVPTAIIEICIKYFGIDPTEEVTFH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101061

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences