Basic Information | |
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Family ID | F101087 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 102 |
Average Sequence Length | 40 residues |
Representative Sequence | MIDNKEKHYLKACKSDFKCGNYFYGPKYQYCEQCRAKDMC |
Number of Associated Samples | 81 |
Number of Associated Scaffolds | 102 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 44.12 % |
% of genes near scaffold ends (potentially truncated) | 34.31 % |
% of genes from short scaffolds (< 2000 bps) | 44.12 % |
Associated GOLD sequencing projects | 73 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.19 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (56.863 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater (13.725 % of family members) |
Environment Ontology (ENVO) | Unclassified (66.667 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (92.157 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 7.35% β-sheet: 2.94% Coil/Unstructured: 89.71% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.19 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Marine Seawater Marine Surface Seawater Marine Microbial Mat Aqueous Seawater Marine Surface Water Estuary Water Marine Seawater Estuarine Salt Marsh Marine Estuarine Estuarine Water Pelagic Marine Seawater Pelagic Marine Marine Seawater Pond Water Water |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOSum2011_100182493 | 3300000115 | Marine | NKEKHYLKACKSDWNCGEYFYGPKYSMCKQCRDKEMC* |
DelMOSum2011_101118062 | 3300000115 | Marine | MIDNKEKHYLKACQSDMKCGNYFYHTKYRYCEQCRAKDYC* |
DelMOSpr2010_100040041 | 3300000116 | Marine | DNKEKHYLKACKSDWNCGEYFYGPKYSMCKQCRDKEMC* |
DelMOSpr2010_100073745 | 3300000116 | Marine | MIDNKEKHYLKACKSDWNCGEYFYGPKYSMCKQCRDKEMC* |
DelMOSpr2010_100114514 | 3300000116 | Marine | MIDNKDTAILKPCESDSKCGNYFYHTKYRYCEQCRAKDMC* |
DelMOSpr2010_100898182 | 3300000116 | Marine | MMDNKDTDILKPCESDFKCGNYFYHTKYRYCEQCRAKDVC* |
DelMOWin2010_101323091 | 3300000117 | Marine | KDTDILKPCESDFKCGNYFYHTKYRYCEQCRAKDVC* |
DelMOWin2010_102149762 | 3300000117 | Marine | MINTLSNKQDDILKACQSDFKCGNYFYHTKYRYCEQCRAKDYC* |
JGI20151J14362_100237262 | 3300001346 | Pelagic Marine | MIDNKEKHYLKACKSDWNCGEYFYGPKYSMCKQCRNKEMC* |
JGI20158J14315_100118253 | 3300001355 | Pelagic Marine | MIDNKEKHYLKSCKSDWNCGEYFYGPKYRYCKQCRDKEMC* |
GOS2250_10291403 | 3300001957 | Marine | MIDNKDKDILKPCESDFKCGNYFYHTKYRYCEQCRVKDMC* |
GOS2243_10719094 | 3300001965 | Marine | MIDNKEKNVLKACQSDFNCGNYFYHTKYRYCEICRAKDMC* |
Ga0073579_11743024 | 3300005239 | Marine | MIDNKQKDILQACQSDMKCGNYFYHTKYRYCEQCRAKDYC* |
Ga0101444_1178914 | 3300006620 | Marine Surface Water | RIVAMIDNKQKDILKACKSEIKCGNYFYSTEYRYCEQCRSREMC* |
Ga0098048_100107115 | 3300006752 | Marine | MIDNKDREVLKPCKSDFKCGNYFYGPKYQYCEICRAKDMC* |
Ga0098048_10095293 | 3300006752 | Marine | MIDNKEKQYLKACKSDFKCGNYFYGPKYQYCEICRAKDMC* |
Ga0098048_10103932 | 3300006752 | Marine | MIDNKEKHYLKACKSDFKCGNYFYGPKYQYCEQCRAKDMC* |
Ga0098055_100035931 | 3300006793 | Marine | MGRGRMIDNKDREVLKPCKSDFKCGNYFYGPKYQYCEICRAKDMC* |
Ga0098055_10325872 | 3300006793 | Marine | MIDNKEKQYLKACKSDFKCGNYFYGPKYQYCEQCRAKDMC* |
Ga0075476_102656071 | 3300006867 | Aqueous | RTVVEMIDNKHSDILKPCESDLKCGNYFYHTKYRYCEQCRAKDYC* |
Ga0098045_10528703 | 3300006922 | Marine | VNNIDNKEKNYLKSCKSDFKCGNYFYHSTFRYCEQCRAKDMC* |
Ga0098050_11387841 | 3300006925 | Marine | RMIDNKDREVLKPCKSDFKCGNYFYGPKYQYCEICRAKDMC* |
Ga0075460_100111453 | 3300007234 | Aqueous | MIDNKDTDILKPCESDFKCGNYFYHTKYRYCEQCRTKDYC* |
Ga0099849_10124422 | 3300007539 | Aqueous | MIDNKDTDILKPCESDFKCGNYFYHTKYKYCEQCRAKDMC* |
Ga0102948_10345332 | 3300007623 | Water | MIDNKEKHYLKACKSDFKCGNYFYGPKYQFCEKCRAKEMC* |
Ga0070751_10093603 | 3300007640 | Aqueous | MTDNKDTDILKPCESDFKCGNYFYHTKYRYCEQCRAKDVC* |
Ga0105746_13131742 | 3300007973 | Estuary Water | MGRGIMIDNKEKHYLKACKSDFKCGNYFYGPKYQYCEQCRAKDMC* |
Ga0105748_101290981 | 3300007992 | Estuary Water | MIDNKEKHYLKACKSDFKCGNYFYGPKYQYCEICRAK |
Ga0102960_10395891 | 3300009000 | Pond Water | MVDNKQKDYLKACKSDFKCGNYFYGPDYRYCEQCRTKDMC* |
Ga0102963_10218151 | 3300009001 | Pond Water | NKQKDYLKACKSDFKCGNYFYGPDYRYCEQCRTKDMC* |
Ga0102957_10455912 | 3300009027 | Pond Water | MVDNKEKHYLKACKSDWNCGEYFYGPQYNMCKQCRTKEMC* |
Ga0102854_10154752 | 3300009058 | Estuarine | MIDNKEKHYLKACKSDWNCGEYFYGPQYKYCKKCRAKEMC* |
Ga0115552_14178642 | 3300009077 | Pelagic Marine | AMVDNKEKHYLKACKSDWNCGEYFYGPQYSMCKQCRDKEMC* |
Ga0115554_12545181 | 3300009472 | Pelagic Marine | IMIDNKEKHYLKACKSDWNCGEYFYGPKYSMCKQCRDKEMC* |
Ga0115568_101164411 | 3300009498 | Pelagic Marine | IVAMVDNKEKHYLKACKSDWNCGEYFYGPQYSMCKQCRDKEMC* |
Ga0115011_100060203 | 3300009593 | Marine | MIDNKDTDILKPCESEIKCGNYFYSPIYRYCEQCRVKDMC* |
Ga0163110_107989192 | 3300012928 | Surface Seawater | MGRRRMIDNKEKKFLKACQSDFACGNYFYHTKYRYCEICRTKDWC* |
Ga0163179_100400573 | 3300012953 | Seawater | MISTLSNKQDDILKSCESEFKCGNYFYHPKYRYCELCRAKDWC* |
Ga0163111_100553812 | 3300012954 | Surface Seawater | MIDNKDKDILKPCESDFKCGNYFYHSKYRYCEQCRAKDMC* |
Ga0181391_10003393 | 3300017713 | Seawater | MEEAVVLDNKEKHYLKACKSDWDCGEYFYGPKYQYCRKCRDKDMC |
Ga0181391_10084703 | 3300017713 | Seawater | MIDNKEKHYLKACKSDFKCGNYFYGPKYQYCEKCRAKDMC |
Ga0181412_10016532 | 3300017714 | Seawater | MIDNKEKHYLKACKSDWNCGEYFYGPQYSMCKQCRDKEMC |
Ga0181399_11462251 | 3300017742 | Seawater | XMGRRVMIDNKDKEVLKPCKSDFKCGNYFYGPKYQYCEKCRAKDMC |
Ga0181389_10016982 | 3300017746 | Seawater | MGRGRMIDNKEKHYLKSCKSDWNCGEYFYGPQYSMCKKCRDKEMC |
Ga0181400_10545011 | 3300017752 | Seawater | KEKHYLKACKSDFKCGNYFYGPEYRYCKQCRAKDMC |
Ga0181407_11438492 | 3300017753 | Seawater | MIDNKEKSYLKSCESDWDCGNYFYGPKYKYCEQCRAKDMC |
Ga0181411_10020051 | 3300017755 | Seawater | IDNKEKHYLKACKSDWNCGEYFYGPQYSMCKQCRDKEMC |
Ga0181420_10055302 | 3300017757 | Seawater | MLDNKEKHYLKACKSDWNCGEYFYGPQYSMCKQCRDKEMC |
Ga0181422_12016091 | 3300017762 | Seawater | DNKEKHYLKACKSDWDCGEYFYGPKYQYCRKCRDKDMC |
Ga0187217_10045641 | 3300017770 | Seawater | MDIKMIDNKEKHYLKACKSDFKCGNYFYGPKYQYCEKCRAKDMC |
Ga0181425_12737541 | 3300017771 | Seawater | DKEVLKPCKSDFKCGNYFYGPKYKYCEQCRAKDMC |
Ga0181394_10343083 | 3300017776 | Seawater | DNKEKHYLKACKSDWNCGEYFYGPQYSMCKQCRDKEMC |
Ga0181394_10949861 | 3300017776 | Seawater | DKEVLKPCKSDFKCGNYFYGPEYRYCKQCRAKDMC |
Ga0181580_100072457 | 3300017956 | Salt Marsh | MIDNKYTDILKPCESDFKCGNYFYHTKYRYCEQCRAKDVC |
Ga0181581_100027645 | 3300017962 | Salt Marsh | MIDNKYTDILKPCESDFKCGNYFYHTKYRYCEQCRAKDIC |
Ga0181590_100661172 | 3300017967 | Salt Marsh | MMSNKDTDILKPCESDFKCGNYFYHTKYRYCEQCRTKDYC |
Ga0181590_109876192 | 3300017967 | Salt Marsh | MIDNKDTDILKPCESDFKCGNYFYHTKYRYCEQCRAKDMC |
Ga0181564_105642952 | 3300018876 | Salt Marsh | MIDNKDTDILKPCESDFKCGNYFYHTKYRYCEQCRTKDYC |
Ga0206124_100755701 | 3300020175 | Seawater | MVDNKEKHYLKACKSDWNCGEYFYGPKYRYCKQCRDKEMC |
Ga0211654_10613912 | 3300020247 | Marine | MIDNKEKTYLKSCKSDWDCGNYFYGPKYRYCKQCREKDMC |
Ga0211605_10397841 | 3300020339 | Marine | MIATNKNTDILKKCESDFNCGNYFYHTKYRYCEQC |
Ga0211594_10697762 | 3300020340 | Marine | MIATNKNTDILKKCESDFNCGNYFYHTKYRYCEQCRAKDWC |
Ga0211652_101226702 | 3300020379 | Marine | IMIDNKEKHYLKACKSDFKCGNYFYGPKYQYCEQCRAKDMC |
Ga0211705_100288603 | 3300020395 | Marine | MLNSTLSNKQDDILKPCESEFKCGNYFYHSKYRYCEQCRAKDWC |
Ga0211644_100317391 | 3300020416 | Marine | MIDNKDSDILKACESDFKCGNYFYHSKYRYCEQCRAK |
Ga0211581_103424912 | 3300020429 | Marine | MGRRMIDNKDSDILKACESDFKCGNYFYHSKYRYCEQC |
Ga0211708_100124912 | 3300020436 | Marine | MITTNKSTDILKKCESDFNCGNYFYHTKYRYCEQCRAKDWC |
Ga0211576_100006263 | 3300020438 | Marine | MIDNKDKEVLKPCKSDFKCGNYFYGPKYKYCEQCRAKDMC |
Ga0211576_100064144 | 3300020438 | Marine | MIDNKEKHYLKACKSDWNCGEYFYGPQYKYCKKCRAKEMC |
Ga0211576_100179553 | 3300020438 | Marine | MIDNKDKEVLKPCKSDFKCGNYFYGPEYRYCKQCRAKDMC |
Ga0211558_104027582 | 3300020439 | Marine | MGRRRMIDNKEKKFLKACQSDLACGNYFYHTKYRYCEVCRTKDWC |
Ga0211643_100153153 | 3300020457 | Marine | MIDNKDSDILKACESDFKCGNYFYHSKYRYCEQCRAKDMC |
Ga0213858_100390002 | 3300021356 | Seawater | MIDNKDSDILKACESDFACGNYFYHTKYRYCEQCRVKDMC |
Ga0222718_100006795 | 3300021958 | Estuarine Water | MIDNKQKDILQACQSDMKCGNYFYHTKYRYCEQCRAKDYC |
Ga0222718_100024182 | 3300021958 | Estuarine Water | MVDNKEKHYLKACKSDWNCGEYFYGPQYNMCKQCRTKEMC |
Ga0222718_100222113 | 3300021958 | Estuarine Water | MIDNKEKHYLKACKSDFKCGNYFYGPKYQFCEKCRAKEMC |
Ga0222716_106268723 | 3300021959 | Estuarine Water | MVDNKQKDYLKACKSDFKCGNYFYGPDYRYCEQCRAKD |
Ga0222719_100123573 | 3300021964 | Estuarine Water | MIDNKEKHYLKACKSDWNCGEYFYGPKYSMCKQCRAKDMC |
Ga0196899_10038382 | 3300022187 | Aqueous | MMDNKDTDILKPCESDFKCGNYFYHTKYRYCEQCRAKDVC |
Ga0196899_10241692 | 3300022187 | Aqueous | MIDNKDTAILKPCESDSKCGNYFYHTKYRYCEQCRAKDMC |
Ga0244775_106158601 | 3300024346 | Estuarine | GRGIMIDNKEKHYLKSCKSDWNCGEYFYGPQYSMCKKCRAKEMC |
Ga0208791_10524371 | 3300025083 | Marine | IDNKDREVLKPCKSDFKCGNYFYGPKYQYCEICRAKDMC |
Ga0208298_10002741 | 3300025084 | Marine | MIDNKEKQYLKACKSDFKCGNYFYGPKYQYCEICRAKDMC |
Ga0208298_10035473 | 3300025084 | Marine | MGRGRMIDNKDREVLKPCKSDFKCGNYFYGPKYQYCEICRAKDMC |
Ga0208298_10694732 | 3300025084 | Marine | MIDNKEKHYLKACKSDFKCGNYFYGPKYQYCEQCRAKDMC |
Ga0208793_10245093 | 3300025108 | Marine | MIDNKEKQYLKACKSDFKCGNYFYGPKYQYCEQCRAKDMC |
Ga0208162_10462722 | 3300025674 | Aqueous | MIDNKDTDILKPCESDFKCGNYFYHTKYKYCEQCRAKDMC |
Ga0209305_10005448 | 3300025712 | Pelagic Marine | MIDNKEKHYLKACKSDWNCGEYFYGPKYSMCKQCRDKEMC |
Ga0208547_10017433 | 3300025828 | Aqueous | MTDNKDTDILKPCESDFKCGNYFYHTKYRYCEQCRAKDVC |
Ga0208547_11502191 | 3300025828 | Aqueous | RTVVEMIDNKHSDILKPCESDLKCGNYFYHTKYRYCEQCRAKDYC |
Ga0208644_10515823 | 3300025889 | Aqueous | IDNKDTDILKPCESDFKCGNYFYHTKYRYCEQCRTKDYC |
Ga0209631_100213861 | 3300025890 | Pelagic Marine | DNKEKHYLKACKSDWNCGEYFYGPKYSMCKQCRNKEMC |
Ga0209631_100744303 | 3300025890 | Pelagic Marine | DNKEKHYLKACKSDWNCGEYFYGPKYSMCKQCRDKEMC |
Ga0209929_10088243 | 3300026187 | Pond Water | MVDNKQKDYLKACKSDFKCGNYFYGPDYRYCEQCRAKDMC |
Ga0209929_10251313 | 3300026187 | Pond Water | NKQKDYLKACKSDFKCGNYFYGPDYRYCEQCRTKDMC |
Ga0247588_11300531 | 3300026465 | Seawater | KEKHYLKACKSDWNCGEYFYGPQYSMCKQCRDKEMC |
Ga0208671_100825792 | 3300027757 | Estuarine | IVAMVDNKEKHYLKACKSDFKCGNYFYGPKYQYCEQCRAKDMC |
Ga0209404_100046123 | 3300027906 | Marine | MIDNKDTDILKPCESEIKCGNYFYSPIYRYCEQCRVKDMC |
Ga0233450_101233741 | 3300028115 | Salt Marsh | MIDNKDSNILKACQSDFSCGNYFYHTKYRYCEQCRAKDY |
Ga0257114_11530552 | 3300028196 | Marine | MVDNKEKHYLKACKSDWNCGEYFYGPQYSMCKKCRDKEMC |
Ga0315330_100241132 | 3300032047 | Seawater | MIATNESTDILKKCESDFACGNYFYHTKYRYCEQCRSKDWC |
Ga0316202_100367473 | 3300032277 | Microbial Mat | IMIDNKEKHYLKACKSDWNCGEYFYGPKYSMCKQCRDKEMC |
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