Metagenome / Metatranscriptome Family F101234

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101234
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	158 residues
Representative Sequence	MHSQDDEWSDNLDMTVVVALVLSAVLGGGQAKTHGKESVRIYVFATEVPGGSPPGDALQGRLAAVRELRDALRRKAGLSVVDDRAQADVTVEVTDREQQNAGEGGFGGVKLTRFVNTIIRVRVTFGEHQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPS
Number of Associated Samples	89
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	50.98 %
% of genes near scaffold ends (potentially truncated)	44.12 %
% of genes from short scaffolds (< 2000 bps)	78.43 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.196 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (12.745 % of family members)
Environment Ontology (ENVO)	Unclassified (42.157 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.706 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.04% β-sheet: 25.26% Coil/Unstructured: 56.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF13302	Acetyltransf_3	14.71
PF13360	PQQ_2	12.75
PF04820	Trp_halogenase	9.80
PF05114	DUF692	2.94
PF14534	DUF4440	1.96
PF12704	MacB_PCD	1.96
PF03928	HbpS-like	0.98
PF07583	PSCyt2	0.98
PF07589	PEP-CTERM	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG3220	Uncharacterized conserved protein, UPF0276 family	Function unknown [S]	2.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.20 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.20 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.20 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	39.22 %
Unclassified	root	N/A	9.80 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	7.84 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.92 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	31.37 %
Unclassified	root	N/A	9.80 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	7.84 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.92 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.37 %
Unclassified	root	N/A	9.80 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	7.84 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.92 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.37 %
Unclassified	root	N/A	9.80 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	4.90 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	2.94 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	2.94 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.37 %
Unclassified	root	N/A	9.80 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	4.90 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2.94 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.96 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.37 %
Unclassified	root	N/A	9.80 %
Gemmata	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata	4.90 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	2.94 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.96 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.37 %
Unclassified	root	N/A	9.80 %
Saccharopolyspora rectivirgula	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora rectivirgula	2.94 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.96 %
unclassified Gemmata	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata → unclassified Gemmata	0.98 %
Gemmata massiliana	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata → Gemmata massiliana	0.98 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.37 %
Unclassified	root	N/A	9.80 %
Saccharopolyspora rectivirgula	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora rectivirgula	2.94 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.96 %
Gemmata sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata → unclassified Gemmata → Gemmata sp.	0.98 %
Gemmata massiliana	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata → Gemmata massiliana	0.98 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004479\|Ga0062595_101401861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300005093\|Ga0062594_101665662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora rectivirgula	664	Open in IMG/M
3300005293\|Ga0065715_10247598	All Organisms → cellular organisms → Bacteria → Acidobacteria	1178	Open in IMG/M
3300005295\|Ga0065707_10345172	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300005328\|Ga0070676_10595949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora rectivirgula	796	Open in IMG/M
3300005330\|Ga0070690_100732515	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300005332\|Ga0066388_100093414	All Organisms → cellular organisms → Bacteria	3441	Open in IMG/M
3300005332\|Ga0066388_102631967	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300005343\|Ga0070687_100813240	Not Available	663	Open in IMG/M
3300005353\|Ga0070669_100047064	All Organisms → cellular organisms → Bacteria	3146	Open in IMG/M
3300005365\|Ga0070688_100141253	All Organisms → cellular organisms → Bacteria	1636	Open in IMG/M
3300005366\|Ga0070659_100371994	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300005445\|Ga0070708_100757712	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	913	Open in IMG/M
3300005466\|Ga0070685_11204541	Not Available	576	Open in IMG/M
3300005526\|Ga0073909_10301375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300005543\|Ga0070672_100627450	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata → unclassified Gemmata → Gemmata sp.	938	Open in IMG/M
3300005577\|Ga0068857_100870783	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300005617\|Ga0068859_100196464	All Organisms → cellular organisms → Bacteria	2102	Open in IMG/M
3300005713\|Ga0066905_100249344	All Organisms → cellular organisms → Bacteria → Acidobacteria	1363	Open in IMG/M
3300005713\|Ga0066905_100866725	Not Available	788	Open in IMG/M
3300005718\|Ga0068866_10333938	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300005764\|Ga0066903_100620457	All Organisms → cellular organisms → Bacteria	1880	Open in IMG/M
3300005841\|Ga0068863_100387933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1364	Open in IMG/M
3300005841\|Ga0068863_102089173	Not Available	576	Open in IMG/M
3300005844\|Ga0068862_100889888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	875	Open in IMG/M
3300005937\|Ga0081455_10022341	All Organisms → cellular organisms → Bacteria	5915	Open in IMG/M
3300006358\|Ga0068871_102042665	Not Available	546	Open in IMG/M
3300006573\|Ga0074055_11042072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	962	Open in IMG/M
3300006575\|Ga0074053_11108894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300006578\|Ga0074059_10011393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	908	Open in IMG/M
3300006844\|Ga0075428_100172537	All Organisms → cellular organisms → Bacteria	2343	Open in IMG/M
3300006852\|Ga0075433_10038356	All Organisms → cellular organisms → Bacteria	4137	Open in IMG/M
3300006871\|Ga0075434_100053092	All Organisms → cellular organisms → Bacteria	4027	Open in IMG/M
3300006871\|Ga0075434_102168419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300006881\|Ga0068865_101920623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora rectivirgula	536	Open in IMG/M
3300006969\|Ga0075419_10400762	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300007076\|Ga0075435_100113436	All Organisms → cellular organisms → Bacteria	2256	Open in IMG/M
3300007076\|Ga0075435_101099942	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300009012\|Ga0066710_104621312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300009098\|Ga0105245_10691084	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300009147\|Ga0114129_10005510	All Organisms → cellular organisms → Bacteria	17899	Open in IMG/M
3300009147\|Ga0114129_12623174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300009156\|Ga0111538_10127292	All Organisms → cellular organisms → Bacteria	3235	Open in IMG/M
3300009162\|Ga0075423_10119189	All Organisms → cellular organisms → Bacteria	2767	Open in IMG/M
3300009162\|Ga0075423_10974424	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300009176\|Ga0105242_10365775	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300009177\|Ga0105248_10631991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1208	Open in IMG/M
3300010359\|Ga0126376_10299852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1397	Open in IMG/M
3300010360\|Ga0126372_10253093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1513	Open in IMG/M
3300010360\|Ga0126372_12261719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300010362\|Ga0126377_10363331	All Organisms → cellular organisms → Bacteria → Acidobacteria	1448	Open in IMG/M
3300010400\|Ga0134122_11810176	Not Available	643	Open in IMG/M
3300010403\|Ga0134123_11252276	Not Available	775	Open in IMG/M
3300011423\|Ga0137436_1112523	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300012212\|Ga0150985_113593003	All Organisms → cellular organisms → Bacteria	2184	Open in IMG/M
3300012356\|Ga0137371_10250135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1384	Open in IMG/M
3300012360\|Ga0137375_11321324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300012469\|Ga0150984_105357834	Not Available	1440	Open in IMG/M
3300012948\|Ga0126375_10492446	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300012948\|Ga0126375_11606938	Not Available	560	Open in IMG/M
3300012957\|Ga0164303_10203126	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata	1099	Open in IMG/M
3300012989\|Ga0164305_10192865	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata → Gemmata massiliana	1425	Open in IMG/M
3300013297\|Ga0157378_10273873	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata	1624	Open in IMG/M
3300013306\|Ga0163162_10050894	All Organisms → cellular organisms → Bacteria	4154	Open in IMG/M
3300014326\|Ga0157380_12410930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300014745\|Ga0157377_11140337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300015371\|Ga0132258_10300666	All Organisms → cellular organisms → Bacteria	3946	Open in IMG/M
3300015371\|Ga0132258_12317533	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata	1346	Open in IMG/M
3300015372\|Ga0132256_100336011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1602	Open in IMG/M
3300015373\|Ga0132257_100454181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1565	Open in IMG/M
3300015373\|Ga0132257_100833083	All Organisms → cellular organisms → Bacteria → Acidobacteria	1153	Open in IMG/M
3300015373\|Ga0132257_101715686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300015373\|Ga0132257_103536332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300015374\|Ga0132255_101896915	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300017792\|Ga0163161_11641120	Not Available	568	Open in IMG/M
3300018067\|Ga0184611_1006041	All Organisms → cellular organisms → Bacteria	3189	Open in IMG/M
3300018072\|Ga0184635_10041166	All Organisms → cellular organisms → Bacteria	1766	Open in IMG/M
3300018081\|Ga0184625_10073709	All Organisms → cellular organisms → Bacteria	1737	Open in IMG/M
3300020005\|Ga0193697_1001491	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	6767	Open in IMG/M
3300025903\|Ga0207680_10510798	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300025926\|Ga0207659_10533530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	996	Open in IMG/M
3300025927\|Ga0207687_10627085	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300025931\|Ga0207644_10094932	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	2229	Open in IMG/M
3300025932\|Ga0207690_10344112	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1178	Open in IMG/M
3300025933\|Ga0207706_10106830	All Organisms → cellular organisms → Bacteria → Acidobacteria	2463	Open in IMG/M
3300025938\|Ga0207704_10675914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300025940\|Ga0207691_10058615	All Organisms → cellular organisms → Bacteria	3502	Open in IMG/M
3300025941\|Ga0207711_10272981	All Organisms → cellular organisms → Bacteria	1556	Open in IMG/M
3300026088\|Ga0207641_10005513	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	10793	Open in IMG/M
3300026116\|Ga0207674_10764354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	933	Open in IMG/M
3300026118\|Ga0207675_100767930	All Organisms → cellular organisms → Bacteria → Acidobacteria	976	Open in IMG/M
3300027907\|Ga0207428_10061107	All Organisms → cellular organisms → Bacteria → Acidobacteria	2984	Open in IMG/M
3300028381\|Ga0268264_10316483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1474	Open in IMG/M
3300031184\|Ga0307499_10088648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300031547\|Ga0310887_10483199	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300031716\|Ga0310813_10052873	All Organisms → cellular organisms → Bacteria	2999	Open in IMG/M
3300031740\|Ga0307468_101009657	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300031820\|Ga0307473_11537367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300031858\|Ga0310892_11371301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300032012\|Ga0310902_10537442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300032075\|Ga0310890_11714042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300032174\|Ga0307470_10738976	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	56.86%
Environmental	Environmental	43.14%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	56.86%
Terrestrial	Environmental → Terrestrial	39.22%
Aquatic	Environmental → Aquatic	3.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	39.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	32.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	23.53%
Sediment	Environmental → Aquatic → Sediment	3.92%
Roots	Host-Associated → Plants → Roots	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.76%
Loam	Environmental → Terrestrial → Soil → Loam	9.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.98%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	6.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.96%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.98%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062595_1014018612	3300004479	Soil	RIYVFATEVPGGSPPGDALQGRLAAVRELREALRRKSGLSVVDDRAQADVTVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEHHGELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPHSLTAMAFVRPAA*
Ga0062594_1016656621	3300005093	Soil	VRGRRRRRRVSSIRDRCHIGEWSDNSVMTVVVALALSAVLALGGGQAKTHGKESVRIYVVAAEVPAGSPPGDALQGRLAAVRELREALRRKKGLRVVDDRAQADVIVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHQGELKGMGPGTGSRAAKDAADDLLKWVERNRPDRPPPS*
Ga0065715_102475982	3300005293	Miscanthus Rhizosphere	MHRQDDQWSDNFDMTVVVALVLCSVLGGQGKTHGKEPVRVYIFATEVRGGSPPDDALQGRLAAVRDLRDALRRKAGLSVVADRAQAEVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPPS*
Ga0065707_103451722	3300005295	Switchgrass Rhizosphere	MTVVVALVLSAVLGGGGQARTNGKEPVRICVFATAAPGGSPPGDEFQERLAAVRELREALRRKAGLRVVDDQAQADVTVEVTDREQQSAGQGGFGGVKLTPFVNTIIRVRVTFGEHQSELKGMGPGTGSRAAKDAADGLLKWIERNRANRP*
Ga0070676_105959491	3300005328	Miscanthus Rhizosphere	MIVVVALALSAVLALGGGQAKTHGKESVRIYVVAAEVPAGSPPGDALQGRLAAVRELREALRRKKGLRVVDDRAQADVIVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPPS*
Ga0070690_1007325151	3300005330	Switchgrass Rhizosphere	MHRQDDQWSDNFDMTVVVALVLCSVLGGQGKTHGKEPVRVYIFATEVRGGSPPDDALQGRLAAVRDLRDALRRKAGLSVVADRAQAEVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEHHGELKGMAPGTGSRAAKDAADGLLKWIERNRADPLPPS*
Ga0066388_1000934142	3300005332	Tropical Forest Soil	MRCQDDERSDNLNMTVVVALVLCTVLGSQAKPHAKESVRIYVFATEVRDGSPPGDALQRRLAAVRELREALRRKAGLSVVDDQAQADVTVEVTDREQQSAGEGGFGGVKLTPFVNTIIRMRVTFGEHQSELKGMGPGTGSRAAKDAADGLFKWIERNRPSP*
Ga0066388_1026319671	3300005332	Tropical Forest Soil	MTVVVALALCAVLGGGQAKTHGKDSVRVYVFATEVPDGAPPGDALQGRLAAVRELREALRRKAGLRVVDDRAQADVTVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHRGELKGMAPGAGSRAAKDAADGLSKWIERNR*
Ga0070687_1008132401	3300005343	Switchgrass Rhizosphere	MHRQDDQWSDNFDMTVVVALVLCSVLGGQGKTHGKEPVRVYIFATEVRGGSPPDDALQGRLAAVRDLRDALRRKAGLSVVADRAQAEVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKDAADGLLKWIERNRADP
Ga0070669_1000470642	3300005353	Switchgrass Rhizosphere	MTVVVALALSAVLALGGGQAKTHGKESVRIYVVAAEVPAGSPPGDALQGRLAAVRELREALRRKKGLRVVDDRAQADVIVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHQGELKGMGPGTGSRAAKDAADDLLKWVERNRPDRPPPS*
Ga0070688_1001412531	3300005365	Switchgrass Rhizosphere	MIVVVALALSAVLALGGGQAKTHGKESVRIYVVAAEVPAGSPPGDALQGRLAAVRELREALRRKKGLRVVDDRAQADVIVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHQGELKGMGPGTGSRAAKDAADDLLKWVERNRPDRPPPS*
Ga0070659_1003719942	3300005366	Corn Rhizosphere	MTVVVALALSAVLALGGGQAKTHGKESVRIYVVAAEVPAGSPPGDALQGRLAAVRELREALRRKKGLRVVDDRAQADVIVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHQGELKGMGPGTGSRAAKDAADDLLKWVERNRPDRQPPS*
Ga0070708_1007577121	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MCIDSNAMGGSECTSGFRQSAMHSQDDEWSDNLEMTVVVALLLCAVLGGGQAKTHGKESVRIYVFATEVPGDSQPGDALQGRLAAVRELREALRRKAGLSVVDDRAQADVTVEVTDREQQSAGEGGFGGVKLTPFLNTIIRVRVTLGEHQSELKGMGPGTGSRAAKDAADGLLKWIERHRADRLPPS*
Ga0070685_112045411	3300005466	Switchgrass Rhizosphere	VVVALVLCSVLGGQGKTHGKEPVRVYIFATEVRGGSPPDDALQGRLAAVRDLRDALRRKAGLSVVADRAQAEVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPPS*
Ga0073909_103013752	3300005526	Surface Soil	MTVVVALMLCAVLAGGQAKTHGKESIRVYISAAEVRGGSPPDDALQGRLAAVRELRDALRRKAGLSVVDDRAQADVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEHQGELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPS*
Ga0070672_1006274502	3300005543	Miscanthus Rhizosphere	MHRQDDQRSDNFDMTVVVALVLCSVLGGQGKTHGKEPVRVYIFATEVRGGSPPDDALQGRLAAVRDLRDALRRKAGLSVVADRAQAEVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPPS*
Ga0068857_1008707831	3300005577	Corn Rhizosphere	MTVVVALVLCAVLGGGQAKTHGKESIRIYVVAAEVPGGSPPGDALQGRLAAVRELREALRRKAGLSVVDDRAQADITVEVTDREQQRAGEGGFGGVKLTPFVNTIIRVRVTFGEHHAELKGMGTGTGSRAAKDAADGLLKWIERQRRSRAVAGFNRGDTGDPCPTRSAIGHRRLSTASA*
Ga0068859_1001964643	3300005617	Switchgrass Rhizosphere	VVVALALSAVLALGGGQAKTHGKESVRIYVVAAEVPAGSPPGDALQGRLAAVRELREALRRKKGLRVVDDRAQADVIVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHQGELKGMGPGTGSRAAKDAADDLLKWVERNRPDRPPPS*
Ga0066905_1002493442	3300005713	Tropical Forest Soil	MRSQDDEWSDNLDMTVVVALVLCTALVGGQAKTHGKESIRVYVFATEVRGGSPPDDALQGRLAAVRELREALRRKAGLSVVDDRAQADVTVEVTDREQQNAGEGGFGGVKLTRFVNTIIRMRVTFGEHQSELKGMGPGAGSRAAKDAADSLFKWIERNRASG*
Ga0066905_1008667251	3300005713	Tropical Forest Soil	MRSQGDEWSDNLDMTVVLALLLCAVPGFGQAKPHGKESVRIYVFATEVRGDSPPGDALQRRLAAVRELREALRRKAGLSVVDDQAQAEVTVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHQSDLKGMGPGTGSRAAKDAADGLFKWIERNRASG*
Ga0068866_103339381	3300005718	Miscanthus Rhizosphere	MHRQDDQWSDNFDMTVVVALVLCSVLGGQGKTHGKEPVRVYIFATEVRGGSPPDDALQGRLAAVRDLRDALRRKAGLSVVADRAQAEVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKDAADGLLKWIERNRADPLPPS*
Ga0066903_1006204573	3300005764	Tropical Forest Soil	MRGQDDERSDNLDMTVVVALVLCTVLGSQAKPHAKESVRIYVFATEVRGGSPAGDALQRRLAAVRELREALRRKAGLSVVDDQAQADVTVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHQSELKGMGPGTGSRAAKDAADGLFKWIERNRPSP*
Ga0068863_1003879332	3300005841	Switchgrass Rhizosphere	RVRQSSMHSQDDEWSDNLDMTVVVALVLSAVLGGGQAKTHGKESVRIYVFATEVPGGSPPGDALQGRLAAVRELRDALRRKAGLSVVDDRAQADVTVEVTDREQQNAGEGGFGGVKLTRFVNTIIRVRVTFGEHQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPS*
Ga0068863_1020891731	3300005841	Switchgrass Rhizosphere	MTGVVVLVLSAVLGSGQARTDVKEPVRIYVFATEAPGGSSPGDALQGRLAAVRELREALRHKKELRVVADRAHADAIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKDAADGLLKWIERNRA
Ga0068862_1008898882	3300005844	Switchgrass Rhizosphere	MIVVVALALSAVLALGGGQAKTHGKESVRIYVVAAEVPAGSPPGDALQGRLAAVRELREALRRKKGLRVVDDRAQADVIVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHQGELKGMGPGTGSRAAKDAADDLLKWVERNRPDRQPPS*
Ga0081455_100223415	3300005937	Tabebuia Heterophylla Rhizosphere	MHSGFRQSSMRSQDHEWSDNLDMTVVVALVLSAVLGGGQAKTHGKDSVRVYVFATEVRGDSPPGDALQGRLAAVRDLREALRRKSGLSVVDDRAQADVTVEVTDREQQSAGEGGFGGVKLTRFVNTIIRVRVTLGEHQSELKGMGQGTGSRAAKDAADGVFKWIERNRAGA*
Ga0068871_1020426651	3300006358	Miscanthus Rhizosphere	QWSDNFDMTVVVALVLCSVLGGQGKTHGKEPVRVYIFATEVRGGSPPDDALQGRLAAVRDLRDALRRKAGLSVVADRAQAEVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPPS*
Ga0074055_110420721	3300006573	Soil	MHRQDDEWSDNFDMTVIVALMLCAVLAGGQARTHGKEPVRIYIVAAEVPGGSPPGDSALQGRLAAVRELRDALRRKAGLSVVDDRALADVTVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEHQSELKGMGPGTGTRAAKDAADGLLKWIERNRADRPPPS*
Ga0074053_111088941	3300006575	Soil	MHRQDDEWSDNFDMTVVVALALSAVLGGGQAKTHGKESIRVYISAAEVRGGSPPDDALQGRLAAVRELRDALRRKAGLSVVDDRAQAEVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEHQGELKGMGPGTGSRA
Ga0074059_100113932	3300006578	Soil	MHCQDDEWSDNFDMTVIVALMLCAVLAGGQARTHGKEPVRIYIVAAEVPGGSPPGDSALQGRLAAVRELRDALRRKAGLSVVDDRALADVTVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEHQSELKGMGPGTGTRAAKDAADGLLKWIERNRADQPPP
Ga0075428_1001725372	3300006844	Populus Rhizosphere	MTVVVALVLSAVLGGGGQARTNGKEPVRICVFATEAPGGSPPGDALQGRLAAVRELREALRRKAGLRVVDDQAQADVTVEVTDREQQSAGQGGFGGVKLTPFVNTIIRVRVTFGEHQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPLS*
Ga0075433_100383564	3300006852	Populus Rhizosphere	MTVVVALVLCAVLGDAQAKTHGKESVRIYVFATEVRGGSPPDDALQGRLAAVRELREALRRKSGLSVVDDRAQADVTVEVTDREQQRAGEGGFGGVKLTPFVNTIIRVRVTFGEHQSDLKGMGPGTGSRAAKDAADGLLKWIERNRATL*
Ga0075434_1000530924	3300006871	Populus Rhizosphere	MTVVVALVLCAVLGDAQAKTHGKESVRIYVFATEVRGGSPPDDALQGRLAAVRELREALRRKSGLSVVDDRAQADVTVEVTDREQQRAGEGGFGGVKLTPFVNTIIRVRVTFGEHQSDLKGMGPSTGSRAAKDAADGLLKWIERNRATL*
Ga0075434_1021684191	3300006871	Populus Rhizosphere	MHQRVRQSSMHSQDDEWSDNLDMTVVVALVLSAVLGGGQAKTHGKESVRIYVFATEVPGGSPPGDALQGRLAAVRELRDALRRKAGLSVVDDRAQADVTVEVTDREQQNAGEGGFGGVKLTRFVNTIIRVRVTFGEHQSELKGMGPG
Ga0068865_1019206231	3300006881	Miscanthus Rhizosphere	PSATVRGRRRSRGVSSIRDRCHIGEWSDNSVMIVVVALALSAVLALGGGQAKTHGKESVRIYVVAAEVPAGSPPGDALQGRLAAVRELREALRRKKGLRVVDDRAQADVIVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHQGELKGMGPGTGSRAAKDAADDLLKWVERN
Ga0075419_104007621	3300006969	Populus Rhizosphere	MTVVVALALSAVLALGGGQAKTHGKESVRIYVFATEVRGGSPPDDALQGRLAAVRELREALRRKAGLRVVDDQAQADVTVEVTDREQQSAGQGGFGGVKLTPFVNTIIRVRVTFGEHQGELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPLS*
Ga0075435_1001134362	3300007076	Populus Rhizosphere	MAVAVILAICALLGGQAQTYGKESVRLYVFTAEAAPGSSPDETVKGRLAAVRELRDALRHKAGLSVVDDRAHADVVVEVIGREQQDAGEGGFGGVKLGAIVTTTIRLVVTSGEHQTEMKGMGSGSGSRAAKDAADRLLKWIVRNHLDRS*
Ga0075435_1010999422	3300007076	Populus Rhizosphere	MTVVVALVLCAVLGDAQAKTHGKESVRIYVFATEVRGDSPPGDALQGRLAAVRELREALRRKAGLSVVDDRAQADVTVEVTDRERQSAGEGGFGGVKLTPFVNTIIRLRVTFGEHQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPS
Ga0066710_1046213121	3300009012	Grasslands Soil	DNLDMTVVVAFVLCAVLGGGQAKTHGKESVRIYVFATQVPGGSPPGDALQERLAAVRELREALRRKAGLSVVDDRAQADVTVEVTDRERQSAGEGGFGGVKLTPFVNTIIRLRVTFGEHQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPS
Ga0105245_106910842	3300009098	Miscanthus Rhizosphere	HRQDDQWSDNFDMTVVVALVLCSVLGGQGKTHGKEPVRVYIFSTEVRGGSPPDDALQGRLAAVRDLRDALRRKAGVSVVADRAQAEVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPPS*
Ga0114129_100055104	3300009147	Populus Rhizosphere	MTVAVMLAICALLGGQAQTYGKESVRLYVFTAEAAPGSSPDETVKGRLAAVRELRDALRHKAGLSVVDDRAHADVVVEVIGREQQDAGEGGFGGVKLGAIVTTTIRLVVTSGEHQTEMKGMGSGSGSRAAKDAADRLLKWIVRNRLDRS*
Ga0114129_126231741	3300009147	Populus Rhizosphere	MRSQDDEWSDNLEMTVVVALVLSAVLGGGQGKTHGKESVRIYVFATEVRGGSPPDDALQGRLAAVRELREALRRKSGLSVVDDRAQADVTVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEHQSDLKGMGPGTGSRAAKDAADGLLKWIERNRATL*
Ga0111538_101272922	3300009156	Populus Rhizosphere	MTVVVALVLCGLLGGGQARTHGKESVRIYVFATEVAGGSPPGDALQGRLAAVRELRDALRRKKGLSVVDDRAQADVTVEVTDREQQSAGEGGFGGVKLTPFVNTIVRVRVTFGEHQSELKGMGPGTGSRAAKDAADGLLKWIERNRANLP*
Ga0075423_101191892	3300009162	Populus Rhizosphere	MTVAVMLAICALLGGQAQTYGKESVRLYVFTAEAAPGSSPDETLKGRLAAVRELRDALRHKAGLSVVDDRAHADVVVEVIGREQQDAGEGGFGGVKLGAIVTTTIRLVVTSGEHQTEMKGMGSGSGSRAAKDAADRLLKWIVRNRLDRS*
Ga0075423_109744241	3300009162	Populus Rhizosphere	TAVVALVLSAAVSGGQAKTHGKESVSIYICATEVPGGSPPGDSALQGRLAAVRELRDALRRKAGLRVVDDRAQADVTVEVTDREQQNAGEGGFGGVKLTRFVNTIIRVRVTFGEHQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPS*
Ga0105242_103657752	3300009176	Miscanthus Rhizosphere	GGQAKTHGKESVRIYVVAAEVPGGSPPGDALQGRLAAVRELREALRRKAGLRVVDDRAQADVTVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHQSELKGMGPGTGSRAAKDAADGLLKWIERNRADPPS*
Ga0105248_106319911	3300009177	Switchgrass Rhizosphere	MTVVVALVLGAVLSGGSQARTHGKEPVRIYVFATEVQGGSPPGDALQGRLAAVRELREALRRKSGLSVVDDRAQADVTVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVAFGEHHGELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPSLTAMAFVRPAA*
Ga0126376_102998522	3300010359	Tropical Forest Soil	MKIDSNAMVEARNAQRFCHSSMRGQGDEWSDNFDMTVVVALLLSAVLAGGQAKTHGKELIRIYVFATEVPGGSPPGDALQGRLAAVRELRDALRRKSGLSVVDDPAQAEVTVEVTDREQTSAGEGGFGGVKLTPLVNTIIRLRVTFGERQGELKGMGPGAGSRAAKDAADGVSKWIERNRASG*
Ga0126372_102530932	3300010360	Tropical Forest Soil	MRCQDDERSDNLNMTVVVALVLCTVLGSQAKPHAKESVRIYVFATEVRDGSPPGDALQRRLAAVRELREALRRKAGLSVVDDQAQADVTVEVTDREQQSAGEGGFGGVKLTPFVNTIIRMRVTFGEHQSELKGMGPGT
Ga0126372_122617191	3300010360	Tropical Forest Soil	MRSQGDEWSDNFEMAVVVAVLACAVLAGGQAKTHGKESVRIYVFAAEAPDGSPPGDALQGRLAAVRELRDALRRKSGLSVVDDRPQADVTVEVTDREQTSAGEGGFGGVKLTPLVNTIIRVRVTFGERQGELKGMAPGAGSRAAKDAADGLAKWIERNRPSP*
Ga0126377_103633311	3300010362	Tropical Forest Soil	SDNHDMTVLVALALCTVLAGGQAKTHGKESVRVYVFATEVRGGSPPDDALQGRLAAVRELREALRRKSGLSVVDDRAQADVTVEVTDREQQNAGEGGFGGVKLTRFVNTIIRMRVTFGEHQSELKGMGQGTGSRAAKDAADGLSKWIERNRASG*
Ga0134122_118101761	3300010400	Terrestrial Soil	EWSDNFDMTVVVTLVLCAVLAGGQARTHGKEPVRIYVFATEVPGGSPAGDALQGRLAAVRDLRDALRRKAGLSVVADRAQAEVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKDAADGLLKWIERNRADPPS*
Ga0134123_112522761	3300010403	Terrestrial Soil	MHRQDDQWSDNFDMTVVVALVLCSVLGGQGKTHGKEPVRVYIFATEVRGGSPPDDALQGRLAAVRDLRDALRRKAGLSVVADRAQAEVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKDAADGLLKWIERNRPDRLPLSQRNLRMPPA*
Ga0137436_11125231	3300011423	Soil	HGKESVRIYVVAAEVPGGSPPGDALQGRLAAVRELREALRRKAGLRVVDDRAQADVTVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHQGELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPSDGRAVAGAKAFVPLAA*
Ga0150985_1135930033	3300012212	Avena Fatua Rhizosphere	FVVVLALSAFLAQHQPQGKESVRIYVFAAEPVDASPDDHRLEGRRAAVRDLRDALRHKAGLTIVDDRAHADVLVEVTDQEQDSLGEGGFCGARITPLVNTTIRLRVTAGPHDSEMKGTGPGTGSRAAKDAADKLLRWIVRNRIDALPDRK*
Ga0137371_102501352	3300012356	Vadose Zone Soil	MHSQDEWSDNFDMTVVVALVLCAVAGAGQAKTHGKESVRIYVFATEAPGGSPPGDALQGRLAAVRELREALRRKAGLSVVDDRAQADVTVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHHSELKGMGPGTGSRAAKDAADGLLKWI
Ga0137375_113213241	3300012360	Vadose Zone Soil	MHSQDDEWSDNLEMTVVVALLLCAVPGGGQAKTHGKESVRIYVFATEVPGGSQPGDALQGRLAAVRELREALRRKAGLSVVDDRAQADVTVEVTDREQQSAGEGGFGGVKLTPFLNTIIRVRVTLGEHQSELKGMGPGTGSRAAKDAADGLLKWIER
Ga0150984_1053578342	3300012469	Avena Fatua Rhizosphere	MTFVVVLALSAFLAQHQPQGKESVRIYVFAAEPVDASPDDHRLEGRRAAVRDLRDALRHKAGLTIVDDRAHADVLVEVTDQEQDSLGEGGFGGARITPLVNTTIRLRVTAGPHDSEMKGTGPGTGSRAAKDAADKLLRWIVRNRIDALPDRK*
Ga0126375_104924461	3300012948	Tropical Forest Soil	MRSQDDEWSDNLDMTVVVALVLCTALVGGQAKTHGKESIRAYVFATEVRGGSPPDDALQGRLAAVRELREALRRKAGLSVVDDRAQADVTVEVTDREQQNAGEGGFGGVKLTRFVNTIIRMRVTFGEHQSELKGMGPGAGSRAAKDAADSLFKWIERNRASG*
Ga0126375_116069381	3300012948	Tropical Forest Soil	LLCAVPGFGQAKTHAKQSVRVYVFATEVRDGSPPGDALQRRLAAVRELREALRRKAGLSVVDDQAQADVTVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHQSELKGMGPGTGSRAAKDAADGLLKWIERNRPSP*
Ga0164303_102031262	3300012957	Soil	MHSQDDEWSDNLDMTVVVALVLGAVLGGGQAKTHGKESVRIYIFATEVPGGSPPGDSALQGRLAAVRELRDALRRKAGLSVVDDRAQADVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEHQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPRS*
Ga0164305_101928652	3300012989	Soil	MTVVVALMLCAVLAGGQAKTHGKESIRVYISAADVRGGSPPDDALQGRLAAVRELRDALRRKAGLSVVDDRAQADVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEHQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPRS*
Ga0157378_102738732	3300013297	Miscanthus Rhizosphere	MHRQDDQWSDNFDMTVVVALVLCSVLGGQGKTHGKEPVRVYIFATEVRGGSPPDDALQGRLAAVRDLRDALRRKAGLSVVADRAQAEVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEHQGELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPPS*
Ga0163162_100508941	3300013306	Switchgrass Rhizosphere	SEYPGGASSILMHRQDDQWSDNFDMTVVVALVLCSVLGGQGKTHGKEPVRVYIFATEVRGGSPPDDALQGRLAAVRDLRDALRRKAGLSVVADRAQAEVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPPS*
Ga0157380_124109301	3300014326	Switchgrass Rhizosphere	MDLRHGLLGGQARTRGKEPVRIYVFATEVPGGSPHGDALQGRLAAVRELREALRRKAGLSVVDDRVQADVTVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEHHGELKGMAPGTGSRAAKDAADGLLKWIERNRAD
Ga0157377_111403372	3300014745	Miscanthus Rhizosphere	MHHRVRQSSMHSQDDEWSDNLDMTVVVALVLSAVLGGGQAKTHGKESVRIYVFATEVPGGSPPGDALQGRLAAVRELRDALRRKAGLSVVADRAQADVTVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKAVS
Ga0132258_103006662	3300015371	Arabidopsis Rhizosphere	MRSQDDEWSDNFDMTVVVALLLSAVLGGGQAKTHGKESVRVYVFATEAPDGSPPGDALQGRLAAVRELREALRRKAGLRVVDDRTQADVTVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHRSDLKGMAPGTGSRAAKDAADSVLKWIERNRATL*
Ga0132258_123175332	3300015371	Arabidopsis Rhizosphere	MAVVVALVLCSVLGGQAKTHGKEPVRVYIFATEVRGGSPPDDALQGRLAAVRDLRDALRRKAGLSVVADRAQADVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPPS*
Ga0132256_1003360112	3300015372	Arabidopsis Rhizosphere	MHRQDDEWSDNFDMAGVVALMLCAVLAGGQAKTHGKESIRVYISAAGVRGGSPPDDALQGRLAAVRELRDALRRKAGLSVVDDRAQADVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEHQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPRS*
Ga0132257_1004541812	3300015373	Arabidopsis Rhizosphere	MRSQDDEWSDNFDMTVVVALLLSAVLGGGQAKTHGKESVRVYVFATEAPDGSPPGDALQGRLAAVRELREALRRKAGLRVVDDRTQADVTVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHRSDLKGMAPGTGSRAAKDAADSVLKWIER
Ga0132257_1008330832	3300015373	Arabidopsis Rhizosphere	MHRQDDEWSDNFDMAGVVALMLCAVLAGGQAKTHGKESIRVYISAADVRGGSPPDDALQGRLAAVRELRDALRRKAGLSVVDDRAQADVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEHQSELKGMGPGTGSRAAKDAADGLLKWIERNR
Ga0132257_1017156862	3300015373	Arabidopsis Rhizosphere	MTVVVALVLCSVLGGQGKTHGKEPVRVYIFATEVRGGSPPDDALQGRLAAVRDLRDALRRKAGLSVVADRAQAEVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKDAADGLLKWIERNRANRPPPA*
Ga0132257_1035363322	3300015373	Arabidopsis Rhizosphere	MHQRVRQSSMHSQDDEWSDNLDMTVVVALVLSAVLGGGQAKTHGKESVRIYLFATEVPGGSAPGDALQGRLAAVRELRDALRRKAGLSVVDDRAQADVTVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTYGEHQSELKGMGPG
Ga0132255_1018969152	3300015374	Arabidopsis Rhizosphere	MHRQDDQWSDNFDMTVVVALVLCSVLGGQGKTHGKEPVRVYIFATEVRGGSPPDDALQGRLAAVRDLRDALRRKAGLSVVADRAQAEVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKDAADGLLKWIERNRGDRPPPPS*
Ga0163161_116411201	3300017792	Switchgrass Rhizosphere	LSAVLALGGGQAKTHGKESVRIYVVAAEVPAGSPPGDALQGRLAAVRELREALRRKAGLRVVDDRAQADVTVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPPS
Ga0184611_10060412	3300018067	Groundwater Sediment	MTVVVALVLSTVLAARGGQAKTHGKESVRIYVVAAEVPGGSPPGDALQGRLAAVRELREALRRKAGLRVVDDRAQADVTVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPSDGLAVGGAKAFVPPAA
Ga0184635_100411662	3300018072	Groundwater Sediment	MTVVVALVLSTVLAARGGQAKTLGKESVRIYVVAAEVPGGSPPGDALQGRLAAVRELREALRRKAGLRVVDDRAQADVTVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPSDGLAVGGAKAFVPPAA
Ga0184625_100737093	3300018081	Groundwater Sediment	MTVVVALVLSTVLAARGGQAKTHGKESVRIYVVAAEVPGGSPPGDALQGRLAAVRELREALRRKAGLRVVDDRAQADVTVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHQSELKGMGPGTGSRAAKDAADGLLKWIERNRQDRPPLS
Ga0193697_10014914	3300020005	Soil	MTVVVALVLSTVLAARGGQAKTHGKESVRIYVVAAEVPGGSPPGDALQGRLAAVRELREALRRKAGLRVVDDRAQADVTVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPSDGRAVAGAKAFVPLAA
Ga0207680_105107982	3300025903	Switchgrass Rhizosphere	MHRQDDQWSDNFDMTVVVALVLCSVLGGQGKTHGKEPVRVYIFATEVRGGSPPDDALQGRLAAVRDLRDALRRKAGLSVVADRAQAEVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPPS
Ga0207659_105335302	3300025926	Miscanthus Rhizosphere	MHHRVRQSSMHSQDDEWSDNLDMTVVVALVLSAVLGGGQAKTHGKESVRIYVVAAEVPAGSPPGDALQGRLAAVRELREALRRKKGLRVVDDRAQADVIVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPS
Ga0207687_106270851	3300025927	Miscanthus Rhizosphere	QWSDNFDMTVVVALVLCSVLGGQGKTHGKEPVRVYIFATEVRGGSPPDDALQGRLAAVRDLRDALRRKAGLSVVADRAQAEVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPPS
Ga0207644_100949323	3300025931	Switchgrass Rhizosphere	MHRQDDQWSDNFDMTVVVALVLCSVLGGQGKTHGKEPVRVYIFATEVRGGSPPDDALQGRLAAVRDLRDALRRKAGLSVVADRAQAEVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKDAADGLLKWI
Ga0207690_103441122	3300025932	Corn Rhizosphere	MIVVVALALSAVLALGGGQAKNHGKESVRIYVVAAEVPAGSPPGDALQGRLAAVRELREALRRKKGLRVVDDRAQADVIVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHQGELKGMGPGTGSRAAKDAADDLLKWVERNRPDRQPPS
Ga0207706_101068302	3300025933	Corn Rhizosphere	MIVVVALALSAVLALGGGQAKTHGKESVRIYVVAAEVPAGSPPGDALQGRLAAVRELREALRRKKGLRVVDDRAQADVIVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHQGELKGMGPGTGSRAAKDAADDLLKWVERNRPDRPPPS
Ga0207704_106759142	3300025938	Miscanthus Rhizosphere	IGEWSDNSVMIVVVALALSAVLALGGGQAKTHGKESVRIYVVAAEVPAGSPPGDALQGRLAAVRELREALRRKKGLRVVDDRAQADVIVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHQGELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPPS
Ga0207691_100586154	3300025940	Miscanthus Rhizosphere	MTVVVALVLCSVLGGQGKTHGKEPVRVYIFATEVRGGSPPDDALQGRLAAVRDLRDALRRKAGLSVVADRAQAEVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPPS
Ga0207711_102729812	3300025941	Switchgrass Rhizosphere	MTVVVALVLGAVLSGGSQARTHGKEPVRIYVFATEVQGGSPPGDALQGRLAAVRELREALRRKSGLSVVDDRAQADVTVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVAFGEHHGELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPSLTAMAFVRPAA
Ga0207641_100055138	3300026088	Switchgrass Rhizosphere	MHHRVRQSSMHSQDDEWSDNLDMTVVVALVLSAVLGGGQAKTHGKESVRIYVFATEVPGGSPPGDALQGRLAAVRELRDALRRKAGLSVVDDRAQADVTVEVTDREQQNAGEGGFGGVKLTRFVNTIIRVRVTFGEHQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPS
Ga0207674_107643541	3300026116	Corn Rhizosphere	MTVVVALVLCAVLGGGQAKTHGKESIRIYVVAAEVPGGSPPGDALQGRLAAVRELREALRRKAGLSVVDDRAQADITVEVTDREQQRAGEGGFGGVKLTPFVNTIIRVRVTFGEHHAELKGMGTGTGSRAAKDAADGLLKWIERQRRSRAVAGFNRGDTGDPCPTRSAIGHRRLSTASA
Ga0207675_1007679302	3300026118	Switchgrass Rhizosphere	MTVVVALALSAVLALGGGQAKTHGKESVRIYVVAAEVPAGSPPGDALQGRLAAVRELREALRRKKGLRVVDDRAQADVIVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHQGELKGMGPGTGSRAAKDAADDLLKWVERNRPDRQPPS
Ga0207428_100611073	3300027907	Populus Rhizosphere	MTVVVALALSAVLALGGGQAKTHGKESVRIYVVAAEVPAGSPPGDALQGRLAAVRELREALRRKKGLRVVDDRAQADVIVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHQGELKGMGPGTGSRAAKDAADDLLKWVERNRPDRPPPS
Ga0268264_103164831	3300028381	Switchgrass Rhizosphere	MHRQDDQWSDNFDMTVVVALVLCSVLGGQGKTHGKEPVRVYIFATEVRGGSPPDDALQGRLAAVRDLRDALRRKAGLSVVADRAQAEVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKDAADGLLKWIERNRANRPPPA
Ga0307499_100886482	3300031184	Soil	HTCIDSSAMLEARNAPAGRQFSVHSQDDEWSDNLDMTVVVALVLCAVLGGGGQAKTHGKESVRIYVFATEVPGGSPPGDALQGRLAAVRELRDALRRKAGLSVVDDRAQADVTVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEHQSELKGMGPGTGTRAAKDAADGLLKWIERNRADRPPPS
Ga0310887_104831991	3300031547	Soil	ESVRIYVFATEVPGGSPPGDALQGRLAAVRELRDALRRKAGLSVVDDRVQADVTVEVTDREQQNAGEGGFGGVKLTRFVNTIIRVRVTFGEHQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPS
Ga0310813_100528733	3300031716	Soil	MTGVVVLVLSAVLGSGQARTDVKEPVRIYVFATEAPGGSSPGDALQGRLAAVRELREALRHKKELRVVADRAHADAIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEQQSELKGMGPGTGSRAAKDAADGLLKWIERNRANRPPPA
Ga0307468_1010096571	3300031740	Hardwood Forest Soil	AVLGATMDLHHGLLGCGQAKAHGKESVRIYVFATEVPGDSPPGAALPGRLAAVRELREALRHKKGLRIVDDRSQADVTVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHQSELKGMGTGTGSRAAKDAADGLLKWIQRNRPDRPPPPVDGLPSAAMAFVPPAA
Ga0307473_115373671	3300031820	Hardwood Forest Soil	TALGGGQAKAHGKESVRIYVFATEVPGGSPAGDARQGRLAAVRELRDALRRKSGLSVVDDRAQADVTVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHHSELKGMGPGTGSRAAKDAADGLLKWIERNRSDHPPPS
Ga0310892_113713011	3300031858	Soil	MHQRVRQSSMHSQDDEWSDNLDMTVVVALVLSAVLGGGQAKTHGKESVRIYVFATEVPGGSAPGDALQGRLAAVRELRDALRRKAGLSVVDDRVQADVTVEVTDREQQNAGEGGFGGVKLTRFVNTIIRVRVTFGEHQSELKGMGP
Ga0310902_105374422	3300032012	Soil	MHSQDDEWSDNLDMTVVVALVLSAVLGGGQAKTHGKESVRIYVFATEVPGGSPPGDALQGRLAAVRELRDALRRKAGLSVVDDRAQADVTVEVTDREQQNAGEGGFGGVKLTRFVNTIIRVRVTFGEHQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPS
Ga0310890_117140421	3300032075	Soil	MTVVVALMLCAVLAGGQAKTHGKESIRVYISAADVRGGSPPDDALQGRLAAVRELRDALRRKAGLSVVDDRAQADVIVEVTDREQQNAGEGGFGGVKLTPFVNTIIRVRVTFGEHQSELKGMGPGTGSRAAKD
Ga0307470_107389761	3300032174	Hardwood Forest Soil	ESVRVYVFATEVPGGSPPGDALQGRLGAVRELREALRRKAGLSVVDDRAQADVTVEVTDREQQSAGEGGFGGVKLTPFVNTIIRVRVTFGEHQSELKGMGPGTGSRAAKDAADGLLKWIERNRADRPPPL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101234

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences