Metagenome / Metatranscriptome Family F101238

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101238
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	47 residues
Representative Sequence	FLLAIAGLTVSYLLLAQGAKWAFYRLWQPAGFAPAPLMRAHLPLIERS
Number of Associated Samples	82
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.96 %
% of genes near scaffold ends (potentially truncated)	96.08 %
% of genes from short scaffolds (< 2000 bps)	92.16 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.804 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (44.118 % of family members)
Environment Ontology (ENVO)	Unclassified (30.392 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.098 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.21% β-sheet: 0.00% Coil/Unstructured: 65.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF03241	HpaB	6.86
PF13610	DDE_Tnp_IS240	3.92
PF02535	Zip	3.92
PF04392	ABC_sub_bind	2.94
PF03706	LPG_synthase_TM	2.94
PF12680	SnoaL_2	1.96
PF00571	CBS	1.96
PF07366	SnoaL	1.96
PF00294	PfkB	0.98
PF13194	DUF4010	0.98
PF00034	Cytochrom_C	0.98
PF04075	F420H2_quin_red	0.98
PF02705	K_trans	0.98
PF00676	E1_dh	0.98
PF11339	DUF3141	0.98
PF13714	PEP_mutase	0.98
PF00872	Transposase_mut	0.98
PF00005	ABC_tran	0.98
PF02798	GST_N	0.98
PF00239	Resolvase	0.98
PF11794	HpaB_N	0.98
PF03631	Virul_fac_BrkB	0.98
PF02543	Carbam_trans_N	0.98
PF00009	GTP_EFTU	0.98
PF03699	UPF0182	0.98
PF00702	Hydrolase	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2368	Aromatic ring hydroxylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	6.86
COG0428	Zinc transporter ZupT	Inorganic ion transport and metabolism [P]	3.92
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	2.94
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.94
COG0567	2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes	Energy production and conversion [C]	0.98
COG1071	TPP-dependent pyruvate or acetoin dehydrogenase subunit alpha	Energy production and conversion [C]	0.98
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.98
COG1615	Uncharacterized membrane protein, UPF0182 family	Function unknown [S]	0.98
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.98
COG2192	Predicted carbamoyl transferase, NodU family	General function prediction only [R]	0.98
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.98
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	0.98
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
All Organisms	root	All Organisms	40.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
cellular organisms	root	All Organisms → cellular organisms	40.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.22 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.55 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.98 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.63 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.98 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.98 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.88 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.98 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.98 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.88 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.96 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.98 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.98 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.98 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.98 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.88 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.96 %
Skermanella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella	0.98 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.98 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	0.98 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.98 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.88 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.96 %
Skermanella aerolata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella aerolata	0.98 %
Magnetospirillum marisnigri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum marisnigri	0.98 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.98 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.98 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.88 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.96 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	0.98 %
Skermanella aerolata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella aerolata	0.98 %
Magnetospirillum marisnigri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum marisnigri	0.98 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.98 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_10243180	Not Available	999	Open in IMG/M
3300004080\|Ga0062385_10433067	Not Available	795	Open in IMG/M
3300004080\|Ga0062385_10989552	Not Available	564	Open in IMG/M
3300004082\|Ga0062384_100644913	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300004091\|Ga0062387_100674332	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300004091\|Ga0062387_101417488	Not Available	554	Open in IMG/M
3300004092\|Ga0062389_103444638	Not Available	593	Open in IMG/M
3300004092\|Ga0062389_104847765	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300004152\|Ga0062386_100476278	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300005437\|Ga0070710_10474965	Not Available	851	Open in IMG/M
3300006032\|Ga0066696_11066663	Not Available	514	Open in IMG/M
3300006358\|Ga0068871_101870115	Not Available	570	Open in IMG/M
3300010341\|Ga0074045_10328959	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300010341\|Ga0074045_10729528	Not Available	628	Open in IMG/M
3300012918\|Ga0137396_11248306	Not Available	520	Open in IMG/M
3300012927\|Ga0137416_11658065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	583	Open in IMG/M
3300012987\|Ga0164307_11339164	Not Available	600	Open in IMG/M
3300014657\|Ga0181522_10888630	Not Available	549	Open in IMG/M
3300015206\|Ga0167644_1092752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	919	Open in IMG/M
3300015241\|Ga0137418_10593634	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300016387\|Ga0182040_10050634	All Organisms → cellular organisms → Bacteria	2583	Open in IMG/M
3300016387\|Ga0182040_10363346	Not Available	1126	Open in IMG/M
3300016422\|Ga0182039_10716889	Not Available	883	Open in IMG/M
3300017942\|Ga0187808_10472579	Not Available	579	Open in IMG/M
3300017943\|Ga0187819_10074757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2018	Open in IMG/M
3300017943\|Ga0187819_10419924	Not Available	768	Open in IMG/M
3300017995\|Ga0187816_10581188	Not Available	504	Open in IMG/M
3300018014\|Ga0187860_1154757	Not Available	978	Open in IMG/M
3300018022\|Ga0187864_10124957	Not Available	1304	Open in IMG/M
3300018040\|Ga0187862_10883726	Not Available	512	Open in IMG/M
3300020579\|Ga0210407_10472377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum marisnigri	980	Open in IMG/M
3300020580\|Ga0210403_10573261	Not Available	913	Open in IMG/M
3300020581\|Ga0210399_10953206	Not Available	693	Open in IMG/M
3300020582\|Ga0210395_10475008	Not Available	941	Open in IMG/M
3300020583\|Ga0210401_10576456	Not Available	987	Open in IMG/M
3300021168\|Ga0210406_10613842	Not Available	847	Open in IMG/M
3300021168\|Ga0210406_10807910	Not Available	713	Open in IMG/M
3300021168\|Ga0210406_11343883	Not Available	513	Open in IMG/M
3300021171\|Ga0210405_10375173	Not Available	1121	Open in IMG/M
3300021171\|Ga0210405_10516470	Not Available	935	Open in IMG/M
3300021178\|Ga0210408_10449272	Not Available	1026	Open in IMG/M
3300021178\|Ga0210408_10490927	Not Available	976	Open in IMG/M
3300021181\|Ga0210388_10756905	Not Available	844	Open in IMG/M
3300021358\|Ga0213873_10262523	Not Available	549	Open in IMG/M
3300021403\|Ga0210397_10577570	Not Available	857	Open in IMG/M
3300021432\|Ga0210384_10518493	All Organisms → cellular organisms → Bacteria → Proteobacteria	1072	Open in IMG/M
3300021478\|Ga0210402_10628582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	994	Open in IMG/M
3300022525\|Ga0242656_1082164	Not Available	606	Open in IMG/M
3300022726\|Ga0242654_10035113	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	1337	Open in IMG/M
3300025576\|Ga0208820_1126462	Not Available	598	Open in IMG/M
3300025915\|Ga0207693_10431410	Not Available	1030	Open in IMG/M
3300025928\|Ga0207700_11820456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	535	Open in IMG/M
3300027109\|Ga0208603_1000563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6033	Open in IMG/M
3300027651\|Ga0209217_1012665	Not Available	2753	Open in IMG/M
3300027701\|Ga0209447_10042414	All Organisms → cellular organisms → Bacteria → Proteobacteria	1258	Open in IMG/M
3300027812\|Ga0209656_10024971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	3611	Open in IMG/M
3300027812\|Ga0209656_10098883	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300027812\|Ga0209656_10235464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	872	Open in IMG/M
3300028536\|Ga0137415_11251373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	559	Open in IMG/M
3300028574\|Ga0302153_10337813	Not Available	514	Open in IMG/M
3300028762\|Ga0302202_10226374	Not Available	940	Open in IMG/M
3300028906\|Ga0308309_10026377	All Organisms → cellular organisms → Bacteria	3914	Open in IMG/M
3300028906\|Ga0308309_11568872	Not Available	561	Open in IMG/M
3300030991\|Ga0073994_11964124	Not Available	517	Open in IMG/M
3300031057\|Ga0170834_105158039	Not Available	901	Open in IMG/M
3300031122\|Ga0170822_10736030	Not Available	543	Open in IMG/M
3300031231\|Ga0170824_107239444	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	511	Open in IMG/M
3300031474\|Ga0170818_103542251	Not Available	794	Open in IMG/M
3300031474\|Ga0170818_103760679	Not Available	528	Open in IMG/M
3300031474\|Ga0170818_113766695	Not Available	745	Open in IMG/M
3300031572\|Ga0318515_10486522	Not Available	659	Open in IMG/M
3300031672\|Ga0307373_10222182	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300031679\|Ga0318561_10056068	Not Available	1986	Open in IMG/M
3300031682\|Ga0318560_10638878	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300031712\|Ga0265342_10692935	Not Available	509	Open in IMG/M
3300031736\|Ga0318501_10264093	Not Available	913	Open in IMG/M
3300031736\|Ga0318501_10637062	Not Available	586	Open in IMG/M
3300031751\|Ga0318494_10062958	All Organisms → cellular organisms → Bacteria → Proteobacteria	1983	Open in IMG/M
3300031753\|Ga0307477_10118271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1846	Open in IMG/M
3300031754\|Ga0307475_11110457	Not Available	618	Open in IMG/M
3300031769\|Ga0318526_10263618	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300031778\|Ga0318498_10217446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	865	Open in IMG/M
3300031781\|Ga0318547_10143682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1399	Open in IMG/M
3300031781\|Ga0318547_10471481	Not Available	774	Open in IMG/M
3300031797\|Ga0318550_10472644	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300031833\|Ga0310917_11025975	Not Available	552	Open in IMG/M
3300031845\|Ga0318511_10234041	Not Available	822	Open in IMG/M
3300031890\|Ga0306925_11315830	Not Available	717	Open in IMG/M
3300031896\|Ga0318551_10570366	Not Available	652	Open in IMG/M
3300031897\|Ga0318520_10133518	All Organisms → cellular organisms → Bacteria	1425	Open in IMG/M
3300031945\|Ga0310913_10014016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella aerolata	4876	Open in IMG/M
3300031959\|Ga0318530_10501717	Not Available	504	Open in IMG/M
3300031981\|Ga0318531_10241947	Not Available	814	Open in IMG/M
3300032001\|Ga0306922_10239996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1947	Open in IMG/M
3300032010\|Ga0318569_10074209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1509	Open in IMG/M
3300032039\|Ga0318559_10013432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2995	Open in IMG/M
3300032039\|Ga0318559_10142957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1083	Open in IMG/M
3300032051\|Ga0318532_10046039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1490	Open in IMG/M
3300032065\|Ga0318513_10361262	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300033289\|Ga0310914_10355170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1325	Open in IMG/M
3300033289\|Ga0310914_11004575	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300033290\|Ga0318519_10668542	Not Available	634	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.06%
Host-Associated	Host-Associated	2.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.49%
Aquatic	Environmental → Aquatic	21.57%
Plants	Host-Associated → Plants	2.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.53%
Freshwater	Environmental → Aquatic → Freshwater	21.57%
Peat	Environmental → Terrestrial → Peat	1.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.96%
Roots	Host-Associated → Plants → Roots	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	21.57%
Loam	Environmental → Terrestrial → Soil → Loam	6.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.96%
Clay	Environmental → Terrestrial → Soil → Clay	0.98%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	56.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.98%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.98%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	44.12%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	12.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.96%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.96%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.98%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028574	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_102431801	3300004080	Bog Forest Soil	FVPPSAAFLFAIAGLTVSYLWLAQGAKWAFYRLWRPVAAAPAPTIRAQLPLIGRS*
Ga0062385_104330671	3300004080	Bog Forest Soil	VSYLLLAQGAKWAFYRLWQPAGIAPAPLMRAHLPLIERS*
Ga0062385_109895522	3300004080	Bog Forest Soil	FVPPSAAFLFAIAGLTVSYLLLAQGAKWAFYRLWRPVAAAPAPTIRAQLPLIG*
Ga0062384_1006449131	3300004082	Bog Forest Soil	AGLTVSYLLLAQGAKWVFYRVWPPVGGAPAPLMRVQLPLIERS*
Ga0062387_1006743321	3300004091	Bog Forest Soil	PPSATFLLAIAGLTVSYLLLAQGAKWVFYRVWPPVGGAPAPLMRVQLPLIERS*
Ga0062387_1014174882	3300004091	Bog Forest Soil	PPSATFLLAIAGLTVSYLLLAQGAKWAFYRLWPPVGGAPAPMMRAQLPLIGRP*
Ga0062389_1034446381	3300004092	Bog Forest Soil	LIAAEKPTLDGAFLFAIAGLTVSYLLLAQGAKWAFYHLWPPDGAAPAPLIRAQLPLIGRS
Ga0062389_1048477651	3300004092	Bog Forest Soil	LSYLLLAQGAKWAFYRLWPPNVGPAPPLLRSHLPLTERP*
Ga0062386_1004762782	3300004152	Bog Forest Soil	AGLTASYLLLAQGAKWAFYRLWQPAGLAPAPLVRAHLPLIERS*
Ga0070710_104749651	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	FLFAIAGLTVSYLLLAQGAKWAFYRLWQPAGIAPAPLVRAQLPLIERS*
Ga0066696_110666631	3300006032	Soil	AFLLAIAGLTVSYLLLAQGAKWAFYRLWQPAGFAPAPLMRAHLPVIGRS*
Ga0068871_1018701151	3300006358	Miscanthus Rhizosphere	SAAFLFAIAGLTVSYLLLAQGAKWAFYRLWSPAGAVPAPLIRAPLPLIGRS*
Ga0074045_103289591	3300010341	Bog Forest Soil	SYLLLAQGAKSAFYRLWPPIVGPPAPLLRAHLPLTERP*
Ga0074045_107295281	3300010341	Bog Forest Soil	PPSTAFLIAIAGLTLSYLLLAQGVKWAFYRLWPPIVGPPAPLLRAHLPLTERP*
Ga0137396_112483061	3300012918	Vadose Zone Soil	YLLLAQGAKWAFYRLWQPAGIAPAPLMRAHLPLIERS*
Ga0137416_116580651	3300012927	Vadose Zone Soil	VSYLLLAQGAKWAFYRLWQPAGFAPAPLMRAHLPLIERS*
Ga0164307_113391641	3300012987	Soil	LFAIAGLTVSYLLLAQGAKWAFYRLWQPAGVAPTPLVRAQLPLIERS*
Ga0181522_108886302	3300014657	Bog	SAAFLLAIAGLIVGYLALAQGAKWVFYRVWPASGVASASPLRQALPLIGRA*
Ga0167644_10927523	3300015206	Glacier Forefield Soil	GLTVCYLLLAQVAKWAFYRLSRPVGPPTPLIRAQLPLIGRT*
Ga0137418_105936341	3300015241	Vadose Zone Soil	VIAGLTVSYLLLAQGAKWAFYRLWQPAGFAPAPLMRAHLPLIERS*
Ga0182040_100506345	3300016387	Soil	PPSTNFLLAIAGLTVSYLLLAQSAKWAFYHLWQPAGIATPPQLRSHLPLIARS
Ga0182040_103633462	3300016387	Soil	LTVSYLLLAQAAKSAFYRLWRPEGVASPPHLRSHLPLIA
Ga0182039_107168891	3300016422	Soil	YLLLAQSAKWTFYRLWQPAGLATPPQLRSHLPLIARS
Ga0187808_104725791	3300017942	Freshwater Sediment	SYLLLAQGAKWTFYRRWSPVGAVPAPLIRAQLPLLERS
Ga0187819_100747573	3300017943	Freshwater Sediment	AIAGLTVSYLLLAQSAKRAFYRLWPPDAAAPAPLLRSHLPLLGRS
Ga0187819_104199242	3300017943	Freshwater Sediment	GFVPPSAAFLIAIAGLTLSYLLLAQGAKWAFYRVWPPIVGPPAPLLVRICR
Ga0187816_105811882	3300017995	Freshwater Sediment	IAGLSVSYLLLAQGAKWAFYRLWRPVGAAPAPLIRAQLPLLERL
Ga0187860_11547571	3300018014	Peatland	IAGLTVSYLLLAQIAKQAFYRVWPPSVGPPAPLLRAHLPLIGRS
Ga0187864_101249571	3300018022	Peatland	PSVGFLLAIAGLTVSYLLLAQIAKQAFYRVWPPSVGPPAPLLRAHLPLIGRS
Ga0187862_108837261	3300018040	Peatland	GLTVSYLLLAQIAKQAFYRVWPPSVGPPAPLLRAHLPLIGRS
Ga0210407_104723771	3300020579	Soil	PSSVFLFAIAGLTVSYLLLAQGAKWAFYRLWQPAGLAPAPLVRAHLPLIERS
Ga0210403_105732611	3300020580	Soil	LFAIAGLTVSYLLLAQGAKWAFYRLWRPEGVANPPHLRSHLPLIAGS
Ga0210399_109532061	3300020581	Soil	FAIAGLTVTYLLLAQSAKWAFYRLWRPEGVANPPHLRSHLPLIAGS
Ga0210395_104750081	3300020582	Soil	LAIAGLTVSYLLLAQGAKWAFYRLWQPAGFAPAPLMRAHLPLIERS
Ga0210401_105764562	3300020583	Soil	APPSAAFLCAIAGLTVSYLVLAQGAKWAFYRRRPPVGVAPAPLIRSHLPLMGRS
Ga0210406_106138422	3300021168	Soil	YLLLAQGAKWAFYRLWQPGGFAPAPTIRAQLPLIGRS
Ga0210406_108079102	3300021168	Soil	TVSYLLLAQCAKWAFYRLWQPEGIAPAALMRAHLPLIERS
Ga0210406_113438831	3300021168	Soil	LLLAQGAKWAFYRLWQPEGVAAPPHLRSHLPLIAGS
Ga0210405_103751733	3300021171	Soil	LLAQGAKWAFYRLWRPEGVATPPHLRSHLPLIAGS
Ga0210405_105164701	3300021171	Soil	LLLAQRAKWAFYRLWQPAGIAPAPLMRAHLPLIERS
Ga0210408_104492722	3300021178	Soil	AAFLLAIAGLTVSYLLLAQCAKWAFYRLWQPEGIAPAALMRAHLPLIERS
Ga0210408_104909271	3300021178	Soil	PSAAFLFAIAGLTVSYLLLAQGAKWAFYRLWRPEGVATPPHLRSHLPLIAGS
Ga0210388_107569051	3300021181	Soil	FLLAIAGLTVSYLLLAQGAKWAFYRLWQPAGFAPAPLMRAHLPLIERS
Ga0213873_102625231	3300021358	Rhizosphere	FGFVPPSAAFLFAIAGLIVSYLLLAQSAKWAFYRVWPPVRGAPAPLMRAHLPLIVRS
Ga0210397_105775701	3300021403	Soil	GAWFGFVPPSAAFLLAIAGLTASYLLLAQGAKWAFYQLWQPAGIAPAPLMRAHLPLIERS
Ga0210384_105184932	3300021432	Soil	LLLAQGAKWAFYRLWQPAGFAPAPLMRAHLPLIERS
Ga0210402_106285822	3300021478	Soil	VAFLFAIAGLTVSYLLLAQGTKWAFYRLWRPVAAAPAPTIRAQLPLIGRS
Ga0242656_10821641	3300022525	Soil	VTYLLLAQGAKWAFYRLWAPVGAAPAPHLRAHLPLIARS
Ga0242654_100351131	3300022726	Soil	AFLFAIAGLTVSYLLLAQGAKWAFYRLWRPEGVATPPHLRSHLPLIAGS
Ga0208820_11264622	3300025576	Peatland	LTVSYLLLAQIAKQAFYRVWPPSVGPPAPLLRAHLPLIGRS
Ga0207693_104314102	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	PSAAFLSAIAGLTVSYLLLAQGAKWAFYRLWPPAGAALAPTIRAQLPLIERS
Ga0207700_118204561	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	FLFAIPGLTVSYLLLAQGAKWAFYRLWQPAGLAPAPLVRAHLPLIERS
Ga0208603_10005636	3300027109	Forest Soil	PSAAFLLAIAGLTASYLLLAQGAKWAFYQLWQPAGIAPAPLMRAHLPLIERS
Ga0209217_10126652	3300027651	Forest Soil	VSYLLLAQGAKWAFYRLWQPAGFAPAPLMRAQLPLI
Ga0209447_100424141	3300027701	Bog Forest Soil	LTVSYLLLAQGAKWAFYRLWQPDGIAPAPLMRAHLPLIERS
Ga0209656_100249711	3300027812	Bog Forest Soil	GFVPPSAAFLLAIAGLTASYLLLAQGAKWAFYRLWQPAGLAPAPLVRAHLPLIERS
Ga0209656_100988834	3300027812	Bog Forest Soil	SATFLFAIAGLTLSYLLLAQGAKSAFYRLWPPIVGPPAPLLRSHLPLTERP
Ga0209656_102354641	3300027812	Bog Forest Soil	ELPAARQGAKWAFYRLWPPAGIAPAPLMRAHLPLIERS
Ga0137415_112513732	3300028536	Vadose Zone Soil	WFGFAPPSAAFLLAIAGLTVSYLLLAQGAKWAFYRLWQPAGFAPAPLMRAHLPLIERS
Ga0302153_103378132	3300028574	Bog	GFVPPSVGFLLAIGGLTVSYLLLAQIAKQAFYRVWPPSVGPPAPLLRAHLPLIGRS
Ga0302202_102263741	3300028762	Bog	LLLAQIAKQAFYRVWPPSVGPPAPLLRAHLPLIGRS
Ga0308309_100263776	3300028906	Soil	LLLAQGAKWAFYRLWRPERVATPPHLRSHLPLIAGS
Ga0308309_115688722	3300028906	Soil	LLAIAGLTASYLLLAQGAKWAFYQLWQPAGIAPAPSMRAHLPLIERS
Ga0073994_119641242	3300030991	Soil	GFVPLSAAFLLAIAGLTVSYLLLAQGAKWAFYRLWQPAGFAPAPLMRAHLPLIERS
Ga0170834_1051580392	3300031057	Forest Soil	GAWFGFVPPSAAFLIAIAGLTVSYLLLAQGAKWAFYRLWQPAGSATPPQLRSHLPLIARS
Ga0170822_107360301	3300031122	Forest Soil	AIAGLTVSYLLLAQGAKWAFYRLWQPAGSATPPQLRSHLPLIARS
Ga0170824_1072394442	3300031231	Forest Soil	WFGFVPPSAAFLLAIAGLTASYLLLAQGAKWAFYQLWQPAGIAPAPSMRAHLPLIERS
Ga0170818_1035422512	3300031474	Forest Soil	AAFLFAIAGLTVSYLLLAQGAKWAFYRLWQPAGIAPAPLVRAQLPLIERS
Ga0170818_1037606791	3300031474	Forest Soil	SAAFLFAIAGLTVSYLLLAQGAKWAFYRLWQPAGIAPAPLMRAHLPLIERS
Ga0170818_1137666953	3300031474	Forest Soil	AWFGFAPPSTAFLLAIAGLTVSYLLLAQGAKWAFYRLWSPVGIALAPHVRSHLPLVERS
Ga0318515_104865223	3300031572	Soil	PSTNFLLAIAGLTVSYLLLAQSAKWAFYHLWQPAGIATPPQLRSHLPLIARS
Ga0307373_102221821	3300031672	Soil	FLLAIAGLTVSYLALAQAAKWAFYRLSQPVGAPTPLIRAQLPLIGRS
Ga0318561_100560681	3300031679	Soil	IVGLTVSYLLLAQSAKWAFYHLWQPAGIATPPQLRSHLPLIARS
Ga0318560_106388782	3300031682	Soil	VCYLLLAQSAKWAFYRLWQPAGIATPPQLRSHLPLIARS
Ga0265342_106929352	3300031712	Rhizosphere	SVGFLLAIAGLTIGYLLLAQIAKQAFYRVWPPSVGPPAPLLRAHLPLIGRS
Ga0318501_102640931	3300031736	Soil	FLLAIAGLTVSYLLLAQGAKSAFYHLWQPAGIATPPQLRSHLPLIARS
Ga0318501_106370622	3300031736	Soil	GLTVSYLLLAQAAKSAFYRLWRPEGVATPPHLRSHLPLIARS
Ga0318494_100629583	3300031751	Soil	SYLLLAQSAKWAFYRLWQPAGIATPPPLRSHLPLIGRS
Ga0307477_101182712	3300031753	Hardwood Forest Soil	VSYLLLAQGAKWAFYRLWQPAGFAPAPLMRAHLPLIERS
Ga0307475_111104572	3300031754	Hardwood Forest Soil	WFGFAPPSATFLLAIAGLTASYLLLAEGAKQAFYRLRSSAGIAPPAQLRPHLPLIDRS
Ga0318526_102636181	3300031769	Soil	YLLLAQSAKWAFYRLWQPAGIATPPPLRSHLPLIGRS
Ga0318498_102174462	3300031778	Soil	TVSYLLLAQSAKWAFYRLWQPAGIATPPPLRSHLPLIGRS
Ga0318547_101436821	3300031781	Soil	LLAQSAKWAFYRLWQPAGFATPPQLRSHLPLIARS
Ga0318547_104714811	3300031781	Soil	PLGAWFGFAPPSTNFLLAIAGLTVSYLLLAQSAKWAFYHLWQPAGIATPPQLRSHLPLIARS
Ga0318550_104726441	3300031797	Soil	AIGGLTVCYLLLAQSAKWAFYRLWQPAGIATPPQLRSHLPLIARS
Ga0310917_110259752	3300031833	Soil	SAGFLLAIAGLVVSYLLLAQSAKWTFYRLWQPAGLATPPQLRSHLPLIARS
Ga0318511_102340411	3300031845	Soil	LTVSYLLLAQATKSAFYRLWRPEGVATPPHLRSHLPLIARS
Ga0306925_113158302	3300031890	Soil	AIAGLTVSYLPLAQAAKSAFYRLWRPEGVATPPHLRSHLPLIARS
Ga0318551_105703661	3300031896	Soil	LTVSYLLLAQGAKWAFYRLWRREGVATPPHLRSHLPLIARS
Ga0318520_101335183	3300031897	Soil	TNFLLAIAGLTVSYLLLAQSAKWAFYHLWQPAGIATPPQLRSHLPLIARS
Ga0310913_100140161	3300031945	Soil	WFGFVPPSAAFLLAIAGLTVSYLLLAQAAKSAFYRLWPPEGVATPPHLRSHLPLIARS
Ga0318530_105017172	3300031959	Soil	AFLLAIAGLTVSYLLLAQSAKWAFYRLWQPAGIAAPPPLRSHLPLIGRS
Ga0318531_102419472	3300031981	Soil	AWFGFAPPSAGFLLAIAGLTVSYLLLAQGAKSAFYHLWQPAGIATPPQLRSHLPLIARS
Ga0306922_102399962	3300032001	Soil	APPSAGFLLAIAGLVVSYLLLAQSAKWTFYRLWQPAGLATPPQLRSHLPLIARS
Ga0318569_100742093	3300032010	Soil	FGFAPPSTDFLLAIAGLTVSYLLLAQSAKWAFYRLWQPAGFATPPQLRSHLPLIARS
Ga0318559_100134325	3300032039	Soil	LLLAQSAKWAFYRLWQPAGFATPPQLRSHLPLIARS
Ga0318559_101429571	3300032039	Soil	FVPPSAAFLLAIAGLTVSYLLLAQSAKWAFYRLWQPAGIATPPPLRSHLPLIGRS
Ga0318532_100460391	3300032051	Soil	FLLAIAGLTVSYLLLAQAAKSAFYRLWPPEGVATPPHLRSHLPLIARS
Ga0318513_103612621	3300032065	Soil	SYLLLAQSAKWAFYRLWQPAGFATPPQLRSHLPLIARS
Ga0310914_103551701	3300033289	Soil	DFLLAIGGLTVCYLLLAQSAKWAFYRLWQPAGIATPPQLRSHLPLIARS
Ga0310914_110045752	3300033289	Soil	FLLAIAGLTVSYLLLAQSAKWAFYRLWQPAGIATPPPLRSHLPLIGRS
Ga0318519_106685423	3300033290	Soil	AGLTVSYLLLAQSAKWAFYHLWQPAGIATPPQLRSHLPLIARS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101238

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences