Metagenome / Metatranscriptome Family F101400

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101400
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	157 residues
Representative Sequence	MRGYDVVTSDDRVVGRVIDVRNGFLIVESGRLRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGESLAHDPAWGSDRDSIAAGRPAPEHRRAEMRKHMRPGFPDEHHSSSTALFGDRRIDSRRVKGD
Number of Associated Samples	78
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	57.84 %
% of genes near scaffold ends (potentially truncated)	51.96 %
% of genes from short scaffolds (< 2000 bps)	85.29 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (9.804 % of family members)
Environment Ontology (ENVO)	Unclassified (40.196 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (66.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.52% β-sheet: 16.93% Coil/Unstructured: 64.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00403	HMA	26.47
PF04542	Sigma70_r2	14.71
PF04107	GCS2	7.84
PF13490	zf-HC2	7.84
PF12804	NTP_transf_3	1.96
PF13180	PDZ_2	1.96
PF08281	Sigma70_r4_2	1.96
PF00188	CAP	0.98
PF04909	Amidohydro_2	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	26.47
COG2608	Copper chaperone CopZ	Inorganic ion transport and metabolism [P]	26.47
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	14.71
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	14.71
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	14.71
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	14.71
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	53.92 %
Unclassified	root	N/A	33.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.94 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	53.92 %
Unclassified	root	N/A	33.33 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.96 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.98 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	50.00 %
Unclassified	root	N/A	33.33 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.98 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.98 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	44.12 %
Unclassified	root	N/A	33.33 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.98 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.98 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	44.12 %
Unclassified	root	N/A	33.33 %
Cronobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Cronobacter	0.98 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.98 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	44.12 %
Unclassified	root	N/A	33.33 %
Cronobacter dublinensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Cronobacter → Cronobacter dublinensis	0.98 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.98 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	44.12 %
Unclassified	root	N/A	33.33 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.98 %
Cronobacter dublinensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Cronobacter → Cronobacter dublinensis	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.98 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	44.12 %
Unclassified	root	N/A	33.33 %
Streptomyces sp. CNR698	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNR698	0.98 %
Cronobacter dublinensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Cronobacter → Cronobacter dublinensis	0.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.98 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.98 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100674814	Not Available	617	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100675304	Not Available	710	Open in IMG/M
3300000956\|JGI10216J12902_111422841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	823	Open in IMG/M
3300004114\|Ga0062593_100011654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4161	Open in IMG/M
3300004156\|Ga0062589_100013493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3540	Open in IMG/M
3300004157\|Ga0062590_102496213	Not Available	547	Open in IMG/M
3300005093\|Ga0062594_100342423	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300005093\|Ga0062594_100556729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	990	Open in IMG/M
3300005093\|Ga0062594_101503585	Not Available	691	Open in IMG/M
3300005329\|Ga0070683_100000868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	22387	Open in IMG/M
3300005329\|Ga0070683_100950337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	825	Open in IMG/M
3300005329\|Ga0070683_101774833	Not Available	593	Open in IMG/M
3300005330\|Ga0070690_101500509	Not Available	544	Open in IMG/M
3300005332\|Ga0066388_100517862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1826	Open in IMG/M
3300005337\|Ga0070682_101817477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Cronobacter → Cronobacter dublinensis	532	Open in IMG/M
3300005338\|Ga0068868_100046584	All Organisms → cellular organisms → Bacteria	3395	Open in IMG/M
3300005344\|Ga0070661_100497870	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300005347\|Ga0070668_100155556	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300005354\|Ga0070675_101301054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	670	Open in IMG/M
3300005354\|Ga0070675_101842308	Not Available	558	Open in IMG/M
3300005355\|Ga0070671_101357131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300005355\|Ga0070671_101967170	Not Available	520	Open in IMG/M
3300005356\|Ga0070674_100778418	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300005436\|Ga0070713_100877228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	862	Open in IMG/M
3300005438\|Ga0070701_10381444	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300005459\|Ga0068867_101638758	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300005526\|Ga0073909_10168898	Not Available	925	Open in IMG/M
3300005529\|Ga0070741_10013921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	14070	Open in IMG/M
3300005529\|Ga0070741_10513395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1082	Open in IMG/M
3300005558\|Ga0066698_10427459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	907	Open in IMG/M
3300005614\|Ga0068856_100119241	All Organisms → cellular organisms → Bacteria	2639	Open in IMG/M
3300005614\|Ga0068856_100216040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1933	Open in IMG/M
3300005618\|Ga0068864_101166574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	768	Open in IMG/M
3300005840\|Ga0068870_10038144	All Organisms → cellular organisms → Bacteria	2480	Open in IMG/M
3300005884\|Ga0075291_1032095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNR698	665	Open in IMG/M
3300005887\|Ga0075292_1006771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1408	Open in IMG/M
3300006237\|Ga0097621_100342794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1327	Open in IMG/M
3300006852\|Ga0075433_10174970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1910	Open in IMG/M
3300006854\|Ga0075425_101081782	Not Available	913	Open in IMG/M
3300006854\|Ga0075425_101342838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	810	Open in IMG/M
3300006854\|Ga0075425_102932657	Not Available	523	Open in IMG/M
3300006871\|Ga0075434_100286030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1668	Open in IMG/M
3300006871\|Ga0075434_100579022	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300006904\|Ga0075424_102251763	Not Available	573	Open in IMG/M
3300009012\|Ga0066710_100648292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1606	Open in IMG/M
3300009098\|Ga0105245_10194195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1946	Open in IMG/M
3300009137\|Ga0066709_101359272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1037	Open in IMG/M
3300009147\|Ga0114129_10827433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1179	Open in IMG/M
3300009148\|Ga0105243_10304154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1447	Open in IMG/M
3300009156\|Ga0111538_11682664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	799	Open in IMG/M
3300009162\|Ga0075423_10733748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1044	Open in IMG/M
3300009176\|Ga0105242_12030510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300009177\|Ga0105248_10774559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1083	Open in IMG/M
3300010043\|Ga0126380_11085058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300010362\|Ga0126377_10212364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1862	Open in IMG/M
3300010373\|Ga0134128_10713781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1113	Open in IMG/M
3300011107\|Ga0151490_1526989	Not Available	717	Open in IMG/M
3300012212\|Ga0150985_106245239	Not Available	553	Open in IMG/M
3300012212\|Ga0150985_109374287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	725	Open in IMG/M
3300012212\|Ga0150985_117535213	Not Available	611	Open in IMG/M
3300012469\|Ga0150984_100110223	Not Available	588	Open in IMG/M
3300012469\|Ga0150984_112595229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	711	Open in IMG/M
3300012469\|Ga0150984_113858445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	859	Open in IMG/M
3300012469\|Ga0150984_121669347	Not Available	510	Open in IMG/M
3300012469\|Ga0150984_123154122	Not Available	508	Open in IMG/M
3300012984\|Ga0164309_10698866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
3300012985\|Ga0164308_10052860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2636	Open in IMG/M
3300012986\|Ga0164304_10148897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1471	Open in IMG/M
3300012989\|Ga0164305_10093793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1907	Open in IMG/M
3300012989\|Ga0164305_11861894	Not Available	545	Open in IMG/M
3300013105\|Ga0157369_10413797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1398	Open in IMG/M
3300013306\|Ga0163162_10191884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2171	Open in IMG/M
3300013307\|Ga0157372_12061251	Not Available	655	Open in IMG/M
3300013308\|Ga0157375_10213906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2085	Open in IMG/M
3300015371\|Ga0132258_10265265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4206	Open in IMG/M
3300015372\|Ga0132256_100465542	Not Available	1372	Open in IMG/M
3300015374\|Ga0132255_100194836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2862	Open in IMG/M
3300017792\|Ga0163161_11712337	Not Available	557	Open in IMG/M
3300019362\|Ga0173479_10112328	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1030	Open in IMG/M
3300020077\|Ga0206351_10719678	Not Available	678	Open in IMG/M
3300020078\|Ga0206352_10548883	Not Available	508	Open in IMG/M
3300020078\|Ga0206352_11240836	Not Available	513	Open in IMG/M
3300022467\|Ga0224712_10261122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	802	Open in IMG/M
3300022467\|Ga0224712_10424959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300023266\|Ga0247789_1048568	Not Available	777	Open in IMG/M
3300024055\|Ga0247794_10208227	Not Available	633	Open in IMG/M
3300025908\|Ga0207643_10036013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2776	Open in IMG/M
3300025911\|Ga0207654_10359346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1004	Open in IMG/M
3300025920\|Ga0207649_10074820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2175	Open in IMG/M
3300025934\|Ga0207686_10185373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1479	Open in IMG/M
3300025935\|Ga0207709_11537659	Not Available	552	Open in IMG/M
3300025944\|Ga0207661_10757382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	894	Open in IMG/M
3300025944\|Ga0207661_11698321	Not Available	577	Open in IMG/M
3300026023\|Ga0207677_10479399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1071	Open in IMG/M
3300026075\|Ga0207708_10819184	Not Available	802	Open in IMG/M
3300026078\|Ga0207702_10093248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2641	Open in IMG/M
3300026078\|Ga0207702_10653119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1034	Open in IMG/M
3300026142\|Ga0207698_12265752	Not Available	555	Open in IMG/M
3300028589\|Ga0247818_11306961	Not Available	521	Open in IMG/M
3300031092\|Ga0308204_10113359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763	Open in IMG/M
3300031092\|Ga0308204_10267092	Not Available	561	Open in IMG/M
3300031854\|Ga0310904_11351934	Not Available	517	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	51.96%
Environmental	Environmental	48.04%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	51.96%
Terrestrial	Environmental → Terrestrial	48.04%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	33.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.65%
Roots	Host-Associated → Plants → Roots	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.75%
Loam	Environmental → Terrestrial → Soil → Loam	10.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.96%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.98%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.88%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	4.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.94%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.96%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020077	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1006748141	3300000364	Soil	MRGFEVVTSDDRLIGHVADMRDGYLIVESGHLRKARHPVPREFVHAVDEAAKAFVTVPRRVVMDAPEVDRKGFFDRRKAARHYGLAESYMAPTTEGRGETLGHDPAWGSERGGAPEHRRAEIRKHLRPGYRDEHRAVSPALLGDRHIERRR
INPhiseqgaiiFebDRAFT_1006753042	3300000364	Soil	MRGFDVVTSDDRLIGHVADMRDGYLIVESGHLRKARHPVPREFVHAVDEAAKAFVTVPRRVVMDAPEVDRKGFFDRRKAARHYGLAESYIAPTTEGRGQTLGHDPAWGSERGGSPEHRRAEIRRHLRPGYRDEYRASSPALLGDRHIDRRRPRTD*
JGI10216J12902_1114228412	3300000956	Soil	VRGYEVVSSDDRVVGTVMGVRDGFLIVESGRLRKSRRPVPREFVHVVDEAAKAFVTVPRRVLTDAPRVDREGNFDRAEAAGHFGLAESYLQPPTGGEGTSLPDPAWGADRDSIAAGRPAPEHPRAETRKHMRPGFPDEHHHSSTALFGDRRIDDRRLRGD*
Ga0062593_1000116545	3300004114	Soil	MRGYDVVTSDDRVVGRVIDVRNGFLIVESGRIRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGESLAHDPAWGSDRDSIAAGRPAPEHRRAEMRKHMRPGFPDEHHSSSTALFGDRRIDSRRVKGD*
Ga0062589_1000134935	3300004156	Soil	MRGYDVVTSDDRVVGRVIDVRNGFLIVESGRIRRSRRPVPREFVHAVDEAAKAFVTVPRRVMMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGESLAHDPAWGSDRDSIAAGRPAPEHRRAEMRKHMRPGFPDEHHSSSTALFGDRRIDSRRVKGD*
Ga0062590_1024962131	3300004157	Soil	MHGYVVVTSDDRSVGHVVDVRNGFLIVESGRVHKSRHPVPREFAHVVDEAAKVFVTLPKRVLMDAPNADKHGDFDRAAAARHFGLAESYLHPPTEGEGASLGHDPPWGSDRDAIAPGRPAPEHRRAEICKHMRPGFPDEHHRRSP
Ga0062594_1003424232	3300005093	Soil	MRGYEVVTSDDRTVGHVADVREGYLIVESGHLRKSRHPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDRKGDFDKSEAARHYGLAEAFADPPAGGLGDTLGHDPAFGSDRGGAPEHRRAEIRKHLRPGYPEAHRSGSPALLGDRHIDQRRVKPD*
Ga0062594_1005567293	3300005093	Soil	IVESGHLHKSRHPVPREFAHVVDEAAKAFVTVPKRVLMDAPRVDKRGGFDRAAAAGHFGLAESYVQAPTEGEGESLGHDPAWGADRDSIAAGRPAPEHRRAEMRKHMRPGYPDEHRPSSTALFGDRRIDSRRVKED*
Ga0062594_1015035851	3300005093	Soil	MRGYDVVTSDDRVVGRVIDVRNGFLIVESGRIRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGESLAHDPAWGADRDSIAAGRPAPEHRRAEMRRHMRPGFPDEHHSSSTALFGDRRIDSRRVKGD*
Ga0070683_10000086813	3300005329	Corn Rhizosphere	MRGYEVVTSDDRVVGQVVDVRDGFLIVESGHLRKSRHPVPREFVHVVDEAAKAFVTVPKRVLMEAPRVDKRAGFDRAAAARHFGLAESYLQPPTEGESESLAHDPAWGADRDSIAAGRPAPEHRRAELRKHMRPGFPDEHHPSPRRSSATGGSTAAASRRTSRD*
Ga0070683_1009503372	3300005329	Corn Rhizosphere	MRGYDVVTSDDRVVGRVIDVRNGFLIVESGRIRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGESLAHDPAWGSDRDSIAAGRPAPEHRRAEMRKHMRPGFPDEHH
Ga0070683_1017748331	3300005329	Corn Rhizosphere	MRGYQVVTSDDRAVGHVSDVRDGYLIVESGWLRKARHPVPREFVHAVDEAAKAFVTVPRRVLMDAPEVDRKGNFDRREAARHFGLAELYRQPPTSGPGDSLGHDPAWGPDLGEGAPEHRRAEIRKHLRPGYPDEHRASSPALLGDRHIDQRRVKGT*
Ga0070690_1015005091	3300005330	Switchgrass Rhizosphere	MRGYEVVTSDDRVVGHVVDVRDGFLIVESGHLHKSRHPVPREFAHVVDEAAKAFVTVPKRVLMDAPRVDKRGGFDRAAAAGHFGLAESYVQAPTEGEGESLGHDPAWGADRDSIAAGRPAPEHRRAELRKHMRPGFPDEHHPSPRRSSATGGSTAAASRRTSRD*
Ga0066388_1005178622	3300005332	Tropical Forest Soil	MRGYEVVTSDDRAVGRVVDVRNGFLIVESGRLRKTRRPVPREFVHVVDEAAKAFVTVPKRVLTDAPHVDERGGFDQAAAARHFGLAESSLQPPTEGESRAHDPTWGADRDSIAAGRPAPEHRRAEMRKHMRPGFSEEHHSSSTALFGDRRITGRRLKED*
Ga0070682_1018174771	3300005337	Corn Rhizosphere	MRGYEVVTSDDRVVGQVVDVRDGFLIVESGHLRKSRHPVPREFVHVVDEAAKAFVTVPKRVLMEAPRVDKRAGFDRAAAARHFGLAESYLQPPTEGESESLAHDPAWGADRDSIAAGRPAPEHRRAELRKHMRPGFPDEHH
Ga0068868_1000465842	3300005338	Miscanthus Rhizosphere	MRGYEVVTIRKPSRTSRHPVPREFVHVVDEAAKAFVTVPKRVLMEAPRVDKRAGFDRAAAARHFGLAESYLQPPTEGESESLAHDPAWGADRDSIAAGRPAPEHRRAELRKHMRPGFPDEHHPSPRRSSATGGSTAAASRRTSRD*
Ga0070661_1004978701	3300005344	Corn Rhizosphere	HLRKSRHPVPREFVHVVDEAAKAFVTVPKRVLMEAPRVDKRAGFDRAAAARHFGLAESYLQPPTEGESESLAHDPAWGADRDSIAAGRPAPEHRRAELRKHMRPGFPDEHHPSSTALFGDRRIDSRRVKED*
Ga0070668_1001555563	3300005347	Switchgrass Rhizosphere	MRGYDVVTSDDRVVGRVIDVRNGFLIVESGRIRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGDSLAHDPAWGADRDSIAAGRPAPEHRRAEMRKHMRPGFPDEHHSSSTALFGDRRIDSRRVKGD*
Ga0070675_1013010542	3300005354	Miscanthus Rhizosphere	RGVAPETADRKEAGMRGYEVVTSDDRVVGQVVDVRDGFLIVESGHLRKSRHPVPREFVHVVDEAAKAFVTVPKRVLMEAPRVDKRAGFDRAAAARHFGLAESYLQPPTEGESESLAHDPAWGADRDSIAAGRPAPEHRRAELRKHMRPGFPDEHHPSPRRSSATGGSTAAASRRTSRD*
Ga0070675_1018423081	3300005354	Miscanthus Rhizosphere	NGFLIVESGRIRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGESLAHDPAWGSDRDSIAAGRPAPEHRRAEMRKHMRPGFPDEHHSSSTALFGDRRIDSRRVKGD*
Ga0070671_1013571312	3300005355	Switchgrass Rhizosphere	FLIVESGHLHKSRHPVPREFAHVVDEAAKAFVTVPKRVLMDAPRVDKRGGFDRAAAAGHFGLAESYVQAPTEGEGESLGHDPAWGADRDSIAAGRPAPEHRRAEMRKHMRPGYPDEHRPSSTALFGDRRIDSRRVKED*
Ga0070671_1019671701	3300005355	Switchgrass Rhizosphere	VRGFEVVTSDDRMIGHVADVQEGYLIVESGHLRKARHPVPREFVHAVDEAAKAFVTVPRRVVMDAPEVDRKGFFDRRQAARHYGLAESYVAPTTEGRGDTLGHDPAWGSERGGTAEHRRAEIRKHLRPGYQEEHRASSPALLGDRHIDRRRIDTDH*
Ga0070674_1007784181	3300005356	Miscanthus Rhizosphere	ESGHLRKSRHPVPREFVHVVDEAAKAFVTVPKRVLMEAPRVDKRAGFDRAAAARHFGLAESYLQPPTEGESESLAHDPAWGADRDSIAAGRPAPEHRRAELRKHMRPGFPDEHHPSPRRSSATGGSTAAASRRTSRD*
Ga0070713_1008772283	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	GQVVDVRDGFLIVESGHLRKSRHAVPREFVHVVDEAAKAFATVPKRVLMEAPRVDKRAGFDRAAAARHFGLAESYLQPPTEGEGESLAHDPAWGADRDSIAAGRPAPEHRRAELRKHMRPGFPDEHHPSSTALFGDRRIDSRRVKED*
Ga0070701_103814441	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	HVADVQEGYLIVESGHLRKARHPVPREFVHAVDEAAKAFVTVPKRVLMEAPRVDKRAGFDRAAAARHFGLAESYLQPPTEGESESLAHDPAWGADRDSIAAGRPAPEHRRAELRKHMRPGFPDEHHPSPRRSSATGGSTAAASRRTSRD*
Ga0068867_1016387581	3300005459	Miscanthus Rhizosphere	IVESGHLRKSRHPVPREFVHVVDEAAKAFVTVPKRVLMEAPRVDKRAGFDRAAAARHFGLAESYLQPPTEGESESLAHDPAWGADRDSIAAGRPAPEHRRAELRKHMRPGFPDEHHPSPRRSSATGGSTAAASRRTSRD*
Ga0073909_101688981	3300005526	Surface Soil	MRGYDVVTSDDRVVGRVIDVRNGFLIVESGRLRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGDSLAHDPAWGSDRDSIAAGRPAPEHRRAETRKHMRPGFPDEHHSSSTALFGDRRIDSRRVKED*
Ga0070741_1001392111	3300005529	Surface Soil	MRGYAVMTSDDRDVGQVVDVRNGFLIVESGHLHKSRHPVPREFVHVVDEAAKAFVTIPRRLLFDAPRADKRGNFDREAAARHFGLGESYLQPTEGEGGPAAEHRRAELRKRLRPGYSDEHRHPSTALFGDRRIHDRRVKEG*
Ga0070741_105133952	3300005529	Surface Soil	MRGYEVVTSDDRAVGHVVDVRDGYLIVESGRWLKTRRPVPREFVHIVDEAAKAFVTVPRRVLLDAPEVDRRGQFDHRRAAFHFGLAEDFAEPPAGGGGESLPHDPAWGPEHDSRAARRDASEHRRAEIRKHLRPGYPDEHRHPSPALFGDRRISTRRAKTED*
Ga0066698_104274592	3300005558	Soil	VRGYDVVTSDDRIVGRVMDVRHGFLIVESGRLRKSRHPVPREFVHVVDEAAKAFVTVPRRILMDAPKADKNGGFDRAAAARHFGLAESYLQPSTAGEGESPPHDPAWGADRDSIAAGRHAPEHRRAEMRKHM
Ga0068856_1001192412	3300005614	Corn Rhizosphere	MRGYEVVTSDDRVVGHVVDVRDGFLIVESGHLHKSRHPVPREFAHVVDEAAKAFVTVPKRVLMDAPRVDKRGGFDRAAAAGHFGLAESYVQAPTEGEGESLGHDPAWGADRDSIAAGRPAPEHRRAEMRKHMRPGYPDEHRPSSTALFGDRRIDSRRVKED*
Ga0068856_1002160401	3300005614	Corn Rhizosphere	MRGYDVVTSDDRVVGRVIDVRNGFLIVESGRIRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGESLAHDPAWGADRDSIAAGRPAPEHRRAEMRKHMRPGFPDEHHSSSTALFGDRRIDSRRVKGD*
Ga0068864_1011665741	3300005618	Switchgrass Rhizosphere	MRGYDVVTSDDRVVGRVIDVRNGFLIVESGRIRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKEGKFDRAAAAAHFGLAESYLQPPTEGEGESLAHDPAWGADRDSIAAGRPAPEHRRAEMRRHMR
Ga0068870_100381442	3300005840	Miscanthus Rhizosphere	MRGYEVVTSDDRVVGQVVDVRDGFLIVESGHLRKSRHPVPREFVHVVDEAAKAFVTVPKRVLMEAPRVDKRAGFDRAAAARHFGLAESYLQPPTEGEGESLAHDPAWGADRDSIAAGRPAPEHRRAELRKHMRPGFPDEHHPSPRRSSATGGSTAAASRRTSRD*
Ga0075291_10320951	3300005884	Rice Paddy Soil	SSHPSSGFHDAPTRSPPGLFPLGIARAWVSTRHLSEEETVRGYEVVTSDKRTVGRVVDVKDGYLIVESGRLRRSRRPIPREFVHAVDEAEMVFVTVPMRVLHDAPRVDRESRFDRNEAAWHYGLAETYAQPPKDGGGTSLPHDPAWGSDRDAFAAGRQPSEHRRAEIRKHMRPGEPSEHDHSHRSPALFGDRRWQERRVRED*
Ga0075292_10067712	3300005887	Rice Paddy Soil	VRGYEVVTSDKRTVGRVVDVKDGYLIVESGRLRRSRRPIPREFVHAVDEAEMVFVTVPMRVLHDAPRVDRESRFDRNEAAWHYGLAETYAQPPKDGGGTSLPHDPAWGSDRDAFAAGRQPSEHRRAEIRKHMRPGEPSEHDHSHRSPALFGDRRWQERRVRED*
Ga0097621_1003427943	3300006237	Miscanthus Rhizosphere	MRGYEVVTSDDRVVGQVVDVRDGFLIVESGHLHKSRHPVPREFAHVVDEAAKAFVTVPKRVLMDAPRVDKRGGFDRAAAAGHFGLAESYVQAPTEGEGESLGHDPAWGADRDSIAAGRPAPEHRRAEMRKHMRPGYPDEHRPSSTALFGDRRIDSRRVKED*
Ga0075433_101749703	3300006852	Populus Rhizosphere	VRGFEVVTSDDRVVGTVMDVRHGFLIVESGRLRKSRHPVPREFVHVVDEAAKAFVTVPRRILMDAPRVDKDGEFDRSAAARHFGLAESHLQPPTAGEGESLPHDPAWSADRDSIAAGRPAAEHRRAEMRKHMRPGYPDEHHHSSTALFGDRRFDDRRVRND*
Ga0075425_1010817823	3300006854	Populus Rhizosphere	MRGYDVVTSDDRVVGRVIDVRNGFLIVESGRLRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGESFAHDPAWGSDRDSIAAGRPAPEHRRAEMRRHMRPGFPDEHHSSSTALFGDRRMDSRRVKGD*
Ga0075425_1013428382	3300006854	Populus Rhizosphere	MRGYEVVTSDDRVVGQVVDVRDGFLIVESGHLRKSRHPVPREFVHVVDEAAKAFVTVPKRVLMEAPRVDKRAGFDRAAAARHFGLAESYLQPPTEGEGESLAHDPAWGADRDSIAAGRPAPEHRRAELRKHMRPGFPDEHH
Ga0075425_1029326571	3300006854	Populus Rhizosphere	ELEEASVRGFEVVTSDDRVVGTVMDVRHGFLIVESGRLRKSRHPVPREFVHVVDEAAKAFVTVPRRILMDAPKADKDGEFDRSAAARHFGLAESYLQPPTARDGESLPNDPAWSVERDSVAAGRPAAEHRRAEMRKHMRPGYPDEHHHSSTALFGDRRFDDRRVRND*
Ga0075434_1002860303	3300006871	Populus Rhizosphere	VRGYEVVTSEDRVVGTVVDVRHGFLIVESGRLRKSRHPVPREFVHVVDEAAKAFVTVPRRILMDAPRVDKDGEFDRSAAARHFGLAESHLQPPTAGEGESLPHDPAWSADRDSIAAGRPAAEHRRAEMRKHMRPGYPDEHHHSSTALFGDRRFDDRRVRND*
Ga0075434_1005790223	3300006871	Populus Rhizosphere	MRGYDVVTSDDRVVGRVIDVRNGFLIVESGRLRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGESLAHDPAWGSDRDSIAAGRPAPEHRRAEMRKHMRPGFPDEHHSSSTALFGDRRIDSRRVKGD*
Ga0075424_1022517631	3300006904	Populus Rhizosphere	GYEVVTSDDRVVGHVVDVRDGFLIVETGHLHKSRHPVPREFVHVVDEAAKAFVTVPKRVLMDAPRVDKKGAFDRAAAARHFGLAESYLQPPTEGEGESVAHDPAWGADRDSIAAGRPAPEHRRAEMRKHMRPGFPDEHRPSSTALFGDRRIDSRRVRED*
Ga0066710_1006482923	3300009012	Grasslands Soil	VRGYEVITSDKRRVGRVVDVSNGYLVVESGSILRSRRPIPREFAHAVDEAETVFVTVPRRVLQDAPKVDRRGRFDGREAARHFGLAESYAQAPTEGLGESLPHDPAWGAERDAIAAGRQPSEHRRAEIRKHMRPGELSERDGARRSPALFGDRRWAERRVSEE
Ga0105245_101941953	3300009098	Miscanthus Rhizosphere	VTSDDRMIGHVADVQEGYLIVESGHLRKARHPVPREFVHAVDEAAKAFVTVPRRVVMDAPEVDRKGHFDRRQAARHYGLAESYVAPTTEGRGDTLGHDPAWGSERGGAAEHRRAEIRKHLRPGYQEEHRASSPALLGDRHIDRRRIDTDH*
Ga0066709_1013592721	3300009137	Grasslands Soil	VITSDKRRVGRVVDVSNGYLVVESGSILRSRRPIPREFAHAVDEAETVFVTVPRRVLQDAPKVDRRGRFDGREAARHFGLAESYAQAPTEGLGESLPHDPAWGAERDAIAAGRQPSEHRRAEIRKHMRPGELSERDGARRSPALFGDRRWAERRVSEE*
Ga0114129_108274332	3300009147	Populus Rhizosphere	VRGFEVVTSDDRVVGTVMDVRHGFLIVESGRLRKSRHPVPREFVHVVDEAAKAFVTVPRRILMDAPKADKDGEFDRSAAARHFGLAESYLQPPTAGDGESLPNDPAWSVERDSVAAGRPAAEHRRAEMRKHMRPGYPDEHHHSSTALFGDRRFDDRRVRND*
Ga0105243_103041543	3300009148	Miscanthus Rhizosphere	GYDVVTSDDRVVGRVIDVRNGFLIVESGRIRRSRRPVPREFVHAVDEAAKAFVTVPRRVMMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGESLAHDPAWGADRDSIAAGRPAPEHRRAEMRKHMRPGFPDEHHSSSTALFGDRRIDSRRVKGD*
Ga0111538_116826641	3300009156	Populus Rhizosphere	MRGYDVVTSDDRVVGRVIDVRNGFLIVESGRIRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGDSLAHDPAWGADRDSIAAGRPAPEHRRAEMRRHMRPGFPDEHHSSSTALFGDRRMDSRRVKGD*
Ga0075423_107337481	3300009162	Populus Rhizosphere	MRGYDVVTSDDRVVGRVIDVRNGFLIVESGRIRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGESFAHDPAWGADRDSIAAGRPAPEHRRAEMRRHMRPGFPDEHHSSSTTLFGDRRMDSRRVKGD*
Ga0105242_120305102	3300009176	Miscanthus Rhizosphere	MRGYEVVTSDDRVVGQVVDVRDGFLIVESGHLRKSRHPVPREFVHVVDEAAKAFVTVPKRVLMEAPRVDKRAGFDRAAAARHFGLAESYLQPPTEGESESLAHDPAWGADRDSIAAGRPAPEHRRAELRKH
Ga0105248_107745591	3300009177	Switchgrass Rhizosphere	MRGYEVVTSDDRVVGHVVDVRDGFLIVESGHLHKSRHPVPREFAHVVDEAAKAVVTVPKRVLMDAPRVDKRGGFDRAAAAGHFGLAESYLQPPTEGESESLAHDPAWGADRDSIAAGRPAPEHRRAELRKHMRPG
Ga0126380_110850581	3300010043	Tropical Forest Soil	VRHGFLIVESGRLRKSRHPVPREFVHVVDEAAKAFVTVPRRILMDAPKVAKSGDFERAAAARHFGLAESDLQPPTAAEGESLPHDPAWGADGDSIRTRRPAPDERRADIRKYMRPSFPDQHHRSSTALFGDRRVDDRPSRE*
Ga0126377_102123643	3300010362	Tropical Forest Soil	MRGYEVVTSDDRVVGQVVDVRDGFLIVESGHLRKSRHPVPREFVHVVDEAAKAFVTVPKRVLMDAPPVDKEGQFDRAAAARHFGLAESYLEPPTAGKGESLAHDPAWGADRDSIAAGRPAPEHRRAEMRKHMRPGFPGEHYASSTALFGDRRIDSRRIKDD*
Ga0134128_107137811	3300010373	Terrestrial Soil	MRGYEVVTSDDRVVGQVVDVRDGFLIVESGHLRKSRHPVPREFVHVVDEAAKAFVTVPKRVLMEAPRVDKRAGFDRAAAARHFGLAESYLQPPTEGESESLAHDPAWGADRDSIAAGRPAPEHRRAELRKHMRPGFPDEHHPSSTALFGDRRIDSRRVKED*
Ga0151490_15269891	3300011107	Soil	VDRFGLDVGRFVALGFLDRTVRGVRDDRVVGRVVDVRNGFLIVESGRLHKSRHPVPREFVHAVDEAAKAFVTVPRRVLMDAPRVDKHGHFDQASAAAHFGLAESYLQPPTEGEGESLAHDPAWGADRDSIAAGRPAPEHRRAEQRKHMRPGFPDEHHATSPALLGDRRIGLRRVRND*
Ga0150985_1062452391	3300012212	Avena Fatua Rhizosphere	GGGRMRGFEVVTSDDRMIGHVADVRDGYLIVESGHVRKARHPVPREFVHAVDQAAKAFVTVPRRVVMDAPAVDRKGFFDRREAARHYGLAESYIAPTTEGRGETLGHDPEWGSQQRSGSSEQRRAEIRKHLRPGYQEEHRQGSPALRGDRHIDRRRVKSD*
Ga0150985_1093742871	3300012212	Avena Fatua Rhizosphere	EGRMRGYEVVTSDDKVVGHVADVRDGYLIVESGHMRKTRHPVPREFVHAVDEAAKAFVTVPRRVLMDAPEVDRKGFFDRRAAAGHYGLAESYVSPVTEGRGESLGHDPAWGSDQGAGSEHRRAEIRKQMRPGYQEEHRQGSPALLGDRHIDRRRVNTD*
Ga0150985_1175352131	3300012212	Avena Fatua Rhizosphere	MRGYEVVTSDDKVVGHVADVRDGYLIVESGHMRKTRHPVPREFVHAVDEAAKAFVTVPRRVLMDAPEVDRKGFFDRRAAARHFGLAESYVSPVTEGRGETLGHDPAWGSEKGAGSEHKRAEIRKHLRPGYQEAHRQGSPALLGDRHIDQRRVNTD*
Ga0150984_1001102232	3300012469	Avena Fatua Rhizosphere	EAAMTGFEVVTSDDRVVGHVTDVRDGYLIVESGHVRKTRHPVPREFVHVVEEAAKAFVTVPRRVVMDAPEVDRKGFFDRREAARHYGLAESYIAPTTQGRGDTLGHDPEWGSQQSGAPEHRRAEIRKHLRPGYQEEHRAHSPALLGDRHVDSRRAKTD*
Ga0150984_1125952291	3300012469	Avena Fatua Rhizosphere	MRGFEVVTSDDRMIGHVADVRDGYLIVESGHVRKARHPVPREFVHAVDQAAKAFVTVPRRVVMDAPAVDRKGFFDRREAARHYGLAESYIAPTTEGRGETLGHDPEWGSQQGSGSSEQRRAEIRKHLRPGYQEEHRQGSPALLGDRHIDRRRVQSD*
Ga0150984_1138584453	3300012469	Avena Fatua Rhizosphere	DLEGRMRGYEVVTSDDKVVGHVADVRDGYLIVESGHMRKTRHPVPREFVHAVDEAAKAFVTVPRRVLMDAPEVDRKGFFDRRAAAGHYGLAESYVSPVTEGRGESLGHDPAWGSDQGAGSEHRRAEIRKQMRPGYQEEHRQGSPALLGDRHIDRRRVNTD*
Ga0150984_1216693471	3300012469	Avena Fatua Rhizosphere	EGRMRGYEVVTSDDKVVGHVADVREGYLIVESGHMRKSRHPVPREFVHAVDEAAKAFVTVPRRVLMDAPEVDRKGFFDRREAARHYGLAESYVSPVTEGRGETLGHDPAWGSDQGAASEHKRAEIRKHLRPGYQEEHRQGSPALLGDRHIDRRRVDTD*
Ga0150984_1231541221	3300012469	Avena Fatua Rhizosphere	GQSMRGYEVVTSDDKVVGHVADVRDGYLIVESGHVRKSRHPVPREFVHAVDEAAKAFVTVPRRVLMDAPEVDRKGYFDRREAARHFGLAESYVSPVTEGRGESLGHDPAWGSDKGAGSEHKRAEIRKHLRPGYQEEHRQGSPALLGDRHIDRRRVDTD*
Ga0164309_106988661	3300012984	Soil	DSARKEARMRGYEVVTSDDRVVGHVVDVRDGFLIVESGHLHKSRHPVPREFAHVVDEAAKAFVTVPKRVLMDAPRVDKRGGFDRAAAAGHFGLAESYVQAPTEGEGESLGHDPAWGADRDSIAAGRPAPEHRRAEMRKHMRPGYPDEHRPSSTALFGDRRIDSRRVKED*
Ga0164308_100528603	3300012985	Soil	MRGYEVVTSDDRVVGHVVDVRDGFLIVDSGHLHKSQHPVPREFVHVVDEAAKAFVTVPKRVLMDAPRVDKRGGFDRAAAAGHFGLAESYVQAPTEGEGESLGHDPAWGADRDSIAAGRPAPEHRRAEMRKHMRPGYPDEHRPSSTALFGDRRIDSRRVKED*
Ga0164304_101488971	3300012986	Soil	MRGYEVVTSDDRVVGHVVDVRDGFLIVESGHLHKSRHPVPREFAHVVDEAAKAFVTVPKRVLMDAPRVDKRGGFDRAAAAGHFGLAESYVQAPTEGEGESLGHDPAWGADRDSIAAGRPAPEHRRAEMRKHMRPGYPDEHRPSST
Ga0164305_100937934	3300012989	Soil	MRGYEVVTSDDRVVGHVVDVRDGFLIVESGHLHKSQHPVPREFAHVVDEAAKAFVTVPKRVLMDAPRVDKRGGFDRAAAAGHFGLAESYVQAPTEGEGESLGHDPAWGADRDSIAAGRPAPEHRRAEMRKHMRPGYPDEHRPSSTALFGDRRIDSRRVKED*
Ga0164305_118618941	3300012989	Soil	RGFEVVTSDDRLIGHVADMRDGYLIVESGHLRKARHPVPREFVHAVDEAAKAFVTVPRRVVMDAPDVDRKGFFDRRKAARHYGLAESYMAPTTEGRGETLGHDPAWGSERGGAPEHRRAEIRKHLRPGYRDEHRAVSPALLGDRHIDRRRPRTD*
Ga0157369_104137971	3300013105	Corn Rhizosphere	DRKEAGMRGYEVVTSDDRVVGQVVDVRDGFLIVESGHLRKSRHPVPREFVHVVDEAAKAFVTVPKRVLMEAPRVDKRAGFDRAAAARHFGLAESYLQPPTEGESESLAHDPAWGADRDSIAAGRPAPEHRRAELRKHMRPGFPDEHHPSPRRSSATGGSTAAASRRTSRD*
Ga0163162_101918844	3300013306	Switchgrass Rhizosphere	MRGYDVVTSDDRVVGRVIDVRNGFLIVESGRIRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGESLAHDPAWGSDRDSIAAGRPAPEHRRAEMRRHMRPGFPDEHHSSSTALFGDRRIDSRRVKGD*
Ga0157372_120612511	3300013307	Corn Rhizosphere	MRGYEVVTSDDRVVGHVVDVRDGFLIVESGHLHKSRHPVPREFAHVVDEAAKAFVTVPKRVLMDAPRVDKRGGFDRAAAAGHFGLAESYVQAPTEGEGESLGHDPAWGADRDSIAAGRPAPEHRRAEMRKHMRPGYPDEHRPSSTALFGDRRIDS
Ga0157375_102139063	3300013308	Miscanthus Rhizosphere	MRGYDVVTSDDRVVGRVIDVRNGFLIVESGRIRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAEAYLQPPTEGEGESLAHDPAWGSDRDSIAAGRPAPEHRRAEMRRHMRPGFPDEHHSSSTALFGDRRIDSRRVKGD*
Ga0132258_102652655	3300015371	Arabidopsis Rhizosphere	MRGYDVVTSDDRVVGRVIDVRNGFLIVESGRLRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGESFAHDPAWGSDRDSIAAGRPAPEHRRAETRKHMRPGFPDEHHSSSTALFGDRRIDSRRVKED*
Ga0132256_1004655422	3300015372	Arabidopsis Rhizosphere	MRGYDVATSDDRVVGRVIDVRNGFLIVESGRLRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGESLAHDPAWGSDRDSIAAGRPAPEHRRAEPRKHMRPGFPDEHHSSSTALFGDRRIDSRRVKED*
Ga0132255_1001948363	3300015374	Arabidopsis Rhizosphere	MRGYDVATSDDRVVGRVIDVRNGFLIVESGRLRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGESFAHDPAWGSDRDSIAAGRPAPEHRRAETRKHMRPGFPDEHHSSSTALFGDRRIDSRRVKED*
Ga0163161_117123371	3300017792	Switchgrass Rhizosphere	PEQATGRRRVMRGYDVVTSDDRVVGRVIDVRNGFLIVESGRIRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGESLAHDPAWGSDRDSIAAGRPAPEHRRAEMRKHMRPGFPDEHHSSSTALFGDRRIDSRRVKGD
Ga0173479_101123281	3300019362	Soil	MRGFEVVTSDDRMIGHVADVRDGYLIVESGHIRKARHPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDRKGDFDKSEAARHYGLAEAFADPPAGGLGDTLGHDPAFGSDRGGAPEHRRAEIRKHLRPGYPEAHRSGSPALLGDRHIDQRRVKPD
Ga0206351_107196782	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	MRGYEVVTSDDRVVGHVVDVRDGFLIVESGHLHKSRHPVPREFAHVVDEAAKAFVTVPKRVLMDAPRVDKRGGFDRAAAAGHFGLAESYVQAPTEGEGESLGHDPAWGADRDSIAAGRPAPEHRRAELRKHMRPGFPDEHHPSPRRSSATGGSTAAASRRTSRD
Ga0206352_105488831	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	GRRRVMRGYDVVTSDDRVVGRVIDVRNGFLIVESGRIRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGESLAHDPAWGSDRDSIAAGRPAPEHRRAEMRKHMRPGFPDEHHSSSTALFGDRRIDSRRVKGD
Ga0206352_112408361	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MRGYEVVTSDDRVVGQVVDVRDGFLIVESGHLRKSRHPVPREFVHVVDEAAKAFVTVPKRVLMEAPRVDKRAGFDRAAAARHFGLAESYLQPPTEGESESLAHDPAWGADRDSIAAGRPAPEHRRAELRKHMRPGFPDEHHPSPRRSSATGESTAAASRRTSRD
Ga0224712_102611221	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	EAGMRGYEVVTSDDRVVGQVVDVRDGFLIVESGHLRKSRHPVPREFVHVVDEAAKAFVTVPKRVLMEAPRVDKRAGFDRAAAARHFGLAESYLQPPTEGESESLAHDPAWGADRDSIAAGRPAPEHRRAELRKHMRPGFPDEHHPSPRRSSATGGSTAAASRRTSRD
Ga0224712_104249592	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	AGMRGYEVVTSDDRVVGHVVDVRDGFLIVESGHLHKSRHPVPREFAHVVDEAAKAFVTVPKRVLMDAPRVDKRGGFDRAAAAGHFGLAESYVQAPTEGEGESLGHDPAWGADRDSIAAGRPAPEHRRAEMRKHMRPGYPDEHRPSSTALFGDRRIDSRRVKED
Ga0247789_10485682	3300023266	Soil	MRGYDVVTSDDRVVGRVIDVRNGFLIVESGRIRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGESLAHDPAWGSDRDSIAAGRPAPEHRRAEMRKHMRPGFPDEHHSSSTALFGDRRIDSRRVKGD
Ga0247794_102082271	3300024055	Soil	VESGRIRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGESLAHDPAWGSDRDSIAAGRPAPEHRRAEMRKHMRPGFPDEHHSSSTALFGDRRIDSRRVKGD
Ga0207643_100360132	3300025908	Miscanthus Rhizosphere	MRGYEVVTSDDRVVGQVVDVRDGFLIVESGHLRKSRHPVPREFVHVVDEAAKAFVTVPKRVLMEAPRVDKRAGFDRAAAARHFGLAESYLQPPTEGEGESLAHDPAWGADRDSIAAGRPAPEHRRAELRKHMRPGFPDEHHPSPRRSSATGGSTAAASRRTSRD
Ga0207654_103593461	3300025911	Corn Rhizosphere	MRGYEVVTSDDRVVGQVVDVRDGFLIVESGHLRKSRHPVPREFVHVVDEAAKAFVTVPKRVLMEAPRVDKRAGFDRAAAARHFGLAESYLQPPTEGESESLAHDPAWGADRDSIAAGRPAPEHRRAELRKHMRPGFPDEHHPSPRRSSATGGSTAAASRRTSRD
Ga0207649_100748202	3300025920	Corn Rhizosphere	MRGYEVVTSDDRVVGQVVDVRDGFLIVESGHLRKSRHPVPREFVHVVDEAAKAFVTVPKRVLMEAPRVDKRAGFDRAAAARHFGLAESYLQPPTEGESESLAHDPAWGADRDSIAAGRPAPEHRRAELRKHMRPGFPDEHHPSSTALFGDRRIDSRRVKED
Ga0207686_101853731	3300025934	Miscanthus Rhizosphere	MRGYEVVTSDDRVVGQVVDVRDGFLIVESGHLRKSRHPVPREFVHVVDEAAKAFVTVPKRVLMEAPRVDKRAGFDRAAAARHFGLAESYLQPPTEGESESLAHDPAWGADRDSIAAGRPAPEHRRAELRKHMRP
Ga0207709_115376591	3300025935	Miscanthus Rhizosphere	TGRRRVMRGYDVVTSDDRVVGRVIDVRNGFLIVESGRIRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGESLAHDPAWGADRDSIAAGRPAPEHRRAEMRRHMRPGFPDEHHSSSTALFGDRRIDSRRVKGD
Ga0207661_107573821	3300025944	Corn Rhizosphere	MRGYDVVTSDDRVVGRVIDVRNGFLIVESGRIRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGESLAHDPAWGSDRDSIAAGRPAPEHRRAEMRKHMRPGFPDEHHSSS
Ga0207661_116983211	3300025944	Corn Rhizosphere	MRGYQVVTSDDRAVGHVSDVRDGYLIVESGWLRKARHPVPREFVHAVDEAAKAFVTVPRRVLMDAPEVDRKGNFDRREAARHFGLAELYRQPPTSGPGDSLGHDPAWGPDLGEGAPEHRRAEIRKHLRPGYPDEHRASSPALLGDRHIDQRRVKGT
Ga0207677_104793991	3300026023	Miscanthus Rhizosphere	VVGQVVDVRDGFLIVESGHLRKSRHPVPREFVHVVDEAAKAFVTVPKRVLMEAPRVDKRAGFDRAAAARHFGLAESYLQPPTEGESESLAHDPAWGADRDSIAAGRPAPEHRRAELRKHMRPGFPDEHHPSPRRSSATGGSTAAASRRTSRD
Ga0207708_108191841	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	GRIRRSRRPVPREFGHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGESLAHDPAWGSDRDSIAAGRPAPEHRRAEMRKHMRPGFPDEHHSSSTALFGDRRIDSRRVKGD
Ga0207702_100932482	3300026078	Corn Rhizosphere	MRGYEVVTSDDRVVGHVVDVRDGFLIVESGHLHKSRHPVPREFAHVVDEAAKAFVTVPKRVLMDAPRVDKRGGFDRAAAAGHFGLAESYVQAPTEGEGESLGHDPAWGADRDSIAAGRPAPEHRRAEMRKHMRPGYPDEHRPSSTALFGDRRIDSRRVKED
Ga0207702_106531192	3300026078	Corn Rhizosphere	MRGYDVVTSDDRVVGRVIDVRNGFLIVESGRIRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGESLAHDPAWGADRDSIAAGRPAPEHRRAEMRRHMRPGFPDEHHSSSTALFGDRRIDSRRVKGD
Ga0207698_122657521	3300026142	Corn Rhizosphere	EVVTSDDRMIGHVADVQEGYLIVESGHLRKARHPVPREFVHAVDEAAKAFVTVPKRVLMEAPRVDKRAGFDRAAAARHFGLAESYLQPPTEGESESLAHDPAWGADRDSIAAGRPAPEHRRAELRKHMRPGFPDEHHPSPRRSSATGGSTAAASRRTSRARPRPGESRHGRASPGSPRGRCGRR
Ga0247818_113069611	3300028589	Soil	MRGYEVVTSDDRTVGHVADVREGYLIVESGHLRKSRHPVPREFVHAVDEAAKAFVTVPRRVLMDAPEVDRNGDFDKSEAARHYGLAEAFADPPAGGLGDTLGHDPAFGSDRGGAPEHRRAEIRKHLRPGYPEAHRSGSPALLGDRHIDQRRVKPD
Ga0308204_101133591	3300031092	Soil	EPVRGYEVVASDERRMGHVVDVRDGYLIVESGWLRKRRRPVPREFVHVVDEAAKAFVTVPRRVLREAPHVDRRGNFDISEAARHYGLTAAHAQAPTEGLGESLPHDPAYGADRDSIPAEEPVEHRRAEIRKAMRPGLGEHHDPGNPALFGDRRAEAPRVKRN
Ga0308204_102670921	3300031092	Soil	ARMRGYEVVTTDDRVVGEVVDVRDGFLIVESGHVHKSRHPVPREFVHAVDEAAKAFVTVPKSLLMDAPKVDRRGNFDRAAAARHFGLAEACLQPPTEGEGESLGHDPAWGPDRDSIAAGRPAPEHRRAEIRKDMQPGSRTSSIAARPHCSGTDRIDSRWTLKSY
Ga0310904_113519341	3300031854	Soil	VRGGVSQGRTEAGDRKEAGMRGYDVVTSDDRVVGRVIDVRNGFLIVESGRLRRSRRPVPREFVHAVDEAAKAFVTVPRRVLMDAPKVDKQGKFDRAAAAAHFGLAESYLQPPTEGEGESFAHDPAWGSDRDSIAAGRPAPEHRRAETRKHMRPGFPDEHHSSSTALFGDRRI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101400

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences