Metagenome / Metatranscriptome Family F101453

Basic Information
Family ID	F101453
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	47 residues
Representative Sequence	AERGPKRPIYKRAPGPVRFSAGDEDGDEEEVRGAHGARQRAAADEHDTA
Number of Associated Samples	90
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.96 %
% of genes near scaffold ends (potentially truncated)	91.18 %
% of genes from short scaffolds (< 2000 bps)	96.08 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Most Common Taxonomy
Group	Unclassified (73.529 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil (39.216 % of family members)
Environment Ontology (ENVO)	Unclassified (49.020 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.882 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF03358	FMN_red	0.98
PF13546	DDE_5	0.98
PF13340	DUF4096	0.98
PF00076	RRM_1	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.53 %
All Organisms	root	All Organisms	26.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.53 %
cellular organisms	root	All Organisms → cellular organisms	26.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.53 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.53 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	17.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.53 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	17.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.53 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	17.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.53 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	17.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005167\|Ga0066672_10329184	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	996	Open in IMG/M
3300005171\|Ga0066677_10161356	Not Available	1234	Open in IMG/M
3300005295\|Ga0065707_10430456	Not Available	821	Open in IMG/M
3300005552\|Ga0066701_10691372	Not Available	613	Open in IMG/M
3300005559\|Ga0066700_10915262	Not Available	582	Open in IMG/M
3300005844\|Ga0068862_102613573	Not Available	517	Open in IMG/M
3300006032\|Ga0066696_11051941	Not Available	518	Open in IMG/M
3300006196\|Ga0075422_10308109	Not Available	680	Open in IMG/M
3300006796\|Ga0066665_10979232	Not Available	650	Open in IMG/M
3300006844\|Ga0075428_100480599	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1330	Open in IMG/M
3300007255\|Ga0099791_10083016	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1462	Open in IMG/M
3300009012\|Ga0066710_103280020	Not Available	619	Open in IMG/M
3300009090\|Ga0099827_11586680	Not Available	570	Open in IMG/M
3300009094\|Ga0111539_10843680	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1066	Open in IMG/M
3300010038\|Ga0126315_10105737	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1620	Open in IMG/M
3300010081\|Ga0127457_1045590	Not Available	1833	Open in IMG/M
3300010089\|Ga0127454_1023533	Not Available	655	Open in IMG/M
3300010092\|Ga0127468_1079360	Not Available	722	Open in IMG/M
3300010101\|Ga0127481_1131717	Not Available	514	Open in IMG/M
3300010102\|Ga0127453_1083214	Not Available	866	Open in IMG/M
3300010103\|Ga0127500_1041907	Not Available	807	Open in IMG/M
3300010106\|Ga0127472_1074686	Not Available	1196	Open in IMG/M
3300010141\|Ga0127499_1097047	Not Available	1090	Open in IMG/M
3300010323\|Ga0134086_10145635	Not Available	862	Open in IMG/M
3300010323\|Ga0134086_10227910	Not Available	703	Open in IMG/M
3300010326\|Ga0134065_10482632	Not Available	513	Open in IMG/M
3300010335\|Ga0134063_10438678	Not Available	645	Open in IMG/M
3300010366\|Ga0126379_11923131	Not Available	695	Open in IMG/M
3300010373\|Ga0134128_13119437	Not Available	509	Open in IMG/M
3300010398\|Ga0126383_11264561	Not Available	828	Open in IMG/M
3300011271\|Ga0137393_10894526	Not Available	758	Open in IMG/M
3300012199\|Ga0137383_10670198	Not Available	758	Open in IMG/M
3300012207\|Ga0137381_10110981	All Organisms → cellular organisms → Bacteria	2334	Open in IMG/M
3300012209\|Ga0137379_10164771	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	2128	Open in IMG/M
3300012224\|Ga0134028_1266945	Not Available	653	Open in IMG/M
3300012349\|Ga0137387_11320337	Not Available	504	Open in IMG/M
3300012359\|Ga0137385_11604556	Not Available	514	Open in IMG/M
3300012362\|Ga0137361_11255121	Not Available	665	Open in IMG/M
3300012364\|Ga0134027_1126527	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300012373\|Ga0134042_1008126	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1067	Open in IMG/M
3300012373\|Ga0134042_1036506	Not Available	957	Open in IMG/M
3300012373\|Ga0134042_1059674	Not Available	855	Open in IMG/M
3300012376\|Ga0134032_1039676	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1396	Open in IMG/M
3300012376\|Ga0134032_1131126	Not Available	620	Open in IMG/M
3300012380\|Ga0134047_1178764	Not Available	651	Open in IMG/M
3300012382\|Ga0134038_1099413	Not Available	643	Open in IMG/M
3300012382\|Ga0134038_1262521	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	827	Open in IMG/M
3300012383\|Ga0134033_1036716	Not Available	566	Open in IMG/M
3300012383\|Ga0134033_1101354	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1126	Open in IMG/M
3300012391\|Ga0134035_1093969	Not Available	524	Open in IMG/M
3300012393\|Ga0134052_1073609	Not Available	651	Open in IMG/M
3300012393\|Ga0134052_1321888	Not Available	599	Open in IMG/M
3300012395\|Ga0134044_1309446	Not Available	545	Open in IMG/M
3300012396\|Ga0134057_1062502	Not Available	899	Open in IMG/M
3300012400\|Ga0134048_1182405	All Organisms → cellular organisms → Bacteria	1892	Open in IMG/M
3300012400\|Ga0134048_1387782	Not Available	657	Open in IMG/M
3300012402\|Ga0134059_1249323	Not Available	609	Open in IMG/M
3300012402\|Ga0134059_1333837	Not Available	963	Open in IMG/M
3300012403\|Ga0134049_1281510	Not Available	654	Open in IMG/M
3300012404\|Ga0134024_1081241	Not Available	521	Open in IMG/M
3300012404\|Ga0134024_1144292	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1839	Open in IMG/M
3300012406\|Ga0134053_1153876	Not Available	1859	Open in IMG/M
3300012406\|Ga0134053_1337653	Not Available	592	Open in IMG/M
3300012407\|Ga0134050_1268674	Not Available	1555	Open in IMG/M
3300012409\|Ga0134045_1192538	Not Available	2025	Open in IMG/M
3300012469\|Ga0150984_100767585	Not Available	2059	Open in IMG/M
3300012582\|Ga0137358_10743919	Not Available	655	Open in IMG/M
3300012944\|Ga0137410_10259543	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1364	Open in IMG/M
3300015374\|Ga0132255_105771907	Not Available	524	Open in IMG/M
3300019249\|Ga0184648_1143986	Not Available	529	Open in IMG/M
3300025972\|Ga0207668_11490732	Not Available	610	Open in IMG/M
3300026118\|Ga0207675_100416764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1326	Open in IMG/M
3300026296\|Ga0209235_1226541	Not Available	598	Open in IMG/M
3300026524\|Ga0209690_1253685	Not Available	553	Open in IMG/M
3300026548\|Ga0209161_10563614	Not Available	509	Open in IMG/M
3300027169\|Ga0209897_1019069	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300027750\|Ga0209461_10091176	Not Available	679	Open in IMG/M
3300027954\|Ga0209859_1029117	Not Available	934	Open in IMG/M
3300028608\|Ga0247819_10695199	Not Available	621	Open in IMG/M
3300028878\|Ga0307278_10404055	Not Available	600	Open in IMG/M
3300028889\|Ga0247827_10805831	Not Available	622	Open in IMG/M
3300030571\|Ga0247652_1000746	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1496	Open in IMG/M
3300030574\|Ga0247648_1004644	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1382	Open in IMG/M
3300030608\|Ga0247651_10008424	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1302	Open in IMG/M
3300030610\|Ga0247613_10324104	Not Available	589	Open in IMG/M
3300030903\|Ga0308206_1015393	Not Available	1217	Open in IMG/M
3300030903\|Ga0308206_1061915	Not Available	768	Open in IMG/M
3300030904\|Ga0308198_1024177	Not Available	833	Open in IMG/M
3300031092\|Ga0308204_10102307	Not Available	791	Open in IMG/M
3300031093\|Ga0308197_10100263	Not Available	856	Open in IMG/M
3300031096\|Ga0308193_1028531	Not Available	759	Open in IMG/M
3300031125\|Ga0308182_1003971	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300031548\|Ga0307408_100391338	Not Available	1191	Open in IMG/M
3300031562\|Ga0310886_10511700	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	726	Open in IMG/M
3300031820\|Ga0307473_11448691	Not Available	519	Open in IMG/M
3300031995\|Ga0307409_102946784	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300032005\|Ga0307411_10179975	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1604	Open in IMG/M
3300032180\|Ga0307471_100551820	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1307	Open in IMG/M
3300032205\|Ga0307472_101884799	Not Available	596	Open in IMG/M
3300034643\|Ga0370545_028251	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300034644\|Ga0370548_023479	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300034680\|Ga0370541_008558	Not Available	994	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.24%
Host-Associated	Host-Associated	11.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.25%
Plants	Host-Associated → Plants	11.76%
Aquatic	Environmental → Aquatic	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.94%
Freshwater	Environmental → Aquatic → Freshwater	0.98%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.88%
Sand	Environmental → Terrestrial → Soil → Sand	1.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.98%
Loam	Environmental → Terrestrial → Soil → Loam	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.98%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	65.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.88%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.94%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	39.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.96%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.96%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.98%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.98%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010081	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010089	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010092	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010101	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010102	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010103	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010106	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010141	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012224	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012376	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012382	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012383	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012391	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012395	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012404	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012407	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027169	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027954	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes)	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030571	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb5 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030574	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030608	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb4 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030610	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Ab2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031096	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031125	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_153 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066672_103291843	3300005167	Soil	AERGPKRPIYKRAPGPVRFSAGDEDGDEEEVHGAYGARHRADADAHDPA*
Ga0066677_101613561	3300005171	Soil	PVKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEVHDAYGARHRADADAHDPA*
Ga0065707_104304561	3300005295	Switchgrass Rhizosphere	AHAERGPKRPIYKRAPGPVRFSTGDEDGDEEEGRGAYGARHRADADAHDPA*
Ga0066701_106913721	3300005552	Soil	KRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEVRGAYGARHRADADAPDPA*
Ga0066700_109152621	3300005559	Soil	KRAAHAERGPKRPIYKRAPGPVRFSAGDDDGDEEEGHGAHGARRRADTGEHDPA*
Ga0068862_1026135731	3300005844	Switchgrass Rhizosphere	AKGERGPKRPIYKRTTGPVRFSATEDDGDEEVRGAYEARRRADAGEHDPA*
Ga0066696_110519411	3300006032	Soil	AHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEVRGAYGARHRADADAHDPA*
Ga0075422_103081092	3300006196	Populus Rhizosphere	RATPAERGPKRPIYKRAPGPVRFSARDEDRDEEEVRGPHGARHRADAVAHDTA*
Ga0066665_109792321	3300006796	Soil	RGPKRPMYKRAAGPVRFSAEDDDGDEEEVPGAHGARRRADAGEHDTA*
Ga0075428_1004805993	3300006844	Populus Rhizosphere	AERGPKRPIYKRAPGPGRFSARDEDGDEEGRGAYGARHRADADAHDPA*
Ga0099791_100830161	3300007255	Vadose Zone Soil	RPLYKRAPGPVRFSAGDEDGDEEEVRGAYGARHRADADAHDPA*
Ga0066710_1032800201	3300009012	Grasslands Soil	KRDGHAEPGPKRPIYTRAPGPVRFSVGDEDGDEEEVHGAPGVCQRADEHDTT
Ga0099827_115866801	3300009090	Vadose Zone Soil	HPIYKRAPGPVRFSAGDEDGDEEEVRGARGARQRADADEHDTA*
Ga0111539_108436803	3300009094	Populus Rhizosphere	RPPVKRAAHAERGPKRPIYKRAPGPVRFSARDEDRDEEEVRGPHGARHRADAVAHDTA*
Ga0126315_101057375	3300010038	Serpentine Soil	GPKRPMYKRVPGPVRFSTGDDDGDEEEMRGAHGARHRIAD*
Ga0127457_10455904	3300010081	Grasslands Soil	AVHAERGPKRPIYKRAPGPVRFSVGDEDGDEEEVHGAPGVRQRADEHDTT*
Ga0127454_10235332	3300010089	Grasslands Soil	GPVRFSAGDEDGDEEEVRGAYGARHRADADAHDPA*
Ga0127468_10793601	3300010092	Grasslands Soil	LKRPIYKRAPGPVRFSVGDEDGDEEEVHGAPGVRQRADEHDTT*
Ga0127481_11317172	3300010101	Grasslands Soil	AAHAERGPKRPIYKRAPGPVRFSVGDEDGDEEEVHGAPGVRQRADEHDTT*
Ga0127453_10832141	3300010102	Grasslands Soil	PKRPIYKRAPGPVRFSVGDEDGDEEEVHGAPGVRQRADEHDTT*
Ga0127500_10419071	3300010103	Grasslands Soil	RAVHAERGPKRPIYKRAPGPVRFSVGDEDGDEEEVHGAPGVRQRADEHDTT*
Ga0127472_10746861	3300010106	Grasslands Soil	AKRAVHAERGPKRPIYKRAPGPVRFSVGDEDGDEEEVRGAHGARQRAAADEHDTA*
Ga0127499_10970471	3300010141	Grasslands Soil	KRPIYKRTPGPVRFSAGDEDGAEEEERTAHGARQRADADEYDTA*
Ga0134086_101456352	3300010323	Grasslands Soil	PGPVRFSAGDEDGDEEEGRGAHGARRRADADAHDTA*
Ga0134086_102279102	3300010323	Grasslands Soil	ERGPKRPIYKRAPGPVRFSAGDEEEVRGAYGARHRADADAHDPA*
Ga0134065_104826322	3300010326	Grasslands Soil	RRRTPAKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEEVRGAHGARQRADAHDTA*
Ga0134063_104386781	3300010335	Grasslands Soil	GPKRPIYKRAPGPVRFSVGDEDGDEEEVHGAPGVRQRADEHDTT*
Ga0126379_119231311	3300010366	Tropical Forest Soil	KPAAKDLCYKRATGPVRFSPGDEDGDDEEERGAHGARRRADAGEPDTA*
Ga0134128_131194371	3300010373	Terrestrial Soil	MYKRAAGPVRFSAEDDDSDEEEVRGAHGARRRADAGEHDTV*
Ga0126383_112645612	3300010398	Tropical Forest Soil	MYKRVPGPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV*
Ga0137393_108945263	3300011271	Vadose Zone Soil	YKRAPGPVRFSAGDEDGDEEEVRGADGARHRADADAHDPA*
Ga0137383_106701981	3300012199	Vadose Zone Soil	MYKRAAGPVRFSAEDDDGDEEEVPGAHGARRRADAGEHDTA*
Ga0137381_101109814	3300012207	Vadose Zone Soil	AGPVRFSAEDDDGDEEEVPGAHGARRRADADEHDTA*
Ga0137379_101647711	3300012209	Vadose Zone Soil	PAKRAAHADHGPKRPMYKRAAGPVRFSAEDDDGDEEEMRGAHGARHRTDAAEHDTV*
Ga0134028_12669453	3300012224	Grasslands Soil	VHAERGPKRPIYKRAPGPVRFSVGDEDGDEEEVHGAPGVRQRADEHDTT*
Ga0137387_113203371	3300012349	Vadose Zone Soil	KRPMYKRAPGPVRFSAGDEDGDEEEGRSAHGARQRADADEYDTA*
Ga0137385_116045561	3300012359	Vadose Zone Soil	KRPMYKRTPGPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV*
Ga0137361_112551211	3300012362	Vadose Zone Soil	MYKRAAGPVRFGAGDEDGDEEEVRGAHGARRRADAGEHDTA*
Ga0134027_11265271	3300012364	Grasslands Soil	IYKRTPGPVRFSAGDDDSDEEEVHDAHGARQRADADEHDTA*
Ga0134042_10081263	3300012373	Grasslands Soil	CPMYKRAPGPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV*
Ga0134042_10365061	3300012373	Grasslands Soil	AERGPKRPIYKRAPGPVRFSVGDEDGDEEEVHGAPGVRQRADEHDTT*
Ga0134042_10596743	3300012373	Grasslands Soil	PIYKRAPGPVRFSAGDEDGDEEEEVRGAHGARQRADEHDTA*
Ga0134032_10396761	3300012376	Grasslands Soil	GPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV*
Ga0134032_11311263	3300012376	Grasslands Soil	KRPIYKRAPGPVRFSAGDEDSDEEEVRGAHGARQRAAADEHDTA*
Ga0134047_11787641	3300012380	Grasslands Soil	PIYKRAPGPVRFSAGDEDGDEEEVRGAHGARQRAAADEHDTA*
Ga0134038_10994133	3300012382	Grasslands Soil	HAERGPKRPIYKRAPGPVRFSVGDEDGDEEEVHGAPGVRQRADEHDTT*
Ga0134038_12625211	3300012382	Grasslands Soil	RPPAKRAAPAERGPKRPMYKRAPGPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV*
Ga0134033_10367161	3300012383	Grasslands Soil	IYKRAPGPVRFSAGDEDGDEEEVRGAHGARQRAAADEHDTA*
Ga0134033_11013541	3300012383	Grasslands Soil	RRPPVKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEVHGAYGARHRADADAHDPA*
Ga0134035_10939691	3300012391	Grasslands Soil	PIYKRAPGSVRFSAGDEDGDEEEVRGAYGARHRADADAHDPA*
Ga0134052_10736092	3300012393	Grasslands Soil	AKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEVRGAYGARHRADADAPDPA*
Ga0134052_13218881	3300012393	Grasslands Soil	GPVRFSAGDEDGDEEEVRGAHGARQRAAADEHDTA*
Ga0134044_13094461	3300012395	Grasslands Soil	AERGPKRPIYKRAPGPVRFSAGDEDGDEEEVRGAYGARHRADADAHDPA*
Ga0134057_10625023	3300012396	Grasslands Soil	RPIYKRAPGPVRFSAGDEDGDEEEGRSAHGARQRADADEYDTA*
Ga0134048_11824051	3300012400	Grasslands Soil	RRPPALRAAHAERGPKRPIYKRTPGPVRFSAGDDDSDEEEVHDAHGARQRADADEHDTA*
Ga0134048_13877821	3300012400	Grasslands Soil	RPIYKRAPGPVRFSAGDEDGDEEEVRGAYGARHRADADAHDPA*
Ga0134059_12493231	3300012402	Grasslands Soil	HAERGPKRPIYKRAPGPVRFSAGDEDGDEEEVRSAYGARHRADADAHDPT*
Ga0134059_13338373	3300012402	Grasslands Soil	YKRAPGPVRFSAGDEDGDEEEGRSAHGARQRADADEYDTA*
Ga0134049_12815101	3300012403	Grasslands Soil	PKRPIYKRAPGPVRFSVGDEDGDEEEVRGAHGARQRAAADEHDTA*
Ga0134024_10812411	3300012404	Grasslands Soil	RPIYKRAPGPVRFSAGDEDGDEEEVRGAHGARQRAAADEHDTA*
Ga0134024_11442921	3300012404	Grasslands Soil	KRAPGPVRFSAGDEDGDEEEVRGAYGARHRADADAHDPA*
Ga0134053_11538761	3300012406	Grasslands Soil	KAERGPKRPIYKRVPGPVRFSATDDDGDEEEVRGAHGASQHADADEHDTA*
Ga0134053_13376533	3300012406	Grasslands Soil	AERGPKRPIYKRAPGPVRFSAGDEDGDEEEVRGAHGARQRAAADEHDTA*
Ga0134050_12686745	3300012407	Grasslands Soil	RAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEVRGAHGARQRAAADEHDTA*
Ga0134045_11925381	3300012409	Grasslands Soil	YKRAPGPVRFSAGDEDGDEEEVRGAYGARHRADADAPDPA*
Ga0150984_1007675855	3300012469	Avena Fatua Rhizosphere	PAKRAAPAERGPKRPIYKRAPGPVRFSVGDEDGDEEEVHGAPGVRQRADAHDTA*
Ga0137358_107439192	3300012582	Vadose Zone Soil	AKAERGPKRPIYKRAPGPVRFSAGDDDGEEEEVRGTHGASQRAEADEPDTT*
Ga0137410_102595431	3300012944	Vadose Zone Soil	RRRPPAKRAAHAERGPKRPIYKRAPGPGRFSAGDEDGDEEEVRGADGARHRADADAHDPA
Ga0132255_1057719072	3300015374	Arabidopsis Rhizosphere	MYKRAPGPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV*
Ga0184648_11439861	3300019249	Groundwater Sediment	PIYKRVPGPVRFSAGDDDGDEGEVRGAHGASQRVDADEPDTT
Ga0207668_114907322	3300025972	Switchgrass Rhizosphere	AKRAAPAERGPKRPMYKRAPGPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV
Ga0207675_1004167643	3300026118	Switchgrass Rhizosphere	RGAKGERGPKRPIYKRTTGPVRFSATEDDGDEEVRGAYEARRRADAGEHDPA
Ga0209235_12265411	3300026296	Grasslands Soil	GMRGPKRPIYKRAPGSVRFSAGDEDGDEEEVRGAYGARHRADADAHDPA
Ga0209690_12536851	3300026524	Soil	PKRPIYKRAPGPVRFSAGDEDGDEEEVRGAYGARHRADADAHDPA
Ga0209161_105636142	3300026548	Soil	RRTPGKRAAHAERGPKRPVYKRAPGPGRFSAGDEDGDEEEVRGAYGARHRADADAPDPA
Ga0209897_10190691	3300027169	Groundwater Sand	AGPVRFSAVDDDGDEEEEHGAHGTQRRAAAGEHDTA
Ga0209461_100911763	3300027750	Agave	MYKRAPGPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV
Ga0209859_10291171	3300027954	Groundwater Sand	KRAAGPVRFSAGDEDGNEEVRGAHGARRRADAGEHDTA
Ga0247819_106951991	3300028608	Soil	IYKRAAGPVRFSTGDEDGDEEERDAHGARRRADAGEHDTA
Ga0307278_104040553	3300028878	Soil	PPAKRAARAERGPKRSIYKRAPGPVRFSAGDEDGDEEEGRGAHGARQRADADEHDTA
Ga0247827_108058312	3300028889	Soil	AERGPKRPMYKRAPGPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV
Ga0247652_10007461	3300030571	Soil	PPAKRAAPAERGPKRPMYKRAPGPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV
Ga0247648_10046441	3300030574	Soil	PAKRAAPAERGPKRPMYKRAPGPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV
Ga0247651_100084244	3300030608	Soil	PGPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV
Ga0247613_103241041	3300030610	Soil	MYKRAPGPARFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV
Ga0308206_10153934	3300030903	Soil	HAERGPKRPIYKRALEPGRFSAGDGEGDEEEGRGDHGAPDRTDATEDDTG
Ga0308206_10619151	3300030903	Soil	IYKRAPGPVRFSAGDEDGDEEEGHGAHGARRRADTGEHDPA
Ga0308198_10241772	3300030904	Soil	APAKRAAQAERGPKHPMYKRAAGPVRFGAGDEDGDEEEVRGAHGARRRADAGEHDTA
Ga0308204_101023071	3300031092	Soil	GPVRFSAGDEDEDGDEEEVRGAHGASQRADADEPDTT
Ga0308197_101002633	3300031093	Soil	AAKAERGPKRPMYKRAPGPVRFSAGDDDGDEEEERGAHGARQRADADEHDTA
Ga0308193_10285314	3300031096	Soil	VRFSAGDDDADGDEEEVRGAHGASQRADADEPDTT
Ga0308182_10039713	3300031125	Soil	RRPPAKRAAKAERGPKRPMYKRAPGPVRFSAGDDDGDEEEERGAHGARQRADADEHDTA
Ga0307408_1003913381	3300031548	Rhizosphere	IYKRAPGPVRFSAGDEGGDEEEEVRGAHGARQRADADAHDTA
Ga0310886_105117001	3300031562	Soil	KHPLYKRAAGPVRFSTGDEDGDEEEERGAHGARRRADAGEHDTA
Ga0307473_114486912	3300031820	Hardwood Forest Soil	HAERGPKRPIYKRAPGPVRFSAGDEDGDEEEVRGAYGARHRADADAHDPA
Ga0307409_1029467841	3300031995	Rhizosphere	MYKRAPGPVRFSTGDNDGDEEEMRGAYGARHRTDAAEHDTV
Ga0307411_101799751	3300032005	Rhizosphere	YKRAPGPVRFSTGDNDGDEEEMRGAYGARHRTDAAEHDTV
Ga0307471_1005518204	3300032180	Hardwood Forest Soil	RRRPPAKRAAPAERGPKRPMYKRAPGPVRFSTGDDDGDEEEMRGAHGARHRTDAAEHDTV
Ga0307472_1018847991	3300032205	Hardwood Forest Soil	PVKRAAHAERGPKRPIYKRAPGPVRFSAGDEDGDEEEVRGAYGARHRADADAHDPA
Ga0370545_028251_817_942	3300034643	Soil	MYKRTAGPVRFSAEDDDGDEEEVPGAHGARRRADAGEPDTA
Ga0370548_023479_725_850	3300034644	Soil	MYKRAPGPVRFSAGDDDGDEEEERGAHGARQRADADEHDTA
Ga0370541_008558_1_129	3300034680	Soil	PIYKRAPGPVRFSAGDEDSEEEEVRGARGARQRADADEHDTA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101453

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign